Prupe.1G473600_v2.0.a1

Ammonium transporter 3 member 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0016764
Physical Location & Seq
Forward (+)
39344440 .. 39346467
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G473600.1

Sequence Viewer

Length: 1443 bp
ATGAGCAACAGCACCTATCCACCTCTGCCTAGCAACCTCCTACCGGATCCTGCTAATCCGGACTGGATGAACAAAGCTGACAACGCGTGGCAGCTGACAGCCGCGACGCTGGTTGGCCTCCAGAGTGTCCCGGGGCTCATAATCCTATACGGTGGTGCAGTGAAGAAGAAATGGGCTGTGAATTCAGCTTTCATGGCACTCTATGCATTTGCTTGTGTTCTTGTTTGTTGGGTTGGGTGGGGATATCATATGTCATTTGGGGAAACTCTGATTAAGGGAGTTCCATTTTGGGGGAAAGCTGATGTGGCATTGAACCAAAAGTATCTCCTGGAGCAGGCATTTAGTGGGAAGTTCCCAAATGCTACAATGGTGTATTTCCAATTTGTGTTTGCAGCAATTACTTTGATTTTGATTGCTGGGGCCCTCTTGGGTAGGATGAACTTTTATGCTTGGATGCTGTTTGTGCCTTTGTGGTTGACCTTTTCATACACCATTGGAGCATTTAGTATCTGGAGCCCTAAAGGTTTCCTCTTCAAGAAAGGACTGATAGATTATTCTGGTGGGTTTGTGATCCATTTGTCTTCTGGAGTTGCTGGTTTCACAGCAGCCTATTGGGTTGGTCCTCGTTCGAACAAGGACAGGGAAAGATTCCCTCCCAACAACATTCTTCTTATGTTGACTGGTGCAGGACTCCTCTGGATGGGCTGGACAGGGTTCAATGGAGGAGACCCTTATGTAGTCAGTGTTGATGCTTCCTTGGCTGTCTTGAACACTCATGTATGCACTGCTACCAGTTTGCTCACTTGGCTCCTGCTTGACCTCATTTTTTTCCGCAAGCCTTCGGTCATCGGGGCAGTTCAAGGCATGATCACTGGTTTGGTTTGCATCACCCCAGCTGCTGGAGTTGTGCAAGGTTGGGCAGCCATACTAATGGGGCTATTTTCTGGCTCAATTCCTTGGTTCACCATGATGGTTGTCCACAAGAAATCTGCGCTCCTTCAAAAAGTTGATGACACAATGGCTGTTCTGCACACTCATGCCATCGCCGGCGCCCTTGGTGGAATCCTCACCGGTCTCTTTGCCCATCCGAGGCTCTGCTTCCTGTTCACTACCTCATATGGACAGTATGTTGGCCTATTCTACGGTTTTAAAATGGAAGTTGTCCATACCGGGTTTCGTCAACTGGGAATTCAACTTCTTGGGATATTTTACGTTGTCATTCTAAATGTTGTAGTTACCAGCCTTATATGTGTTTTGATCCAATTCATCGTGCCTCTAAGAATGTCCGATGCGGATATGGAGATCGGTGATGAAGCAGCTCATGGGGAAGAAGCTTATGCCATCTGGGGTCAAGGTGAAAAGCTTGAAAATTCTAGGTATGGATATGATATTGAGTCGTCAGCCAAAAATAGACATGCTGCTGGCCAAATTGAGATGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ammonium_transp

Protein Analysis

481

Amino Acids

52.48

Weight (kDa)

8.11

Isoelectric Point (pI)

31.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0016764)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g29590
malus_domestica MD08G1145400.v1.1 MD15G1121000.v1.1
prunus_persica Prupe.1G473600_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0298571
rosa_laevigata RLG00000011503
rosa_multiflora Rmu_sc0004500.1_g000011
rosa_roxburghii Rroxscaffold_7G00169530
rosa_rugosa Rorug06G0281000
rosa_samantha Rh6AG392600 Rh6BG400400 Rh6CG406300 Rh6DG393000
rosa_wichuraiana Rw6G034320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1049
AccB7I CCANNNNNTGG 1 cut(s) 899
AccII CGCG 2 cut(s) 86, 104
AccIII TCCGGA 1 cut(s) 58
AciI CCGC 3 cut(s) 102, 832, 1292
AclWI GGATC 4 cut(s) 41, 54, 565, 1252
AcoI YGGCCR 1 cut(s) 1423
AcsI RAATTY 3 cut(s) 181, 1188, 1369
AcyI GRCGYC 1 cut(s) 1050
AfiI CCNNNNNNNGG 6 cut(s) 43, 290, 334, 700, 899, 1089
AflIII ACRYGT 1 cut(s) 84
AgeI ACCGGT 1 cut(s) 1070
AgsI TTSAA 8 cut(s) 313, 535, 718, 769, 860, 1001, 1193, 1367
AjnI CCWGG 1 cut(s) 327
AluBI AGCT 8 cut(s) 77, 94, 188, 299, 896, 1319, 1334, 1363
AluI AGCT 8 cut(s) 77, 94, 188, 299, 896, 1319, 1334, 1363
Alw26I GTCTC 2 cut(s) 720, 1079
AlwI GGATC 4 cut(s) 41, 54, 565, 1252
AlwNI CAGNNNCTG 1 cut(s) 899
Ama87I CYCGRG 1 cut(s) 130
Aor13HI TCCGGA 1 cut(s) 58
AoxI GGCC 5 cut(s) 115, 420, 1132, 1423, 1437
ApaI GGGCCC 1 cut(s) 424
ApeKI GCWGC 7 cut(s) 91, 392, 605, 896, 920, 1316, 1418
ApoI RAATTY 3 cut(s) 181, 1188, 1369
AsiGI ACCGGT 1 cut(s) 1070
AspLEI GCGC 2 cut(s) 994, 1052
AspS9I GGNCC 3 cut(s) 420, 421, 620
AsuC2I CCSGG 3 cut(s) 131, 132, 1171
AsuHPI GGTGA 5 cut(s) 880, 955, 1060, 1319, 1367
AsuII TTCGAA 1 cut(s) 629
AvaI CYCGRG 1 cut(s) 130
AvaII GGWCC 1 cut(s) 620
BaeGI GKGCMC 1 cut(s) 424
BalI TGGCCA 1 cut(s) 1425
BamHI GGATCC 1 cut(s) 46
BanI GGYRCC 1 cut(s) 1049
BanII GRGCYC 3 cut(s) 138, 424, 518
BbsI GAAGAC 1 cut(s) 573
BbvI GCAGC 7 cut(s) 103, 404, 617, 883, 932, 1328, 1405
BccI CCATC 6 cut(s) 694, 964, 1049, 1092, 1349, 1429
BciT130I CCWGG 1 cut(s) 329
BclI TGATCA 1 cut(s) 867
BcnI CCSGG 3 cut(s) 131, 132, 1171
BcoDI GTCTC 2 cut(s) 720, 1079
BfaI CTAG 2 cut(s) 30, 1374
BfoI RGCGCY 1 cut(s) 1053
BisI GCNGC 8 cut(s) 92, 102, 393, 606, 897, 921, 1317, 1419
BlsI GCNGC 8 cut(s) 93, 103, 394, 607, 898, 922, 1318, 1420
Bme1390I CCNGG 4 cut(s) 131, 132, 329, 1171
Bme18I GGWCC 1 cut(s) 620
BmeT110I CYCGRG 1 cut(s) 130
BmgT120I GGNCC 3 cut(s) 420, 421, 620
BmiI GGNNCC 6 cut(s) 48, 421, 422, 515, 809, 1051
BmrFI CCNGG 4 cut(s) 131, 132, 329, 1171
BmrI ACTGGG 1 cut(s) 1193
BmsI GCATC 4 cut(s) 444, 739, 894, 1279
BmuI ACTGGG 1 cut(s) 1193
BpiI GAAGAC 1 cut(s) 573
BpmI CTGGAG 5 cut(s) 104, 350, 532, 606, 921
Bpu14I TTCGAA 1 cut(s) 629
BpuMI CCSGG 3 cut(s) 131, 132, 1171
BsaHI GRCGYC 1 cut(s) 1050
BsaI GGTCTC 2 cut(s) 720, 1079
BsaJI CCNNGG 6 cut(s) 130, 131, 756, 956, 1054, 1088
BsaWI WCCGGW 3 cut(s) 43, 58, 1070
Bsc4I CCNNNNNNNGG 6 cut(s) 43, 290, 334, 700, 899, 1089
Bse118I RCCGGY 2 cut(s) 1046, 1070
Bse1I ACTGG 5 cut(s) 68, 685, 792, 877, 1188
BseAI TCCGGA 1 cut(s) 58
BseBI CCWGG 1 cut(s) 329
BseDI CCNNGG 6 cut(s) 130, 131, 756, 956, 1054, 1088
BseGI GGATG 5 cut(s) 72, 441, 459, 705, 1084
BseLI CCNNNNNNNGG 6 cut(s) 43, 290, 334, 700, 899, 1089
BseNI ACTGG 5 cut(s) 68, 685, 792, 877, 1188
BseRI GAGGAG 2 cut(s) 683, 738
BseSI GKGCMC 1 cut(s) 424
BseXI GCAGC 7 cut(s) 103, 404, 617, 883, 932, 1328, 1405
BseYI CCCAGC 2 cut(s) 416, 892
BsgI GTGCAG 3 cut(s) 177, 705, 1013
Bsh1236I CGCG 2 cut(s) 86, 104
BshFI GGCC 5 cut(s) 117, 422, 1134, 1425, 1439
BshNI GGYRCC 1 cut(s) 1049
BshTI ACCGGT 1 cut(s) 1070
BsiHKCI CYCGRG 1 cut(s) 130
BsiSI CCGG 6 cut(s) 44, 59, 131, 1047, 1071, 1170
BslFI GGGAC 1 cut(s) 113
BslI CCNNNNNNNGG 6 cut(s) 43, 290, 334, 700, 899, 1089
BsmAI GTCTC 2 cut(s) 720, 1079
BsmFI GGGAC 1 cut(s) 113
BsnI GGCC 5 cut(s) 117, 422, 1134, 1425, 1439
Bso31I GGTCTC 2 cut(s) 720, 1079
BsoBI CYCGRG 1 cut(s) 130
Bsp119I TTCGAA 1 cut(s) 629
Bsp120I GGGCCC 1 cut(s) 420
Bsp1286I GDGCHC 3 cut(s) 138, 424, 518
Bsp13I TCCGGA 1 cut(s) 58
Bsp143I GATC 5 cut(s) 46, 570, 867, 1257, 1302
BspACI CCGC 3 cut(s) 102, 832, 1292
BspANI GGCC 5 cut(s) 117, 422, 1134, 1425, 1439
BspEI TCCGGA 1 cut(s) 58
BspFNI CGCG 2 cut(s) 86, 104
BspLI GGNNCC 6 cut(s) 48, 421, 422, 515, 809, 1051
BspPI GGATC 4 cut(s) 41, 54, 565, 1252
BspT104I TTCGAA 1 cut(s) 629
BspT107I GGYRCC 1 cut(s) 1049
BspTNI GGTCTC 2 cut(s) 720, 1079
BsrFI RCCGGY 2 cut(s) 1046, 1070
BsrI ACTGG 5 cut(s) 68, 685, 792, 877, 1188
BssAI RCCGGY 2 cut(s) 1046, 1070
BssECI CCNNGG 6 cut(s) 130, 131, 756, 956, 1054, 1088
BssMI GATC 5 cut(s) 46, 570, 867, 1257, 1302
BssNI GRCGYC 1 cut(s) 1050
BssT1I CCWWGG 3 cut(s) 756, 956, 1054
Bst2UI CCWGG 1 cut(s) 329
Bst4CI ACNGT 3 cut(s) 152, 1125, 1145
Bst6I CTCTTC 1 cut(s) 536
BstACI GRCGYC 1 cut(s) 1050
BstAPI GCANNNNNTGC 1 cut(s) 203
BstBI TTCGAA 1 cut(s) 629
BstC8I GCNNGC 4 cut(s) 336, 836, 1048, 1423
BstDEI CTNAG 1 cut(s) 1277
BstENI CCTNNNNNAGG 1 cut(s) 332
BstF5I GGATG 5 cut(s) 72, 441, 459, 705, 1084
BstFNI CGCG 2 cut(s) 86, 104
BstH2I RGCGCY 1 cut(s) 1053
BstHHI GCGC 2 cut(s) 994, 1052
BstKTI GATC 5 cut(s) 49, 573, 870, 1260, 1305
BstMAI GTCTC 2 cut(s) 720, 1079
BstMBI GATC 5 cut(s) 46, 570, 867, 1257, 1302
BstMWI GCNNNNNNNGC 7 cut(s) 83, 194, 203, 305, 463, 758, 805
BstNI CCWGG 1 cut(s) 329
BstNSI RCATGY 1 cut(s) 1418
BstSCI CCNGG 4 cut(s) 129, 130, 327, 1169
BstSLI GKGCMC 1 cut(s) 424
BstUI CGCG 2 cut(s) 86, 104
BstV1I GCAGC 7 cut(s) 103, 404, 617, 883, 932, 1328, 1405
BstV2I GAAGAC 1 cut(s) 573
BstX2I RGATCY 1 cut(s) 46
BstXI CCANNNNNNTGG 1 cut(s) 931
BstYI RGATCY 1 cut(s) 46
BsuRI GGCC 5 cut(s) 117, 422, 1134, 1425, 1439
BtgZI GCGATG 1 cut(s) 1027
BtsCI GGATG 5 cut(s) 72, 441, 459, 705, 1084
BtsI GCAGTG 2 cut(s) 165, 783
BtsIMutI CAGTG 4 cut(s) 165, 748, 783, 870
Cac8I GCNNGC 4 cut(s) 336, 836, 1048, 1423
CaiI CAGNNNCTG 1 cut(s) 899
CfoI GCGC 2 cut(s) 994, 1052
Cfr10I RCCGGY 2 cut(s) 1046, 1070
Cfr13I GGNCC 3 cut(s) 420, 421, 620
Cfr9I CCCGGG 1 cut(s) 130
CseI GACGC 1 cut(s) 115
CspAI ACCGGT 1 cut(s) 1070
CviAII CATG 7 cut(s) 193, 776, 865, 967, 1037, 1322, 1415
DdeI CTNAG 1 cut(s) 1277
DinI GGCGCC 1 cut(s) 1051
DpnI GATC 5 cut(s) 48, 572, 869, 1259, 1304
DpnII GATC 5 cut(s) 46, 570, 867, 1257, 1302
DraI TTTAAA 1 cut(s) 1150
EaeI YGGCCR 1 cut(s) 1423
Eam1104I CTCTTC 1 cut(s) 536
EarI CTCTTC 1 cut(s) 536
Eco130I CCWWGG 3 cut(s) 756, 956, 1054
Eco24I GRGCYC 3 cut(s) 138, 424, 518
Eco31I GGTCTC 2 cut(s) 720, 1079
Eco32I GATATC 1 cut(s) 245
Eco47I GGWCC 1 cut(s) 620
Eco88I CYCGRG 1 cut(s) 130
EcoNI CCTNNNNNAGG 1 cut(s) 332
EcoO109I RGGNCCY 2 cut(s) 420, 421
EcoRI GAATTC 2 cut(s) 181, 1188
EcoRII CCWGG 1 cut(s) 327
EcoRV GATATC 1 cut(s) 245
EcoT14I CCWWGG 3 cut(s) 756, 956, 1054
EcoT22I ATGCAT 1 cut(s) 208
EcoT38I GRGCYC 3 cut(s) 138, 424, 518
EgeI GGCGCC 1 cut(s) 1051
EheI GGCGCC 1 cut(s) 1051
ErhI CCWWGG 3 cut(s) 756, 956, 1054
FaeI CATG 7 cut(s) 196, 779, 868, 970, 1040, 1325, 1418
FaqI GGGAC 1 cut(s) 113
FatI CATG 7 cut(s) 192, 775, 864, 966, 1036, 1321, 1414
FauNDI CATATG 2 cut(s) 249, 1117
FbaI TGATCA 1 cut(s) 867
Fnu4HI GCNGC 8 cut(s) 92, 102, 393, 606, 897, 921, 1317, 1419
FokI GGATG 5 cut(s) 79, 448, 466, 712, 1071
FriOI GRGCYC 3 cut(s) 138, 424, 518
Fsp4HI GCNGC 8 cut(s) 92, 102, 393, 606, 897, 921, 1317, 1419
FspBI CTAG 2 cut(s) 30, 1374
GlaI GCGC 2 cut(s) 993, 1051
GluI GCNGC 8 cut(s) 92, 102, 393, 606, 897, 921, 1317, 1419
GsaI CCCAGC 2 cut(s) 420, 896
GsuI CTGGAG 5 cut(s) 104, 350, 532, 606, 921
HaeII RGCGCY 1 cut(s) 1053
HaeIII GGCC 5 cut(s) 117, 422, 1134, 1425, 1439
HapII CCGG 6 cut(s) 44, 59, 131, 1047, 1071, 1170
HgaI GACGC 1 cut(s) 115
HhaI GCGC 2 cut(s) 994, 1052
Hin1I GRCGYC 1 cut(s) 1050
Hin1II CATG 7 cut(s) 196, 779, 868, 970, 1040, 1325, 1418
Hin6I GCGC 2 cut(s) 992, 1050
HinP1I GCGC 2 cut(s) 992, 1050
HincII GTYRAC 3 cut(s) 477, 678, 1181
HindII GTYRAC 3 cut(s) 477, 678, 1181
HindIII AAGCTT 2 cut(s) 1332, 1361
HinfI GANTC 4 cut(s) 648, 690, 1062, 1394
HpaII CCGG 6 cut(s) 44, 59, 131, 1047, 1071, 1170
HphI GGTGA 5 cut(s) 880, 955, 1060, 1319, 1367
Hpy166II GTNNAC 6 cut(s) 477, 678, 963, 979, 1107, 1181
Hpy188I TCNGA 3 cut(s) 270, 1089, 1288
Hpy188III TCNNGA 7 cut(s) 59, 121, 511, 535, 585, 697, 766
Hpy8I GTNNAC 6 cut(s) 477, 678, 963, 979, 1107, 1181
Hpy99I CGWCG 1 cut(s) 109
HpyAV CCTTC 2 cut(s) 849, 1007
HpyCH4III ACNGT 3 cut(s) 152, 1125, 1145
HpyCH4IV ACGT 1 cut(s) 1212
HpyCH4V TGCA 8 cut(s) 158, 206, 392, 686, 783, 885, 910, 1030
HpyF10VI GCNNNNNNNGC 7 cut(s) 83, 194, 203, 305, 463, 758, 805
HpyF3I CTNAG 1 cut(s) 1277
HpySE526I ACGT 1 cut(s) 1212
Hsp92I GRCGYC 1 cut(s) 1050
Hsp92II CATG 7 cut(s) 196, 779, 868, 970, 1040, 1325, 1418
HspAI GCGC 2 cut(s) 992, 1050
KasI GGCGCC 1 cut(s) 1049
Kpn2I TCCGGA 1 cut(s) 58
KroI GCCGGC 1 cut(s) 1046
KroNI GCCGGC 1 cut(s) 1048
Ksp22I TGATCA 1 cut(s) 867
Kzo9I GATC 5 cut(s) 46, 570, 867, 1257, 1302
LmnI GCTCC 5 cut(s) 331, 497, 513, 813, 999
Lsp1109I GCAGC 7 cut(s) 103, 404, 617, 883, 932, 1328, 1405
LweI GCATC 4 cut(s) 444, 739, 894, 1279
MaeI CTAG 2 cut(s) 30, 1374
MaeII ACGT 1 cut(s) 1212
MaeIII GTNAC 1 cut(s) 1234
MalI GATC 5 cut(s) 48, 572, 869, 1259, 1304
MboI GATC 5 cut(s) 46, 570, 867, 1257, 1302
MboII GAAGA 6 cut(s) 175, 178, 523, 573, 659, 1340
MflI RGATCY 1 cut(s) 46
MhlI GDGCHC 3 cut(s) 138, 424, 518
MlsI TGGCCA 1 cut(s) 1425
MluCI AATT 8 cut(s) 181, 380, 396, 951, 1188, 1262, 1369, 1428
MluI ACGCGT 1 cut(s) 84
MluNI TGGCCA 1 cut(s) 1425
Mly113I GGCGCC 1 cut(s) 1050
MlyI GAGTC 2 cut(s) 684, 1403
Mox20I TGGCCA 1 cut(s) 1425
Mph1103I ATGCAT 1 cut(s) 208
MreI CGCCGGCG 1 cut(s) 1046
MroI TCCGGA 1 cut(s) 58
MroNI GCCGGC 1 cut(s) 1046
MscI TGGCCA 1 cut(s) 1425
MseI TTAA 2 cut(s) 273, 1149
MslI CAYNNNNRTG 3 cut(s) 929, 968, 1035
Msp20I TGGCCA 1 cut(s) 1425
MspA1I CMGCKG 2 cut(s) 94, 896
MspI CCGG 6 cut(s) 44, 59, 131, 1047, 1071, 1170
MspR9I CCNGG 4 cut(s) 131, 132, 329, 1171
MvaI CCWGG 1 cut(s) 329
MvnI CGCG 2 cut(s) 86, 104
MwoI GCNNNNNNNGC 7 cut(s) 83, 194, 203, 305, 463, 758, 805
NaeI GCCGGC 1 cut(s) 1048
NarI GGCGCC 1 cut(s) 1050
NciI CCSGG 3 cut(s) 131, 132, 1171
NdeI CATATG 2 cut(s) 249, 1117
NdeII GATC 5 cut(s) 46, 570, 867, 1257, 1302
NgoMIV GCCGGC 1 cut(s) 1046
NlaIII CATG 7 cut(s) 196, 779, 868, 970, 1040, 1325, 1418
NlaIV GGNNCC 6 cut(s) 48, 421, 422, 515, 809, 1051
NsiI ATGCAT 1 cut(s) 208
NspI RCATGY 1 cut(s) 1418
NspV TTCGAA 1 cut(s) 629
PdiI GCCGGC 1 cut(s) 1048
PfeI GAWTC 2 cut(s) 648, 1062
PflMI CCANNNNNTGG 1 cut(s) 899
PfoI TCCNGGA 1 cut(s) 327
PinAI ACCGGT 1 cut(s) 1070
PkrI GCNGC 8 cut(s) 93, 103, 394, 607, 898, 922, 1318, 1420
PleI GAGTC 2 cut(s) 684, 1402
PluTI GGCGCC 1 cut(s) 1053
PpsI GAGTC 2 cut(s) 684, 1402
Psp6I CCWGG 1 cut(s) 327
PspFI CCCAGC 2 cut(s) 416, 892
PspGI CCWGG 1 cut(s) 327
PspN4I GGNNCC 6 cut(s) 48, 421, 422, 515, 809, 1051
PspOMI GGGCCC 1 cut(s) 420
PspPI GGNCC 3 cut(s) 420, 421, 620
PstNI CAGNNNCTG 1 cut(s) 899
PsuI RGATCY 1 cut(s) 46
PvuII CAGCTG 2 cut(s) 94, 896
RseI CAYNNNNRTG 3 cut(s) 929, 968, 1035
SaqAI TTAA 2 cut(s) 273, 1149
SatI GCNGC 8 cut(s) 92, 102, 393, 606, 897, 921, 1317, 1419
Sau3AI GATC 5 cut(s) 46, 570, 867, 1257, 1302
Sau96I GGNCC 3 cut(s) 420, 421, 620
SchI GAGTC 2 cut(s) 684, 1403
ScrFI CCNGG 4 cut(s) 131, 132, 329, 1171
SduI GDGCHC 3 cut(s) 138, 424, 518
SfaNI GCATC 4 cut(s) 444, 739, 894, 1279
SfoI GGCGCC 1 cut(s) 1051
SfuI TTCGAA 1 cut(s) 629
SgrAI CRCCGGYG 1 cut(s) 1046
SinI GGWCC 1 cut(s) 620
SmaI CCCGGG 1 cut(s) 132
SmiMI CAYNNNNRTG 3 cut(s) 929, 968, 1035
Sse9I AATT 8 cut(s) 181, 380, 396, 951, 1188, 1262, 1369, 1428
SsiI CCGC 3 cut(s) 102, 832, 1292
SspDI GGCGCC 1 cut(s) 1049
SspMI CTAG 2 cut(s) 30, 1374
StyD4I CCNGG 4 cut(s) 129, 130, 327, 1169
StyI CCWWGG 3 cut(s) 756, 956, 1054
TaaI ACNGT 3 cut(s) 152, 1125, 1145
TaiI ACGT 1 cut(s) 1215
TaqI TCGA 1 cut(s) 629
TaqII GACCGA 1 cut(s) 832
TasI AATT 8 cut(s) 181, 380, 396, 951, 1188, 1262, 1369, 1428
TauI GCSGC 1 cut(s) 104
TfiI GAWTC 2 cut(s) 648, 1062
Tru1I TTAA 2 cut(s) 273, 1149
Tru9I TTAA 2 cut(s) 273, 1149
TscAI CASTG 4 cut(s) 165, 748, 790, 877
TseI GCWGC 7 cut(s) 91, 392, 605, 896, 920, 1316, 1418
TspDTI ATGAA 6 cut(s) 83, 181, 452, 474, 1255, 1326
TspMI CCCGGG 1 cut(s) 130
TspRI CASTG 4 cut(s) 165, 748, 790, 877
Van91I CCANNNNNTGG 1 cut(s) 899
VpaK11BI GGWCC 1 cut(s) 620
XagI CCTNNNNNAGG 1 cut(s) 332
XapI RAATTY 3 cut(s) 181, 1188, 1369
XceI RCATGY 1 cut(s) 1418
XcmI CCANNNNNNNNNTGG 1 cut(s) 581
XmaI CCCGGG 1 cut(s) 130
XspI CTAG 2 cut(s) 30, 1374
Zsp2I ATGCAT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.