Rh6CG468700

Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0010492
Physical Location & Seq
Forward (+)
64043816 .. 64050962
7147 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG468700.1

Sequence Viewer

Length: 1818 bp
ATGGCTCCTCCGGCCATATCGCAGCGATCTTCGTCGCCGTCGCAGCCCTCCGGAAAAGGCGAAGTGGCGGATGTGAAAGCACAGCTCCGGCTTCTGGCTGGCAGCAGAGCCCCGGGAGCGGATGATTCGAAGCGTGAACTTTTCAAGAAGGTTATCTCTTACATGACGATTGGCATTGATGTGTCCTCTGTTTTTGGAGAGATGGTGATGTGCTCAGCAACGTCCGATATTGTTTTGAAGAAAATGTGTTATCTCTATGTTGGGAATTATGCAAAGGTCAATCCTGACCTCGCGCTTTTGACGATCAATTTTCTTCAAAGAGATTGCAAGGATGCAGACCCAATGATCCGTGGTCTTGCTTTGAGGAGCTTGTGTTCGTTACGAGTGACGAATCTGGTGGAGTATTTGGTGGGGCCTTTGGGTGCTGGGTTGAAGGATAATAATAGTTATGTGAGGATGGTAGCAGCTATGGGGGTTCTGAAGCTGTATCACATATCAGCTTCAACTTGTGTCGATGCAGATTTTCCCGCAATGCTTAAGCATTTGTTGCTTAACGATCCAGATACACAGGTGGTTGCAAATTGTTTATCTGCCCTGCAAGAGATTTGGAGTTTAGAAGGAAGCAGCTCTGAGGAGGTATCCAGGGAGAGAGAAATTTTGCTCAGCAAATCAGTTATATACTATCTTTTGAATCGGATTAGGGAATTCAGTGAATGGGCACAATGTCTTGTGCTTGAGTTGGTAGCTAAGTATGTACCCTCAGATAGCAATGAGATATTTGATGTCATGAATCTGCTCGAGGATAGACTGCAGCATGCAAATGGTGCCGTTGTCTTGGCAACCATAAAAGTATTTCTTCAATTGACTTTATCGATGACTGATGTTCATCAGCAGGTATATGAGCGTATTAAAGCTCCTCTTCTAACCTTAGTGAGCTCAGGAAGTCCAGAGCAATCTTATGCAGTTCTAAGCCACCTGCATCTTTTGGTGATGCGTGCTCCTTTCATATTTTCTTCAGACTATAAACACTTTTATTGCCAGTACAATGAGCCATCCTATGTCAAAAAATTGAAGCTTGAGATGTTGACTGCAGTGGCAAATGAGAGCAATACATATGAAATCGTGACGGAATTATGTGAATATGCTGCAAATGTTGATATTCCCATTGCAAGAGAGTCAATCCGTGCGGTTGGTAAAATAGCTCTTCAGCAGTATGATGTGAATGCAATTGTTGATCGGCTTCTTCAGTTTCTGGAGATGGAGAAGGACTATGTAACTGCTGAAGCTCTGGTTCTTGTAAAAGATCTGCTAAGAAAATATCCCCAATGGAGTCAAGATTGCATTGCAGTTGTTGGGAACATAAGCAGCAATAATGTCCAAGAACCCAAGGCCAAGGCGGCTCTTATATGGATGCTGGGCGAGTATTCTCAGGACATGCATGATGCACCTTATATATTAGAGGGTTTGGTTGAAAATTGGGAGGATGAGCACTCTGCCGAGGTTCGCTTACATCTTCTCACAGCAGTGATGAAGTGCTTTTTTAAGAGGCCACCTGAGACTCAGAATTCCTTGGGAGCTGCACTGGCTGCAGGTCTTGCTGATTTTCACCAGGATGTTCATGATAGAGCCTTATTCTACTACAGGCTTTTGCAATATGACATAAGTGTTGCCGAACGAGTGGTAAACCCTCCAAAGCAAGCTGTTTCTGTCTTTGCTGATACCCAAAGCAGTGAAATCAAAGATCGGATCTTTGATGAATTTAACAGTTTGTCTGTTGTATATCAAAAGGTAATAATAACTCTCCTCCCATGCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005488 GO:0005515 GO:0019899 GO:0019900 GO:0019901 GO:0043424
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Adaptin_N B2-adapt-app_C

Protein Analysis

605

Amino Acids

67.76

Weight (kDa)

5.39

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Adaptin_N PF01602 39 - 551 1.8e-94 Adaptin N terminal region
Cnd1 PF12717 115 - 287 4e-46 non-SMC mitotic condensation complex subunit 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0010492)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G11490 AT5G11490 AT5G11490
fragaria_vesca FvH4_2g36170 FvH4_2g36170 FvH4_2g36170
malus_domestica MD08G1118900.v1.1 MD15G1098200.v1.1
prunus_persica Prupe.1G453100_v2.0.a1
pyrus_communis pycom08g09930 pycom15g09000
rosa_chinensis RchiOBHm_Chr6g0305701
rosa_laevigata RLG00000010867
rosa_multiflora Rmu_sc0001809.1_g000035
rosa_roxburghii Rroxscaffold_7G00162430
rosa_rugosa Rorug06G0343300
rosa_samantha Rh6AG454800 Rh6BG446700 Rh6CG468700 Rh6DG455300
rosa_wichuraiana Rw6G039660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 984
Acc36I ACCTGC 3 cut(s) 883, 984, 1580
AccB1I GGYRCC 1 cut(s) 824
AccBSI CCGCTC 1 cut(s) 119
AccII CGCG 1 cut(s) 293
AccIII TCCGGA 1 cut(s) 50
AciI CCGC 5 cut(s) 68, 119, 528, 1187, 1397
AclWI GGATC 3 cut(s) 340, 551, 1754
AcoI YGGCCR 1 cut(s) 12
AcsI RAATTY 4 cut(s) 654, 704, 1564, 1757
AcuI CTGAAG 5 cut(s) 500, 999, 1190, 1229, 1302
AfaI GTAC 2 cut(s) 756, 1043
AfiI CCNNNNNNNGG 2 cut(s) 94, 118
AflII CTTAAG 1 cut(s) 536
AgsI TTSAA 9 cut(s) 145, 238, 317, 433, 504, 691, 860, 1072, 1472
AjnI CCWGG 2 cut(s) 641, 1608
AleI CACNNNNGTG 1 cut(s) 1523
AloI GAACNNNNNNTCC 2 cut(s) 358, 390
Alw21I GWGCWC 4 cut(s) 215, 938, 1000, 1491
Alw26I GTCTC 1 cut(s) 1550
AlwI GGATC 3 cut(s) 340, 551, 1754
AlwNI CAGNNNCTG 1 cut(s) 1252
Ama87I CYCGRG 2 cut(s) 112, 797
Aor13HI TCCGGA 1 cut(s) 50
AoxI GGCC 4 cut(s) 12, 413, 1389, 1547
ApoI RAATTY 4 cut(s) 654, 704, 1564, 1757
AspLEI GCGC 1 cut(s) 295
AspS9I GGNCC 1 cut(s) 413
AsuC2I CCSGG 2 cut(s) 113, 114
AsuHPI GGTGA 3 cut(s) 217, 1000, 1598
AsuII TTCGAA 1 cut(s) 128
AvaI CYCGRG 2 cut(s) 112, 797
BaeGI GKGCMC 1 cut(s) 721
BaeI ACNNNNGTAYC 2 cut(s) 555, 588
BanI GGYRCC 1 cut(s) 824
BanII GRGCYC 2 cut(s) 112, 938
Bbv12I GWGCWC 4 cut(s) 215, 938, 1000, 1491
BccI CCATC 4 cut(s) 196, 451, 1060, 1252
BceAI ACGGC 2 cut(s) 22, 812
BciT130I CCWGG 2 cut(s) 643, 1610
BciVI GTATCC 1 cut(s) 649
BcnI CCSGG 2 cut(s) 113, 114
BcoDI GTCTC 1 cut(s) 1550
BfmI CTRYAG 4 cut(s) 809, 1089, 1587, 1639
BfrI CTTAAG 1 cut(s) 536
BfuAI ACCTGC 3 cut(s) 883, 984, 1580
BfuI GTATCC 1 cut(s) 649
BglI GCCNNNNNGGC 1 cut(s) 1397
BglII AGATCT 1 cut(s) 1303
BlpI GCTNAGC 2 cut(s) 214, 662
Bme1390I CCNGG 4 cut(s) 113, 114, 643, 1610
BmeT110I CYCGRG 2 cut(s) 112, 797
BmgT120I GGNCC 1 cut(s) 413
BmiI GGNNCC 3 cut(s) 6, 414, 826
BmrFI CCNGG 4 cut(s) 113, 114, 643, 1610
BmsI GCATC 6 cut(s) 322, 505, 981, 988, 1401, 1432
BpmI CTGGAG 1 cut(s) 1274
Bpu10I CCTNAGC 1 cut(s) 937
Bpu1102I GCTNAGC 2 cut(s) 214, 662
Bpu14I TTCGAA 1 cut(s) 128
BpuEI CTTGAG 2 cut(s) 755, 1097
BpuMI CCSGG 2 cut(s) 113, 114
Bsa29I ATCGAT 1 cut(s) 872
BsaBI GATNNNNATC 1 cut(s) 885
BsaJI CCNNGG 8 cut(s) 111, 112, 349, 642, 1386, 1392, 1497, 1569
BsaWI WCCGGW 1 cut(s) 50
BsaXI ACNNNNNCTCC 4 cut(s) 189, 219, 358, 388
Bsc4I CCNNNNNNNGG 2 cut(s) 94, 118
Bse1I ACTGG 2 cut(s) 1039, 1587
Bse3DI GCAATG 4 cut(s) 537, 775, 1164, 1341
Bse8I GATNNNNATC 1 cut(s) 885
BseAI TCCGGA 1 cut(s) 50
BseBI CCWGG 2 cut(s) 643, 1610
BseCI ATCGAT 1 cut(s) 872
BseDI CCNNGG 8 cut(s) 111, 112, 349, 642, 1386, 1392, 1497, 1569
BseGI GGATG 8 cut(s) 76, 127, 337, 462, 1052, 1416, 1489, 1618
BseJI GATNNNNATC 1 cut(s) 885
BseLI CCNNNNNNNGG 2 cut(s) 94, 118
BseMI GCAATG 4 cut(s) 537, 775, 1164, 1341
BseMII CTCAG 8 cut(s) 228, 621, 676, 774, 951, 1442, 1545, 1574
BseNI ACTGG 2 cut(s) 1039, 1587
BseRI GAGGAG 4 cut(s) 379, 647, 906, 1793
BseSI GKGCMC 1 cut(s) 721
BseYI CCCAGC 2 cut(s) 425, 1414
BsgI GTGCAG 1 cut(s) 1563
Bsh1236I CGCG 1 cut(s) 293
BshFI GGCC 4 cut(s) 14, 415, 1391, 1549
BshNI GGYRCC 1 cut(s) 824
BshVI ATCGAT 1 cut(s) 872
BsiHKAI GWGCWC 4 cut(s) 215, 938, 1000, 1491
BsiHKCI CYCGRG 2 cut(s) 112, 797
BsiSI CCGG 4 cut(s) 11, 51, 88, 113
BslI CCNNNNNNNGG 2 cut(s) 94, 118
BsmAI GTCTC 1 cut(s) 1550
BsmI GAATGC 1 cut(s) 1228
BsnI GGCC 4 cut(s) 14, 415, 1391, 1549
BsoBI CYCGRG 2 cut(s) 112, 797
Bsp119I TTCGAA 1 cut(s) 128
Bsp1286I GDGCHC 6 cut(s) 112, 215, 721, 938, 1000, 1491
Bsp13I TCCGGA 1 cut(s) 50
Bsp143I GATC 8 cut(s) 26, 303, 345, 556, 1234, 1303, 1741, 1746
Bsp1720I GCTNAGC 2 cut(s) 214, 662
BspACI CCGC 5 cut(s) 68, 119, 528, 1187, 1397
BspANI GGCC 4 cut(s) 14, 415, 1391, 1549
BspCNI CTCAG 8 cut(s) 227, 622, 675, 773, 950, 1441, 1546, 1573
BspDI ATCGAT 1 cut(s) 872
BspEI TCCGGA 1 cut(s) 50
BspFNI CGCG 1 cut(s) 293
BspHI TCATGA 2 cut(s) 786, 1618
BspLI GGNNCC 3 cut(s) 6, 414, 826
BspMAI CTGCAG 3 cut(s) 813, 1093, 1591
BspMI ACCTGC 3 cut(s) 883, 984, 1580
BspPI GGATC 3 cut(s) 340, 551, 1754
BspQI GCTCTTC 1 cut(s) 1209
BspT104I TTCGAA 1 cut(s) 128
BspT107I GGYRCC 1 cut(s) 824
BspTI CTTAAG 1 cut(s) 536
BsrBI CCGCTC 1 cut(s) 119
BsrDI GCAATG 4 cut(s) 537, 775, 1164, 1341
BsrI ACTGG 2 cut(s) 1039, 1587
BssECI CCNNGG 8 cut(s) 111, 112, 349, 642, 1386, 1392, 1497, 1569
BssMI GATC 8 cut(s) 26, 303, 345, 556, 1234, 1303, 1741, 1746
BssT1I CCWWGG 3 cut(s) 1386, 1392, 1569
Bst2UI CCWGG 2 cut(s) 643, 1610
Bst4CI ACNGT 1 cut(s) 1766
Bst6I CTCTTC 2 cut(s) 924, 1209
BstAFI CTTAAG 1 cut(s) 536
BstAPI GCANNNNNTGC 4 cut(s) 547, 824, 1586, 1595
BstBI TTCGAA 1 cut(s) 128
BstC8I GCNNGC 4 cut(s) 100, 816, 996, 1698
BstDSI CCRYGG 1 cut(s) 349
BstF5I GGATG 8 cut(s) 76, 127, 337, 462, 1052, 1416, 1489, 1618
BstFNI CGCG 1 cut(s) 293
BstHHI GCGC 1 cut(s) 295
BstKTI GATC 8 cut(s) 29, 306, 348, 559, 1237, 1306, 1744, 1749
BstMAI GTCTC 1 cut(s) 1550
BstMBI GATC 8 cut(s) 26, 303, 345, 556, 1234, 1303, 1741, 1746
BstMWI GCNNNNNNNGC 9 cut(s) 11, 43, 116, 547, 824, 1397, 1583, 1586, 1595
BstNI CCWGG 2 cut(s) 643, 1610
BstNSI RCATGY 2 cut(s) 818, 1438
BstSCI CCNGG 4 cut(s) 111, 112, 641, 1608
BstSFI CTRYAG 4 cut(s) 809, 1089, 1587, 1639
BstSLI GKGCMC 1 cut(s) 721
BstUI CGCG 1 cut(s) 293
BstX2I RGATCY 2 cut(s) 1303, 1746
BstYI RGATCY 2 cut(s) 1303, 1746
Bsu15I ATCGAT 1 cut(s) 872
BsuI GTATCC 1 cut(s) 649
BsuRI GGCC 4 cut(s) 14, 415, 1391, 1549
BsuTUI ATCGAT 1 cut(s) 872
BtgI CCRYGG 1 cut(s) 349
BtsCI GGATG 8 cut(s) 76, 127, 337, 462, 1052, 1416, 1489, 1618
BtsI GCAGTG 3 cut(s) 1098, 1530, 1735
BtsIMutI CAGTG 5 cut(s) 715, 1098, 1530, 1580, 1735
BveI ACCTGC 3 cut(s) 883, 984, 1580
Cac8I GCNNGC 4 cut(s) 100, 816, 996, 1698
CaiI CAGNNNCTG 1 cut(s) 1252
CciI TCATGA 2 cut(s) 786, 1618
CfoI GCGC 1 cut(s) 295
Cfr13I GGNCC 1 cut(s) 413
Cfr9I CCCGGG 1 cut(s) 112
ClaI ATCGAT 1 cut(s) 872
Csp6I GTAC 2 cut(s) 755, 1042
CviAII CATG 7 cut(s) 163, 787, 815, 1435, 1439, 1619, 1809
CviQI GTAC 2 cut(s) 755, 1042
DpnI GATC 8 cut(s) 28, 305, 347, 558, 1236, 1305, 1743, 1748
DpnII GATC 8 cut(s) 26, 303, 345, 556, 1234, 1303, 1741, 1746
EaeI YGGCCR 1 cut(s) 12
Eam1104I CTCTTC 2 cut(s) 924, 1209
EarI CTCTTC 2 cut(s) 924, 1209
EciI GGCGGA 1 cut(s) 83
Ecl136II GAGCTC 1 cut(s) 936
Eco130I CCWWGG 3 cut(s) 1386, 1392, 1569
Eco24I GRGCYC 2 cut(s) 112, 938
Eco53kI GAGCTC 1 cut(s) 936
Eco57I CTGAAG 5 cut(s) 500, 999, 1190, 1229, 1302
Eco88I CYCGRG 2 cut(s) 112, 797
EcoICRI GAGCTC 1 cut(s) 936
EcoO109I RGGNCCY 1 cut(s) 413
EcoRI GAATTC 2 cut(s) 704, 1564
EcoRII CCWGG 2 cut(s) 641, 1608
EcoT14I CCWWGG 3 cut(s) 1386, 1392, 1569
EcoT22I ATGCAT 1 cut(s) 1440
EcoT38I GRGCYC 2 cut(s) 112, 938
ErhI CCWWGG 3 cut(s) 1386, 1392, 1569
FaeI CATG 7 cut(s) 166, 790, 818, 1438, 1442, 1622, 1812
FalI AAGNNNNNCTT 4 cut(s) 840, 872, 903, 935
FatI CATG 7 cut(s) 162, 786, 814, 1434, 1438, 1618, 1808
FauI CCCGC 1 cut(s) 535
FauNDI CATATG 1 cut(s) 1114
FokI GGATG 8 cut(s) 83, 134, 344, 469, 1039, 1423, 1496, 1625
FriOI GRGCYC 2 cut(s) 112, 938
GlaI GCGC 1 cut(s) 294
GsaI CCCAGC 2 cut(s) 429, 1418
GsuI CTGGAG 1 cut(s) 1274
HaeIII GGCC 4 cut(s) 14, 415, 1391, 1549
HapII CCGG 4 cut(s) 11, 51, 88, 113
HhaI GCGC 1 cut(s) 295
Hin1II CATG 7 cut(s) 166, 790, 818, 1438, 1442, 1622, 1812
Hin6I GCGC 1 cut(s) 293
HinP1I GCGC 1 cut(s) 293
HincII GTYRAC 1 cut(s) 1086
HindII GTYRAC 1 cut(s) 1086
HindIII AAGCTT 1 cut(s) 1073
HinfI GANTC 7 cut(s) 125, 391, 691, 790, 1175, 1330, 1558
HpaII CCGG 4 cut(s) 11, 51, 88, 113
HphI GGTGA 3 cut(s) 217, 1000, 1598
Hpy166II GTNNAC 3 cut(s) 137, 1086, 1684
Hpy188I TCNGA 8 cut(s) 226, 480, 631, 696, 763, 1018, 1563, 1746
Hpy8I GTNNAC 3 cut(s) 137, 1086, 1684
Hpy99I CGWCG 2 cut(s) 37, 43
HpyAV CCTTC 4 cut(s) 142, 427, 611, 1258
HpyCH4III ACNGT 1 cut(s) 1766
HpyCH4IV ACGT 1 cut(s) 221
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 43, 116, 547, 824, 1397, 1583, 1586, 1595
HpySE526I ACGT 1 cut(s) 221
Hsp92II CATG 7 cut(s) 166, 790, 818, 1438, 1442, 1622, 1812
HspAI GCGC 1 cut(s) 293
Kpn2I TCCGGA 1 cut(s) 50
Kzo9I GATC 8 cut(s) 26, 303, 345, 556, 1234, 1303, 1741, 1746
LguI GCTCTTC 1 cut(s) 1209
LmnI GCTCC 7 cut(s) 10, 90, 116, 366, 919, 1003, 1574
LweI GCATC 6 cut(s) 322, 505, 981, 988, 1401, 1432
MaeII ACGT 1 cut(s) 221
MaeIII GTNAC 4 cut(s) 378, 385, 1123, 1273
MalI GATC 8 cut(s) 28, 305, 347, 558, 1236, 1305, 1743, 1748
MbiI CCGCTC 1 cut(s) 119
MboI GATC 8 cut(s) 26, 303, 345, 556, 1234, 1303, 1741, 1746
MboII GAAGA 9 cut(s) 21, 250, 305, 848, 911, 1005, 1196, 1235, 1505
MfeI CAATTG 2 cut(s) 860, 1227
MflI RGATCY 2 cut(s) 1303, 1746
MhlI GDGCHC 6 cut(s) 112, 215, 721, 938, 1000, 1491
MlyI GAGTC 3 cut(s) 1184, 1339, 1552
Mph1103I ATGCAT 1 cut(s) 1440
MroI TCCGGA 1 cut(s) 50
MseI TTAA 5 cut(s) 537, 552, 909, 1542, 1761
MslI CAYNNNNRTG 5 cut(s) 179, 819, 1523, 1611, 1813
MspCI CTTAAG 1 cut(s) 536
MspI CCGG 4 cut(s) 11, 51, 88, 113
MspR9I CCNGG 4 cut(s) 113, 114, 643, 1610
MunI CAATTG 2 cut(s) 860, 1227
Mva1269I GAATGC 1 cut(s) 1228
MvaI CCWGG 2 cut(s) 643, 1610
MvnI CGCG 1 cut(s) 293
MwoI GCNNNNNNNGC 9 cut(s) 11, 43, 116, 547, 824, 1397, 1583, 1586, 1595
NciI CCSGG 2 cut(s) 113, 114
NdeI CATATG 1 cut(s) 1114
NdeII GATC 8 cut(s) 26, 303, 345, 556, 1234, 1303, 1741, 1746
NlaIII CATG 7 cut(s) 166, 790, 818, 1438, 1442, 1622, 1812
NlaIV GGNNCC 3 cut(s) 6, 414, 826
NmeAIII GCCGAG 1 cut(s) 1522
NmuCI GTSAC 2 cut(s) 385, 1123
NsiI ATGCAT 1 cut(s) 1440
NspI RCATGY 2 cut(s) 818, 1438
NspV TTCGAA 1 cut(s) 128
OliI CACNNNNGTG 1 cut(s) 1523
PaeI GCATGC 1 cut(s) 818
PaeR7I CTCGAG 1 cut(s) 797
PagI TCATGA 2 cut(s) 786, 1618
PaqCI CACCTGC 1 cut(s) 984
PciSI GCTCTTC 1 cut(s) 1209
PctI GAATGC 1 cut(s) 1228
PfeI GAWTC 4 cut(s) 125, 391, 691, 790
PleI GAGTC 3 cut(s) 1183, 1338, 1552
PpsI GAGTC 3 cut(s) 1183, 1338, 1552
Psp124BI GAGCTC 1 cut(s) 938
Psp6I CCWGG 2 cut(s) 641, 1608
PspFI CCCAGC 2 cut(s) 425, 1414
PspGI CCWGG 2 cut(s) 641, 1608
PspN4I GGNNCC 3 cut(s) 6, 414, 826
PspPI GGNCC 1 cut(s) 413
PspXI VCTCGAGB 1 cut(s) 797
PstI CTGCAG 3 cut(s) 813, 1093, 1591
PstNI CAGNNNCTG 1 cut(s) 1252
PsuI RGATCY 2 cut(s) 1303, 1746
RsaI GTAC 2 cut(s) 756, 1043
RsaNI GTAC 2 cut(s) 755, 1042
RseI CAYNNNNRTG 5 cut(s) 179, 819, 1523, 1611, 1813
SacI GAGCTC 1 cut(s) 938
SapI GCTCTTC 1 cut(s) 1209
SaqAI TTAA 5 cut(s) 537, 552, 909, 1542, 1761
Sau3AI GATC 8 cut(s) 26, 303, 345, 556, 1234, 1303, 1741, 1746
Sau96I GGNCC 1 cut(s) 413
SchI GAGTC 3 cut(s) 1184, 1339, 1552
ScrFI CCNGG 4 cut(s) 113, 114, 643, 1610
SduI GDGCHC 6 cut(s) 112, 215, 721, 938, 1000, 1491
SfaNI GCATC 6 cut(s) 322, 505, 981, 988, 1401, 1432
SfcI CTRYAG 4 cut(s) 809, 1089, 1587, 1639
Sfr274I CTCGAG 1 cut(s) 797
SfuI TTCGAA 1 cut(s) 128
SlaI CTCGAG 1 cut(s) 797
SmaI CCCGGG 1 cut(s) 114
SmiMI CAYNNNNRTG 5 cut(s) 179, 819, 1523, 1611, 1813
SmlI CTYRAG 4 cut(s) 536, 734, 797, 1076
SmoI CTYRAG 4 cut(s) 536, 734, 797, 1076
SphI GCATGC 1 cut(s) 818
SsiI CCGC 5 cut(s) 68, 119, 528, 1187, 1397
SstI GAGCTC 1 cut(s) 938
StyD4I CCNGG 4 cut(s) 111, 112, 641, 1608
StyI CCWWGG 3 cut(s) 1386, 1392, 1569
TaaI ACNGT 1 cut(s) 1766
TaiI ACGT 1 cut(s) 224
TaqI TCGA 4 cut(s) 128, 513, 798, 872
TatI WGTACW 1 cut(s) 1041
TauI GCSGC 1 cut(s) 1400
TfiI GAWTC 4 cut(s) 125, 391, 691, 790
Tru1I TTAA 5 cut(s) 537, 552, 909, 1542, 1761
Tru9I TTAA 5 cut(s) 537, 552, 909, 1542, 1761
TscAI CASTG 5 cut(s) 715, 1098, 1530, 1587, 1735
TseFI GTSAC 2 cut(s) 385, 1123
Tsp45I GTSAC 2 cut(s) 385, 1123
TspDTI ATGAA 7 cut(s) 803, 875, 994, 1131, 1544, 1607, 1770
TspGWI ACGGA 3 cut(s) 338, 1142, 1172
TspMI CCCGGG 1 cut(s) 112
TspRI CASTG 5 cut(s) 715, 1098, 1530, 1587, 1735
Vha464I CTTAAG 1 cut(s) 536
XapI RAATTY 4 cut(s) 654, 704, 1564, 1757
XceI RCATGY 2 cut(s) 818, 1438
XhoI CTCGAG 1 cut(s) 797
XmaI CCCGGG 1 cut(s) 112
Zsp2I ATGCAT 1 cut(s) 1440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.