Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004500.1

Orthogroup ID

OG0008122

Physical Location & Seq

Genomic Coordinates Forward (+)

22649 .. 29761

Gene Structure 7113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004500.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3012 bp

atggcggcgtactcgcccatggcggagaccaacttagaccgatgcagggcccaggtggtggctagggaggagatgggctggaacttaagggagagggacaagagccttcaccggagagccgaaacgtggttgaggccggagccctgggagacgggtagggcgccctgtcggttagggtttcacaccatcatggattctcctgatttcaccaaagccacagcctcaccctcatccgactctcctccagttcaagagtcgcctgtttttagttttatcaacaatctgtccccaataaagactgtgaaggctacacatgtagcaccagcgttccccggacttagctctcctcctcttgtgtttacatcaccccgagtaaatccatacgctgagacgagtttcctaaagaggcggtctcaacacccagaattatccggtgcaggaatacctaaaactcatgatgaaggcaagaagtttgctgatagtgcaggggaccatgtgaaatctttgacacaattgcagttgggcttgattactgacactagagactgcaagaccaaaaattttgtggaaactcatccctgtagctcctcagggtttgtagatgaatacttggctgattccactgaggtggactgtgtgaattctgatcaatcagtcaatccacatttggaacattctagcagtgtgctggagccatcaagaagtggcttaatcaagtccaaggaactcacattaacacttggcaacaaaaatgataatgcaaccaactcaagaacggaagctcaggcaccttttatgacatcggagcaggctcacgagtacaatcaaggaaagcaaacatttattgcaaagttgacaaggagtgaaaagcaaaggaatgatgaattacgatttaacgaatgcacaaatatcgaatctgctttatctgttgacaatgctttcaggagagaatatcaccaagaatttcttgatcggggtctaagaggtgaacatcagaatgattatgattactgccctcaatctctagctggagctttgcataatggtcaggtgtatgaagatgagaatgctggttcaattccaaatagacgaattgaaaacgctgtaatgcatgcttctaagagacgttgccttcggtttgaagaggctcctccttgtactagtggcaaaggggacggttctttgagtctttcagagaaggttagcaattcagaaccacctaccagcactgtagaaacagagatggtggaatcaccttatgtggacttaataacttctacgaagacacagacggcagcctcattgccacctcggagtactggaaaatctcgtttaactgtttctaagccatccggtattggcttgcatttaaacagtattgtcaatgctgcatcagtggttcgtggtgcaacaagcataaaattagcagaccgctacatgggtgtgcaagttatgaactcagcatctattaatgtaaggcgctgtcctaattcattgaatgtggttgagaaagattctgctggtggtgtagactggaggaatgaaactgagacttcagttgctgcaagttctgccactacccagtctccccactctgtggaatttgagcatcatgggcctatacatgagattaggatatctgattctcacagtatagacagttatgaagagtgcaaccaatctagcccaaacacgaagaggaaaagagcattgagaaatattgatagtgatgggtgtaagcgctgcaactgcaggaagaccaaatgcttgaaactttattgtgattgtttttctgctggaatctattgtgacacaacttgtgcttgccaagagtgctttaacagacccgagtatgaagatacggttcttgagacaagacaaaaaatagaatcccgtaaccctcttgcatttgctcccaaggttgtagagcgtgaagatgagaatcaattcacaccagcctcggcaagacataaaagagggtgcaattgcaaaaagtcaatgtgtctgaaaaaatattgtgaatgttatcaggctaatgtaggatgctccaatggatgccggtgtgaaggatgtcaaaatgcttatggcaagaggggagagtttgttgacgtggattctagtgtgtccgaagaagtgattactgacaaagatggcacagaaataagagaaagcacatttgatgagaagctgcaaatggtggcaacaaggaaagattcaaatgattcacccagcctcactccgttgacaccatcattgcaatgctttgatgatgcacataatgtatcaaaatccagggtccttccggcaatatgccgtccatctcctcaatcagctcttaccatcatatcacatcacaaaaattcaacaagatctcctcagagaaattcagagaacagtgacaatcttatggacacaagtaaaggattgttggacgtgggttcttatgattggcgagaggattacgagaacattggtttggagactacttcaccaagatgctatgcagtccccacgacatgccatcttactccactgtctggtcctgggtcattggccataacttcttcggcatcattgacaacaagggatttgacaaatgcttcacaagttcagctgcgccctggaagtcactgtctcttgtcaggtagttctcttcattggcgtagttcaccagtcaccccaatgcatcggttcggtgggatgaaatcatttcaaggtattgactctgaaaagggccatcacgacttcctgcaagatgatacacctgagatattgaaggacacttctatccccatcaagtcggtgaaagtgagctccccaaataagaagcgtgtttctcctcctcacagccacaatcatgagcttggtacaagcttttcagggggcttgagaagtggccgcaagttcattctgaaggctgtgccttcttttccacctcttaccccttgtattggttcaaaaggtagtagtaccattcagaacatgaataatcctcttcaagataagggttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04218 map04218

Pfam Domains

Protein Families

TCR

Protein Analysis

1003

Amino Acids

110.56

Weight (kDa)

6.91

Isoelectric Point (pI)

57.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008122)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g29570 FvH4_2g29570 FvH4_2g29570
malus_domestica	MD08G1145800.v1.1 MD15G1121200.v1.1
prunus_persica	Prupe.1G473800_v2.0.a1 Prupe.1G473800_v2.0.a1 Prupe.1G473800_v2.0.a1
pyrus_communis	pycom08g12270 pycom15g10940
rosa_chinensis	RchiOBHm_Chr6g0298531
rosa_multiflora	Rmu_co8315197.1_g000001 Rmu_co8448729.1_g000001 Rmu_sc0004500.1_g000005 Rmu_ssc0000289.1_g000056
rosa_roxburghii	Rroxscaffold_7G00169560
rosa_rugosa	Rorug06G0281000 Rorug06G0281000
rosa_samantha	Rh6AG392300 Rh6BG400100 Rh6CG406000 Rh6DG392400 Rh6DG392500
rosa_wichuraiana	Rw6G034290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	160, 787
AccB7I	CCANNNNNTGG	3 cut(s)	58, 1597, 2537
AccI	GTMKAC	1 cut(s)	1530
AciI	CCGC	5 cut(s)	5, 23, 409, 1432, 2899
AcoI	YGGCCR	2 cut(s)	2553, 2896
AcsI	RAATTY	6 cut(s)	559, 640, 962, 1601, 2359, 2383
AcuI	CTGAAG	2 cut(s)	1539, 2933
AcyI	GRCGYC	1 cut(s)	161
AdeI	CACNNNGTG	1 cut(s)	1597
AfaI	GTAC	6 cut(s)	11, 821, 1159, 1318, 2869, 2971
AfeI	AGCGCT	1 cut(s)	1742
AfiI	CCNNNNNNNGG	7 cut(s)	46, 58, 126, 1438, 1597, 2537, 2951
AflII	CTTAAG	1 cut(s)	85
AflIII	ACRYGT	1 cut(s)	313
AhlI	ACTAGT	1 cut(s)	1160
AjiI	CACGTC	2 cut(s)	2110, 2434
AjnI	CCWGG	5 cut(s)	51, 143, 2291, 2542, 2620
AjuI	GAANNNNNNNTTGG	2 cut(s)	2459, 2491
AleI	CACNNNNGTG	1 cut(s)	626
Alw21I	GWGCWC	1 cut(s)	2816
AlwNI	CAGNNNCTG	1 cut(s)	1562
Ama87I	CYCGRG	2 cut(s)	369, 1847
Aor51HI	AGCGCT	1 cut(s)	1742
AoxI	GGCC	6 cut(s)	48, 134, 1616, 2553, 2734, 2896
ApaI	GGGCCC	1 cut(s)	52
ApeKI	GCWGC	6 cut(s)	1295, 1388, 1562, 1743, 2188, 2614
ApoI	RAATTY	6 cut(s)	559, 640, 962, 1601, 2359, 2383
ArsI	GACNNNNNNTTYG	2 cut(s)	1116, 1148
AseI	ATTAAT	1 cut(s)	1470
Asp700I	GAANNNNTTC	1 cut(s)	1946
AspLEI	GCGC	4 cut(s)	163, 1482, 1743, 2619
AspS9I	GGNCC	7 cut(s)	48, 49, 490, 1616, 2296, 2540, 2734
AsuC2I	CCSGG	1 cut(s)	333
AvaI	CYCGRG	2 cut(s)	369, 1847
AvaII	GGWCC	3 cut(s)	490, 2296, 2540
AxyI	CCTNAGG	1 cut(s)	589
BaeGI	GKGCMC	1 cut(s)	52
BalI	TGGCCA	1 cut(s)	2555
BanI	GGYRCC	2 cut(s)	160, 787
BanII	GRGCYC	3 cut(s)	52, 144, 2816
BauI	CACGAG	1 cut(s)	815
BbsI	GAAGAC	2 cut(s)	1289, 1763
Bbv12I	GWGCWC	1 cut(s)	2816
BbvI	GCAGC	6 cut(s)	1307, 1375, 1549, 1730, 2175, 2601
BceAI	ACGGC	2 cut(s)	1308, 2298
BcgI	CGANNNNNNTGC	2 cut(s)	892, 926
BciT130I	CCWGG	5 cut(s)	53, 145, 2293, 2544, 2622
BclI	TGATCA	1 cut(s)	646
BcnI	CCSGG	1 cut(s)	333
BcuI	ACTAGT	1 cut(s)	1160
BfaI	CTAG	7 cut(s)	63, 540, 678, 1025, 1161, 1683, 2118
BfmI	CTRYAG	3 cut(s)	580, 1230, 1750
BfoI	RGCGCY	3 cut(s)	164, 1483, 1744
BfrI	CTTAAG	1 cut(s)	85
BglII	AGATCT	1 cut(s)	2369
BisI	GCNGC	8 cut(s)	6, 1296, 1389, 1563, 1744, 2189, 2615, 2899
BlsI	GCNGC	8 cut(s)	7, 1297, 1390, 1564, 1745, 2190, 2616, 2900
BmcAI	AGTACT	1 cut(s)	1318
Bme1390I	CCNGG	6 cut(s)	53, 145, 333, 2293, 2544, 2622
Bme18I	GGWCC	3 cut(s)	490, 2296, 2540
BmeT110I	CYCGRG	2 cut(s)	369, 1847
BmgBI	CACGTC	2 cut(s)	2110, 2434
BmgT120I	GGNCC	7 cut(s)	48, 49, 490, 1616, 2296, 2540, 2734
BmiI	GGNNCC	8 cut(s)	50, 141, 162, 491, 693, 789, 1149, 2297
BmrFI	CCNGG	6 cut(s)	53, 145, 333, 2293, 2544, 2622
BmrI	ACTGGG	1 cut(s)	1576
BmuI	ACTGGG	1 cut(s)	1576
BpiI	GAAGAC	2 cut(s)	1289, 1763
BplI	GAGNNNNNCTC	2 cut(s)	397, 429
BpmI	CTGGAG	4 cut(s)	228, 710, 1050, 1555
Bpu10I	CCTNAGC	1 cut(s)	783
BpuEI	CTTGAG	3 cut(s)	754, 1889, 2908
BpuMI	CCSGG	1 cut(s)	333
BsaBI	GATNNNNATC	1 cut(s)	1941
BsaHI	GRCGYC	1 cut(s)	161
BsaI	GGTCTC	2 cut(s)	20, 417
BsaWI	WCCGGW	3 cut(s)	111, 431, 1352
BsaXI	ACNNNNNCTCC	6 cut(s)	1570, 1600, 2088, 2118, 2356, 2386
Bsc4I	CCNNNNNNNGG	7 cut(s)	46, 58, 126, 1438, 1597, 2537, 2951
Bse118I	RCCGGY	1 cut(s)	2058
Bse1I	ACTGG	5 cut(s)	245, 1324, 1538, 1582, 2672
Bse21I	CCTNAGG	1 cut(s)	589
Bse3DI	GCAATG	3 cut(s)	1301, 2252, 2264
Bse8I	GATNNNNATC	1 cut(s)	1941
BseBI	CCWGG	5 cut(s)	53, 145, 2293, 2544, 2622
BseGI	GGATG	7 cut(s)	230, 574, 1349, 2048, 2060, 2075, 2706
BseJI	GATNNNNATC	1 cut(s)	1941
BseLI	CCNNNNNNNGG	7 cut(s)	46, 58, 126, 1438, 1597, 2537, 2951
BseMI	GCAATG	3 cut(s)	1301, 2252, 2264
BseMII	CTCAG	8 cut(s)	378, 603, 615, 797, 1473, 1539, 2390, 2757
BseNI	ACTGG	5 cut(s)	245, 1324, 1538, 1582, 2672
BseSI	GKGCMC	1 cut(s)	52
BseXI	GCAGC	6 cut(s)	1307, 1375, 1549, 1730, 2175, 2601
BseYI	CCCAGC	1 cut(s)	2228
BsgI	GTGCAG	2 cut(s)	456, 504
BshFI	GGCC	6 cut(s)	50, 136, 1618, 2555, 2736, 2898
BshNI	GGYRCC	2 cut(s)	160, 787
BsiHKAI	GWGCWC	1 cut(s)	2816
BsiHKCI	CYCGRG	2 cut(s)	369, 1847
BsiSI	CCGG	7 cut(s)	112, 137, 333, 432, 1353, 2059, 2303
BslFI	GGGAC	5 cut(s)	110, 271, 503, 1187, 2492
BslI	CCNNNNNNNGG	7 cut(s)	46, 58, 126, 1438, 1597, 2537, 2951
BsmBI	CGTCTC	3 cut(s)	143, 383, 1117
BsmFI	GGGAC	5 cut(s)	110, 271, 503, 1187, 2492
BsmI	GAATGC	2 cut(s)	905, 1072
BsnI	GGCC	6 cut(s)	50, 136, 1618, 2555, 2736, 2898
Bso31I	GGTCTC	2 cut(s)	20, 417
BsoBI	CYCGRG	2 cut(s)	369, 1847
Bsp120I	GGGCCC	1 cut(s)	48
Bsp1286I	GDGCHC	3 cut(s)	52, 144, 2816
Bsp143I	GATC	3 cut(s)	646, 970, 2369
Bsp19I	CCATGG	1 cut(s)	18
BspACI	CCGC	5 cut(s)	5, 23, 409, 1432, 2899
BspANI	GGCC	6 cut(s)	50, 136, 1618, 2555, 2736, 2898
BspCNI	CTCAG	8 cut(s)	379, 602, 616, 796, 1472, 1540, 2389, 2758
BspHI	TCATGA	2 cut(s)	454, 2857
BspLI	GGNNCC	8 cut(s)	50, 141, 162, 491, 693, 789, 1149, 2297
BspMAI	CTGCAG	1 cut(s)	1754
BspT107I	GGYRCC	2 cut(s)	160, 787
BspTI	CTTAAG	1 cut(s)	85
BspTNI	GGTCTC	2 cut(s)	20, 417
BsrDI	GCAATG	3 cut(s)	1301, 2252, 2264
BsrFI	RCCGGY	1 cut(s)	2058
BsrI	ACTGG	5 cut(s)	245, 1324, 1538, 1582, 2672
BssAI	RCCGGY	1 cut(s)	2058
BssMI	GATC	3 cut(s)	646, 970, 2369
BssNI	GRCGYC	1 cut(s)	161
BssSI	CACGAG	1 cut(s)	815
BssT1I	CCWWGG	3 cut(s)	18, 720, 1917
Bst2BI	CACGAG	1 cut(s)	815
Bst2UI	CCWGG	5 cut(s)	53, 145, 2293, 2544, 2622
Bst6I	CTCTTC	5 cut(s)	1137, 1662, 1691, 2658, 3000
BstACI	GRCGYC	1 cut(s)	161
BstAFI	CTTAAG	1 cut(s)	85
BstAPI	GCANNNNNTGC	1 cut(s)	1571
BstC8I	GCNNGC	4 cut(s)	810, 1113, 1364, 1825
BstDSI	CCRYGG	1 cut(s)	18
BstF5I	GGATG	7 cut(s)	230, 574, 1349, 2048, 2060, 2075, 2706
BstH2I	RGCGCY	3 cut(s)	164, 1483, 1744
BstHHI	GCGC	4 cut(s)	163, 1482, 1743, 2619
BstKTI	GATC	3 cut(s)	649, 973, 2372
BstMBI	GATC	3 cut(s)	646, 970, 2369
BstMWI	GCNNNNNNNGC	5 cut(s)	482, 1571, 1615, 1749, 1833
BstNI	CCWGG	5 cut(s)	53, 145, 2293, 2544, 2622
BstNSI	RCATGY	3 cut(s)	317, 1115, 2520
BstSCI	CCNGG	6 cut(s)	51, 143, 331, 2291, 2542, 2620
BstSFI	CTRYAG	3 cut(s)	580, 1230, 1750
BstSLI	GKGCMC	1 cut(s)	52
BstV1I	GCAGC	6 cut(s)	1307, 1375, 1549, 1730, 2175, 2601
BstV2I	GAAGAC	2 cut(s)	1289, 1763
BstX2I	RGATCY	1 cut(s)	2369
BstXI	CCANNNNNNTGG	1 cut(s)	628
BstYI	RGATCY	1 cut(s)	2369
Bsu36I	CCTNAGG	1 cut(s)	589
BsuRI	GGCC	6 cut(s)	50, 136, 1618, 2555, 2736, 2898
BtgI	CCRYGG	1 cut(s)	18
BtrI	CACGTC	2 cut(s)	2110, 2434
BtsCI	GGATG	7 cut(s)	230, 574, 1349, 2048, 2060, 2075, 2706
BtsI	GCAGTG	1 cut(s)	688
BtsIMutI	CAGTG	7 cut(s)	621, 688, 1227, 1401, 2401, 2531, 2629
Cac8I	GCNNGC	4 cut(s)	810, 1113, 1364, 1825
CaiI	CAGNNNCTG	1 cut(s)	1562
CciI	TCATGA	2 cut(s)	454, 2857
CfoI	GCGC	4 cut(s)	163, 1482, 1743, 2619
Cfr10I	RCCGGY	1 cut(s)	2058
Cfr13I	GGNCC	7 cut(s)	48, 49, 490, 1616, 2296, 2540, 2734
Csp6I	GTAC	6 cut(s)	10, 820, 1158, 1317, 2868, 2970
CviQI	GTAC	6 cut(s)	10, 820, 1158, 1317, 2868, 2970
DinI	GGCGCC	1 cut(s)	162
DpnI	GATC	3 cut(s)	648, 972, 2371
DpnII	GATC	3 cut(s)	646, 970, 2369
DraI	TTTAAA	1 cut(s)	1371
DraIII	CACNNNGTG	1 cut(s)	1597
EaeI	YGGCCR	2 cut(s)	2553, 2896
Eam1104I	CTCTTC	5 cut(s)	1137, 1662, 1691, 2658, 3000
EarI	CTCTTC	5 cut(s)	1137, 1662, 1691, 2658, 3000
EciI	GGCGGA	1 cut(s)	38
Ecl136II	GAGCTC	1 cut(s)	2814
Eco130I	CCWWGG	3 cut(s)	18, 720, 1917
Eco24I	GRGCYC	3 cut(s)	52, 144, 2816
Eco31I	GGTCTC	2 cut(s)	20, 417
Eco32I	GATATC	1 cut(s)	1638
Eco47I	GGWCC	3 cut(s)	490, 2296, 2540
Eco47III	AGCGCT	1 cut(s)	1742
Eco53kI	GAGCTC	1 cut(s)	2814
Eco57I	CTGAAG	2 cut(s)	1539, 2933
Eco81I	CCTNAGG	1 cut(s)	589
Eco88I	CYCGRG	2 cut(s)	369, 1847
EcoICRI	GAGCTC	1 cut(s)	2814
EcoO109I	RGGNCCY	2 cut(s)	48, 2296
EcoRI	GAATTC	1 cut(s)	640
EcoRII	CCWGG	5 cut(s)	51, 143, 2291, 2542, 2620
EcoRV	GATATC	1 cut(s)	1638
EcoT14I	CCWWGG	3 cut(s)	18, 720, 1917
EcoT22I	ATGCAT	2 cut(s)	1113, 2688
EcoT38I	GRGCYC	3 cut(s)	52, 144, 2816
EgeI	GGCGCC	1 cut(s)	162
EheI	GGCGCC	1 cut(s)	162
ErhI	CCWWGG	3 cut(s)	18, 720, 1917
Esp3I	CGTCTC	3 cut(s)	143, 383, 1117
FalI	AAGNNNNNCTT	2 cut(s)	951, 983
FaqI	GGGAC	5 cut(s)	110, 271, 503, 1187, 2492
FbaI	TGATCA	1 cut(s)	646
FblI	GTMKAC	1 cut(s)	1530
Fnu4HI	GCNGC	8 cut(s)	6, 1296, 1389, 1563, 1744, 2189, 2615, 2899
FokI	GGATG	7 cut(s)	217, 561, 1336, 2055, 2067, 2082, 2713
FriOI	GRGCYC	3 cut(s)	52, 144, 2816
Fsp4HI	GCNGC	8 cut(s)	6, 1296, 1389, 1563, 1744, 2189, 2615, 2899
FspBI	CTAG	7 cut(s)	63, 540, 678, 1025, 1161, 1683, 2118
GlaI	GCGC	4 cut(s)	162, 1481, 1742, 2618
GluI	GCNGC	8 cut(s)	6, 1296, 1389, 1563, 1744, 2189, 2615, 2899
GsaI	CCCAGC	1 cut(s)	2232
GsuI	CTGGAG	4 cut(s)	228, 710, 1050, 1555
HaeII	RGCGCY	3 cut(s)	164, 1483, 1744
HaeIII	GGCC	6 cut(s)	50, 136, 1618, 2555, 2736, 2898
HapII	CCGG	7 cut(s)	112, 137, 333, 432, 1353, 2059, 2303
HhaI	GCGC	4 cut(s)	163, 1482, 1743, 2619
Hin1I	GRCGYC	1 cut(s)	161
Hin6I	GCGC	4 cut(s)	161, 1480, 1741, 2617
HinP1I	GCGC	4 cut(s)	161, 1480, 1741, 2617
HincII	GTYRAC	4 cut(s)	855, 931, 2107, 2244
HindII	GTYRAC	4 cut(s)	855, 931, 2107, 2244
HindIII	AAGCTT	1 cut(s)	2872
HpaII	CCGG	7 cut(s)	112, 137, 333, 432, 1353, 2059, 2303
HpyCH4IV	ACGT	4 cut(s)	125, 1126, 2109, 2433
HpyF10VI	GCNNNNNNNGC	5 cut(s)	482, 1571, 1615, 1749, 1833
HpySE526I	ACGT	4 cut(s)	125, 1126, 2109, 2433
Hsp92I	GRCGYC	1 cut(s)	161
HspAI	GCGC	4 cut(s)	161, 1480, 1741, 2617
KasI	GGCGCC	1 cut(s)	160
Ksp22I	TGATCA	1 cut(s)	646
Kzo9I	GATC	3 cut(s)	646, 970, 2369
LmnI	GCTCC	9 cut(s)	139, 590, 691, 805, 1031, 1153, 1918, 2051, 2819
Lsp1109I	GCAGC	6 cut(s)	1307, 1375, 1549, 1730, 2175, 2601
MaeI	CTAG	7 cut(s)	63, 540, 678, 1025, 1161, 1683, 2118
MaeII	ACGT	4 cut(s)	125, 1126, 2109, 2433
MaeIII	GTNAC	5 cut(s)	1808, 1895, 2396, 2627, 2674
MalI	GATC	3 cut(s)	648, 972, 2371
MboI	GATC	3 cut(s)	646, 970, 2369
MfeI	CAATTG	2 cut(s)	512, 1984
MflI	RGATCY	1 cut(s)	2369
MhlI	GDGCHC	3 cut(s)	52, 144, 2816
MlsI	TGGCCA	1 cut(s)	2555
MluNI	TGGCCA	1 cut(s)	2555
Mly113I	GGCGCC	1 cut(s)	161
MlyI	GAGTC	4 cut(s)	230, 263, 1195, 2717
MmeI	TCCRAC	2 cut(s)	258, 2409
Mox20I	TGGCCA	1 cut(s)	2555
Mph1103I	ATGCAT	2 cut(s)	1113, 2688
MroXI	GAANNNNTTC	1 cut(s)	1946
MscI	TGGCCA	1 cut(s)	2555
MseI	TTAA	9 cut(s)	86, 710, 734, 894, 1268, 1334, 1370, 1470, 1839
MslI	CAYNNNNRTG	8 cut(s)	188, 626, 996, 1442, 2257, 2494, 2681, 2856
Msp20I	TGGCCA	1 cut(s)	2555
MspA1I	CMGCKG	1 cut(s)	2614
MspCI	CTTAAG	1 cut(s)	85
MspI	CCGG	7 cut(s)	112, 137, 333, 432, 1353, 2059, 2303
MspR9I	CCNGG	6 cut(s)	53, 145, 333, 2293, 2544, 2622
MunI	CAATTG	2 cut(s)	512, 1984
Mva1269I	GAATGC	2 cut(s)	905, 1072
MvaI	CCWGG	5 cut(s)	53, 145, 2293, 2544, 2622
MwoI	GCNNNNNNNGC	5 cut(s)	482, 1571, 1615, 1749, 1833
NarI	GGCGCC	1 cut(s)	161
NciI	CCSGG	1 cut(s)	333
NcoI	CCATGG	1 cut(s)	18
NdeII	GATC	3 cut(s)	646, 970, 2369
NlaIV	GGNNCC	8 cut(s)	50, 141, 162, 491, 693, 789, 1149, 2297
NmeAIII	GCCGAG	1 cut(s)	1940
NmuCI	GTSAC	4 cut(s)	1808, 2396, 2627, 2674
NsiI	ATGCAT	2 cut(s)	1113, 2688
NspI	RCATGY	3 cut(s)	317, 1115, 2520
OliI	CACNNNNGTG	1 cut(s)	626
PaeI	GCATGC	1 cut(s)	1115
PagI	TCATGA	2 cut(s)	454, 2857
PasI	CCCWGGG	1 cut(s)	144
PciI	ACATGT	1 cut(s)	313
PctI	GAATGC	2 cut(s)	905, 1072
PdmI	GAANNNNTTC	1 cut(s)	1946
PflMI	CCANNNNNTGG	3 cut(s)	58, 1597, 2537
PkrI	GCNGC	8 cut(s)	7, 1297, 1390, 1564, 1745, 2190, 2616, 2900
PleI	GAGTC	4 cut(s)	230, 262, 1194, 2717
PluTI	GGCGCC	1 cut(s)	164
PpsI	GAGTC	4 cut(s)	230, 262, 1194, 2717
PpuMI	RGGWCCY	1 cut(s)	2296
PscI	ACATGT	1 cut(s)	313
PshBI	ATTAAT	1 cut(s)	1470
Psp124BI	GAGCTC	1 cut(s)	2816
Psp5II	RGGWCCY	1 cut(s)	2296
Psp6I	CCWGG	5 cut(s)	51, 143, 2291, 2542, 2620
PspFI	CCCAGC	1 cut(s)	2228
PspGI	CCWGG	5 cut(s)	51, 143, 2291, 2542, 2620
PspN4I	GGNNCC	8 cut(s)	50, 141, 162, 491, 693, 789, 1149, 2297
PspOMI	GGGCCC	1 cut(s)	48
PspPI	GGNCC	7 cut(s)	48, 49, 490, 1616, 2296, 2540, 2734
PspPPI	RGGWCCY	1 cut(s)	2296
PstI	CTGCAG	1 cut(s)	1754
PstNI	CAGNNNCTG	1 cut(s)	1562
PsuI	RGATCY	1 cut(s)	2369
PvuII	CAGCTG	1 cut(s)	2614
RsaI	GTAC	6 cut(s)	11, 821, 1159, 1318, 2869, 2971
RsaNI	GTAC	6 cut(s)	10, 820, 1158, 1317, 2868, 2970
RseI	CAYNNNNRTG	8 cut(s)	188, 626, 996, 1442, 2257, 2494, 2681, 2856
SacI	GAGCTC	1 cut(s)	2816
SaqAI	TTAA	9 cut(s)	86, 710, 734, 894, 1268, 1334, 1370, 1470, 1839
SatI	GCNGC	8 cut(s)	6, 1296, 1389, 1563, 1744, 2189, 2615, 2899
Sau3AI	GATC	3 cut(s)	646, 970, 2369
Sau96I	GGNCC	7 cut(s)	48, 49, 490, 1616, 2296, 2540, 2734
ScaI	AGTACT	1 cut(s)	1318
SchI	GAGTC	4 cut(s)	230, 263, 1195, 2717
ScrFI	CCNGG	6 cut(s)	53, 145, 333, 2293, 2544, 2622
SduI	GDGCHC	3 cut(s)	52, 144, 2816
SfcI	CTRYAG	3 cut(s)	580, 1230, 1750
SfoI	GGCGCC	1 cut(s)	162
SinI	GGWCC	3 cut(s)	490, 2296, 2540
SmiMI	CAYNNNNRTG	8 cut(s)	188, 626, 996, 1442, 2257, 2494, 2681, 2856
SmlI	CTYRAG	4 cut(s)	85, 769, 1868, 2887
SmoI	CTYRAG	4 cut(s)	85, 769, 1868, 2887
SpeI	ACTAGT	1 cut(s)	1160
SphI	GCATGC	1 cut(s)	1115
SsiI	CCGC	5 cut(s)	5, 23, 409, 1432, 2899
SspDI	GGCGCC	1 cut(s)	160
SspI	AATATT	2 cut(s)	1720, 2015
SspMI	CTAG	7 cut(s)	63, 540, 678, 1025, 1161, 1683, 2118
SstI	GAGCTC	1 cut(s)	2816
StyD4I	CCNGG	6 cut(s)	51, 143, 331, 2291, 2542, 2620
StyI	CCWWGG	3 cut(s)	18, 720, 1917
TaiI	ACGT	4 cut(s)	128, 1129, 2112, 2436
TaqI	TCGA	1 cut(s)	912
TaqII	GACCGA	1 cut(s)	54
TatI	WGTACW	3 cut(s)	819, 1157, 1316
TauI	GCSGC	2 cut(s)	8, 2901
Tru1I	TTAA	9 cut(s)	86, 710, 734, 894, 1268, 1334, 1370, 1470, 1839
Tru9I	TTAA	9 cut(s)	86, 710, 734, 894, 1268, 1334, 1370, 1470, 1839
TscAI	CASTG	7 cut(s)	628, 688, 1234, 1401, 2401, 2538, 2636
TseFI	GTSAC	4 cut(s)	1808, 2396, 2627, 2674
TseI	GCWGC	6 cut(s)	1295, 1388, 1562, 1743, 2188, 2614
Tsp45I	GTSAC	4 cut(s)	1808, 2396, 2627, 2674
TspGWI	ACGGA	2 cut(s)	791, 2229
TspRI	CASTG	7 cut(s)	628, 688, 1234, 1401, 2401, 2538, 2636
Van91I	CCANNNNNTGG	3 cut(s)	58, 1597, 2537
Vha464I	CTTAAG	1 cut(s)	85
VpaK11BI	GGWCC	3 cut(s)	490, 2296, 2540
VspI	ATTAAT	1 cut(s)	1470
XapI	RAATTY	6 cut(s)	559, 640, 962, 1601, 2359, 2383
XceI	RCATGY	3 cut(s)	317, 1115, 2520
XcmI	CCANNNNNNNNNTGG	1 cut(s)	562
XmiI	GTMKAC	1 cut(s)	1530
XmnI	GAANNNNTTC	1 cut(s)	1946
XspI	CTAG	7 cut(s)	63, 540, 678, 1025, 1161, 1683, 2118
ZrmI	AGTACT	1 cut(s)	1318
Zsp2I	ATGCAT	2 cut(s)	1113, 2688

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.