Prupe.1G453100_v2.0.a1

Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0010492
Physical Location & Seq
Reverse (-)
38085864 .. 38092286
6423 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G453100.1

Sequence Viewer

Length: 2532 bp
ATGGCTCCTCCGCCACAGTCTCAGCGATCTTCGTCACCGTCTCAGCCTTCCGGAAAAGGCGAAGTTGCCGATGTGAAATCACAGCTCCGGAATCTAGCCGGCAGCCGGGCTCCAGGAGTAGATGATTCAAAGCGGGAGTTATTCAAGAAGGTTATCTCTTACATGACAATCGGCATTGATGTCTCTTCTGTCTTTGGCGAGATGGTCATGTGTTCAGCAACATCAGATATCGTTTTGAAGAAAATGTGTTATCTCTACGTTGGGAATTATGCAAAGGTCAATCCGGACCTTGCACTTCTGACGATCAATTTTCTTCAAAGAGATTGCAAGGATGCGGACCCAATGATCCGAGGACTTGCATTGAGGAGCTTGTGTTCGCTGCGGGTGGCAAACCTGGTGGAGTATTTGGTGGGGCCCTTGGGTGCAGGTTTGAAGGACAATAATAGCTATGTGAGGATGATAGCAGTTATGGGGGTTCTCAAATTGTATCATATATCAGCTTCAACTTGTGTTGATGCAGATTTCCCAGCAATGCTTAAGCATTTGTTGCTTAATGACCGTGATACACAGGTGGTTGCAAATTGTTTGTCTGCCTTACAAGAGATTTGGAGCTTAGAAGGAAGCACGTCCGAGGAAGTATCCAGGGAGAGAGAAATTTTGCTCAGCAAGCCAGTTATATATTATCTTTTGAATAGGATCAGGGAGTTTAGTGAATGGGCACAATGTCTTGTACTTGAGTTGGTAGGTAAATATGTACCTGCAGATAGCAGTGAGATATTTGATGTCATGAATCTGCTCGAGGATAGACTTCAGCATGCAAATGGTGCTGTTGTCTTAGCAACCACAAAAGTATTTCTTCAATTGACTCTGTCAATGACTGATGTTCATCAGCAGGTATATGAACGCATTAAAGCTCCTCTCCTGACCTTAGTGAGTTCGGGAAGTCCAGAGCAATCTTATGCAGTTCTAAGCCACCTGCATCTTTTGGTGACTCGTGCACCATTCATATTTTCTTCAGACTATAAACACTTCTATTGCCAGTACAATGAGCCATCTTATGTTAAAAAGTTGAAGCTTGAGATGTTGACTGCAGTGGCAAATGAGAGCAACACTTATGAAATTGTGACGGAATTATGTGAATATGCTGCAAATGTTGATATTCCCATTGCAAGAGAGTCAATCCGTGCAGTTGGGAAAATAGCTCTACAACAGTATGATGTGAATGCAATTGTTGATCGGCTTCTTCAATTTCTGGAGATGGAAAAGGACTATGTAACTGCTGAAGCTCTGGTTCTTGTAAAAGATCTGCTGAGGAAATATCCACAATGGAGTCATGATTGCATTGCAGTTGTTGGGAACATCAGCAGCAAAAATGTTCAAGAACCCAAGGCCAAGGCAGCTCTTATATGGATGCTTGGGGAGTATTCTCAGGAAATGCAGGACGCACCTTATATTTTAGAGAGTTTGATTGAAAATTGGGAGGATGAGCATTCGGCTGAGGTTCGCTTACATCTACTCACAGCAGTAATGAAGTGCTTTTTTAAGAGGCCACCTGAGACTCAGAAATCCTTGGGAGCTGCACTGGCTGCAGGTCTTGCTGATTTTCACCAGGATGTTCATGATAGAGCGTTGTTCTACTACAGGCTTTTGCAATATGACATGAGTACAGCAGAACAAGTGGTGAACCCTCCAAAGCAAGCTGTTTCTGTCTTTGCTGATACCCAGAGCAGTGAAATCAAAGATCGGATATTTGATGAATTTAACAGTTTGTCTGTTGTATATCAGCAGCCATCGTACATGTTTACTTATAAGGAACACAGAGGGCCCTTTGAGTTTTCAGACGAAATTGGAAATTTATCTATTGGGACAGAATCTGCAGATACTGTTGCTCAAGCTCATAGAGTTGAGGCAAATGATAAGGATCTTCTTTTAAGTACCTCGGAGAAGGAAGAGACAAGAGGTCTCAATAACAATTCTTCTGCATATAGTGCTCCTTCATATGATGTTTCGTCAGTGCCTGTTCCCACTTCTCAAATGTCAGAGTTGGCGATTTCAAATCCCTCGGTGCCAGGAAATGCTCCACAGTCTGGCTTTGCAATTGATGATCTACTTGGCTTGGGTCTACCTGCTGCACCTGCGCCTGCACCTTCACCTCCTCCTTTGAAGCTTAACCCAAAAGCTGTTCTGGATCCAACCACTTTTCAGCAGAAATGGCGCCAACTGCCGATATCGTTATCACAGGAGTATTCTATTACGCCTGAAGGAGTTGCAGCATTGACAACGCCTCAAGCACTCCTGCGGCATATGCAAGGCCAAGCCATTCACTGCATTGCATCCGGTGGCCAATCCCCCAACTTCAAGTTTTTCTTCTTTGCACAAAAGGCAGAAGAATCTTCTACATTTTTGGTAGAGTGTATAGTCAACACATCATCCGCCAAAGCTCAAATAAAGATTAAAGCCGATGATCAAAGTGCAACCCAGCCCTTTTCATCCGTGTTCCAATCTGCCTTGTCCAAATTCGGCATGCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005515 GO:0019899 GO:0019900 GO:0019901 GO:0043424
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Adaptin_N B2-adapt-app_C

Protein Analysis

844

Amino Acids

93.37

Weight (kDa)

5.31

Isoelectric Point (pI)

46.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010492)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G11490 AT5G11490 AT5G11490
fragaria_vesca FvH4_2g36170 FvH4_2g36170 FvH4_2g36170
malus_domestica MD08G1118900.v1.1 MD15G1098200.v1.1
prunus_persica Prupe.1G453100_v2.0.a1
pyrus_communis pycom08g09930 pycom15g09000
rosa_chinensis RchiOBHm_Chr6g0305701
rosa_laevigata RLG00000010867
rosa_multiflora Rmu_sc0001809.1_g000035
rosa_roxburghii Rroxscaffold_7G00162430
rosa_rugosa Rorug06G0343300
rosa_samantha Rh6AG454800 Rh6BG446700 Rh6CG468700 Rh6DG455300
rosa_wichuraiana Rw6G039660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1809
AarI CACCTGC 2 cut(s) 984, 2143
Acc36I ACCTGC 7 cut(s) 416, 766, 883, 984, 1580, 2134, 2143
AccB1I GGYRCC 2 cut(s) 2065, 2214
AccB7I CCANNNNNTGG 1 cut(s) 2087
AccI GTMKAC 1 cut(s) 2122
AccIII TCCGGA 3 cut(s) 50, 87, 283
AciI CCGC 6 cut(s) 11, 133, 335, 382, 2299, 2433
AclWI GGATC 5 cut(s) 340, 704, 1929, 2183, 2196
AcoI YGGCCR 1 cut(s) 2341
AcsI RAATTY 4 cut(s) 654, 1757, 1852, 2516
AcuI CTGAAG 4 cut(s) 794, 999, 1302, 2280
AcyI GRCGYC 1 cut(s) 2215
AfaI GTAC 6 cut(s) 732, 756, 1043, 1666, 1796, 1936
AfiI CCNNNNNNNGG 2 cut(s) 105, 2087
AflII CTTAAG 1 cut(s) 536
AflIII ACRYGT 1 cut(s) 1797
AhdI GACNNNNNGTC 1 cut(s) 1959
AjiI CACGTC 1 cut(s) 627
AjnI CCWGG 5 cut(s) 112, 393, 641, 1608, 2068
AloI GAACNNNNNNTCC 2 cut(s) 358, 390
Alw21I GWGCWC 2 cut(s) 1000, 1993
Alw26I GTCTC 6 cut(s) 24, 45, 187, 1550, 1946, 1967
Alw44I GTGCAC 1 cut(s) 996
AlwI GGATC 5 cut(s) 340, 704, 1929, 2183, 2196
AlwNI CAGNNNCTG 3 cut(s) 1874, 1883, 2018
Ama87I CYCGRG 1 cut(s) 797
Aor13HI TCCGGA 3 cut(s) 50, 87, 283
AoxI GGCC 6 cut(s) 413, 1389, 1547, 1823, 2311, 2341
ApaI GGGCCC 2 cut(s) 417, 1827
ApaLI GTGCAC 1 cut(s) 996
ApoI RAATTY 4 cut(s) 654, 1757, 1852, 2516
ArsI GACNNNNNNTTYG 2 cut(s) 572, 604
AspLEI GCGC 2 cut(s) 2140, 2217
AspS9I GGNCC 6 cut(s) 286, 337, 413, 414, 1823, 1824
AsuC2I CCSGG 1 cut(s) 107
AsuHPI GGTGA 5 cut(s) 27, 1000, 1598, 1693, 2142
AvaI CYCGRG 1 cut(s) 797
AvaII GGWCC 2 cut(s) 286, 337
BaeGI GKGCMC 4 cut(s) 417, 721, 1000, 1827
BaeI ACNNNNGTAYC 2 cut(s) 555, 588
BalI TGGCCA 1 cut(s) 2343
BamHI GGATCC 1 cut(s) 2188
BanI GGYRCC 2 cut(s) 2065, 2214
BanII GRGCYC 3 cut(s) 112, 417, 1827
BauI CACGAG 1 cut(s) 993
Bbv12I GWGCWC 2 cut(s) 1000, 1993
BbvCI CCTCAGC 2 cut(s) 1310, 1497
BccI CCATC 4 cut(s) 196, 1060, 1252, 1798
BciT130I CCWGG 5 cut(s) 114, 395, 643, 1610, 2070
BciVI GTATCC 1 cut(s) 649
BclI TGATCA 1 cut(s) 2464
BcnI CCSGG 1 cut(s) 107
BcoDI GTCTC 6 cut(s) 24, 45, 187, 1550, 1946, 1967
BfaI CTAG 1 cut(s) 95
BfmI CTRYAG 5 cut(s) 759, 1089, 1587, 1639, 1875
BfoI RGCGCY 1 cut(s) 2218
BfrI CTTAAG 1 cut(s) 536
BfuAI ACCTGC 7 cut(s) 416, 766, 883, 984, 1580, 2134, 2143
BfuI GTATCC 1 cut(s) 649
BglII AGATCT 1 cut(s) 1303
BlpI GCTNAGC 1 cut(s) 662
Bme1390I CCNGG 6 cut(s) 107, 114, 395, 643, 1610, 2070
Bme18I GGWCC 2 cut(s) 286, 337
BmeRI GACNNNNNGTC 1 cut(s) 1959
BmeT110I CYCGRG 1 cut(s) 797
BmgBI CACGTC 1 cut(s) 627
BmgT120I GGNCC 6 cut(s) 286, 337, 413, 414, 1823, 1824
BmiI GGNNCC 9 cut(s) 6, 111, 339, 414, 415, 1825, 2067, 2190, 2216
BmrFI CCNGG 6 cut(s) 107, 114, 395, 643, 1610, 2070
BmsI GCATC 5 cut(s) 322, 505, 988, 1401, 2342
BpmI CTGGAG 2 cut(s) 96, 1274
Bpu10I CCTNAGC 2 cut(s) 1310, 1497
Bpu1102I GCTNAGC 1 cut(s) 662
BpuEI CTTGAG 4 cut(s) 755, 1097, 1875, 2271
BpuMI CCSGG 1 cut(s) 107
BsaBI GATNNNNATC 2 cut(s) 885, 1920
BsaHI GRCGYC 1 cut(s) 2215
BsaI GGTCTC 1 cut(s) 1967
BsaJI CCNNGG 9 cut(s) 349, 417, 630, 642, 1386, 1392, 1569, 1938, 2061
BsaWI WCCGGW 4 cut(s) 50, 87, 283, 2336
BsaXI ACNNNNNCTCC 2 cut(s) 358, 388
Bsc4I CCNNNNNNNGG 2 cut(s) 105, 2087
Bse118I RCCGGY 1 cut(s) 98
Bse1I ACTGG 3 cut(s) 671, 1039, 1587
Bse3DI GCAATG 4 cut(s) 537, 1164, 1341, 2328
Bse8I GATNNNNATC 2 cut(s) 885, 1920
BseAI TCCGGA 3 cut(s) 50, 87, 283
BseBI CCWGG 5 cut(s) 114, 395, 643, 1610, 2070
BseDI CCNNGG 9 cut(s) 349, 417, 630, 642, 1386, 1392, 1569, 1938, 2061
BseGI GGATG 8 cut(s) 337, 462, 1416, 1489, 1618, 2333, 2429, 2489
BseJI GATNNNNATC 2 cut(s) 885, 1920
BseLI CCNNNNNNNGG 2 cut(s) 105, 2087
BseMI GCAATG 4 cut(s) 537, 1164, 1341, 2328
BseMII CTCAG 8 cut(s) 35, 56, 676, 1301, 1442, 1488, 1545, 1574
BseNI ACTGG 3 cut(s) 671, 1039, 1587
BseRI GAGGAG 3 cut(s) 379, 906, 2145
BseSI GKGCMC 4 cut(s) 417, 721, 1000, 1827
BseYI CCCAGC 2 cut(s) 526, 2478
BsgI GTGCAG 5 cut(s) 444, 1206, 1563, 2115, 2127
BshFI GGCC 6 cut(s) 415, 1391, 1549, 1825, 2313, 2343
BshNI GGYRCC 2 cut(s) 2065, 2214
BsiHKAI GWGCWC 2 cut(s) 1000, 1993
BsiHKCI CYCGRG 1 cut(s) 797
BsiSI CCGG 6 cut(s) 51, 88, 99, 106, 284, 2337
BslFI GGGAC 1 cut(s) 1879
BslI CCNNNNNNNGG 2 cut(s) 105, 2087
BsmAI GTCTC 6 cut(s) 24, 45, 187, 1550, 1946, 1967
BsmBI CGTCTC 1 cut(s) 45
BsmFI GGGAC 1 cut(s) 1879
BsmI GAATGC 2 cut(s) 1228, 1489
BsnI GGCC 6 cut(s) 415, 1391, 1549, 1825, 2313, 2343
Bso31I GGTCTC 1 cut(s) 1967
BsoBI CYCGRG 1 cut(s) 797
Bsp120I GGGCCC 2 cut(s) 413, 1823
Bsp1286I GDGCHC 6 cut(s) 112, 417, 721, 1000, 1827, 1993
Bsp13I TCCGGA 3 cut(s) 50, 87, 283
Bsp1720I GCTNAGC 1 cut(s) 662
BspACI CCGC 6 cut(s) 11, 133, 335, 382, 2299, 2433
BspANI GGCC 6 cut(s) 415, 1391, 1549, 1825, 2313, 2343
BspCNI CTCAG 8 cut(s) 34, 55, 675, 1302, 1441, 1489, 1546, 1573
BspEI TCCGGA 3 cut(s) 50, 87, 283
BspHI TCATGA 3 cut(s) 786, 1333, 1618
BspLI GGNNCC 9 cut(s) 6, 111, 339, 414, 415, 1825, 2067, 2190, 2216
BspMAI CTGCAG 4 cut(s) 763, 1093, 1591, 1879
BspMI ACCTGC 7 cut(s) 416, 766, 883, 984, 1580, 2134, 2143
BspPI GGATC 5 cut(s) 340, 704, 1929, 2183, 2196
BspT107I GGYRCC 2 cut(s) 2065, 2214
BspTI CTTAAG 1 cut(s) 536
BspTNI GGTCTC 1 cut(s) 1967
BsrDI GCAATG 4 cut(s) 537, 1164, 1341, 2328
BsrFI RCCGGY 1 cut(s) 98
BsrI ACTGG 3 cut(s) 671, 1039, 1587
BssAI RCCGGY 1 cut(s) 98
BssECI CCNNGG 9 cut(s) 349, 417, 630, 642, 1386, 1392, 1569, 1938, 2061
BssNI GRCGYC 1 cut(s) 2215
BssSI CACGAG 1 cut(s) 993
BssT1I CCWWGG 4 cut(s) 417, 1386, 1392, 1569
Bst2BI CACGAG 1 cut(s) 993
Bst2UI CCWGG 5 cut(s) 114, 395, 643, 1610, 2070
Bst4CI ACNGT 7 cut(s) 18, 39, 560, 1212, 1766, 1885, 2085
Bst6I CTCTTC 2 cut(s) 190, 1944
BstACI GRCGYC 1 cut(s) 2215
BstAFI CTTAAG 1 cut(s) 536
BstAPI GCANNNNNTGC 5 cut(s) 547, 824, 1586, 1595, 1988
BstC8I GCNNGC 6 cut(s) 100, 668, 816, 1698, 2142, 2525
BstF5I GGATG 8 cut(s) 337, 462, 1416, 1489, 1618, 2333, 2429, 2489
BstH2I RGCGCY 1 cut(s) 2218
BstHHI GCGC 2 cut(s) 2140, 2217
BstMAI GTCTC 6 cut(s) 24, 45, 187, 1550, 1946, 1967
BstNI CCWGG 5 cut(s) 114, 395, 643, 1610, 2070
BstNSI RCATGY 3 cut(s) 818, 1801, 2527
BstSCI CCNGG 6 cut(s) 105, 112, 393, 641, 1608, 2068
BstSFI CTRYAG 5 cut(s) 759, 1089, 1587, 1639, 1875
BstSLI GKGCMC 4 cut(s) 417, 721, 1000, 1827
BstX2I RGATCY 3 cut(s) 1303, 1921, 2188
BstYI RGATCY 3 cut(s) 1303, 1921, 2188
BsuI GTATCC 1 cut(s) 649
BsuRI GGCC 6 cut(s) 415, 1391, 1549, 1825, 2313, 2343
BtrI CACGTC 1 cut(s) 627
BtsCI GGATG 8 cut(s) 337, 462, 1416, 1489, 1618, 2333, 2429, 2489
BtsI GCAGTG 4 cut(s) 775, 1098, 1735, 2323
BtsIMutI CAGTG 6 cut(s) 775, 1098, 1580, 1735, 2019, 2323
BveI ACCTGC 7 cut(s) 416, 766, 883, 984, 1580, 2134, 2143
Cac8I GCNNGC 6 cut(s) 100, 668, 816, 1698, 2142, 2525
CaiI CAGNNNCTG 3 cut(s) 1874, 1883, 2018
CciI TCATGA 3 cut(s) 786, 1333, 1618
CfoI GCGC 2 cut(s) 2140, 2217
Cfr10I RCCGGY 1 cut(s) 98
Cfr13I GGNCC 6 cut(s) 286, 337, 413, 414, 1823, 1824
CseI GACGC 1 cut(s) 1451
CsiI ACCWGGT 1 cut(s) 393
Csp6I GTAC 6 cut(s) 731, 755, 1042, 1665, 1795, 1935
CspCI CAANNNNNGTGG 2 cut(s) 378, 413
CviQI GTAC 6 cut(s) 731, 755, 1042, 1665, 1795, 1935
DinI GGCGCC 1 cut(s) 2216
DriI GACNNNNNGTC 1 cut(s) 1959
EaeI YGGCCR 1 cut(s) 2341
Eam1104I CTCTTC 2 cut(s) 190, 1944
Eam1105I GACNNNNNGTC 1 cut(s) 1959
EarI CTCTTC 2 cut(s) 190, 1944
EciI GGCGGA 1 cut(s) 2422
Eco130I CCWWGG 4 cut(s) 417, 1386, 1392, 1569
Eco24I GRGCYC 3 cut(s) 112, 417, 1827
Eco31I GGTCTC 1 cut(s) 1967
Eco32I GATATC 2 cut(s) 229, 2229
Eco47I GGWCC 2 cut(s) 286, 337
Eco57I CTGAAG 4 cut(s) 794, 999, 1302, 2280
Eco88I CYCGRG 1 cut(s) 797
EcoO109I RGGNCCY 4 cut(s) 413, 414, 1823, 1824
EcoRII CCWGG 5 cut(s) 112, 393, 641, 1608, 2068
EcoRV GATATC 2 cut(s) 229, 2229
EcoT14I CCWWGG 4 cut(s) 417, 1386, 1392, 1569
EcoT38I GRGCYC 3 cut(s) 112, 417, 1827
EgeI GGCGCC 1 cut(s) 2216
EheI GGCGCC 1 cut(s) 2216
ErhI CCWWGG 4 cut(s) 417, 1386, 1392, 1569
Esp3I CGTCTC 1 cut(s) 45
FalI AAGNNNNNCTT 4 cut(s) 840, 872, 2351, 2383
FaqI GGGAC 1 cut(s) 1879
FauI CCCGC 2 cut(s) 126, 375
FauNDI CATATG 2 cut(s) 1999, 2304
FbaI TGATCA 1 cut(s) 2464
FblI GTMKAC 1 cut(s) 2122
FokI GGATG 8 cut(s) 344, 469, 1423, 1496, 1625, 2320, 2416, 2476
FriOI GRGCYC 3 cut(s) 112, 417, 1827
FspBI CTAG 1 cut(s) 95
GlaI GCGC 2 cut(s) 2139, 2216
GsaI CCCAGC 2 cut(s) 530, 2482
GsuI CTGGAG 2 cut(s) 96, 1274
HaeII RGCGCY 1 cut(s) 2218
HaeIII GGCC 6 cut(s) 415, 1391, 1549, 1825, 2313, 2343
HapII CCGG 6 cut(s) 51, 88, 99, 106, 284, 2337
HgaI GACGC 1 cut(s) 1451
HhaI GCGC 2 cut(s) 2140, 2217
Hin1I GRCGYC 1 cut(s) 2215
Hin6I GCGC 2 cut(s) 2138, 2215
HinP1I GCGC 2 cut(s) 2138, 2215
HincII GTYRAC 2 cut(s) 1086, 2422
HindII GTYRAC 2 cut(s) 1086, 2422
HindIII AAGCTT 2 cut(s) 1073, 2165
HpaII CCGG 6 cut(s) 51, 88, 99, 106, 284, 2337
HphI GGTGA 5 cut(s) 27, 1000, 1598, 1693, 2142
Hpy166II GTNNAC 6 cut(s) 998, 1086, 1684, 1803, 2123, 2422
Hpy8I GTNNAC 6 cut(s) 998, 1086, 1684, 1803, 2123, 2422
HpyAV CCTTC 8 cut(s) 57, 142, 427, 611, 1939, 2004, 2157, 2255
HpyCH4III ACNGT 7 cut(s) 18, 39, 560, 1212, 1766, 1885, 2085
HpyCH4IV ACGT 2 cut(s) 258, 626
HpySE526I ACGT 2 cut(s) 258, 626
Hsp92I GRCGYC 1 cut(s) 2215
HspAI GCGC 2 cut(s) 2138, 2215
KasI GGCGCC 1 cut(s) 2214
Kpn2I TCCGGA 3 cut(s) 50, 87, 283
KroI GCCGGC 1 cut(s) 98
KroNI GCCGGC 1 cut(s) 100
Ksp22I TGATCA 1 cut(s) 2464
LmnI GCTCC 9 cut(s) 10, 90, 115, 366, 609, 919, 1574, 1996, 2083
LweI GCATC 5 cut(s) 322, 505, 988, 1401, 2342
MabI ACCWGGT 1 cut(s) 393
MaeI CTAG 1 cut(s) 95
MaeII ACGT 2 cut(s) 258, 626
MaeIII GTNAC 4 cut(s) 33, 988, 1123, 1273
MfeI CAATTG 3 cut(s) 860, 1227, 2097
MflI RGATCY 3 cut(s) 1303, 1921, 2188
MhlI GDGCHC 6 cut(s) 112, 417, 721, 1000, 1827, 1993
MlsI TGGCCA 1 cut(s) 2343
MluNI TGGCCA 1 cut(s) 2343
Mly113I GGCGCC 1 cut(s) 2215
MlyI GAGTC 5 cut(s) 859, 985, 1184, 1339, 1552
MmeI TCCRAC 1 cut(s) 2216
Mox20I TGGCCA 1 cut(s) 2343
MroI TCCGGA 3 cut(s) 50, 87, 283
MroNI GCCGGC 1 cut(s) 98
MscI TGGCCA 1 cut(s) 2343
MseI TTAA 9 cut(s) 537, 552, 909, 1062, 1542, 1761, 1931, 2169, 2454
MslI CAYNNNNRTG 2 cut(s) 819, 1611
Msp20I TGGCCA 1 cut(s) 2343
MspCI CTTAAG 1 cut(s) 536
MspI CCGG 6 cut(s) 51, 88, 99, 106, 284, 2337
MspR9I CCNGG 6 cut(s) 107, 114, 395, 643, 1610, 2070
MunI CAATTG 3 cut(s) 860, 1227, 2097
Mva1269I GAATGC 2 cut(s) 1228, 1489
MvaI CCWGG 5 cut(s) 114, 395, 643, 1610, 2070
NaeI GCCGGC 1 cut(s) 100
NarI GGCGCC 1 cut(s) 2215
NciI CCSGG 1 cut(s) 107
NdeI CATATG 2 cut(s) 1999, 2304
NgoMIV GCCGGC 1 cut(s) 98
NlaIV GGNNCC 9 cut(s) 6, 111, 339, 414, 415, 1825, 2067, 2190, 2216
NmuCI GTSAC 3 cut(s) 33, 988, 1123
NspI RCATGY 3 cut(s) 818, 1801, 2527
PaeI GCATGC 2 cut(s) 818, 2527
PaeR7I CTCGAG 1 cut(s) 797
PagI TCATGA 3 cut(s) 786, 1333, 1618
PaqCI CACCTGC 2 cut(s) 984, 2143
PciI ACATGT 1 cut(s) 1797
PctI GAATGC 2 cut(s) 1228, 1489
PdiI GCCGGC 1 cut(s) 100
PfeI GAWTC 5 cut(s) 91, 125, 790, 1871, 2390
PflFI GACNNNGTC 1 cut(s) 868
PflMI CCANNNNNTGG 1 cut(s) 2087
PfoI TCCNGGA 1 cut(s) 112
PleI GAGTC 5 cut(s) 859, 985, 1183, 1338, 1552
PluTI GGCGCC 1 cut(s) 2218
PpsI GAGTC 5 cut(s) 859, 985, 1183, 1338, 1552
PscI ACATGT 1 cut(s) 1797
PsiI TTATAA 1 cut(s) 1809
Psp6I CCWGG 5 cut(s) 112, 393, 641, 1608, 2068
PspFI CCCAGC 2 cut(s) 526, 2478
PspGI CCWGG 5 cut(s) 112, 393, 641, 1608, 2068
PspN4I GGNNCC 9 cut(s) 6, 111, 339, 414, 415, 1825, 2067, 2190, 2216
PspOMI GGGCCC 2 cut(s) 413, 1823
PspPI GGNCC 6 cut(s) 286, 337, 413, 414, 1823, 1824
PspXI VCTCGAGB 1 cut(s) 797
PstI CTGCAG 4 cut(s) 763, 1093, 1591, 1879
PstNI CAGNNNCTG 3 cut(s) 1874, 1883, 2018
PsuI RGATCY 3 cut(s) 1303, 1921, 2188
PsyI GACNNNGTC 1 cut(s) 868
RsaI GTAC 6 cut(s) 732, 756, 1043, 1666, 1796, 1936
RsaNI GTAC 6 cut(s) 731, 755, 1042, 1665, 1795, 1935
RseI CAYNNNNRTG 2 cut(s) 819, 1611
SaqAI TTAA 9 cut(s) 537, 552, 909, 1062, 1542, 1761, 1931, 2169, 2454
Sau96I GGNCC 6 cut(s) 286, 337, 413, 414, 1823, 1824
SchI GAGTC 5 cut(s) 859, 985, 1184, 1339, 1552
ScrFI CCNGG 6 cut(s) 107, 114, 395, 643, 1610, 2070
SduI GDGCHC 6 cut(s) 112, 417, 721, 1000, 1827, 1993
SexAI ACCWGGT 1 cut(s) 393
SfaNI GCATC 5 cut(s) 322, 505, 988, 1401, 2342
SfcI CTRYAG 5 cut(s) 759, 1089, 1587, 1639, 1875
SfoI GGCGCC 1 cut(s) 2216
Sfr274I CTCGAG 1 cut(s) 797
SinI GGWCC 2 cut(s) 286, 337
SlaI CTCGAG 1 cut(s) 797
SmiMI CAYNNNNRTG 2 cut(s) 819, 1611
SmlI CTYRAG 6 cut(s) 536, 734, 797, 1076, 1890, 2286
SmoI CTYRAG 6 cut(s) 536, 734, 797, 1076, 1890, 2286
SphI GCATGC 2 cut(s) 818, 2527
SsiI CCGC 6 cut(s) 11, 133, 335, 382, 2299, 2433
SspDI GGCGCC 1 cut(s) 2214
SspMI CTAG 1 cut(s) 95
StyD4I CCNGG 6 cut(s) 105, 112, 393, 641, 1608, 2068
StyI CCWWGG 4 cut(s) 417, 1386, 1392, 1569
TaaI ACNGT 7 cut(s) 18, 39, 560, 1212, 1766, 1885, 2085
TaiI ACGT 2 cut(s) 261, 629
TaqI TCGA 1 cut(s) 798
TatI WGTACW 3 cut(s) 730, 1041, 1664
TauI GCSGC 1 cut(s) 2302
TfiI GAWTC 5 cut(s) 91, 125, 790, 1871, 2390
Tru1I TTAA 9 cut(s) 537, 552, 909, 1062, 1542, 1761, 1931, 2169, 2454
Tru9I TTAA 9 cut(s) 537, 552, 909, 1062, 1542, 1761, 1931, 2169, 2454
TscAI CASTG 6 cut(s) 775, 1098, 1587, 1735, 2019, 2330
TseFI GTSAC 3 cut(s) 33, 988, 1123
Tsp45I GTSAC 3 cut(s) 33, 988, 1123
TspGWI ACGGA 3 cut(s) 1142, 1172, 2482
TspRI CASTG 6 cut(s) 775, 1098, 1587, 1735, 2019, 2330
Tth111I GACNNNGTC 1 cut(s) 868
Van91I CCANNNNNTGG 1 cut(s) 2087
Vha464I CTTAAG 1 cut(s) 536
VneI GTGCAC 1 cut(s) 996
VpaK11BI GGWCC 2 cut(s) 286, 337
XapI RAATTY 4 cut(s) 654, 1757, 1852, 2516
XceI RCATGY 3 cut(s) 818, 1801, 2527
XhoI CTCGAG 1 cut(s) 797
XmiI GTMKAC 1 cut(s) 2122
XspI CTAG 1 cut(s) 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.