Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0008122

Physical Location & Seq

Genomic Coordinates Reverse (-)

39354866 .. 39360419

Gene Structure 5554 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G473800.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2880 bp

ATGGATTCACCTGAAATTAGAAAAATCAAAGCCAACACCACGTCTTCCTCAGATTCTCCTCCAGTTCAAGACTCACCAGTTTTCAGTTACATAAACAATCTATCACCAATACAGCCTGTGAAGGCTTCACATTTAGCACAAGGGTTCCCTGGACTTAACTCTCCTCCTCTTGTGTTCACGTCACCGCGTATAAATTCACACCGGAATACAAGTTTCCTAAAAAGGCCTCAATACCAACCATTATCCAGTGCAGAAAAGTCTAAAACACAGGATGAAGCCAAGAAATTCCTTGATGGTCCAGTTGATCCCAAAATTACGCAATTGCATATGAGATTGATTACTGATTCTCAGGACTGTGAGACTAAGATTCGTGTGGAATCTCAGCAATGCAGCTCCTCAGAGGGTGTGGATGAATACTTAGCTGATCCCTCGGAAGTAGACTGTGTAGACTCTACTCAATCAGCCAGTCCATGTTTGAAACAATCAAACAATGTGCCAGAAACATTCACTGGCTCAAAGGAAACTACTTTGTATGACAACAAACATAATACTGGAACAGACTTAGGGACAGAAGCTAAGGCACCATCAGAGCAGGCTAAAGAGGACCTTGAAGGAAAGCAAACATTTGATGCAAAGCCTGTGAAAATTATAGAGCAGAGTGATGGGGAGTTGCCATATGATGAATGCCCAAATATTGAATCTGGTTTATCCATCGATAATGCTTACAAGAGAGAATATCGCCAACATTTACATGATCAGTTACAGGATAGAGGAGGTAAACATCAGGATGATTGTGATCATACCCCTCAATCTCCTCCTGGACGTTTGCAGATTGTTCAGGTGTATGAAAATTCTGCTGAGAATGTTGGTGCAATATCCAAAGGAATGATTGGGAACATGATATTGCATGCTCCTAAGGCCAGAAGTGAACAAGGGGGCATGCATAGACGTTGCCTTCAGTTTGAAGAGGCTCCTCCTTGTGCCACTGGAAAAAGAGACTGTTCTTTGAGTTCTATACAGGAGGTTAACAATTCAGAACCACCTTCCAGCATGGGAGAATCAAAGTTGGTGAAATTATCTTATGCGGACTTAAAGTCAACTTCCAAGAGACAGATGGGCACCCCATTGCCACCTCGGTGTGGTGGAAACTCTCCTTCAACTGTTCCCAAGCCATCAGGTATTGGCTTGCATCTAAACAGCATAGTCAATGCTGCACCATTGGTTCGTGGTACAACAAGAAGCATAAAATTAGCAGATCACTACATTGGTGTGCAAGTTATGAAATCAGCATCTGTTATGAGCTCCCATTTACCAGATAATGTGAGGTGCCGTTCAATTTCGTTGAATATGGTTGAGAAAGACTCAGCTGGTCCTGAAGACAGGGATGAATCTGAGACTTCAATTGCTGCAAGTTCTGCCGTTCCCTCGTCTCCTCACACTGTGGTATTTGAGGGTCATGGTCCTACACATGAGAAGAGGGGATTTGATGCTGAGAATATTGACGATTATGAGGAGTGCAAGCAATCTAGTCCAAAAAAGAAAAGGAAAAAAACATCAAGCACTAAAGATAGTGATGGTACCAAACGTTGCAACTGTAAGAAGACCAAATGCTTGAAACTATATTGTGATTGTTTTGCTGCTGGAGTCTATTGTGCCGAATCTTGTGCTTGCCAAGGATGCTTCAATATAACCGATTATGAAGACACAGTTCTTGAGACAAGGCAACATATTGAATCTCGTAATCCACTTGCATTTGCTCCCAAGATTGTACAGCATGAAGAAGAAATTCAATTCACTCCATCCTCGGCAAGACACAAAAGAGGGTGCAATTGCAAAAAGTCAATGTGTCTTAAAAAATATTGTGAATGCTATCAGGCAAATGTTGGATGCTCCAGTGGATGCCGGTGTGATGGATGTAAAAATGTTTATGGCAGGAAGGGAGAGTATATTCCAATAGAGCATGGTGTGGGTAAAGACAACATTAGTGACAAAGCCGGGAAGGAAAGAATAGAGAGCACATTTCATGAGAAGCTGGAAATGGTGGCAACAAAGAAAGATATTTTGTCTACTGAGTTGTACGATTCTCACAACCTCACTCCATTGGCGCCATCATTTCAGTGCTCAGACCATGCAAATAATGTACCGAAATCCCCGTGCCTTCCTACAAGTTACCTTCCATCACCCGAATCTGATCTTACCATCATATCATCTTATGAAAAATCTACAAGATCCCCTCTAAGACATTCAGAGAGCAGTGACATTCTTCTGGAAACAAGTAAAGAATTATCAGATTTAGGTTCTTACAATTGGCGTGTGGATTATGATAACATTGGAATAGTGGACACTTTTTCACCAAGATGCGATGCAGCCCCCACTACATGCCATATTACTCCAATGTCCGATCTTTGCTCAATGGCCATGGCGTCTTCAACATCATCCAAAACAAGTGACTGGACAAATGCTTCACAAGTTCAGCTGTGCCCTGGAAGTCATGGTCTGTCATCCGATAGTTCTCTTCATAGGCGTAGTTCACCAGTCACCCCAATGACTCGGTTAGGTGGGACGAAATCTTTCCAAGGTCTTGACTTTGAAAATGGACTTTATGACATTCTGCAAGATGACACCCCTGAGATACTGAAGGACTCTTCTACTCCGATTAGGTCATTGAAAGTAAGTTCCCCCAATAAGAAGCGGGTTTCTCCTCCTCACAGCCACAATCACGAGCTTGGTGCAAGCTCTTCAGGAGCCTTGAGAAGTGGCCGCAAGTTCATATTGAAGGCTGTCCCTTCGTTCCCACCCCTTACCCCTTGTATTGGTTCCAAAGGCAGTAGTATCATTCAGAACATGAGTAATCTTCAAGACAAAGGTAGAAAGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

960

Amino Acids

104.97

Weight (kDa)

6.76

Isoelectric Point (pI)

65.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008122)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g29570 FvH4_2g29570 FvH4_2g29570
malus_domestica	MD08G1145800.v1.1 MD15G1121200.v1.1
prunus_persica	Prupe.1G473800_v2.0.a1 Prupe.1G473800_v2.0.a1 Prupe.1G473800_v2.0.a1
pyrus_communis	pycom08g12270 pycom15g10940
rosa_chinensis	RchiOBHm_Chr6g0298531
rosa_multiflora	Rmu_co8315197.1_g000001 Rmu_co8448729.1_g000001 Rmu_sc0004500.1_g000005 Rmu_ssc0000289.1_g000056
rosa_roxburghii	Rroxscaffold_7G00169560
rosa_rugosa	Rorug06G0281000 Rorug06G0281000
rosa_samantha	Rh6AG392300 Rh6BG400100 Rh6CG406000 Rh6DG392400 Rh6DG392500
rosa_wichuraiana	Rw6G034290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1577
AccB1I	GGYRCC	5 cut(s)	580, 1118, 1326, 1577, 2104
AccI	GTMKAC	3 cut(s)	438, 447, 2066
AccII	CGCG	1 cut(s)	187
AciI	CCGC	4 cut(s)	185, 1085, 2692, 2761
AclI	AACGTT	1 cut(s)	1585
AclWI	GGATC	3 cut(s)	299, 419, 2223
AcoI	YGGCCR	2 cut(s)	2415, 2758
AcsI	RAATTY	4 cut(s)	193, 284, 850, 1785
AcuI	CTGAAG	4 cut(s)	941, 1395, 2657, 2724
AcyI	GRCGYC	2 cut(s)	2105, 2423
AdeI	CACNNNGTG	1 cut(s)	1441
AfaI	GTAC	5 cut(s)	1231, 1579, 1770, 2078, 2142
AfiI	CCNNNNNNNGG	2 cut(s)	1139, 2813
AhdI	GACNNNNNGTC	1 cut(s)	1093
AjiI	CACGTC	2 cut(s)	42, 180
AjnI	CCWGG	3 cut(s)	148, 817, 2482
AleI	CACNNNNGTG	1 cut(s)	1135
AluBI	AGCT	9 cut(s)	393, 422, 575, 1302, 1367, 2032, 2476, 2725, 2736
AluI	AGCT	9 cut(s)	393, 422, 575, 1302, 1367, 2032, 2476, 2725, 2736
Alw21I	GWGCWC	3 cut(s)	1304, 2018, 2123
Alw26I	GTCTC	6 cut(s)	353, 990, 1102, 1388, 1434, 1709
AlwI	GGATC	3 cut(s)	299, 419, 2223
AlwNI	CAGNNNCTG	1 cut(s)	1292
AoxI	GGCC	4 cut(s)	224, 918, 2415, 2758
ApeKI	GCWGC	5 cut(s)	390, 1211, 1406, 1637, 2366
ApoI	RAATTY	4 cut(s)	193, 284, 850, 1785
Asp700I	GAANNNNTTC	2 cut(s)	1785, 2570
Asp718I	GGTACC	1 cut(s)	1577
AspLEI	GCGC	1 cut(s)	2107
AspS9I	GGNCC	4 cut(s)	296, 604, 1370, 1460
AsuC2I	CCSGG	1 cut(s)	1996
AsuHPI	GGTGA	8 cut(s)	66, 96, 174, 1081, 2172, 2343, 2523, 2530
AvaII	GGWCC	4 cut(s)	296, 604, 1370, 1460
AxyI	CCTNAGG	1 cut(s)	915
BaeGI	GKGCMC	2 cut(s)	1121, 2483
BalI	TGGCCA	1 cut(s)	2417
BanI	GGYRCC	5 cut(s)	580, 1118, 1326, 1577, 2104
BanII	GRGCYC	1 cut(s)	1304
BauI	CACGAG	1 cut(s)	2720
BbsI	GAAGAC	5 cut(s)	36, 1383, 1607, 1707, 2418
Bbv12I	GWGCWC	3 cut(s)	1304, 2018, 2123
BbvI	GCAGC	5 cut(s)	402, 1198, 1393, 1624, 2378
BceAI	ACGGC	2 cut(s)	1314, 1403
BcgI	CGANNNNNNTGC	4 cut(s)	1646, 1680, 2711, 2745
BciT130I	CCWGG	3 cut(s)	150, 819, 2484
BclI	TGATCA	2 cut(s)	754, 796
BcnI	CCSGG	1 cut(s)	1996
BcoDI	GTCTC	6 cut(s)	353, 990, 1102, 1388, 1434, 1709
BfaI	CTAG	1 cut(s)	1527
BfoI	RGCGCY	1 cut(s)	2108
BisI	GCNGC	6 cut(s)	391, 1212, 1407, 1638, 2367, 2761
BlsI	GCNGC	6 cut(s)	392, 1213, 1408, 1639, 2368, 2762
Bme1390I	CCNGG	4 cut(s)	150, 819, 1996, 2484
Bme18I	GGWCC	4 cut(s)	296, 604, 1370, 1460
BmeRI	GACNNNNNGTC	1 cut(s)	1093
BmgBI	CACGTC	2 cut(s)	42, 180
BmgT120I	GGNCC	4 cut(s)	296, 604, 1370, 1460
BmiI	GGNNCC	9 cut(s)	146, 582, 972, 1120, 1328, 1579, 2106, 2746, 2818
BmrFI	CCNGG	4 cut(s)	150, 819, 1996, 2484
BmsI	GCATC	9 cut(s)	619, 1198, 1298, 1477, 1667, 1877, 1889, 2348, 2353
BpiI	GAAGAC	5 cut(s)	36, 1383, 1607, 1707, 2418
BplI	GAGNNNNNCTC	2 cut(s)	1346, 1378
BpmI	CTGGAG	3 cut(s)	45, 1662, 1876
Bpu10I	CCTNAGC	1 cut(s)	576
BpuEI	CTTGAG	2 cut(s)	1733, 2770
BpuMI	CCSGG	1 cut(s)	1996
Bsa29I	ATCGAT	1 cut(s)	714
BsaBI	GATNNNNATC	1 cut(s)	795
BsaHI	GRCGYC	2 cut(s)	2105, 2423
BsaJI	CCNNGG	8 cut(s)	148, 429, 1133, 1672, 1803, 2418, 2482, 2575
BsaWI	WCCGGW	1 cut(s)	201
Bsc4I	CCNNNNNNNGG	2 cut(s)	1139, 2813
Bse118I	RCCGGY	1 cut(s)	1902
Bse21I	CCTNAGG	1 cut(s)	915
Bse3DI	GCAATG	2 cut(s)	392, 1124
Bse8I	GATNNNNATC	1 cut(s)	795
BseBI	CCWGG	3 cut(s)	150, 819, 2484
BseCI	ATCGAT	1 cut(s)	714
BseDI	CCNNGG	8 cut(s)	148, 429, 1133, 1672, 1803, 2418, 2482, 2575
BseJI	GATNNNNATC	1 cut(s)	795
BseLI	CCNNNNNNNGG	2 cut(s)	1139, 2813
BseMI	GCAATG	2 cut(s)	392, 1124
BseSI	GKGCMC	2 cut(s)	1121, 2483
BseXI	GCAGC	5 cut(s)	402, 1198, 1393, 1624, 2378
BsgI	GTGCAG	2 cut(s)	270, 1197
Bsh1236I	CGCG	1 cut(s)	187
BshFI	GGCC	4 cut(s)	226, 920, 2417, 2760
BshNI	GGYRCC	5 cut(s)	580, 1118, 1326, 1577, 2104
BshVI	ATCGAT	1 cut(s)	714
BsiHKAI	GWGCWC	3 cut(s)	1304, 2018, 2123
BsiSI	CCGG	3 cut(s)	202, 1903, 1995
BslFI	GGGAC	3 cut(s)	580, 2575, 2768
BslI	CCNNNNNNNGG	2 cut(s)	1139, 2813
BsmAI	GTCTC	6 cut(s)	353, 990, 1102, 1388, 1434, 1709
BsmBI	CGTCTC	1 cut(s)	1434
BsmFI	GGGAC	3 cut(s)	580, 2575, 2768
BsmI	GAATGC	2 cut(s)	689, 1871
BsnI	GGCC	4 cut(s)	226, 920, 2417, 2760
Bsp1286I	GDGCHC	5 cut(s)	1121, 1304, 2018, 2123, 2483
Bsp1407I	TGTACA	1 cut(s)	1768
Bsp143I	GATC	8 cut(s)	304, 424, 754, 796, 1255, 2191, 2228, 2401
Bsp19I	CCATGG	1 cut(s)	2418
BspACI	CCGC	4 cut(s)	185, 1085, 2692, 2761
BspANI	GGCC	4 cut(s)	226, 920, 2417, 2760
BspDI	ATCGAT	1 cut(s)	714
BspFNI	CGCG	1 cut(s)	187
BspHI	TCATGA	1 cut(s)	2023
BspLI	GGNNCC	9 cut(s)	146, 582, 972, 1120, 1328, 1579, 2106, 2746, 2818
BspPI	GGATC	3 cut(s)	299, 419, 2223
BspQI	GCTCTTC	1 cut(s)	2743
BspT107I	GGYRCC	5 cut(s)	580, 1118, 1326, 1577, 2104
BsrDI	GCAATG	2 cut(s)	392, 1124
BsrFI	RCCGGY	1 cut(s)	1902
BsrGI	TGTACA	1 cut(s)	1768
BssAI	RCCGGY	1 cut(s)	1902
BssECI	CCNNGG	8 cut(s)	148, 429, 1133, 1672, 1803, 2418, 2482, 2575
BssMI	GATC	8 cut(s)	304, 424, 754, 796, 1255, 2191, 2228, 2401
BssNI	GRCGYC	2 cut(s)	2105, 2423
BssSI	CACGAG	1 cut(s)	2720
BssT1I	CCWWGG	3 cut(s)	1672, 2418, 2575
Bst2BI	CACGAG	1 cut(s)	2720
Bst2UI	CCWGG	3 cut(s)	150, 819, 2484
Bst4CI	ACNGT	7 cut(s)	356, 443, 1001, 1162, 1441, 1595, 1708
Bst6I	CTCTTC	5 cut(s)	960, 1469, 2520, 2650, 2743
BstACI	GRCGYC	2 cut(s)	2105, 2423
BstAPI	GCANNNNNTGC	1 cut(s)	1415
BstAUI	TGTACA	1 cut(s)	1768
BstC8I	GCNNGC	7 cut(s)	594, 909, 941, 1187, 1520, 1669, 2734
BstDSI	CCRYGG	1 cut(s)	2418
BstFNI	CGCG	1 cut(s)	187
BstH2I	RGCGCY	1 cut(s)	2108
BstHHI	GCGC	1 cut(s)	2107
BstKTI	GATC	8 cut(s)	307, 427, 757, 799, 1258, 2194, 2231, 2404
BstMAI	GTCTC	6 cut(s)	353, 990, 1102, 1388, 1434, 1709
BstMBI	GATC	8 cut(s)	304, 424, 754, 796, 1255, 2191, 2228, 2401
BstMWI	GCNNNNNNNGC	3 cut(s)	917, 1415, 1677
BstNI	CCWGG	3 cut(s)	150, 819, 2484
BstNSI	RCATGY	3 cut(s)	911, 943, 2382
BstSCI	CCNGG	4 cut(s)	148, 817, 1994, 2482
BstSLI	GKGCMC	2 cut(s)	1121, 2483
BstUI	CGCG	1 cut(s)	187
BstV1I	GCAGC	5 cut(s)	402, 1198, 1393, 1624, 2378
BstV2I	GAAGAC	5 cut(s)	36, 1383, 1607, 1707, 2418
BstX2I	RGATCY	1 cut(s)	2228
BstYI	RGATCY	1 cut(s)	2228
Bsu15I	ATCGAT	1 cut(s)	714
Bsu36I	CCTNAGG	1 cut(s)	915
BsuRI	GGCC	4 cut(s)	226, 920, 2417, 2760
BsuTUI	ATCGAT	1 cut(s)	714
BtgI	CCRYGG	1 cut(s)	2418
BtgZI	GCGATG	1 cut(s)	2376
BtrI	CACGTC	2 cut(s)	42, 180
BtsI	GCAGTG	1 cut(s)	2260
BtsIMutI	CAGTG	7 cut(s)	253, 507, 984, 1437, 1900, 2123, 2260
Cac8I	GCNNGC	7 cut(s)	594, 909, 941, 1187, 1520, 1669, 2734
CaiI	CAGNNNCTG	1 cut(s)	1292
CciI	TCATGA	1 cut(s)	2023
CfoI	GCGC	1 cut(s)	2107
Cfr10I	RCCGGY	1 cut(s)	1902
Cfr13I	GGNCC	4 cut(s)	296, 604, 1370, 1460
ClaI	ATCGAT	1 cut(s)	714
CseI	GACGC	1 cut(s)	2412
Csp6I	GTAC	5 cut(s)	1230, 1578, 1769, 2077, 2141
CviQI	GTAC	5 cut(s)	1230, 1578, 1769, 2077, 2141
DinI	GGCGCC	1 cut(s)	2106
DpnI	GATC	8 cut(s)	306, 426, 756, 798, 1257, 2193, 2230, 2403
DpnII	GATC	8 cut(s)	304, 424, 754, 796, 1255, 2191, 2228, 2401
DraIII	CACNNNGTG	1 cut(s)	1441
DriI	GACNNNNNGTC	1 cut(s)	1093
EaeI	YGGCCR	2 cut(s)	2415, 2758
Eam1104I	CTCTTC	5 cut(s)	960, 1469, 2520, 2650, 2743
Eam1105I	GACNNNNNGTC	1 cut(s)	1093
EarI	CTCTTC	5 cut(s)	960, 1469, 2520, 2650, 2743
Ecl136II	GAGCTC	1 cut(s)	1302
Eco130I	CCWWGG	3 cut(s)	1672, 2418, 2575
Eco147I	AGGCCT	1 cut(s)	226
Eco24I	GRGCYC	1 cut(s)	1304
Eco47I	GGWCC	4 cut(s)	296, 604, 1370, 1460
Eco53kI	GAGCTC	1 cut(s)	1302
Eco57I	CTGAAG	4 cut(s)	941, 1395, 2657, 2724
Eco81I	CCTNAGG	1 cut(s)	915
EcoICRI	GAGCTC	1 cut(s)	1302
EcoO109I	RGGNCCY	1 cut(s)	604
EcoRII	CCWGG	3 cut(s)	148, 817, 2482
EcoT14I	CCWWGG	3 cut(s)	1672, 2418, 2575
EcoT22I	ATGCAT	1 cut(s)	945
EcoT38I	GRGCYC	1 cut(s)	1304
EgeI	GGCGCC	1 cut(s)	2106
EheI	GGCGCC	1 cut(s)	2106
ErhI	CCWWGG	3 cut(s)	1672, 2418, 2575
Esp3I	CGTCTC	1 cut(s)	1434
FalI	AAGNNNNNCTT	2 cut(s)	591, 623
FaqI	GGGAC	3 cut(s)	580, 2575, 2768
FauI	CCCGC	1 cut(s)	2685
FauNDI	CATATG	2 cut(s)	327, 676
FbaI	TGATCA	2 cut(s)	754, 796
FblI	GTMKAC	3 cut(s)	438, 447, 2066
Fnu4HI	GCNGC	6 cut(s)	391, 1212, 1407, 1638, 2367, 2761
FriOI	GRGCYC	1 cut(s)	1304
Fsp4HI	GCNGC	6 cut(s)	391, 1212, 1407, 1638, 2367, 2761
FspBI	CTAG	1 cut(s)	1527
GlaI	GCGC	1 cut(s)	2106
GluI	GCNGC	6 cut(s)	391, 1212, 1407, 1638, 2367, 2761
GsuI	CTGGAG	3 cut(s)	45, 1662, 1876
HaeII	RGCGCY	1 cut(s)	2108
HaeIII	GGCC	4 cut(s)	226, 920, 2417, 2760
HapII	CCGG	3 cut(s)	202, 1903, 1995
HgaI	GACGC	1 cut(s)	2412
HhaI	GCGC	1 cut(s)	2107
Hin1I	GRCGYC	2 cut(s)	2105, 2423
Hin6I	GCGC	1 cut(s)	2105
HinP1I	GCGC	1 cut(s)	2105
HincII	GTYRAC	2 cut(s)	1027, 1098
HindII	GTYRAC	2 cut(s)	1027, 1098
HpaI	GTTAAC	1 cut(s)	1027
HpaII	CCGG	3 cut(s)	202, 1903, 1995
HphI	GGTGA	8 cut(s)	66, 96, 174, 1081, 2172, 2343, 2523, 2530
HpyCH4III	ACNGT	7 cut(s)	356, 443, 1001, 1162, 1441, 1595, 1708
HpyCH4IV	ACGT	5 cut(s)	41, 179, 823, 949, 1585
HpyF10VI	GCNNNNNNNGC	3 cut(s)	917, 1415, 1677
HpySE526I	ACGT	5 cut(s)	41, 179, 823, 949, 1585
Hsp92I	GRCGYC	2 cut(s)	2105, 2423
HspAI	GCGC	1 cut(s)	2105
KasI	GGCGCC	1 cut(s)	2104
KpnI	GGTACC	1 cut(s)	1581
Ksp22I	TGATCA	2 cut(s)	754, 796
KspAI	GTTAAC	1 cut(s)	1027
Kzo9I	GATC	8 cut(s)	304, 424, 754, 796, 1255, 2191, 2228, 2401
LguI	GCTCTTC	1 cut(s)	2743
LmnI	GCTCC	7 cut(s)	398, 916, 976, 1307, 1762, 1895, 2744
Lsp1109I	GCAGC	5 cut(s)	402, 1198, 1393, 1624, 2378
LweI	GCATC	9 cut(s)	619, 1198, 1298, 1477, 1667, 1877, 1889, 2348, 2353
MaeI	CTAG	1 cut(s)	1527
MaeII	ACGT	5 cut(s)	41, 179, 823, 949, 1585
MaeIII	GTNAC	8 cut(s)	86, 180, 759, 1985, 2168, 2255, 2447, 2536
MalI	GATC	8 cut(s)	306, 426, 756, 798, 1257, 2193, 2230, 2403
MboI	GATC	8 cut(s)	304, 424, 754, 796, 1255, 2191, 2228, 2401
MfeI	CAATTG	4 cut(s)	320, 1401, 1828, 2305
MflI	RGATCY	1 cut(s)	2228
MhlI	GDGCHC	5 cut(s)	1121, 1304, 2018, 2123, 2483
MlsI	TGGCCA	1 cut(s)	2417
MluNI	TGGCCA	1 cut(s)	2417
Mly113I	GGCGCC	1 cut(s)	2105
MlyI	GAGTC	6 cut(s)	65, 443, 1355, 1653, 2542, 2636
MmeI	TCCRAC	1 cut(s)	1864
Mox20I	TGGCCA	1 cut(s)	2417
Mph1103I	ATGCAT	1 cut(s)	945
MroXI	GAANNNNTTC	2 cut(s)	1785, 2570
MscI	TGGCCA	1 cut(s)	2417
MseI	TTAA	4 cut(s)	156, 1026, 1091, 1851
MslI	CAYNNNNRTG	7 cut(s)	750, 786, 1135, 1268, 2116, 2356, 2543
Msp20I	TGGCCA	1 cut(s)	2417
MspA1I	CMGCKG	2 cut(s)	1367, 2476
MspI	CCGG	3 cut(s)	202, 1903, 1995
MspR9I	CCNGG	4 cut(s)	150, 819, 1996, 2484
MunI	CAATTG	4 cut(s)	320, 1401, 1828, 2305
Mva1269I	GAATGC	2 cut(s)	689, 1871
MvaI	CCWGG	3 cut(s)	150, 819, 2484
MvnI	CGCG	1 cut(s)	187
MwoI	GCNNNNNNNGC	3 cut(s)	917, 1415, 1677
NarI	GGCGCC	1 cut(s)	2105
NciI	CCSGG	1 cut(s)	1996
NcoI	CCATGG	1 cut(s)	2418
NdeI	CATATG	2 cut(s)	327, 676
NdeII	GATC	8 cut(s)	304, 424, 754, 796, 1255, 2191, 2228, 2401
NlaIV	GGNNCC	9 cut(s)	146, 582, 972, 1120, 1328, 1579, 2106, 2746, 2818
NmeAIII	GCCGAG	1 cut(s)	1784
NmuCI	GTSAC	5 cut(s)	180, 1985, 2255, 2447, 2536
NsiI	ATGCAT	1 cut(s)	945
NspI	RCATGY	3 cut(s)	911, 943, 2382
OliI	CACNNNNGTG	1 cut(s)	1135
PaeI	GCATGC	2 cut(s)	911, 943
PagI	TCATGA	1 cut(s)	2023
PceI	AGGCCT	1 cut(s)	226
PciSI	GCTCTTC	1 cut(s)	2743
PctI	GAATGC	2 cut(s)	689, 1871
PdmI	GAANNNNTTC	2 cut(s)	1785, 2570
PfoI	TCCNGGA	1 cut(s)	817
PkrI	GCNGC	6 cut(s)	392, 1213, 1408, 1639, 2368, 2762
PleI	GAGTC	6 cut(s)	65, 443, 1355, 1652, 2542, 2636
PluTI	GGCGCC	1 cut(s)	2108
PpsI	GAGTC	6 cut(s)	65, 443, 1355, 1652, 2542, 2636
PpuMI	RGGWCCY	1 cut(s)	604
Psp124BI	GAGCTC	1 cut(s)	1304
Psp1406I	AACGTT	1 cut(s)	1585
Psp5II	RGGWCCY	1 cut(s)	604
Psp6I	CCWGG	3 cut(s)	148, 817, 2482
PspGI	CCWGG	3 cut(s)	148, 817, 2482
PspN4I	GGNNCC	9 cut(s)	146, 582, 972, 1120, 1328, 1579, 2106, 2746, 2818
PspPI	GGNCC	4 cut(s)	296, 604, 1370, 1460
PspPPI	RGGWCCY	1 cut(s)	604
PstNI	CAGNNNCTG	1 cut(s)	1292
PsuI	RGATCY	1 cut(s)	2228
PvuII	CAGCTG	2 cut(s)	1367, 2476
RsaI	GTAC	5 cut(s)	1231, 1579, 1770, 2078, 2142
RsaNI	GTAC	5 cut(s)	1230, 1578, 1769, 2077, 2141
RseI	CAYNNNNRTG	7 cut(s)	750, 786, 1135, 1268, 2116, 2356, 2543
SacI	GAGCTC	1 cut(s)	1304
SapI	GCTCTTC	1 cut(s)	2743
SaqAI	TTAA	4 cut(s)	156, 1026, 1091, 1851
SatI	GCNGC	6 cut(s)	391, 1212, 1407, 1638, 2367, 2761
Sau3AI	GATC	8 cut(s)	304, 424, 754, 796, 1255, 2191, 2228, 2401
Sau96I	GGNCC	4 cut(s)	296, 604, 1370, 1460
SchI	GAGTC	6 cut(s)	65, 443, 1355, 1653, 2542, 2636
ScrFI	CCNGG	4 cut(s)	150, 819, 1996, 2484
SduI	GDGCHC	5 cut(s)	1121, 1304, 2018, 2123, 2483
SfaNI	GCATC	9 cut(s)	619, 1198, 1298, 1477, 1667, 1877, 1889, 2348, 2353
SfoI	GGCGCC	1 cut(s)	2106
SinI	GGWCC	4 cut(s)	296, 604, 1370, 1460
SmiMI	CAYNNNNRTG	7 cut(s)	750, 786, 1135, 1268, 2116, 2356, 2543
SmlI	CTYRAG	2 cut(s)	1712, 2749
SmoI	CTYRAG	2 cut(s)	1712, 2749
SphI	GCATGC	2 cut(s)	911, 943
SseBI	AGGCCT	1 cut(s)	226
SsiI	CCGC	4 cut(s)	185, 1085, 2692, 2761
SspDI	GGCGCC	1 cut(s)	2104
SspI	AATATT	3 cut(s)	694, 1498, 1859
SspMI	CTAG	1 cut(s)	1527
SstI	GAGCTC	1 cut(s)	1304
StuI	AGGCCT	1 cut(s)	226
StyD4I	CCNGG	4 cut(s)	148, 817, 1994, 2482
StyI	CCWWGG	3 cut(s)	1672, 2418, 2575
TaaI	ACNGT	7 cut(s)	356, 443, 1001, 1162, 1441, 1595, 1708
TaiI	ACGT	5 cut(s)	44, 182, 826, 952, 1588
TaqI	TCGA	1 cut(s)	714
TatI	WGTACW	1 cut(s)	1768
TauI	GCSGC	1 cut(s)	2763
Tru1I	TTAA	4 cut(s)	156, 1026, 1091, 1851
Tru9I	TTAA	4 cut(s)	156, 1026, 1091, 1851
TscAI	CASTG	7 cut(s)	253, 514, 991, 1444, 1900, 2123, 2260
TseFI	GTSAC	5 cut(s)	180, 1985, 2255, 2447, 2536
TseI	GCWGC	5 cut(s)	390, 1211, 1406, 1637, 2366
Tsp45I	GTSAC	5 cut(s)	180, 1985, 2255, 2447, 2536
TspRI	CASTG	7 cut(s)	253, 514, 991, 1444, 1900, 2123, 2260
VpaK11BI	GGWCC	4 cut(s)	296, 604, 1370, 1460
XapI	RAATTY	4 cut(s)	193, 284, 850, 1785
XceI	RCATGY	3 cut(s)	911, 943, 2382
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1111
XmiI	GTMKAC	3 cut(s)	438, 447, 2066
XmnI	GAANNNNTTC	2 cut(s)	1785, 2570
XspI	CTAG	1 cut(s)	1527
Zsp2I	ATGCAT	1 cut(s)	945

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.