3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77680 |
| fragaria_vesca | FvH4_2g26510 |
| malus_domestica | MD08G1168200.v1.1 MD15G1353600.v1.1 |
| prunus_persica | Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 |
| pyrus_communis | pycom08g14370 pycom15g31690 pycom15g31710 |
| rosa_chinensis | RchiOBHm_Chr6g0295321 |
| rosa_laevigata | RLG00000011813 |
| rosa_multiflora | Rmu_sc0012530.1_g000002 Rmu_sc0016917.1_g000001 |
| rosa_roxburghii | Rroxscaffold_171G00441480 Rroxscaffold_7G00172580 |
| rosa_rugosa | Rorug06G0250000 |
| rosa_samantha | Rh6AG363200 Rh6BG371300 Rh6CG377800 Rh6DG363900 |
| rosa_wichuraiana | Rw6G031690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 780 |
| Acc16I | TGCGCA | 2 cut(s) | 555, 2270 |
| Acc36I | ACCTGC | 3 cut(s) | 764, 959, 2274 |
| Acc65I | GGTACC | 1 cut(s) | 939 |
| AccB1I | GGYRCC | 3 cut(s) | 939, 1501, 2250 |
| AccI | GTMKAC | 2 cut(s) | 1944, 2809 |
| AccII | CGCG | 3 cut(s) | 11, 1327, 2576 |
| AciI | CCGC | 8 cut(s) | 11, 615, 1390, 1861, 2201, 2531, 2574, 2576 |
| AclI | AACGTT | 1 cut(s) | 451 |
| AclWI | GGATC | 5 cut(s) | 344, 665, 865, 1539, 3206 |
| AcoI | YGGCCR | 3 cut(s) | 1858, 1978, 2802 |
| AcuI | CTGAAG | 6 cut(s) | 247, 936, 2057, 2168, 2226, 2876 |
| AfaI | GTAC | 9 cut(s) | 18, 594, 718, 941, 1199, 2001, 2513, 3145, 3264 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 854, 1498 |
| AflIII | ACRYGT | 2 cut(s) | 2812, 2841 |
| AjnI | CCWGG | 6 cut(s) | 352, 409, 1493, 1669, 1783, 3058 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1916, 1948 |
| AleI | CACNNNNGTG | 1 cut(s) | 3011 |
| Alw21I | GWGCWC | 2 cut(s) | 2376, 3326 |
| Alw26I | GTCTC | 3 cut(s) | 642, 1086, 1789 |
| AlwI | GGATC | 5 cut(s) | 344, 665, 865, 1539, 3206 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2204 |
| AoxI | GGCC | 6 cut(s) | 570, 899, 1858, 1978, 2802, 2847 |
| ApaI | GGGCCC | 1 cut(s) | 2851 |
| ApeKI | GCWGC | 8 cut(s) | 70, 1322, 2438, 2690, 2726, 2777, 3158, 3161 |
| AseI | ATTAAT | 1 cut(s) | 1443 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 888, 2660 |
| Asp718I | GGTACC | 1 cut(s) | 939 |
| AspLEI | GCGC | 6 cut(s) | 11, 75, 556, 1327, 2271, 3076 |
| AspS9I | GGNCC | 6 cut(s) | 899, 1243, 2847, 2848, 2903, 3290 |
| AsuC2I | CCSGG | 1 cut(s) | 2255 |
| AsuHPI | GGTGA | 6 cut(s) | 399, 533, 893, 1304, 2520, 3293 |
| AsuNHI | GCTAGC | 1 cut(s) | 2935 |
| AvaII | GGWCC | 3 cut(s) | 1243, 2903, 3290 |
| AxyI | CCTNAGG | 3 cut(s) | 306, 867, 1506 |
| BaeGI | GKGCMC | 1 cut(s) | 2851 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2525, 2558 |
| BalI | TGGCCA | 2 cut(s) | 1980, 2804 |
| BanI | GGYRCC | 3 cut(s) | 939, 1501, 2250 |
| BanII | GRGCYC | 4 cut(s) | 2071, 2376, 2851, 3326 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2004, 2036 |
| Bbv12I | GWGCWC | 2 cut(s) | 2376, 3326 |
| BbvCI | CCTCAGC | 2 cut(s) | 106, 2589 |
| BbvI | GCAGC | 8 cut(s) | 82, 1309, 2425, 2677, 2713, 2764, 3145, 3173 |
| BccI | CCATC | 8 cut(s) | 38, 581, 1283, 1845, 1913, 2057, 2974, 3281 |
| BceAI | ACGGC | 3 cut(s) | 8, 60, 186 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 59, 93, 1527, 1561, 2669, 2703 |
| BciT130I | CCWGG | 6 cut(s) | 354, 411, 1495, 1671, 1785, 3060 |
| BciVI | GTATCC | 3 cut(s) | 1646, 2314, 2553 |
| BclI | TGATCA | 4 cut(s) | 175, 240, 922, 1023 |
| BcnI | CCSGG | 1 cut(s) | 2255 |
| BcoDI | GTCTC | 3 cut(s) | 642, 1086, 1789 |
| BfmI | CTRYAG | 4 cut(s) | 510, 2580, 3159, 3258 |
| BfoI | RGCGCY | 2 cut(s) | 76, 3077 |
| BfuAI | ACCTGC | 3 cut(s) | 764, 959, 2274 |
| BfuI | GTATCC | 3 cut(s) | 1646, 2314, 2553 |
| BglII | AGATCT | 1 cut(s) | 2017 |
| BlpI | GCTNAGC | 1 cut(s) | 624 |
| BmcAI | AGTACT | 2 cut(s) | 3145, 3264 |
| Bme1390I | CCNGG | 7 cut(s) | 354, 411, 1495, 1671, 1785, 2255, 3060 |
| Bme18I | GGWCC | 3 cut(s) | 1243, 2903, 3290 |
| BmgT120I | GGNCC | 6 cut(s) | 899, 1243, 2847, 2848, 2903, 3290 |
| BmiI | GGNNCC | 6 cut(s) | 941, 1503, 2252, 2259, 2849, 3292 |
| BmrFI | CCNGG | 7 cut(s) | 354, 411, 1495, 1671, 1785, 2255, 3060 |
| BmrI | ACTGGG | 1 cut(s) | 3134 |
| BmtI | GCTAGC | 1 cut(s) | 2939 |
| BmuI | ACTGGG | 1 cut(s) | 3134 |
| Bpu10I | CCTNAGC | 4 cut(s) | 106, 798, 978, 2589 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 624 |
| BpuEI | CTTGAG | 3 cut(s) | 1890, 2099, 2360 |
| BpuMI | CCSGG | 1 cut(s) | 2255 |
| Bsa29I | ATCGAT | 1 cut(s) | 3210 |
| BsaI | GGTCTC | 1 cut(s) | 1086 |
| BsaJI | CCNNGG | 6 cut(s) | 24, 1493, 1494, 1783, 2574, 3090 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 854, 1498 |
| Bse1I | ACTGG | 7 cut(s) | 488, 720, 1057, 2439, 2671, 2805, 3129 |
| Bse21I | CCTNAGG | 3 cut(s) | 306, 867, 1506 |
| Bse3DI | GCAATG | 3 cut(s) | 269, 1641, 2794 |
| BseBI | CCWGG | 6 cut(s) | 354, 411, 1495, 1671, 1785, 3060 |
| BseCI | ATCGAT | 1 cut(s) | 3210 |
| BseDI | CCNNGG | 6 cut(s) | 24, 1493, 1494, 1783, 2574, 3090 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 854, 1498 |
| BseMI | GCAATG | 3 cut(s) | 269, 1641, 2794 |
| BseNI | ACTGG | 7 cut(s) | 488, 720, 1057, 2439, 2671, 2805, 3129 |
| BseRI | GAGGAG | 4 cut(s) | 1074, 2065, 2186, 2606 |
| BseSI | GKGCMC | 1 cut(s) | 2851 |
| BseXI | GCAGC | 8 cut(s) | 82, 1309, 2425, 2677, 2713, 2764, 3145, 3173 |
| BseYI | CCCAGC | 1 cut(s) | 1832 |
| BsgI | GTGCAG | 2 cut(s) | 711, 3150 |
| Bsh1236I | CGCG | 3 cut(s) | 11, 1327, 2576 |
| BshFI | GGCC | 6 cut(s) | 572, 901, 1860, 1980, 2804, 2849 |
| BshNI | GGYRCC | 3 cut(s) | 939, 1501, 2250 |
| BshVI | ATCGAT | 1 cut(s) | 3210 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2376, 3326 |
| BsiSI | CCGG | 1 cut(s) | 2255 |
| BslFI | GGGAC | 1 cut(s) | 366 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 854, 1498 |
| BsmAI | GTCTC | 3 cut(s) | 642, 1086, 1789 |
| BsmFI | GGGAC | 1 cut(s) | 366 |
| BsmI | GAATGC | 2 cut(s) | 1384, 2133 |
| BsnI | GGCC | 6 cut(s) | 572, 901, 1860, 1980, 2804, 2849 |
| Bso31I | GGTCTC | 1 cut(s) | 1086 |
| Bsp120I | GGGCCC | 1 cut(s) | 2847 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2071, 2376, 2851, 3326 |
| Bsp1407I | TGTACA | 2 cut(s) | 16, 2511 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 624 |
| BspACI | CCGC | 8 cut(s) | 11, 615, 1390, 1861, 2201, 2531, 2574, 2576 |
| BspANI | GGCC | 6 cut(s) | 572, 901, 1860, 1980, 2804, 2849 |
| BspDI | ATCGAT | 1 cut(s) | 3210 |
| BspFNI | CGCG | 3 cut(s) | 11, 1327, 2576 |
| BspHI | TCATGA | 1 cut(s) | 2406 |
| BspLI | GGNNCC | 6 cut(s) | 941, 1503, 2252, 2259, 2849, 3292 |
| BspMAI | CTGCAG | 1 cut(s) | 3163 |
| BspMI | ACCTGC | 3 cut(s) | 764, 959, 2274 |
| BspOI | GCTAGC | 1 cut(s) | 2939 |
| BspPI | GGATC | 5 cut(s) | 344, 665, 865, 1539, 3206 |
| BspQI | GCTCTTC | 2 cut(s) | 2076, 2364 |
| BspT107I | GGYRCC | 3 cut(s) | 939, 1501, 2250 |
| BspTNI | GGTCTC | 1 cut(s) | 1086 |
| BsrDI | GCAATG | 3 cut(s) | 269, 1641, 2794 |
| BsrGI | TGTACA | 2 cut(s) | 16, 2511 |
| BsrI | ACTGG | 7 cut(s) | 488, 720, 1057, 2439, 2671, 2805, 3129 |
| BssECI | CCNNGG | 6 cut(s) | 24, 1493, 1494, 1783, 2574, 3090 |
| BssT1I | CCWWGG | 1 cut(s) | 3090 |
| Bst2UI | CCWGG | 6 cut(s) | 354, 411, 1495, 1671, 1785, 3060 |
| Bst4CI | ACNGT | 4 cut(s) | 681, 732, 1125, 1867 |
| Bst6I | CTCTTC | 3 cut(s) | 103, 2076, 2364 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2566 |
| BstAUI | TGTACA | 2 cut(s) | 16, 2511 |
| BstC8I | GCNNGC | 4 cut(s) | 842, 1886, 2802, 2937 |
| BstDSI | CCRYGG | 2 cut(s) | 24, 2574 |
| BstFNI | CGCG | 3 cut(s) | 11, 1327, 2576 |
| BstH2I | RGCGCY | 2 cut(s) | 76, 3077 |
| BstHHI | GCGC | 6 cut(s) | 11, 75, 556, 1327, 2271, 3076 |
| BstMAI | GTCTC | 3 cut(s) | 642, 1086, 1789 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 280, 533, 1364, 2566, 2585, 2723, 2982, 3095 |
| BstNI | CCWGG | 6 cut(s) | 354, 411, 1495, 1671, 1785, 3060 |
| BstNSI | RCATGY | 2 cut(s) | 2816, 2845 |
| BstSCI | CCNGG | 7 cut(s) | 352, 409, 1493, 1669, 1783, 2253, 3058 |
| BstSFI | CTRYAG | 4 cut(s) | 510, 2580, 3159, 3258 |
| BstSLI | GKGCMC | 1 cut(s) | 2851 |
| BstUI | CGCG | 3 cut(s) | 11, 1327, 2576 |
| BstV1I | GCAGC | 8 cut(s) | 82, 1309, 2425, 2677, 2713, 2764, 3145, 3173 |
| BstX2I | RGATCY | 2 cut(s) | 1531, 2017 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3173 |
| BstYI | RGATCY | 2 cut(s) | 1531, 2017 |
| Bsu15I | ATCGAT | 1 cut(s) | 3210 |
| Bsu36I | CCTNAGG | 3 cut(s) | 306, 867, 1506 |
| BsuI | GTATCC | 3 cut(s) | 1646, 2314, 2553 |
| BsuRI | GGCC | 6 cut(s) | 572, 901, 1860, 1980, 2804, 2849 |
| BsuTUI | ATCGAT | 1 cut(s) | 3210 |
| BtgI | CCRYGG | 2 cut(s) | 24, 2574 |
| BtsI | GCAGTG | 1 cut(s) | 142 |
| BtsIMutI | CAGTG | 7 cut(s) | 142, 396, 481, 1130, 1575, 1863, 2664 |
| BveI | ACCTGC | 3 cut(s) | 764, 959, 2274 |
| Cac8I | GCNNGC | 4 cut(s) | 842, 1886, 2802, 2937 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2204 |
| CciI | TCATGA | 1 cut(s) | 2406 |
| CfoI | GCGC | 6 cut(s) | 11, 75, 556, 1327, 2271, 3076 |
| Cfr13I | GGNCC | 6 cut(s) | 899, 1243, 2847, 2848, 2903, 3290 |
| Cfr42I | CCGCGG | 1 cut(s) | 2577 |
| ClaI | ATCGAT | 1 cut(s) | 3210 |
| CseI | GACGC | 2 cut(s) | 515, 3045 |
| Csp6I | GTAC | 9 cut(s) | 17, 593, 717, 940, 1198, 2000, 2512, 3144, 3263 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1221, 1256 |
| CviQI | GTAC | 9 cut(s) | 17, 593, 717, 940, 1198, 2000, 2512, 3144, 3263 |
| DraI | TTTAAA | 1 cut(s) | 532 |
| EaeI | YGGCCR | 3 cut(s) | 1858, 1978, 2802 |
| Eam1104I | CTCTTC | 3 cut(s) | 103, 2076, 2364 |
| EarI | CTCTTC | 3 cut(s) | 103, 2076, 2364 |
| EciI | GGCGGA | 1 cut(s) | 630 |
| Ecl136II | GAGCTC | 2 cut(s) | 2374, 3324 |
| Eco130I | CCWWGG | 1 cut(s) | 3090 |
| Eco147I | AGGCCT | 1 cut(s) | 572 |
| Eco24I | GRGCYC | 4 cut(s) | 2071, 2376, 2851, 3326 |
| Eco31I | GGTCTC | 1 cut(s) | 1086 |
| Eco32I | GATATC | 2 cut(s) | 2214, 3301 |
| Eco47I | GGWCC | 3 cut(s) | 1243, 2903, 3290 |
| Eco53kI | GAGCTC | 2 cut(s) | 2374, 3324 |
| Eco57I | CTGAAG | 6 cut(s) | 247, 936, 2057, 2168, 2226, 2876 |
| Eco81I | CCTNAGG | 3 cut(s) | 306, 867, 1506 |
| EcoICRI | GAGCTC | 2 cut(s) | 2374, 3324 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2848, 2903 |
| EcoRI | GAATTC | 2 cut(s) | 1514, 2745 |
| EcoRII | CCWGG | 6 cut(s) | 352, 409, 1493, 1669, 1783, 3058 |
| EcoRV | GATATC | 2 cut(s) | 2214, 3301 |
| EcoT14I | CCWWGG | 1 cut(s) | 3090 |
| EcoT38I | GRGCYC | 4 cut(s) | 2071, 2376, 2851, 3326 |
| ErhI | CCWWGG | 1 cut(s) | 3090 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 981, 1013 |
| FaqI | GGGAC | 1 cut(s) | 366 |
| FauI | CCCGC | 1 cut(s) | 1383 |
| FauNDI | CATATG | 1 cut(s) | 226 |
| FbaI | TGATCA | 4 cut(s) | 175, 240, 922, 1023 |
| FblI | GTMKAC | 2 cut(s) | 1944, 2809 |
| FriOI | GRGCYC | 4 cut(s) | 2071, 2376, 2851, 3326 |
| FspAI | RTGCGCAY | 1 cut(s) | 555 |
| FspI | TGCGCA | 2 cut(s) | 555, 2270 |
| GlaI | GCGC | 6 cut(s) | 10, 74, 555, 1326, 2270, 3075 |
| GsaI | CCCAGC | 1 cut(s) | 1836 |
| HaeII | RGCGCY | 2 cut(s) | 76, 3077 |
| HaeIII | GGCC | 6 cut(s) | 572, 901, 1860, 1980, 2804, 2849 |
| HapII | CCGG | 1 cut(s) | 2255 |
| HgaI | GACGC | 2 cut(s) | 515, 3045 |
| HhaI | GCGC | 6 cut(s) | 11, 75, 556, 1327, 2271, 3076 |
| Hin6I | GCGC | 6 cut(s) | 9, 73, 554, 1325, 2269, 3074 |
| HinP1I | GCGC | 6 cut(s) | 9, 73, 554, 1325, 2269, 3074 |
| HincII | GTYRAC | 2 cut(s) | 31, 1846 |
| HindII | GTYRAC | 2 cut(s) | 31, 1846 |
| HindIII | AAGCTT | 2 cut(s) | 525, 1886 |
| HpaII | CCGG | 1 cut(s) | 2255 |
| HphI | GGTGA | 6 cut(s) | 399, 533, 893, 1304, 2520, 3293 |
| Hpy166II | GTNNAC | 5 cut(s) | 31, 1846, 1945, 2514, 2810 |
| Hpy188I | TCNGA | 9 cut(s) | 148, 955, 1453, 1538, 1762, 2143, 2613, 2758, 2881 |
| Hpy8I | GTNNAC | 5 cut(s) | 31, 1846, 1945, 2514, 2810 |
| Hpy99I | CGWCG | 3 cut(s) | 81, 2541, 2952 |
| HpyCH4III | ACNGT | 4 cut(s) | 681, 732, 1125, 1867 |
| HpyCH4IV | ACGT | 3 cut(s) | 451, 2536, 2947 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 280, 533, 1364, 2566, 2585, 2723, 2982, 3095 |
| HpySE526I | ACGT | 3 cut(s) | 451, 2536, 2947 |
| HspAI | GCGC | 6 cut(s) | 9, 73, 554, 1325, 2269, 3074 |
| KpnI | GGTACC | 1 cut(s) | 943 |
| Ksp22I | TGATCA | 4 cut(s) | 175, 240, 922, 1023 |
| KspI | CCGCGG | 1 cut(s) | 2577 |
| LguI | GCTCTTC | 2 cut(s) | 2076, 2364 |
| LmnI | GCTCC | 2 cut(s) | 463, 1363 |
| Lsp1109I | GCAGC | 8 cut(s) | 82, 1309, 2425, 2677, 2713, 2764, 3145, 3173 |
| MaeII | ACGT | 3 cut(s) | 451, 2536, 2947 |
| MaeIII | GTNAC | 5 cut(s) | 181, 1653, 1722, 2486, 2828 |
| MfeI | CAATTG | 2 cut(s) | 903, 3273 |
| MflI | RGATCY | 2 cut(s) | 1531, 2017 |
| MhlI | GDGCHC | 4 cut(s) | 2071, 2376, 2851, 3326 |
| MlsI | TGGCCA | 2 cut(s) | 1980, 2804 |
| MluNI | TGGCCA | 2 cut(s) | 1980, 2804 |
| MlyI | GAGTC | 3 cut(s) | 555, 2705, 3226 |
| MmeI | TCCRAC | 3 cut(s) | 714, 2368, 3115 |
| Mox20I | TGGCCA | 2 cut(s) | 1980, 2804 |
| MroXI | GAANNNNTTC | 2 cut(s) | 888, 2660 |
| MscI | TGGCCA | 2 cut(s) | 1980, 2804 |
| MseI | TTAA | 8 cut(s) | 531, 663, 744, 1113, 1443, 1779, 1929, 2631 |
| MslI | CAYNNNNRTG | 4 cut(s) | 288, 656, 1205, 3011 |
| Msp20I | TGGCCA | 2 cut(s) | 1980, 2804 |
| MspA1I | CMGCKG | 4 cut(s) | 707, 2201, 2576, 2726 |
| MspI | CCGG | 1 cut(s) | 2255 |
| MspR9I | CCNGG | 7 cut(s) | 354, 411, 1495, 1671, 1785, 2255, 3060 |
| MunI | CAATTG | 2 cut(s) | 903, 3273 |
| Mva1269I | GAATGC | 2 cut(s) | 1384, 2133 |
| MvaI | CCWGG | 6 cut(s) | 354, 411, 1495, 1671, 1785, 3060 |
| MvnI | CGCG | 3 cut(s) | 11, 1327, 2576 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 280, 533, 1364, 2566, 2585, 2723, 2982, 3095 |
| NciI | CCSGG | 1 cut(s) | 2255 |
| NdeI | CATATG | 1 cut(s) | 226 |
| NheI | GCTAGC | 1 cut(s) | 2935 |
| NlaIV | GGNNCC | 6 cut(s) | 941, 1503, 2252, 2259, 2849, 3292 |
| NmuCI | GTSAC | 4 cut(s) | 1653, 1722, 2486, 2828 |
| NsbI | TGCGCA | 2 cut(s) | 555, 2270 |
| NspI | RCATGY | 2 cut(s) | 2816, 2845 |
| OliI | CACNNNNGTG | 1 cut(s) | 3011 |
| PagI | TCATGA | 1 cut(s) | 2406 |
| PasI | CCCWGGG | 1 cut(s) | 1494 |
| PceI | AGGCCT | 1 cut(s) | 572 |
| PciI | ACATGT | 2 cut(s) | 2812, 2841 |
| PciSI | GCTCTTC | 2 cut(s) | 2076, 2364 |
| PctI | GAATGC | 2 cut(s) | 1384, 2133 |
| PdmI | GAANNNNTTC | 2 cut(s) | 888, 2660 |
| PleI | GAGTC | 3 cut(s) | 554, 2704, 3226 |
| PpsI | GAGTC | 3 cut(s) | 554, 2704, 3226 |
| PpuMI | RGGWCCY | 1 cut(s) | 2903 |
| PscI | ACATGT | 2 cut(s) | 2812, 2841 |
| PshBI | ATTAAT | 1 cut(s) | 1443 |
| PsiI | TTATAA | 1 cut(s) | 780 |
| Psp124BI | GAGCTC | 2 cut(s) | 2376, 3326 |
| Psp1406I | AACGTT | 1 cut(s) | 451 |
| Psp5II | RGGWCCY | 1 cut(s) | 2903 |
| Psp6I | CCWGG | 6 cut(s) | 352, 409, 1493, 1669, 1783, 3058 |
| PspFI | CCCAGC | 1 cut(s) | 1832 |
| PspGI | CCWGG | 6 cut(s) | 352, 409, 1493, 1669, 1783, 3058 |
| PspN4I | GGNNCC | 6 cut(s) | 941, 1503, 2252, 2259, 2849, 3292 |
| PspOMI | GGGCCC | 1 cut(s) | 2847 |
| PspPI | GGNCC | 6 cut(s) | 899, 1243, 2847, 2848, 2903, 3290 |
| PspPPI | RGGWCCY | 1 cut(s) | 2903 |
| PstI | CTGCAG | 1 cut(s) | 3163 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2204 |
| PsuI | RGATCY | 2 cut(s) | 1531, 2017 |
| PvuII | CAGCTG | 2 cut(s) | 707, 2726 |
| RsaI | GTAC | 9 cut(s) | 18, 594, 718, 941, 1199, 2001, 2513, 3145, 3264 |
| RsaNI | GTAC | 9 cut(s) | 17, 593, 717, 940, 1198, 2000, 2512, 3144, 3263 |
| RseI | CAYNNNNRTG | 4 cut(s) | 288, 656, 1205, 3011 |
| SacI | GAGCTC | 2 cut(s) | 2376, 3326 |
| SacII | CCGCGG | 1 cut(s) | 2577 |
| SapI | GCTCTTC | 2 cut(s) | 2076, 2364 |
| SaqAI | TTAA | 8 cut(s) | 531, 663, 744, 1113, 1443, 1779, 1929, 2631 |
| Sau96I | GGNCC | 6 cut(s) | 899, 1243, 2847, 2848, 2903, 3290 |
| ScaI | AGTACT | 2 cut(s) | 3145, 3264 |
| SchI | GAGTC | 3 cut(s) | 555, 2705, 3226 |
| ScrFI | CCNGG | 7 cut(s) | 354, 411, 1495, 1671, 1785, 2255, 3060 |
| SduI | GDGCHC | 4 cut(s) | 2071, 2376, 2851, 3326 |
| SfcI | CTRYAG | 4 cut(s) | 510, 2580, 3159, 3258 |
| Sfr303I | CCGCGG | 1 cut(s) | 2577 |
| SgrBI | CCGCGG | 1 cut(s) | 2577 |
| SinI | GGWCC | 3 cut(s) | 1243, 2903, 3290 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 288, 656, 1205, 3011 |
| SmlI | CTYRAG | 3 cut(s) | 1905, 2078, 2375 |
| SmoI | CTYRAG | 3 cut(s) | 1905, 2078, 2375 |
| SseBI | AGGCCT | 1 cut(s) | 572 |
| SsiI | CCGC | 8 cut(s) | 11, 615, 1390, 1861, 2201, 2531, 2574, 2576 |
| SspI | AATATT | 3 cut(s) | 417, 470, 2401 |
| SstI | GAGCTC | 2 cut(s) | 2376, 3326 |
| StuI | AGGCCT | 1 cut(s) | 572 |
| StyD4I | CCNGG | 7 cut(s) | 352, 409, 1493, 1669, 1783, 2253, 3058 |
| StyI | CCWWGG | 1 cut(s) | 3090 |
| TaaI | ACNGT | 4 cut(s) | 681, 732, 1125, 1867 |
| TaiI | ACGT | 3 cut(s) | 454, 2539, 2950 |
| TaqI | TCGA | 7 cut(s) | 832, 1218, 1305, 1560, 2679, 2950, 3210 |
| TaqII | GACCGA | 1 cut(s) | 1863 |
| TatI | WGTACW | 6 cut(s) | 16, 1197, 1999, 2511, 3143, 3262 |
| TauI | GCSGC | 3 cut(s) | 1863, 2204, 2579 |
| Tru1I | TTAA | 8 cut(s) | 531, 663, 744, 1113, 1443, 1779, 1929, 2631 |
| Tru9I | TTAA | 8 cut(s) | 531, 663, 744, 1113, 1443, 1779, 1929, 2631 |
| TscAI | CASTG | 7 cut(s) | 142, 396, 488, 1130, 1582, 1870, 2671 |
| TseFI | GTSAC | 4 cut(s) | 1653, 1722, 2486, 2828 |
| TseI | GCWGC | 8 cut(s) | 70, 1322, 2438, 2690, 2726, 2777, 3158, 3161 |
| Tsp45I | GTSAC | 4 cut(s) | 1653, 1722, 2486, 2828 |
| TspGWI | ACGGA | 2 cut(s) | 1741, 2112 |
| TspRI | CASTG | 7 cut(s) | 142, 396, 488, 1130, 1582, 1870, 2671 |
| VpaK11BI | GGWCC | 3 cut(s) | 1243, 2903, 3290 |
| VspI | ATTAAT | 1 cut(s) | 1443 |
| XbaI | TCTAGA | 4 cut(s) | 1582, 1700, 2216, 2311 |
| XceI | RCATGY | 2 cut(s) | 2816, 2845 |
| XmiI | GTMKAC | 2 cut(s) | 1944, 2809 |
| XmnI | GAANNNNTTC | 2 cut(s) | 888, 2660 |
| ZrmI | AGTACT | 2 cut(s) | 3145, 3264 |