Prupe.1G458600_v2.0.a1

Sarcosine oxidase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
38401461 .. 38403268
1808 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G458600.1

Sequence Viewer

Length: 1206 bp
ATGGAATATTCCGCCGATGAATTCGACGTCATCGTGGTCGGAGCCGGCATCATGGGCAGCTCCACCGCCTACCAGACAGCCAAGCGTGGCCAGAAGACCCTCCTCCTCGAGCAATTCGACTTCCTCCACCACCGCGGCTCCTCCCATGGCGAGTCCCGGACCATCCGCGCCACCTACCCGGAAGACTACTACACGCCATTGGTTCTCCAGTCCTACAAGCTCTGGCAGCAAGCCGAGTCCGAGATCGGCTACAATGTCTACTTCAAAGCTCACCAATTGGACATGGCCCCGGCAAACGATAAGGTTCTGCATGCCGTTGTTGAGAGCTGTCGTAAAAATTTGGTCCCCTTTCGGTTCATGAACCGGGACCAGCTGGATCGGGAGTTCTCGGGTCGGATTCGGATTCCGGAGGATTGGGTGGCCGTGGCGACGGAGCATGGTGGGGTTATTAAACCCACCAAGGCTGTGTCTATGTTTCAAACTCTTGCTCTGCAGAACGGTGCCGTTTTGAGGGACAATATGGGGGTGAAGGGTGTGGAGAGAGATGGGGTGAGAGGAGGGGTTTGGGTGTGCACAGAAAATGGAGAGAGGTTTTGGGGGAAGAAGTGTGTGGTGACCGTTGGGGCTTGGACTACGAAGTTAGTTAAAACGGTTGCTGGGATTGAGCTGCCTATAAAGCCATTGGAGACCACTGTTTGTTATTGGAGGATTAAGGAGGGGCATGAAGGTGGTTTTGCCATTGGAGGTGACTTTCCAACCTTTGCTAGCTATGGGGATACCTACATTTATGGGACACCCTCTTTGGAGTACCCCGGTTTGATCAAGGTTGCCGTGCATGGCGGGTACCCATGTGACCCGGATAAGAGGCCGTGGGGACCCGGGAACCCGCTGGCTCCGTTGAAGGAGTGGATTGAGGGGAGGTTCTCCGGTGTGGTTGACTCCGGTGGGCCTGTGGCCACTCAGCTGTGTATGTACTCCATGACCCCGGATGAGGACTTTGTGATTGATTTCTTGGGTGGGGAGTTTGGGAAGGATGTGGTGGTGGGTGGCGGGTTTTCGGGTCACGGGTTCAAGCTGTCTCCGGTGGTGGGGAGGATATTGGCTGACCTCGCACTTAGTGGGGAGGCTCAAGGTGTGGAGCTAAAGCACTTTAGAATAGCAAGGTTTCAAGAGAATCCTAAAGGCAATGTTAAAGACTTCCTATAG
Functional Annotation

Protein Analysis

402

Amino Acids

44.23

Weight (kDa)

6.09

Isoelectric Point (pI)

23.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013564)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 30
Acc65I GGTACC 1 cut(s) 843
AccB1I GGYRCC 2 cut(s) 500, 843
AccI GTMKAC 1 cut(s) 258
AccII CGCG 2 cut(s) 135, 168
AccIII TCCGGA 1 cut(s) 406
AciI CCGC 8 cut(s) 12, 66, 133, 135, 166, 840, 887, 1050
AclWI GGATC 1 cut(s) 384
AcoI YGGCCR 3 cut(s) 88, 420, 954
AcsI RAATTY 2 cut(s) 20, 337
AcyI GRCGYC 1 cut(s) 27
AdeI CACNNNGTG 1 cut(s) 1118
AfaI GTAC 3 cut(s) 809, 845, 974
AfiI CCNNNNNNNGG 3 cut(s) 510, 991, 1088
AgsI TTSAA 5 cut(s) 265, 479, 901, 1072, 1169
AloI GAACNNNNNNTCC 2 cut(s) 368, 400
Alw21I GWGCWC 1 cut(s) 575
Alw26I GTCTC 2 cut(s) 680, 1083
Alw44I GTGCAC 1 cut(s) 571
AlwI GGATC 1 cut(s) 384
Ama87I CYCGRG 3 cut(s) 107, 388, 878
Aor13HI TCCGGA 1 cut(s) 406
AoxI GGCC 6 cut(s) 88, 285, 420, 866, 947, 954
ApaLI GTGCAC 1 cut(s) 571
ApeKI GCWGC 3 cut(s) 57, 226, 667
ApoI RAATTY 2 cut(s) 20, 337
ArsI GACNNNNNNTTYG 2 cut(s) 784, 816
Asp718I GGTACC 1 cut(s) 843
AspLEI GCGC 1 cut(s) 170
AspS9I GGNCC 6 cut(s) 159, 286, 343, 367, 875, 947
AsuC2I CCSGG 9 cut(s) 157, 179, 290, 365, 813, 857, 879, 880, 986
AsuHPI GGTGA 5 cut(s) 263, 538, 562, 625, 758
AsuNHI GCTAGC 1 cut(s) 764
AvaI CYCGRG 3 cut(s) 107, 388, 878
AvaII GGWCC 4 cut(s) 159, 343, 367, 875
BaeGI GKGCMC 1 cut(s) 575
BaeI ACNNNNGTAYC 2 cut(s) 835, 868
BalI TGGCCA 2 cut(s) 90, 956
BanI GGYRCC 2 cut(s) 500, 843
BbsI GAAGAC 2 cut(s) 101, 189
Bbv12I GWGCWC 1 cut(s) 575
BbvI GCAGC 3 cut(s) 69, 238, 654
BccI CCATC 2 cut(s) 170, 539
BceAI ACGGC 5 cut(s) 299, 407, 488, 815, 853
BciVI GTATCC 1 cut(s) 769
BclI TGATCA 1 cut(s) 819
BcnI CCSGG 9 cut(s) 157, 179, 290, 365, 813, 857, 879, 880, 986
BcoDI GTCTC 2 cut(s) 680, 1083
BfaI CTAG 1 cut(s) 765
BfmI CTRYAG 2 cut(s) 491, 1202
BfuI GTATCC 1 cut(s) 769
BisI GCNGC 4 cut(s) 58, 136, 227, 668
BlsI GCNGC 4 cut(s) 59, 137, 228, 669
Bme1390I CCNGG 9 cut(s) 157, 179, 290, 365, 813, 857, 879, 880, 986
Bme18I GGWCC 4 cut(s) 159, 343, 367, 875
BmeT110I CYCGRG 3 cut(s) 107, 388, 878
BmgT120I GGNCC 6 cut(s) 159, 286, 343, 367, 875, 947
BmrFI CCNGG 9 cut(s) 157, 179, 290, 365, 813, 857, 879, 880, 986
BmsI GCATC 1 cut(s) 57
BmtI GCTAGC 1 cut(s) 768
BpiI GAAGAC 2 cut(s) 101, 189
BpmI CTGGAG 1 cut(s) 191
BpuEI CTTGAG 1 cut(s) 1113
BpuMI CCSGG 9 cut(s) 157, 179, 290, 365, 813, 857, 879, 880, 986
BsaHI GRCGYC 1 cut(s) 27
BsaI GGTCTC 1 cut(s) 680
BsaJI CCNNGG 9 cut(s) 133, 145, 288, 423, 459, 811, 869, 878, 984
BsaWI WCCGGW 4 cut(s) 406, 926, 941, 1081
BsaXI ACNNNNNCTCC 2 cut(s) 122, 152
Bsc4I CCNNNNNNNGG 3 cut(s) 510, 991, 1088
Bse118I RCCGGY 1 cut(s) 44
Bse1I ACTGG 1 cut(s) 208
Bse3DI GCAATG 1 cut(s) 1192
BseAI TCCGGA 1 cut(s) 406
BseDI CCNNGG 9 cut(s) 133, 145, 288, 423, 459, 811, 869, 878, 984
BseGI GGATG 3 cut(s) 162, 994, 1039
BseLI CCNNNNNNNGG 3 cut(s) 510, 991, 1088
BseMI GCAATG 1 cut(s) 1192
BseMII CTCAG 1 cut(s) 974
BseNI ACTGG 1 cut(s) 208
BseRI GAGGAG 4 cut(s) 92, 95, 130, 570
BseSI GKGCMC 1 cut(s) 575
BseXI GCAGC 3 cut(s) 69, 238, 654
BseYI CCCAGC 1 cut(s) 656
Bsh1236I CGCG 2 cut(s) 135, 168
BshFI GGCC 6 cut(s) 90, 287, 422, 868, 949, 956
BshNI GGYRCC 2 cut(s) 500, 843
BsiHKAI GWGCWC 1 cut(s) 575
BsiHKCI CYCGRG 3 cut(s) 107, 388, 878
BslFI GGGAC 6 cut(s) 139, 329, 380, 527, 805, 888
BslI CCNNNNNNNGG 3 cut(s) 510, 991, 1088
BsmAI GTCTC 2 cut(s) 680, 1083
BsmFI GGGAC 6 cut(s) 139, 329, 380, 527, 805, 888
BsnI GGCC 6 cut(s) 90, 287, 422, 868, 949, 956
Bso31I GGTCTC 1 cut(s) 680
BsoBI CYCGRG 3 cut(s) 107, 388, 878
Bsp1286I GDGCHC 1 cut(s) 575
Bsp13I TCCGGA 1 cut(s) 406
Bsp143I GATC 3 cut(s) 243, 376, 819
Bsp19I CCATGG 1 cut(s) 145
BspACI CCGC 8 cut(s) 12, 66, 133, 135, 166, 840, 887, 1050
BspANI GGCC 6 cut(s) 90, 287, 422, 868, 949, 956
BspCNI CTCAG 1 cut(s) 973
BspEI TCCGGA 1 cut(s) 406
BspFNI CGCG 2 cut(s) 135, 168
BspHI TCATGA 1 cut(s) 357
BspMAI CTGCAG 1 cut(s) 495
BspOI GCTAGC 1 cut(s) 768
BspPI GGATC 1 cut(s) 384
BspT107I GGYRCC 2 cut(s) 500, 843
BspTNI GGTCTC 1 cut(s) 680
BsrDI GCAATG 1 cut(s) 1192
BsrFI RCCGGY 1 cut(s) 44
BsrI ACTGG 1 cut(s) 208
BssAI RCCGGY 1 cut(s) 44
BssECI CCNNGG 9 cut(s) 133, 145, 288, 423, 459, 811, 869, 878, 984
BssMI GATC 3 cut(s) 243, 376, 819
BssNI GRCGYC 1 cut(s) 27
BssT1I CCWWGG 2 cut(s) 145, 459
Bst4CI ACNGT 4 cut(s) 500, 619, 652, 694
BstACI GRCGYC 1 cut(s) 27
BstC8I GCNNGC 5 cut(s) 46, 231, 312, 766, 891
BstDEI CTNAG 2 cut(s) 960, 1115
BstDSI CCRYGG 4 cut(s) 133, 145, 423, 869
BstEII GGTNACC 1 cut(s) 613
BstF5I GGATG 3 cut(s) 162, 994, 1039
BstFNI CGCG 2 cut(s) 135, 168
BstHHI GCGC 1 cut(s) 170
BstKTI GATC 3 cut(s) 246, 379, 822
BstMAI GTCTC 2 cut(s) 680, 1083
BstMBI GATC 3 cut(s) 243, 376, 819
BstMWI GCNNNNNNNGC 4 cut(s) 54, 226, 676, 1109
BstNSI RCATGY 1 cut(s) 314
BstPI GGTNACC 1 cut(s) 613
BstSCI CCNGG 9 cut(s) 155, 177, 288, 363, 811, 855, 877, 878, 984
BstSFI CTRYAG 2 cut(s) 491, 1202
BstSLI GKGCMC 1 cut(s) 575
BstUI CGCG 2 cut(s) 135, 168
BstV1I GCAGC 3 cut(s) 69, 238, 654
BstV2I GAAGAC 2 cut(s) 101, 189
BsuI GTATCC 1 cut(s) 769
BsuRI GGCC 6 cut(s) 90, 287, 422, 868, 949, 956
BtgI CCRYGG 4 cut(s) 133, 145, 423, 869
BtsCI GGATG 3 cut(s) 162, 994, 1039
BtsIMutI CAGTG 1 cut(s) 690
Cac8I GCNNGC 5 cut(s) 46, 231, 312, 766, 891
CciI TCATGA 1 cut(s) 357
CfoI GCGC 1 cut(s) 170
Cfr10I RCCGGY 1 cut(s) 44
Cfr13I GGNCC 6 cut(s) 159, 286, 343, 367, 875, 947
Cfr42I CCGCGG 1 cut(s) 136
Cfr9I CCCGGG 1 cut(s) 878
Csp6I GTAC 3 cut(s) 808, 844, 973
CviQI GTAC 3 cut(s) 808, 844, 973
DdeI CTNAG 2 cut(s) 960, 1115
DpnI GATC 3 cut(s) 245, 378, 821
DpnII GATC 3 cut(s) 243, 376, 819
DraIII CACNNNGTG 1 cut(s) 1118
EaeI YGGCCR 3 cut(s) 88, 420, 954
Eco130I CCWWGG 2 cut(s) 145, 459
Eco31I GGTCTC 1 cut(s) 680
Eco47I GGWCC 4 cut(s) 159, 343, 367, 875
Eco88I CYCGRG 3 cut(s) 107, 388, 878
Eco91I GGTNACC 1 cut(s) 613
EcoO109I RGGNCCY 1 cut(s) 875
EcoO65I GGTNACC 1 cut(s) 613
EcoRI GAATTC 1 cut(s) 20
EcoT14I CCWWGG 2 cut(s) 145, 459
ErhI CCWWGG 2 cut(s) 145, 459
FaqI GGGAC 6 cut(s) 139, 329, 380, 527, 805, 888
FauI CCCGC 3 cut(s) 833, 894, 1043
FbaI TGATCA 1 cut(s) 819
FblI GTMKAC 1 cut(s) 258
Fnu4HI GCNGC 4 cut(s) 58, 136, 227, 668
FokI GGATG 3 cut(s) 149, 1001, 1046
Fsp4HI GCNGC 4 cut(s) 58, 136, 227, 668
FspBI CTAG 1 cut(s) 765
GlaI GCGC 1 cut(s) 169
GluI GCNGC 4 cut(s) 58, 136, 227, 668
GsaI CCCAGC 1 cut(s) 660
GsuI CTGGAG 1 cut(s) 191
HaeIII GGCC 6 cut(s) 90, 287, 422, 868, 949, 956
HhaI GCGC 1 cut(s) 170
Hin1I GRCGYC 1 cut(s) 27
Hin6I GCGC 1 cut(s) 168
HinP1I GCGC 1 cut(s) 168
HincII GTYRAC 1 cut(s) 937
HindII GTYRAC 1 cut(s) 937
HinfI GANTC 6 cut(s) 152, 236, 397, 403, 938, 1174
HphI GGTGA 5 cut(s) 263, 538, 562, 625, 758
Hpy166II GTNNAC 3 cut(s) 259, 573, 937
Hpy188I TCNGA 4 cut(s) 41, 241, 396, 402
Hpy188III TCNNGA 4 cut(s) 358, 380, 407, 1169
Hpy8I GTNNAC 3 cut(s) 259, 573, 937
Hpy99I CGWCG 2 cut(s) 29, 433
HpyAV CCTTC 4 cut(s) 523, 719, 895, 1024
HpyCH4III ACNGT 4 cut(s) 500, 619, 652, 694
HpyCH4IV ACGT 1 cut(s) 27
HpyCH4V TGCA 4 cut(s) 310, 493, 573, 835
HpyF10VI GCNNNNNNNGC 4 cut(s) 54, 226, 676, 1109
HpyF3I CTNAG 2 cut(s) 960, 1115
HpySE526I ACGT 1 cut(s) 27
Hsp92I GRCGYC 1 cut(s) 27
HspAI GCGC 1 cut(s) 168
KflI GGGWCCC 1 cut(s) 875
Kpn2I TCCGGA 1 cut(s) 406
KpnI GGTACC 1 cut(s) 847
KroI GCCGGC 1 cut(s) 44
KroNI GCCGGC 1 cut(s) 46
Ksp22I TGATCA 1 cut(s) 819
KspI CCGCGG 1 cut(s) 136
Kzo9I GATC 3 cut(s) 243, 376, 819
LmnI GCTCC 6 cut(s) 41, 65, 143, 433, 898, 1138
Lsp1109I GCAGC 3 cut(s) 69, 238, 654
LweI GCATC 1 cut(s) 57
MaeI CTAG 1 cut(s) 765
MaeII ACGT 1 cut(s) 27
MaeIII GTNAC 4 cut(s) 613, 746, 851, 1061
MalI GATC 3 cut(s) 245, 378, 821
MboI GATC 3 cut(s) 243, 376, 819
MboII GAAGA 3 cut(s) 106, 194, 613
MfeI CAATTG 1 cut(s) 275
MhlI GDGCHC 1 cut(s) 575
MlsI TGGCCA 2 cut(s) 90, 956
MluCI AATT 4 cut(s) 20, 113, 275, 337
MluNI TGGCCA 2 cut(s) 90, 956
MlyI GAGTC 3 cut(s) 161, 245, 932
MmeI TCCRAC 3 cut(s) 19, 374, 779
Mox20I TGGCCA 2 cut(s) 90, 956
MroI TCCGGA 1 cut(s) 406
MroNI GCCGGC 1 cut(s) 44
MscI TGGCCA 2 cut(s) 90, 956
MseI TTAA 4 cut(s) 450, 645, 711, 1191
MslI CAYNNNNRTG 1 cut(s) 726
Msp20I TGGCCA 2 cut(s) 90, 956
MspA1I CMGCKG 4 cut(s) 135, 373, 889, 964
MspR9I CCNGG 9 cut(s) 157, 179, 290, 365, 813, 857, 879, 880, 986
MunI CAATTG 1 cut(s) 275
MvnI CGCG 2 cut(s) 135, 168
MwoI GCNNNNNNNGC 4 cut(s) 54, 226, 676, 1109
NaeI GCCGGC 1 cut(s) 46
NciI CCSGG 9 cut(s) 157, 179, 290, 365, 813, 857, 879, 880, 986
NcoI CCATGG 1 cut(s) 145
NdeII GATC 3 cut(s) 243, 376, 819
NgoMIV GCCGGC 1 cut(s) 44
NheI GCTAGC 1 cut(s) 764
NmeAIII GCCGAG 1 cut(s) 259
NmuCI GTSAC 4 cut(s) 613, 746, 851, 1061
NspI RCATGY 1 cut(s) 314
PaeI GCATGC 1 cut(s) 314
PaeR7I CTCGAG 1 cut(s) 107
PagI TCATGA 1 cut(s) 357
PcsI WCGNNNNNNNCGW 2 cut(s) 30, 114
PdiI GCCGGC 1 cut(s) 46
PfeI GAWTC 3 cut(s) 397, 403, 1174
PfoI TCCNGGA 1 cut(s) 155
PkrI GCNGC 4 cut(s) 59, 137, 228, 669
PleI GAGTC 3 cut(s) 160, 244, 932
PpsI GAGTC 3 cut(s) 160, 244, 932
PpuMI RGGWCCY 1 cut(s) 875
Psp5II RGGWCCY 1 cut(s) 875
PspEI GGTNACC 1 cut(s) 613
PspFI CCCAGC 1 cut(s) 656
PspPI GGNCC 6 cut(s) 159, 286, 343, 367, 875, 947
PspPPI RGGWCCY 1 cut(s) 875
PspXI VCTCGAGB 1 cut(s) 107
PstI CTGCAG 1 cut(s) 495
PvuII CAGCTG 2 cut(s) 373, 964
RsaI GTAC 3 cut(s) 809, 845, 974
RsaNI GTAC 3 cut(s) 808, 844, 973
RseI CAYNNNNRTG 1 cut(s) 726
SacII CCGCGG 1 cut(s) 136
SaqAI TTAA 4 cut(s) 450, 645, 711, 1191
SatI GCNGC 4 cut(s) 58, 136, 227, 668
Sau3AI GATC 3 cut(s) 243, 376, 819
Sau96I GGNCC 6 cut(s) 159, 286, 343, 367, 875, 947
SchI GAGTC 3 cut(s) 161, 245, 932
ScrFI CCNGG 9 cut(s) 157, 179, 290, 365, 813, 857, 879, 880, 986
SduI GDGCHC 1 cut(s) 575
SfaNI GCATC 1 cut(s) 57
SfcI CTRYAG 2 cut(s) 491, 1202
Sfr274I CTCGAG 1 cut(s) 107
Sfr303I CCGCGG 1 cut(s) 136
SgrBI CCGCGG 1 cut(s) 136
SinI GGWCC 4 cut(s) 159, 343, 367, 875
SlaI CTCGAG 1 cut(s) 107
SmaI CCCGGG 1 cut(s) 880
SmiMI CAYNNNNRTG 1 cut(s) 726
SmlI CTYRAG 2 cut(s) 107, 1128
SmoI CTYRAG 2 cut(s) 107, 1128
SphI GCATGC 1 cut(s) 314
Sse9I AATT 4 cut(s) 20, 113, 275, 337
SsiI CCGC 8 cut(s) 12, 66, 133, 135, 166, 840, 887, 1050
SspI AATATT 1 cut(s) 8
SspMI CTAG 1 cut(s) 765
StyD4I CCNGG 9 cut(s) 155, 177, 288, 363, 811, 855, 877, 878, 984
StyI CCWWGG 2 cut(s) 145, 459
TaaI ACNGT 4 cut(s) 500, 619, 652, 694
TaiI ACGT 1 cut(s) 30
TaqI TCGA 3 cut(s) 24, 108, 117
TasI AATT 4 cut(s) 20, 113, 275, 337
TatI WGTACW 1 cut(s) 972
TauI GCSGC 1 cut(s) 138
TfiI GAWTC 3 cut(s) 397, 403, 1174
Tru1I TTAA 4 cut(s) 450, 645, 711, 1191
Tru9I TTAA 4 cut(s) 450, 645, 711, 1191
TscAI CASTG 1 cut(s) 697
TseFI GTSAC 4 cut(s) 613, 746, 851, 1061
TseI GCWGC 3 cut(s) 57, 226, 667
Tsp45I GTSAC 4 cut(s) 613, 746, 851, 1061
TspDTI ATGAA 4 cut(s) 33, 346, 374, 738
TspGWI ACGGA 2 cut(s) 446, 885
TspMI CCCGGG 1 cut(s) 878
TspRI CASTG 1 cut(s) 697
VneI GTGCAC 1 cut(s) 571
VpaK11BI GGWCC 4 cut(s) 159, 343, 367, 875
XapI RAATTY 2 cut(s) 20, 337
XceI RCATGY 1 cut(s) 314
XhoI CTCGAG 1 cut(s) 107
XmaI CCCGGG 1 cut(s) 878
XmiI GTMKAC 1 cut(s) 258
XspI CTAG 1 cut(s) 765
ZraI GACGTC 1 cut(s) 28
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.