3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77680 |
| fragaria_vesca | FvH4_2g26510 |
| malus_domestica | MD08G1168200.v1.1 MD15G1353600.v1.1 |
| prunus_persica | Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 Prupe.1G501900_v2.0.a1 |
| pyrus_communis | pycom08g14370 pycom15g31690 pycom15g31710 |
| rosa_chinensis | RchiOBHm_Chr6g0295321 |
| rosa_laevigata | RLG00000011813 |
| rosa_multiflora | Rmu_sc0012530.1_g000002 Rmu_sc0016917.1_g000001 |
| rosa_roxburghii | Rroxscaffold_171G00441480 Rroxscaffold_7G00172580 |
| rosa_rugosa | Rorug06G0250000 |
| rosa_samantha | Rh6AG363200 Rh6BG371300 Rh6CG377800 Rh6DG363900 |
| rosa_wichuraiana | Rw6G031690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 765 |
| Acc16I | TGCGCA | 1 cut(s) | 2288 |
| Acc36I | ACCTGC | 1 cut(s) | 950 |
| AccB1I | GGYRCC | 4 cut(s) | 69, 1495, 2084, 2268 |
| AccI | GTMKAC | 3 cut(s) | 30, 2531, 2827 |
| AccII | CGCG | 2 cut(s) | 11, 534 |
| AciI | CCGC | 8 cut(s) | 9, 11, 67, 76, 1257, 2263, 2549, 3104 |
| AclI | AACGTT | 1 cut(s) | 319 |
| AclWI | GGATC | 7 cut(s) | 653, 697, 735, 850, 1533, 1550, 2132 |
| AcoI | YGGCCR | 4 cut(s) | 1566, 1852, 1996, 2820 |
| AcuI | CTGAAG | 5 cut(s) | 927, 1413, 2075, 2244, 2894 |
| AcyI | GRCGYC | 1 cut(s) | 70 |
| AfaI | GTAC | 8 cut(s) | 932, 1193, 1398, 2773, 3033, 3046, 3261, 3314 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 81, 387, 839, 1492 |
| AflIII | ACRYGT | 1 cut(s) | 2830 |
| AjnI | CCWGG | 4 cut(s) | 394, 677, 1777, 3076 |
| AleI | CACNNNNGTG | 1 cut(s) | 142 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2505, 2537 |
| Alw21I | GWGCWC | 1 cut(s) | 2257 |
| Alw26I | GTCTC | 3 cut(s) | 630, 1487, 2652 |
| Alw44I | GTGCAC | 1 cut(s) | 2253 |
| AlwI | GGATC | 7 cut(s) | 653, 697, 735, 850, 1533, 1550, 2132 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2222, 2371 |
| AoxI | GGCC | 5 cut(s) | 558, 1566, 1852, 1996, 2820 |
| ApaLI | GTGCAC | 1 cut(s) | 2253 |
| AseI | ATTAAT | 2 cut(s) | 1437, 2973 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3160 |
| AspA2I | CCTAGG | 1 cut(s) | 1499 |
| AspLEI | GCGC | 4 cut(s) | 72, 2289, 3057, 3094 |
| AspS9I | GGNCC | 7 cut(s) | 474, 675, 1237, 1813, 2865, 2921, 3287 |
| AsuII | TTCGAA | 2 cut(s) | 1425, 1531 |
| AvaII | GGWCC | 7 cut(s) | 474, 675, 1237, 1813, 2865, 2921, 3287 |
| AvrII | CCTAGG | 1 cut(s) | 1499 |
| AxyI | CCTNAGG | 1 cut(s) | 834 |
| BaeGI | GKGCMC | 2 cut(s) | 2089, 2257 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 741, 774, 2543, 2576 |
| BalI | TGGCCA | 2 cut(s) | 1998, 2822 |
| BanI | GGYRCC | 4 cut(s) | 69, 1495, 2084, 2268 |
| BanII | GRGCYC | 2 cut(s) | 3174, 3213 |
| BauI | CACGAG | 1 cut(s) | 1320 |
| BbsI | GAAGAC | 2 cut(s) | 1466, 3230 |
| Bbv12I | GWGCWC | 1 cut(s) | 2257 |
| BbvCI | CCTCAGC | 2 cut(s) | 426, 2607 |
| BceAI | ACGGC | 2 cut(s) | 8, 1581 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1521, 1555 |
| BciT130I | CCWGG | 4 cut(s) | 396, 679, 1779, 3078 |
| BciVI | GTATCC | 3 cut(s) | 1640, 2332, 2571 |
| BclI | TGATCA | 1 cut(s) | 913 |
| BcoDI | GTCTC | 3 cut(s) | 630, 1487, 2652 |
| BfmI | CTRYAG | 5 cut(s) | 585, 753, 2598, 2745, 3255 |
| BfoI | RGCGCY | 2 cut(s) | 73, 3095 |
| BfuAI | ACCTGC | 1 cut(s) | 950 |
| BfuI | GTATCC | 3 cut(s) | 1640, 2332, 2571 |
| BglII | AGATCT | 1 cut(s) | 2024 |
| BlnI | CCTAGG | 1 cut(s) | 1499 |
| BlpI | GCTNAGC | 1 cut(s) | 612 |
| BmcAI | AGTACT | 1 cut(s) | 3261 |
| Bme1390I | CCNGG | 4 cut(s) | 396, 679, 1779, 3078 |
| Bme18I | GGWCC | 7 cut(s) | 474, 675, 1237, 1813, 2865, 2921, 3287 |
| BmgT120I | GGNCC | 7 cut(s) | 474, 675, 1237, 1813, 2865, 2921, 3287 |
| BmiI | GGNNCC | 7 cut(s) | 71, 418, 1497, 2086, 2270, 2867, 2922 |
| BmrFI | CCNGG | 4 cut(s) | 396, 679, 1779, 3078 |
| BmrI | ACTGGG | 1 cut(s) | 2763 |
| BmuI | ACTGGG | 1 cut(s) | 2763 |
| BpiI | GAAGAC | 2 cut(s) | 1466, 3230 |
| BpmI | CTGGAG | 2 cut(s) | 978, 2393 |
| Bpu10I | CCTNAGC | 5 cut(s) | 90, 148, 426, 1899, 2607 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 612 |
| Bpu14I | TTCGAA | 2 cut(s) | 1425, 1531 |
| BpuEI | CTTGAG | 1 cut(s) | 2378 |
| Bsa29I | ATCGAT | 1 cut(s) | 1843 |
| BsaAI | YACGTR | 1 cut(s) | 3044 |
| BsaHI | GRCGYC | 1 cut(s) | 70 |
| BsaJI | CCNNGG | 9 cut(s) | 9, 186, 477, 783, 1217, 1487, 1499, 1563, 3213 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 81, 387, 839, 1492 |
| Bse118I | RCCGGY | 1 cut(s) | 2556 |
| Bse1I | ACTGG | 9 cut(s) | 476, 719, 995, 1051, 2376, 2689, 2769, 2823, 3290 |
| Bse21I | CCTNAGG | 1 cut(s) | 834 |
| Bse3DI | GCAATG | 4 cut(s) | 2757, 2800, 2812, 3187 |
| BseBI | CCWGG | 4 cut(s) | 396, 679, 1779, 3078 |
| BseCI | ATCGAT | 1 cut(s) | 1843 |
| BseDI | CCNNGG | 9 cut(s) | 9, 186, 477, 783, 1217, 1487, 1499, 1563, 3213 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 81, 387, 839, 1492 |
| BseMI | GCAATG | 4 cut(s) | 2757, 2800, 2812, 3187 |
| BseMII | CTCAG | 8 cut(s) | 132, 440, 603, 825, 843, 1913, 2000, 2598 |
| BseNI | ACTGG | 9 cut(s) | 476, 719, 995, 1051, 2376, 2689, 2769, 2823, 3290 |
| BseRI | GAGGAG | 3 cut(s) | 2083, 2204, 2624 |
| BseSI | GKGCMC | 2 cut(s) | 2089, 2257 |
| BseYI | CCCAGC | 2 cut(s) | 1826, 3173 |
| BsgI | GTGCAG | 2 cut(s) | 699, 1302 |
| Bsh1236I | CGCG | 2 cut(s) | 11, 534 |
| BshFI | GGCC | 5 cut(s) | 560, 1568, 1854, 1998, 2822 |
| BshNI | GGYRCC | 4 cut(s) | 69, 1495, 2084, 2268 |
| BshVI | ATCGAT | 1 cut(s) | 1843 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2257 |
| BsiSI | CCGG | 2 cut(s) | 1855, 2557 |
| BslFI | GGGAC | 5 cut(s) | 198, 291, 1148, 2851, 2934 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 81, 387, 839, 1492 |
| BsmAI | GTCTC | 3 cut(s) | 630, 1487, 2652 |
| BsmBI | CGTCTC | 1 cut(s) | 1487 |
| BsmFI | GGGAC | 5 cut(s) | 198, 291, 1148, 2851, 2934 |
| BsnI | GGCC | 5 cut(s) | 560, 1568, 1854, 1998, 2822 |
| Bsp119I | TTCGAA | 2 cut(s) | 1425, 1531 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2089, 2257, 3174, 3213 |
| Bsp1407I | TGTACA | 1 cut(s) | 3312 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 612 |
| Bsp19I | CCATGG | 3 cut(s) | 477, 1487, 3213 |
| BspACI | CCGC | 8 cut(s) | 9, 11, 67, 76, 1257, 2263, 2549, 3104 |
| BspANI | GGCC | 5 cut(s) | 560, 1568, 1854, 1998, 2822 |
| BspCNI | CTCAG | 8 cut(s) | 133, 439, 604, 826, 844, 1912, 1999, 2599 |
| BspDI | ATCGAT | 1 cut(s) | 1843 |
| BspFNI | CGCG | 2 cut(s) | 11, 534 |
| BspHI | TCATGA | 1 cut(s) | 2424 |
| BspLI | GGNNCC | 7 cut(s) | 71, 418, 1497, 2086, 2270, 2867, 2922 |
| BspMAI | CTGCAG | 2 cut(s) | 757, 2749 |
| BspMI | ACCTGC | 1 cut(s) | 950 |
| BspPI | GGATC | 7 cut(s) | 653, 697, 735, 850, 1533, 1550, 2132 |
| BspT104I | TTCGAA | 2 cut(s) | 1425, 1531 |
| BspT107I | GGYRCC | 4 cut(s) | 69, 1495, 2084, 2268 |
| BsrDI | GCAATG | 4 cut(s) | 2757, 2800, 2812, 3187 |
| BsrFI | RCCGGY | 1 cut(s) | 2556 |
| BsrGI | TGTACA | 1 cut(s) | 3312 |
| BsrI | ACTGG | 9 cut(s) | 476, 719, 995, 1051, 2376, 2689, 2769, 2823, 3290 |
| BssAI | RCCGGY | 1 cut(s) | 2556 |
| BssECI | CCNNGG | 9 cut(s) | 9, 186, 477, 783, 1217, 1487, 1499, 1563, 3213 |
| BssNAI | GTATAC | 1 cut(s) | 2532 |
| BssNI | GRCGYC | 1 cut(s) | 70 |
| BssSI | CACGAG | 1 cut(s) | 1320 |
| BssT1I | CCWWGG | 7 cut(s) | 186, 477, 783, 1217, 1487, 1499, 3213 |
| Bst1107I | GTATAC | 1 cut(s) | 2532 |
| Bst2BI | CACGAG | 1 cut(s) | 1320 |
| Bst2UI | CCWGG | 4 cut(s) | 396, 679, 1779, 3078 |
| Bst4CI | ACNGT | 4 cut(s) | 1613, 1861, 2252, 3232 |
| BstACI | GRCGYC | 1 cut(s) | 70 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3186 |
| BstAUI | TGTACA | 1 cut(s) | 3312 |
| BstBAI | YACGTR | 1 cut(s) | 3044 |
| BstBI | TTCGAA | 2 cut(s) | 1425, 1531 |
| BstC8I | GCNNGC | 8 cut(s) | 703, 1257, 1880, 1896, 2291, 2454, 2820, 2955 |
| BstDSI | CCRYGG | 5 cut(s) | 9, 477, 1487, 1563, 3213 |
| BstEII | GGTNACC | 1 cut(s) | 390 |
| BstFNI | CGCG | 2 cut(s) | 11, 534 |
| BstH2I | RGCGCY | 2 cut(s) | 73, 3095 |
| BstHHI | GCGC | 4 cut(s) | 72, 2289, 3057, 3094 |
| BstMAI | GTCTC | 3 cut(s) | 630, 1487, 2652 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 91, 274, 521, 1358, 2275, 2284, 2603, 2741, 3186 |
| BstNI | CCWGG | 4 cut(s) | 396, 679, 1779, 3078 |
| BstNSI | RCATGY | 3 cut(s) | 1376, 1898, 2834 |
| BstPI | GGTNACC | 1 cut(s) | 390 |
| BstSCI | CCNGG | 4 cut(s) | 394, 677, 1777, 3076 |
| BstSFI | CTRYAG | 5 cut(s) | 585, 753, 2598, 2745, 3255 |
| BstSLI | GKGCMC | 2 cut(s) | 2089, 2257 |
| BstSNI | TACGTA | 1 cut(s) | 3044 |
| BstUI | CGCG | 2 cut(s) | 11, 534 |
| BstV2I | GAAGAC | 2 cut(s) | 1466, 3230 |
| BstX2I | RGATCY | 5 cut(s) | 689, 727, 1525, 2024, 2137 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 187, 1576 |
| BstYI | RGATCY | 5 cut(s) | 689, 727, 1525, 2024, 2137 |
| BstZ17I | GTATAC | 1 cut(s) | 2532 |
| Bsu15I | ATCGAT | 1 cut(s) | 1843 |
| Bsu36I | CCTNAGG | 1 cut(s) | 834 |
| BsuI | GTATCC | 3 cut(s) | 1640, 2332, 2571 |
| BsuRI | GGCC | 5 cut(s) | 560, 1568, 1854, 1998, 2822 |
| BsuTUI | ATCGAT | 1 cut(s) | 1843 |
| BtgI | CCRYGG | 5 cut(s) | 9, 477, 1487, 1563, 3213 |
| BtgZI | GCGATG | 2 cut(s) | 1706, 2564 |
| BtsIMutI | CAGTG | 5 cut(s) | 469, 2257, 2369, 2682, 3237 |
| BveI | ACCTGC | 1 cut(s) | 950 |
| Cac8I | GCNNGC | 8 cut(s) | 703, 1257, 1880, 1896, 2291, 2454, 2820, 2955 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2222, 2371 |
| CciI | TCATGA | 1 cut(s) | 2424 |
| CfoI | GCGC | 4 cut(s) | 72, 2289, 3057, 3094 |
| Cfr10I | RCCGGY | 1 cut(s) | 2556 |
| Cfr13I | GGNCC | 7 cut(s) | 474, 675, 1237, 1813, 2865, 2921, 3287 |
| Cfr42I | CCGCGG | 1 cut(s) | 12 |
| ClaI | ATCGAT | 1 cut(s) | 1843 |
| CseI | GACGC | 4 cut(s) | 123, 503, 523, 3224 |
| Csp6I | GTAC | 8 cut(s) | 931, 1192, 1397, 2772, 3032, 3045, 3260, 3313 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1215, 1250 |
| CviQI | GTAC | 8 cut(s) | 931, 1192, 1397, 2772, 3032, 3045, 3260, 3313 |
| DinI | GGCGCC | 1 cut(s) | 71 |
| DraI | TTTAAA | 1 cut(s) | 520 |
| EaeI | YGGCCR | 4 cut(s) | 1566, 1852, 1996, 2820 |
| Eco105I | TACGTA | 1 cut(s) | 3044 |
| Eco130I | CCWWGG | 7 cut(s) | 186, 477, 783, 1217, 1487, 1499, 3213 |
| Eco147I | AGGCCT | 1 cut(s) | 560 |
| Eco24I | GRGCYC | 2 cut(s) | 3174, 3213 |
| Eco47I | GGWCC | 7 cut(s) | 474, 675, 1237, 1813, 2865, 2921, 3287 |
| Eco57I | CTGAAG | 5 cut(s) | 927, 1413, 2075, 2244, 2894 |
| Eco81I | CCTNAGG | 1 cut(s) | 834 |
| Eco91I | GGTNACC | 1 cut(s) | 390 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2921 |
| EcoO65I | GGTNACC | 1 cut(s) | 390 |
| EcoRII | CCWGG | 4 cut(s) | 394, 677, 1777, 3076 |
| EcoT14I | CCWWGG | 7 cut(s) | 186, 477, 783, 1217, 1487, 1499, 3213 |
| EcoT38I | GRGCYC | 2 cut(s) | 3174, 3213 |
| EgeI | GGCGCC | 1 cut(s) | 71 |
| EheI | GGCGCC | 1 cut(s) | 71 |
| ErhI | CCWWGG | 7 cut(s) | 186, 477, 783, 1217, 1487, 1499, 3213 |
| Esp3I | CGTCTC | 1 cut(s) | 1487 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1332, 1364 |
| FaqI | GGGAC | 5 cut(s) | 198, 291, 1148, 2851, 2934 |
| FauI | CCCGC | 2 cut(s) | 83, 1264 |
| FauNDI | CATATG | 3 cut(s) | 220, 2143, 2861 |
| FbaI | TGATCA | 1 cut(s) | 913 |
| FblI | GTMKAC | 3 cut(s) | 30, 2531, 2827 |
| FriOI | GRGCYC | 2 cut(s) | 3174, 3213 |
| FspI | TGCGCA | 1 cut(s) | 2288 |
| GlaI | GCGC | 4 cut(s) | 71, 2288, 3056, 3093 |
| GsaI | CCCAGC | 2 cut(s) | 1830, 3177 |
| GsuI | CTGGAG | 2 cut(s) | 978, 2393 |
| HaeII | RGCGCY | 2 cut(s) | 73, 3095 |
| HaeIII | GGCC | 5 cut(s) | 560, 1568, 1854, 1998, 2822 |
| HapII | CCGG | 2 cut(s) | 1855, 2557 |
| HgaI | GACGC | 4 cut(s) | 123, 503, 523, 3224 |
| HhaI | GCGC | 4 cut(s) | 72, 2289, 3057, 3094 |
| Hin1I | GRCGYC | 1 cut(s) | 70 |
| Hin6I | GCGC | 4 cut(s) | 70, 2287, 3055, 3092 |
| HinP1I | GCGC | 4 cut(s) | 70, 2287, 3055, 3092 |
| HincII | GTYRAC | 1 cut(s) | 538 |
| HindII | GTYRAC | 1 cut(s) | 538 |
| HindIII | AAGCTT | 3 cut(s) | 1880, 2291, 2951 |
| HpaII | CCGG | 2 cut(s) | 1855, 2557 |
| Hpy166II | GTNNAC | 6 cut(s) | 31, 538, 605, 2255, 2532, 2828 |
| Hpy8I | GTNNAC | 6 cut(s) | 31, 538, 605, 2255, 2532, 2828 |
| Hpy99I | CGWCG | 3 cut(s) | 29, 1086, 2970 |
| HpyAV | CCTTC | 9 cut(s) | 431, 626, 1041, 1044, 1569, 2056, 2099, 2161, 2984 |
| HpyCH4III | ACNGT | 4 cut(s) | 1613, 1861, 2252, 3232 |
| HpyCH4IV | ACGT | 4 cut(s) | 319, 1081, 2965, 3043 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 91, 274, 521, 1358, 2275, 2284, 2603, 2741, 3186 |
| HpySE526I | ACGT | 4 cut(s) | 319, 1081, 2965, 3043 |
| Hsp92I | GRCGYC | 1 cut(s) | 70 |
| HspAI | GCGC | 4 cut(s) | 70, 2287, 3055, 3092 |
| KasI | GGCGCC | 1 cut(s) | 69 |
| Ksp22I | TGATCA | 1 cut(s) | 913 |
| KspI | CCGCGG | 1 cut(s) | 12 |
| LmnI | GCTCC | 5 cut(s) | 190, 330, 1357, 1781, 2859 |
| MaeII | ACGT | 4 cut(s) | 319, 1081, 2965, 3043 |
| MaeIII | GTNAC | 9 cut(s) | 135, 175, 390, 872, 1173, 1659, 1737, 2367, 2504 |
| MfeI | CAATTG | 4 cut(s) | 894, 935, 1296, 3165 |
| MflI | RGATCY | 5 cut(s) | 689, 727, 1525, 2024, 2137 |
| MhlI | GDGCHC | 4 cut(s) | 2089, 2257, 3174, 3213 |
| MlsI | TGGCCA | 2 cut(s) | 1998, 2822 |
| MluNI | TGGCCA | 2 cut(s) | 1998, 2822 |
| Mly113I | GGCGCC | 1 cut(s) | 70 |
| MlyI | GAGTC | 2 cut(s) | 220, 869 |
| MmeI | TCCRAC | 3 cut(s) | 1632, 1992, 2316 |
| Mox20I | TGGCCA | 2 cut(s) | 1998, 2822 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3160 |
| MscI | TGGCCA | 2 cut(s) | 1998, 2822 |
| MslI | CAYNNNNRTG | 4 cut(s) | 142, 206, 1199, 2805 |
| Msp20I | TGGCCA | 2 cut(s) | 1998, 2822 |
| MspA1I | CMGCKG | 7 cut(s) | 11, 377, 1259, 2222, 2452, 3152, 3177 |
| MspI | CCGG | 2 cut(s) | 1855, 2557 |
| MspR9I | CCNGG | 4 cut(s) | 396, 679, 1779, 3078 |
| MunI | CAATTG | 4 cut(s) | 894, 935, 1296, 3165 |
| MvaI | CCWGG | 4 cut(s) | 396, 679, 1779, 3078 |
| MvnI | CGCG | 2 cut(s) | 11, 534 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 91, 274, 521, 1358, 2275, 2284, 2603, 2741, 3186 |
| NarI | GGCGCC | 1 cut(s) | 70 |
| NcoI | CCATGG | 3 cut(s) | 477, 1487, 3213 |
| NdeI | CATATG | 3 cut(s) | 220, 2143, 2861 |
| NlaIV | GGNNCC | 7 cut(s) | 71, 418, 1497, 2086, 2270, 2867, 2922 |
| NmuCI | GTSAC | 6 cut(s) | 135, 390, 872, 1173, 2367, 2504 |
| NsbI | TGCGCA | 1 cut(s) | 2288 |
| NspI | RCATGY | 3 cut(s) | 1376, 1898, 2834 |
| NspV | TTCGAA | 2 cut(s) | 1425, 1531 |
| OliI | CACNNNNGTG | 1 cut(s) | 142 |
| PaeI | GCATGC | 1 cut(s) | 1898 |
| PagI | TCATGA | 1 cut(s) | 2424 |
| PceI | AGGCCT | 1 cut(s) | 560 |
| PciI | ACATGT | 1 cut(s) | 2830 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3160 |
| PfoI | TCCNGGA | 1 cut(s) | 1777 |
| PleI | GAGTC | 2 cut(s) | 219, 869 |
| PluTI | GGCGCC | 1 cut(s) | 73 |
| PpsI | GAGTC | 2 cut(s) | 219, 869 |
| Ppu21I | YACGTR | 1 cut(s) | 3044 |
| PpuMI | RGGWCCY | 1 cut(s) | 2921 |
| PscI | ACATGT | 1 cut(s) | 2830 |
| PshBI | ATTAAT | 2 cut(s) | 1437, 2973 |
| PsiI | TTATAA | 1 cut(s) | 765 |
| Psp1406I | AACGTT | 1 cut(s) | 319 |
| Psp5II | RGGWCCY | 1 cut(s) | 2921 |
| Psp6I | CCWGG | 4 cut(s) | 394, 677, 1777, 3076 |
| PspEI | GGTNACC | 1 cut(s) | 390 |
| PspFI | CCCAGC | 2 cut(s) | 1826, 3173 |
| PspGI | CCWGG | 4 cut(s) | 394, 677, 1777, 3076 |
| PspN4I | GGNNCC | 7 cut(s) | 71, 418, 1497, 2086, 2270, 2867, 2922 |
| PspPI | GGNCC | 7 cut(s) | 474, 675, 1237, 1813, 2865, 2921, 3287 |
| PspPPI | RGGWCCY | 1 cut(s) | 2921 |
| PstI | CTGCAG | 2 cut(s) | 757, 2749 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2222, 2371 |
| PsuI | RGATCY | 5 cut(s) | 689, 727, 1525, 2024, 2137 |
| PvuII | CAGCTG | 5 cut(s) | 377, 2222, 2452, 3152, 3177 |
| RsaI | GTAC | 8 cut(s) | 932, 1193, 1398, 2773, 3033, 3046, 3261, 3314 |
| RsaNI | GTAC | 8 cut(s) | 931, 1192, 1397, 2772, 3032, 3045, 3260, 3313 |
| RseI | CAYNNNNRTG | 4 cut(s) | 142, 206, 1199, 2805 |
| SacII | CCGCGG | 1 cut(s) | 12 |
| Sau96I | GGNCC | 7 cut(s) | 474, 675, 1237, 1813, 2865, 2921, 3287 |
| ScaI | AGTACT | 1 cut(s) | 3261 |
| SchI | GAGTC | 2 cut(s) | 220, 869 |
| ScrFI | CCNGG | 4 cut(s) | 396, 679, 1779, 3078 |
| SduI | GDGCHC | 4 cut(s) | 2089, 2257, 3174, 3213 |
| SfcI | CTRYAG | 5 cut(s) | 585, 753, 2598, 2745, 3255 |
| SfoI | GGCGCC | 1 cut(s) | 71 |
| Sfr303I | CCGCGG | 1 cut(s) | 12 |
| SfuI | TTCGAA | 2 cut(s) | 1425, 1531 |
| SgrBI | CCGCGG | 1 cut(s) | 12 |
| SinI | GGWCC | 7 cut(s) | 474, 675, 1237, 1813, 2865, 2921, 3287 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 142, 206, 1199, 2805 |
| SmlI | CTYRAG | 1 cut(s) | 2393 |
| SmoI | CTYRAG | 1 cut(s) | 2393 |
| SnaBI | TACGTA | 1 cut(s) | 3044 |
| SphI | GCATGC | 1 cut(s) | 1898 |
| SseBI | AGGCCT | 1 cut(s) | 560 |
| SsiI | CCGC | 8 cut(s) | 9, 11, 67, 76, 1257, 2263, 2549, 3104 |
| SspDI | GGCGCC | 1 cut(s) | 69 |
| SspI | AATATT | 3 cut(s) | 1368, 1762, 2419 |
| StuI | AGGCCT | 1 cut(s) | 560 |
| StyD4I | CCNGG | 4 cut(s) | 394, 677, 1777, 3076 |
| StyI | CCWWGG | 7 cut(s) | 186, 477, 783, 1217, 1487, 1499, 3213 |
| TaaI | ACNGT | 4 cut(s) | 1613, 1861, 2252, 3232 |
| TaiI | ACGT | 4 cut(s) | 322, 1084, 2968, 3046 |
| TaqI | TCGA | 6 cut(s) | 999, 1084, 1425, 1531, 1843, 2968 |
| TatI | WGTACW | 5 cut(s) | 1191, 1396, 2771, 3259, 3312 |
| TauI | GCSGC | 3 cut(s) | 11, 70, 3107 |
| TscAI | CASTG | 5 cut(s) | 476, 2257, 2376, 2689, 3237 |
| TseFI | GTSAC | 6 cut(s) | 135, 390, 872, 1173, 2367, 2504 |
| Tsp45I | GTSAC | 6 cut(s) | 135, 390, 872, 1173, 2367, 2504 |
| TspRI | CASTG | 5 cut(s) | 476, 2257, 2376, 2689, 3237 |
| VneI | GTGCAC | 1 cut(s) | 2253 |
| VpaK11BI | GGWCC | 7 cut(s) | 474, 675, 1237, 1813, 2865, 2921, 3287 |
| VspI | ATTAAT | 2 cut(s) | 1437, 2973 |
| XbaI | TCTAGA | 4 cut(s) | 499, 742, 1694, 2234 |
| XceI | RCATGY | 3 cut(s) | 1376, 1898, 2834 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 669 |
| XmaJI | CCTAGG | 1 cut(s) | 1499 |
| XmiI | GTMKAC | 3 cut(s) | 30, 2531, 2827 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3160 |
| ZrmI | AGTACT | 1 cut(s) | 3261 |