Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G11490 AT5G11490 AT5G11490 |
| fragaria_vesca | FvH4_2g36170 FvH4_2g36170 FvH4_2g36170 |
| malus_domestica | MD08G1118900.v1.1 MD15G1098200.v1.1 |
| prunus_persica | Prupe.1G453100_v2.0.a1 |
| pyrus_communis | pycom08g09930 pycom15g09000 |
| rosa_chinensis | RchiOBHm_Chr6g0305701 |
| rosa_laevigata | RLG00000010867 |
| rosa_multiflora | Rmu_sc0001809.1_g000035 |
| rosa_roxburghii | Rroxscaffold_7G00162430 |
| rosa_rugosa | Rorug06G0343300 |
| rosa_samantha | Rh6AG454800 Rh6BG446700 Rh6CG468700 Rh6DG455300 |
| rosa_wichuraiana | Rw6G039660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2210 |
| Acc36I | ACCTGC | 4 cut(s) | 815, 1165, 1282, 1979 |
| AccII | CGCG | 1 cut(s) | 1025 |
| AccIII | TCCGGA | 3 cut(s) | 446, 483, 679 |
| AciI | CCGC | 5 cut(s) | 367, 1361, 1490, 1745, 1949 |
| AclWI | GGATC | 4 cut(s) | 739, 748, 1157, 2327 |
| AcoI | YGGCCR | 2 cut(s) | 314, 373 |
| AcsI | RAATTY | 5 cut(s) | 186, 1053, 1103, 2158, 2253 |
| AcuI | CTGAAG | 5 cut(s) | 899, 1050, 1193, 1398, 1701 |
| AfaI | GTAC | 4 cut(s) | 137, 1131, 1155, 1442 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 508, 1099 |
| AflII | CTTAAG | 1 cut(s) | 935 |
| AflIII | ACRYGT | 1 cut(s) | 2198 |
| AjiI | CACGTC | 2 cut(s) | 217, 1618 |
| AjnI | CCWGG | 4 cut(s) | 103, 159, 736, 1040 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 757, 789 |
| Alw21I | GWGCWC | 4 cut(s) | 349, 508, 611, 1399 |
| Alw26I | GTCTC | 3 cut(s) | 441, 583, 1949 |
| Alw44I | GTGCAC | 1 cut(s) | 1395 |
| AlwI | GGATC | 4 cut(s) | 739, 748, 1157, 2327 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2284 |
| Ama87I | CYCGRG | 1 cut(s) | 1196 |
| Aor13HI | TCCGGA | 3 cut(s) | 446, 483, 679 |
| AoxI | GGCC | 7 cut(s) | 97, 314, 373, 812, 897, 1788, 1946 |
| ApaLI | GTGCAC | 1 cut(s) | 1395 |
| ApeKI | GCWGC | 8 cut(s) | 261, 478, 498, 1544, 1764, 1796, 1976, 1985 |
| ApoI | RAATTY | 5 cut(s) | 186, 1053, 1103, 2158, 2253 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 971, 1003 |
| AspLEI | GCGC | 3 cut(s) | 412, 824, 1025 |
| AspS9I | GGNCC | 6 cut(s) | 97, 157, 682, 733, 812, 2224 |
| AsuC2I | CCSGG | 2 cut(s) | 510, 959 |
| AsuHPI | GGTGA | 3 cut(s) | 613, 1399, 2092 |
| AvaI | CYCGRG | 1 cut(s) | 1196 |
| AvaII | GGWCC | 4 cut(s) | 157, 682, 733, 2224 |
| BaeGI | GKGCMC | 2 cut(s) | 1120, 1399 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 954, 987, 2273, 2306 |
| BalI | TGGCCA | 1 cut(s) | 316 |
| BanII | GRGCYC | 3 cut(s) | 168, 349, 508 |
| BauI | CACGAG | 1 cut(s) | 794 |
| Bbv12I | GWGCWC | 4 cut(s) | 349, 508, 611, 1399 |
| BbvCI | CCTCAGC | 2 cut(s) | 1709, 1896 |
| BbvI | GCAGC | 8 cut(s) | 248, 490, 510, 1531, 1776, 1808, 1963, 1972 |
| BccI | CCATC | 6 cut(s) | 214, 592, 1380, 1459, 1651, 2199 |
| BceAI | ACGGC | 2 cut(s) | 354, 418 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1557, 1591 |
| BciT130I | CCWGG | 4 cut(s) | 105, 161, 738, 1042 |
| BciVI | GTATCC | 2 cut(s) | 955, 1048 |
| BclI | TGATCA | 1 cut(s) | 393 |
| BcnI | CCSGG | 2 cut(s) | 510, 959 |
| BcoDI | GTCTC | 3 cut(s) | 441, 583, 1949 |
| BfaI | CTAG | 1 cut(s) | 74 |
| BfmI | CTRYAG | 4 cut(s) | 1158, 1986, 2038, 2276 |
| BfrI | CTTAAG | 1 cut(s) | 935 |
| BfuAI | ACCTGC | 4 cut(s) | 815, 1165, 1282, 1979 |
| BfuI | GTATCC | 2 cut(s) | 955, 1048 |
| BglII | AGATCT | 2 cut(s) | 337, 1702 |
| BisI | GCNGC | 9 cut(s) | 262, 479, 499, 1545, 1765, 1797, 1949, 1977, 1986 |
| BlpI | GCTNAGC | 3 cut(s) | 417, 610, 1061 |
| BlsI | GCNGC | 9 cut(s) | 263, 480, 500, 1546, 1766, 1798, 1950, 1978, 1987 |
| Bme1390I | CCNGG | 6 cut(s) | 105, 161, 510, 738, 959, 1042 |
| Bme18I | GGWCC | 4 cut(s) | 157, 682, 733, 2224 |
| BmeT110I | CYCGRG | 1 cut(s) | 1196 |
| BmgBI | CACGTC | 2 cut(s) | 217, 1618 |
| BmgT120I | GGNCC | 6 cut(s) | 97, 157, 682, 733, 812, 2224 |
| BmiI | GGNNCC | 4 cut(s) | 165, 402, 735, 813 |
| BmrFI | CCNGG | 6 cut(s) | 105, 161, 510, 738, 959, 1042 |
| BmsI | GCATC | 7 cut(s) | 259, 904, 1314, 1380, 1387, 1800, 1831 |
| BpmI | CTGGAG | 2 cut(s) | 182, 1673 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1709, 1896 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 417, 610, 1061 |
| BpuEI | CTTGAG | 2 cut(s) | 1154, 1496 |
| BpuMI | CCSGG | 2 cut(s) | 510, 959 |
| Bsa29I | ATCGAT | 2 cut(s) | 743, 2141 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1284, 2004, 2318 |
| BsaJI | CCNNGG | 7 cut(s) | 370, 736, 748, 1041, 1785, 1791, 1968 |
| BsaWI | WCCGGW | 4 cut(s) | 446, 483, 679, 1092 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 585, 615, 757, 787 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 508, 1099 |
| Bse118I | RCCGGY | 1 cut(s) | 494 |
| Bse1I | ACTGG | 4 cut(s) | 177, 356, 1070, 1438 |
| Bse3DI | GCAATG | 2 cut(s) | 145, 1563 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1284, 2004, 2318 |
| BseAI | TCCGGA | 3 cut(s) | 446, 483, 679 |
| BseBI | CCWGG | 4 cut(s) | 105, 161, 738, 1042 |
| BseCI | ATCGAT | 2 cut(s) | 743, 2141 |
| BseDI | CCNNGG | 7 cut(s) | 370, 736, 748, 1041, 1785, 1791, 1968 |
| BseGI | GGATG | 8 cut(s) | 33, 206, 224, 274, 861, 1815, 2017, 2191 |
| BseJI | GATNNNNATC | 3 cut(s) | 1284, 2004, 2318 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 508, 1099 |
| BseMI | GCAATG | 2 cut(s) | 145, 1563 |
| BseMII | CTCAG | 8 cut(s) | 294, 431, 452, 624, 980, 1700, 1887, 1944 |
| BseNI | ACTGG | 4 cut(s) | 177, 356, 1070, 1438 |
| BseRI | GAGGAG | 4 cut(s) | 264, 393, 778, 1305 |
| BseSI | GKGCMC | 2 cut(s) | 1120, 1399 |
| BseXI | GCAGC | 8 cut(s) | 248, 490, 510, 1531, 1776, 1808, 1963, 1972 |
| BseYI | CCCAGC | 1 cut(s) | 1813 |
| BsgI | GTGCAG | 2 cut(s) | 201, 1605 |
| Bsh1236I | CGCG | 1 cut(s) | 1025 |
| Bsh1285I | CGRYCG | 2 cut(s) | 958, 2145 |
| BshFI | GGCC | 7 cut(s) | 99, 316, 375, 814, 899, 1790, 1948 |
| BshVI | ATCGAT | 2 cut(s) | 743, 2141 |
| BsiEI | CGRYCG | 2 cut(s) | 958, 2145 |
| BsiHKAI | GWGCWC | 4 cut(s) | 349, 508, 611, 1399 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1196 |
| BsiSI | CCGG | 8 cut(s) | 407, 447, 484, 495, 509, 680, 958, 1093 |
| BslFI | GGGAC | 1 cut(s) | 2280 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 508, 1099 |
| BsmAI | GTCTC | 3 cut(s) | 441, 583, 1949 |
| BsmBI | CGTCTC | 1 cut(s) | 441 |
| BsmFI | GGGAC | 1 cut(s) | 2280 |
| BsmI | GAATGC | 2 cut(s) | 1627, 1888 |
| BsnI | GGCC | 7 cut(s) | 99, 316, 375, 814, 899, 1790, 1948 |
| BsoBI | CYCGRG | 1 cut(s) | 1196 |
| Bsp1286I | GDGCHC | 6 cut(s) | 168, 349, 508, 611, 1120, 1399 |
| Bsp13I | TCCGGA | 3 cut(s) | 446, 483, 679 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 417, 610, 1061 |
| BspACI | CCGC | 5 cut(s) | 367, 1361, 1490, 1745, 1949 |
| BspANI | GGCC | 7 cut(s) | 99, 316, 375, 814, 899, 1790, 1948 |
| BspCNI | CTCAG | 8 cut(s) | 295, 430, 451, 623, 979, 1701, 1888, 1945 |
| BspDI | ATCGAT | 2 cut(s) | 743, 2141 |
| BspEI | TCCGGA | 3 cut(s) | 446, 483, 679 |
| BspFNI | CGCG | 1 cut(s) | 1025 |
| BspHI | TCATGA | 3 cut(s) | 1185, 1828, 2017 |
| BspLI | GGNNCC | 4 cut(s) | 165, 402, 735, 813 |
| BspMAI | CTGCAG | 2 cut(s) | 1162, 1990 |
| BspMI | ACCTGC | 4 cut(s) | 815, 1165, 1282, 1979 |
| BspPI | GGATC | 4 cut(s) | 739, 748, 1157, 2327 |
| BspTI | CTTAAG | 1 cut(s) | 935 |
| BsrDI | GCAATG | 2 cut(s) | 145, 1563 |
| BsrFI | RCCGGY | 1 cut(s) | 494 |
| BsrI | ACTGG | 4 cut(s) | 177, 356, 1070, 1438 |
| BssAI | RCCGGY | 1 cut(s) | 494 |
| BssECI | CCNNGG | 7 cut(s) | 370, 736, 748, 1041, 1785, 1791, 1968 |
| BssSI | CACGAG | 1 cut(s) | 794 |
| BssT1I | CCWWGG | 3 cut(s) | 1785, 1791, 1968 |
| Bst2BI | CACGAG | 1 cut(s) | 794 |
| Bst2UI | CCWGG | 4 cut(s) | 105, 161, 738, 1042 |
| Bst4CI | ACNGT | 5 cut(s) | 360, 1611, 2167, 2228, 2286 |
| BstAFI | CTTAAG | 1 cut(s) | 935 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 946, 1223, 1985, 1994 |
| BstC8I | GCNNGC | 7 cut(s) | 414, 496, 756, 1067, 1215, 1395, 2097 |
| BstDSI | CCRYGG | 1 cut(s) | 370 |
| BstF5I | GGATG | 8 cut(s) | 33, 206, 224, 274, 861, 1815, 2017, 2191 |
| BstFNI | CGCG | 1 cut(s) | 1025 |
| BstHHI | GCGC | 3 cut(s) | 412, 824, 1025 |
| BstMAI | GTCTC | 3 cut(s) | 441, 583, 1949 |
| BstMCI | CGRYCG | 2 cut(s) | 958, 2145 |
| BstNI | CCWGG | 4 cut(s) | 105, 161, 738, 1042 |
| BstNSI | RCATGY | 2 cut(s) | 1217, 2202 |
| BstSCI | CCNGG | 6 cut(s) | 103, 159, 508, 736, 957, 1040 |
| BstSFI | CTRYAG | 4 cut(s) | 1158, 1986, 2038, 2276 |
| BstSLI | GKGCMC | 2 cut(s) | 1120, 1399 |
| BstUI | CGCG | 1 cut(s) | 1025 |
| BstV1I | GCAGC | 8 cut(s) | 248, 490, 510, 1531, 1776, 1808, 1963, 1972 |
| BstX2I | RGATCY | 4 cut(s) | 337, 1162, 1702, 2319 |
| BstYI | RGATCY | 4 cut(s) | 337, 1162, 1702, 2319 |
| Bsu15I | ATCGAT | 2 cut(s) | 743, 2141 |
| BsuI | GTATCC | 2 cut(s) | 955, 1048 |
| BsuRI | GGCC | 7 cut(s) | 99, 316, 375, 814, 899, 1790, 1948 |
| BsuTUI | ATCGAT | 2 cut(s) | 743, 2141 |
| BtgI | CCRYGG | 1 cut(s) | 370 |
| BtrI | CACGTC | 2 cut(s) | 217, 1618 |
| BtsCI | GGATG | 8 cut(s) | 33, 206, 224, 274, 861, 1815, 2017, 2191 |
| BtsI | GCAGTG | 1 cut(s) | 2134 |
| BtsIMutI | CAGTG | 4 cut(s) | 184, 317, 349, 2134 |
| BveI | ACCTGC | 4 cut(s) | 815, 1165, 1282, 1979 |
| Cac8I | GCNNGC | 7 cut(s) | 414, 496, 756, 1067, 1215, 1395, 2097 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2284 |
| CciI | TCATGA | 3 cut(s) | 1185, 1828, 2017 |
| CfoI | GCGC | 3 cut(s) | 412, 824, 1025 |
| Cfr10I | RCCGGY | 1 cut(s) | 494 |
| Cfr13I | GGNCC | 6 cut(s) | 97, 157, 682, 733, 812, 2224 |
| ClaI | ATCGAT | 2 cut(s) | 743, 2141 |
| CseI | GACGC | 1 cut(s) | 1014 |
| Csp6I | GTAC | 4 cut(s) | 136, 1130, 1154, 1441 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 777, 812 |
| CviAII | CATG | 8 cut(s) | 397, 559, 1186, 1214, 1829, 1838, 2018, 2199 |
| CviQI | GTAC | 4 cut(s) | 136, 1130, 1154, 1441 |
| DraI | TTTAAA | 1 cut(s) | 831 |
| EaeI | YGGCCR | 2 cut(s) | 314, 373 |
| Ecl136II | GAGCTC | 2 cut(s) | 347, 506 |
| Eco130I | CCWWGG | 3 cut(s) | 1785, 1791, 1968 |
| Eco24I | GRGCYC | 3 cut(s) | 168, 349, 508 |
| Eco47I | GGWCC | 4 cut(s) | 157, 682, 733, 2224 |
| Eco53kI | GAGCTC | 2 cut(s) | 347, 506 |
| Eco57I | CTGAAG | 5 cut(s) | 899, 1050, 1193, 1398, 1701 |
| Eco88I | CYCGRG | 1 cut(s) | 1196 |
| EcoICRI | GAGCTC | 2 cut(s) | 347, 506 |
| EcoO109I | RGGNCCY | 2 cut(s) | 733, 812 |
| EcoRII | CCWGG | 4 cut(s) | 103, 159, 736, 1040 |
| EcoT14I | CCWWGG | 3 cut(s) | 1785, 1791, 1968 |
| EcoT22I | ATGCAT | 1 cut(s) | 1839 |
| EcoT38I | GRGCYC | 3 cut(s) | 168, 349, 508 |
| ErhI | CCWWGG | 3 cut(s) | 1785, 1791, 1968 |
| Esp3I | CGTCTC | 1 cut(s) | 441 |
| FaeI | CATG | 8 cut(s) | 400, 562, 1189, 1217, 1832, 1841, 2021, 2202 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1239, 1271 |
| FaqI | GGGAC | 1 cut(s) | 2280 |
| FatI | CATG | 8 cut(s) | 396, 558, 1185, 1213, 1828, 1837, 2017, 2198 |
| FbaI | TGATCA | 1 cut(s) | 393 |
| Fnu4HI | GCNGC | 9 cut(s) | 262, 479, 499, 1545, 1765, 1797, 1949, 1977, 1986 |
| FokI | GGATG | 8 cut(s) | 40, 193, 211, 281, 868, 1822, 2024, 2178 |
| FriOI | GRGCYC | 3 cut(s) | 168, 349, 508 |
| Fsp4HI | GCNGC | 9 cut(s) | 262, 479, 499, 1545, 1765, 1797, 1949, 1977, 1986 |
| FspBI | CTAG | 1 cut(s) | 74 |
| GlaI | GCGC | 3 cut(s) | 411, 823, 1024 |
| GluI | GCNGC | 9 cut(s) | 262, 479, 499, 1545, 1765, 1797, 1949, 1977, 1986 |
| GsaI | CCCAGC | 1 cut(s) | 1817 |
| GsuI | CTGGAG | 2 cut(s) | 182, 1673 |
| HaeIII | GGCC | 7 cut(s) | 99, 316, 375, 814, 899, 1790, 1948 |
| HapII | CCGG | 8 cut(s) | 407, 447, 484, 495, 509, 680, 958, 1093 |
| HgaI | GACGC | 1 cut(s) | 1014 |
| HhaI | GCGC | 3 cut(s) | 412, 824, 1025 |
| Hin1II | CATG | 8 cut(s) | 400, 562, 1189, 1217, 1832, 1841, 2021, 2202 |
| Hin6I | GCGC | 3 cut(s) | 410, 822, 1023 |
| HinP1I | GCGC | 3 cut(s) | 410, 822, 1023 |
| HincII | GTYRAC | 2 cut(s) | 1485, 1633 |
| HindII | GTYRAC | 2 cut(s) | 1485, 1633 |
| HindIII | AAGCTT | 1 cut(s) | 1472 |
| HpaII | CCGG | 8 cut(s) | 407, 447, 484, 495, 509, 680, 958, 1093 |
| HphI | GGTGA | 3 cut(s) | 613, 1399, 2092 |
| Hpy166II | GTNNAC | 6 cut(s) | 1397, 1485, 1633, 1907, 2083, 2204 |
| Hpy8I | GTNNAC | 6 cut(s) | 1397, 1485, 1633, 1907, 2083, 2204 |
| Hpy99I | CGWCG | 2 cut(s) | 622, 2158 |
| HpyAV | CCTTC | 5 cut(s) | 110, 251, 453, 538, 1010 |
| HpyCH4III | ACNGT | 5 cut(s) | 360, 1611, 2167, 2228, 2286 |
| HpyCH4IV | ACGT | 3 cut(s) | 216, 617, 1617 |
| HpySE526I | ACGT | 3 cut(s) | 216, 617, 1617 |
| Hsp92II | CATG | 8 cut(s) | 400, 562, 1189, 1217, 1832, 1841, 2021, 2202 |
| HspAI | GCGC | 3 cut(s) | 410, 822, 1023 |
| Kpn2I | TCCGGA | 3 cut(s) | 446, 483, 679 |
| KroI | GCCGGC | 1 cut(s) | 494 |
| KroNI | GCCGGC | 1 cut(s) | 496 |
| Ksp22I | TGATCA | 1 cut(s) | 393 |
| Lsp1109I | GCAGC | 8 cut(s) | 248, 490, 510, 1531, 1776, 1808, 1963, 1972 |
| LweI | GCATC | 7 cut(s) | 259, 904, 1314, 1380, 1387, 1800, 1831 |
| MaeI | CTAG | 1 cut(s) | 74 |
| MaeII | ACGT | 3 cut(s) | 216, 617, 1617 |
| MaeIII | GTNAC | 5 cut(s) | 644, 784, 1505, 1522, 1672 |
| MfeI | CAATTG | 3 cut(s) | 169, 1259, 1626 |
| MflI | RGATCY | 4 cut(s) | 337, 1162, 1702, 2319 |
| MhlI | GDGCHC | 6 cut(s) | 168, 349, 508, 611, 1120, 1399 |
| MlsI | TGGCCA | 1 cut(s) | 316 |
| MluNI | TGGCCA | 1 cut(s) | 316 |
| MlyI | GAGTC | 5 cut(s) | 1258, 1583, 1738, 1951, 2309 |
| MmeI | TCCRAC | 2 cut(s) | 600, 950 |
| Mox20I | TGGCCA | 1 cut(s) | 316 |
| Mph1103I | ATGCAT | 1 cut(s) | 1839 |
| MroI | TCCGGA | 3 cut(s) | 446, 483, 679 |
| MroNI | GCCGGC | 1 cut(s) | 494 |
| MscI | TGGCCA | 1 cut(s) | 316 |
| MseI | TTAA | 8 cut(s) | 35, 830, 936, 951, 1461, 1941, 2162, 2329 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1218, 2010 |
| Msp20I | TGGCCA | 1 cut(s) | 316 |
| MspA1I | CMGCKG | 1 cut(s) | 1895 |
| MspCI | CTTAAG | 1 cut(s) | 935 |
| MspI | CCGG | 8 cut(s) | 407, 447, 484, 495, 509, 680, 958, 1093 |
| MspR9I | CCNGG | 6 cut(s) | 105, 161, 510, 738, 959, 1042 |
| MunI | CAATTG | 3 cut(s) | 169, 1259, 1626 |
| Mva1269I | GAATGC | 2 cut(s) | 1627, 1888 |
| MvaI | CCWGG | 4 cut(s) | 105, 161, 738, 1042 |
| MvnI | CGCG | 1 cut(s) | 1025 |
| NaeI | GCCGGC | 1 cut(s) | 496 |
| NciI | CCSGG | 2 cut(s) | 510, 959 |
| NgoMIV | GCCGGC | 1 cut(s) | 494 |
| NlaIII | CATG | 8 cut(s) | 400, 562, 1189, 1217, 1832, 1841, 2021, 2202 |
| NlaIV | GGNNCC | 4 cut(s) | 165, 402, 735, 813 |
| NmeAIII | GCCGAG | 1 cut(s) | 527 |
| NmuCI | GTSAC | 2 cut(s) | 784, 1522 |
| NsiI | ATGCAT | 1 cut(s) | 1839 |
| NspI | RCATGY | 2 cut(s) | 1217, 2202 |
| PaeI | GCATGC | 1 cut(s) | 1217 |
| PaeR7I | CTCGAG | 1 cut(s) | 1196 |
| PagI | TCATGA | 3 cut(s) | 1185, 1828, 2017 |
| PciI | ACATGT | 1 cut(s) | 2198 |
| PctI | GAATGC | 2 cut(s) | 1627, 1888 |
| PdiI | GCCGGC | 1 cut(s) | 496 |
| PfeI | GAWTC | 6 cut(s) | 307, 487, 521, 1189, 1579, 2272 |
| PflFI | GACNNNGTC | 2 cut(s) | 358, 1267 |
| PfoI | TCCNGGA | 2 cut(s) | 103, 508 |
| PkrI | GCNGC | 9 cut(s) | 263, 480, 500, 1546, 1766, 1798, 1950, 1978, 1987 |
| Ple19I | CGATCG | 1 cut(s) | 2145 |
| PleI | GAGTC | 5 cut(s) | 1258, 1582, 1737, 1951, 2308 |
| PpsI | GAGTC | 5 cut(s) | 1258, 1582, 1737, 1951, 2308 |
| PpuMI | RGGWCCY | 1 cut(s) | 733 |
| PscI | ACATGT | 1 cut(s) | 2198 |
| PsiI | TTATAA | 1 cut(s) | 2210 |
| Psp124BI | GAGCTC | 2 cut(s) | 349, 508 |
| Psp5II | RGGWCCY | 1 cut(s) | 733 |
| Psp6I | CCWGG | 4 cut(s) | 103, 159, 736, 1040 |
| PspFI | CCCAGC | 1 cut(s) | 1813 |
| PspGI | CCWGG | 4 cut(s) | 103, 159, 736, 1040 |
| PspN4I | GGNNCC | 4 cut(s) | 165, 402, 735, 813 |
| PspPI | GGNCC | 6 cut(s) | 97, 157, 682, 733, 812, 2224 |
| PspPPI | RGGWCCY | 1 cut(s) | 733 |
| PspXI | VCTCGAGB | 1 cut(s) | 1196 |
| PstI | CTGCAG | 2 cut(s) | 1162, 1990 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2284 |
| PsuI | RGATCY | 4 cut(s) | 337, 1162, 1702, 2319 |
| PsyI | GACNNNGTC | 2 cut(s) | 358, 1267 |
| PvuI | CGATCG | 1 cut(s) | 2145 |
| PvuII | CAGCTG | 1 cut(s) | 1895 |
| RsaI | GTAC | 4 cut(s) | 137, 1131, 1155, 1442 |
| RsaNI | GTAC | 4 cut(s) | 136, 1130, 1154, 1441 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1218, 2010 |
| SacI | GAGCTC | 2 cut(s) | 349, 508 |
| SaqAI | TTAA | 8 cut(s) | 35, 830, 936, 951, 1461, 1941, 2162, 2329 |
| SatI | GCNGC | 9 cut(s) | 262, 479, 499, 1545, 1765, 1797, 1949, 1977, 1986 |
| Sau96I | GGNCC | 6 cut(s) | 97, 157, 682, 733, 812, 2224 |
| SchI | GAGTC | 5 cut(s) | 1258, 1583, 1738, 1951, 2309 |
| ScrFI | CCNGG | 6 cut(s) | 105, 161, 510, 738, 959, 1042 |
| SduI | GDGCHC | 6 cut(s) | 168, 349, 508, 611, 1120, 1399 |
| SfaNI | GCATC | 7 cut(s) | 259, 904, 1314, 1380, 1387, 1800, 1831 |
| SfcI | CTRYAG | 4 cut(s) | 1158, 1986, 2038, 2276 |
| Sfr274I | CTCGAG | 1 cut(s) | 1196 |
| SinI | GGWCC | 4 cut(s) | 157, 682, 733, 2224 |
| SlaI | CTCGAG | 1 cut(s) | 1196 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1218, 2010 |
| SmlI | CTYRAG | 4 cut(s) | 935, 1133, 1196, 1475 |
| SmoI | CTYRAG | 4 cut(s) | 935, 1133, 1196, 1475 |
| SphI | GCATGC | 1 cut(s) | 1217 |
| SsiI | CCGC | 5 cut(s) | 367, 1361, 1490, 1745, 1949 |
| SspMI | CTAG | 1 cut(s) | 74 |
| SstI | GAGCTC | 2 cut(s) | 349, 508 |
| StyD4I | CCNGG | 6 cut(s) | 103, 159, 508, 736, 957, 1040 |
| StyI | CCWWGG | 3 cut(s) | 1785, 1791, 1968 |
| TaaI | ACNGT | 5 cut(s) | 360, 1611, 2167, 2228, 2286 |
| TaiI | ACGT | 3 cut(s) | 219, 620, 1620 |
| TaqI | TCGA | 8 cut(s) | 331, 743, 1197, 1577, 2023, 2141, 2153, 2303 |
| TaqII | GACCGA | 1 cut(s) | 1650 |
| TatI | WGTACW | 1 cut(s) | 1440 |
| TauI | GCSGC | 1 cut(s) | 1951 |
| TfiI | GAWTC | 6 cut(s) | 307, 487, 521, 1189, 1579, 2272 |
| Tru1I | TTAA | 8 cut(s) | 35, 830, 936, 951, 1461, 1941, 2162, 2329 |
| Tru9I | TTAA | 8 cut(s) | 35, 830, 936, 951, 1461, 1941, 2162, 2329 |
| TscAI | CASTG | 4 cut(s) | 184, 317, 356, 2134 |
| TseFI | GTSAC | 2 cut(s) | 784, 1522 |
| TseI | GCWGC | 8 cut(s) | 261, 478, 498, 1544, 1764, 1796, 1976, 1985 |
| Tsp45I | GTSAC | 2 cut(s) | 784, 1522 |
| TspGWI | ACGGA | 1 cut(s) | 1541 |
| TspRI | CASTG | 4 cut(s) | 184, 317, 356, 2134 |
| Tth111I | GACNNNGTC | 2 cut(s) | 358, 1267 |
| Vha464I | CTTAAG | 1 cut(s) | 935 |
| VneI | GTGCAC | 1 cut(s) | 1395 |
| VpaK11BI | GGWCC | 4 cut(s) | 157, 682, 733, 2224 |
| XapI | RAATTY | 5 cut(s) | 186, 1053, 1103, 2158, 2253 |
| XbaI | TCTAGA | 1 cut(s) | 73 |
| XceI | RCATGY | 2 cut(s) | 1217, 2202 |
| XhoI | CTCGAG | 1 cut(s) | 1196 |
| XspI | CTAG | 1 cut(s) | 74 |
| Zsp2I | ATGCAT | 1 cut(s) | 1839 |