Ubiquitin-fold modifier
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77710 |
| fragaria_vesca | FvH4_2g26390 |
| malus_domestica | MD08G1169400.v1.1 MD15G1356000.v1.1 |
| prunus_persica | Prupe.1G503300_v2.0.a1 Prupe.1G503300_v2.0.a1 |
| pyrus_communis | pycom08g14480 pycom15g31800 |
| rosa_chinensis | RchiOBHm_Chr6g0294951 |
| rosa_multiflora | Rmu_sc0002700.1_g000040 |
| rosa_roxburghii | Rroxscaffold_7G00172800 |
| rosa_rugosa | Rorug06G0248600 Rorug06G0248800 |
| rosa_samantha | Rh6AG361800 Rh6BG369300 Rh6CG375800 Rh6DG362300 |
| rosa_wichuraiana | Rw6G031560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 5, 99 |
| AclWI | GGATC | 1 cut(s) | 41 |
| AcsI | RAATTY | 1 cut(s) | 125 |
| AcuI | CTGAAG | 1 cut(s) | 141 |
| AfeI | AGCGCT | 1 cut(s) | 151 |
| AgsI | TTSAA | 3 cut(s) | 28, 64, 130 |
| AluBI | AGCT | 2 cut(s) | 55, 119 |
| AluI | AGCT | 2 cut(s) | 55, 119 |
| AlwI | GGATC | 1 cut(s) | 41 |
| Ama87I | CYCGRG | 1 cut(s) | 243 |
| Aor51HI | AGCGCT | 1 cut(s) | 151 |
| ApeKI | GCWGC | 2 cut(s) | 86, 116 |
| ApoI | RAATTY | 1 cut(s) | 125 |
| AspLEI | GCGC | 1 cut(s) | 152 |
| AsuHPI | GGTGA | 2 cut(s) | 88, 151 |
| AvaI | CYCGRG | 1 cut(s) | 243 |
| AxyI | CCTNAGG | 1 cut(s) | 81 |
| BbvCI | CCTCAGC | 1 cut(s) | 186 |
| BbvI | GCAGC | 2 cut(s) | 98, 128 |
| BccI | CCATC | 2 cut(s) | 161, 295 |
| BceAI | ACGGC | 1 cut(s) | 86 |
| BfoI | RGCGCY | 1 cut(s) | 153 |
| BisI | GCNGC | 2 cut(s) | 87, 117 |
| BlsI | GCNGC | 2 cut(s) | 88, 118 |
| BmeT110I | CYCGRG | 1 cut(s) | 243 |
| BmiI | GGNNCC | 1 cut(s) | 223 |
| Bpu10I | CCTNAGC | 1 cut(s) | 186 |
| BpuEI | CTTGAG | 1 cut(s) | 197 |
| Bse21I | CCTNAGG | 1 cut(s) | 81 |
| Bse3DI | GCAATG | 1 cut(s) | 208 |
| BseMI | GCAATG | 1 cut(s) | 208 |
| BseMII | CTCAG | 2 cut(s) | 72, 200 |
| BseXI | GCAGC | 2 cut(s) | 98, 128 |
| BsgI | GTGCAG | 1 cut(s) | 216 |
| BsiHKCI | CYCGRG | 1 cut(s) | 243 |
| BslFI | GGGAC | 1 cut(s) | 280 |
| BsmFI | GGGAC | 1 cut(s) | 280 |
| BsoBI | CYCGRG | 1 cut(s) | 243 |
| Bsp143I | GATC | 1 cut(s) | 46 |
| BspACI | CCGC | 2 cut(s) | 5, 99 |
| BspCNI | CTCAG | 2 cut(s) | 73, 199 |
| BspLI | GGNNCC | 1 cut(s) | 223 |
| BspPI | GGATC | 1 cut(s) | 41 |
| BsrDI | GCAATG | 1 cut(s) | 208 |
| BssMI | GATC | 1 cut(s) | 46 |
| BstC8I | GCNNGC | 1 cut(s) | 199 |
| BstDEI | CTNAG | 2 cut(s) | 81, 186 |
| BstH2I | RGCGCY | 1 cut(s) | 153 |
| BstHHI | GCGC | 1 cut(s) | 152 |
| BstKTI | GATC | 1 cut(s) | 49 |
| BstMBI | GATC | 1 cut(s) | 46 |
| BstV1I | GCAGC | 2 cut(s) | 98, 128 |
| Bsu36I | CCTNAGG | 1 cut(s) | 81 |
| Cac8I | GCNNGC | 1 cut(s) | 199 |
| CfoI | GCGC | 1 cut(s) | 152 |
| CviAII | CATG | 1 cut(s) | 218 |
| CviJI | RGCY | 4 cut(s) | 55, 89, 119, 260 |
| CviKI_1 | RGCY | 4 cut(s) | 55, 89, 119, 260 |
| DdeI | CTNAG | 2 cut(s) | 81, 186 |
| DpnI | GATC | 1 cut(s) | 48 |
| DpnII | GATC | 1 cut(s) | 46 |
| Eco47III | AGCGCT | 1 cut(s) | 151 |
| Eco57I | CTGAAG | 1 cut(s) | 141 |
| Eco81I | CCTNAGG | 1 cut(s) | 81 |
| Eco88I | CYCGRG | 1 cut(s) | 243 |
| EcoRI | GAATTC | 1 cut(s) | 125 |
| FaeI | CATG | 1 cut(s) | 221 |
| FaiI | YATR | 2 cut(s) | 219, 278 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 8, 40, 44, 76 |
| FaqI | GGGAC | 1 cut(s) | 280 |
| FatI | CATG | 1 cut(s) | 217 |
| Fnu4HI | GCNGC | 2 cut(s) | 87, 117 |
| Fsp4HI | GCNGC | 2 cut(s) | 87, 117 |
| GlaI | GCGC | 1 cut(s) | 151 |
| GluI | GCNGC | 2 cut(s) | 87, 117 |
| HaeII | RGCGCY | 1 cut(s) | 153 |
| HhaI | GCGC | 1 cut(s) | 152 |
| Hin1II | CATG | 1 cut(s) | 221 |
| Hin6I | GCGC | 1 cut(s) | 150 |
| HinP1I | GCGC | 1 cut(s) | 150 |
| HinfI | GANTC | 2 cut(s) | 177, 238 |
| HphI | GGTGA | 2 cut(s) | 88, 151 |
| Hpy188I | TCNGA | 3 cut(s) | 46, 108, 226 |
| Hpy188III | TCNNGA | 2 cut(s) | 80, 245 |
| HpyAV | CCTTC | 2 cut(s) | 34, 70 |
| HpyCH4V | TGCA | 1 cut(s) | 197 |
| HpyF3I | CTNAG | 2 cut(s) | 81, 186 |
| Hsp92II | CATG | 1 cut(s) | 221 |
| HspAI | GCGC | 1 cut(s) | 150 |
| Kzo9I | GATC | 1 cut(s) | 46 |
| LmnI | GCTCC | 1 cut(s) | 60 |
| LpnPI | CCDG | 4 cut(s) | 93, 160, 183, 248 |
| Lsp1109I | GCAGC | 2 cut(s) | 98, 128 |
| MaeIII | GTNAC | 1 cut(s) | 31 |
| MalI | GATC | 1 cut(s) | 48 |
| MboI | GATC | 1 cut(s) | 46 |
| MboII | GAAGA | 1 cut(s) | 134 |
| MluCI | AATT | 1 cut(s) | 125 |
| MmeI | TCCRAC | 1 cut(s) | 154 |
| MnlI | CCTC | 6 cut(s) | 52, 76, 147, 195, 221, 252 |
| MspA1I | CMGCKG | 1 cut(s) | 119 |
| NdeII | GATC | 1 cut(s) | 46 |
| NlaIII | CATG | 1 cut(s) | 221 |
| NlaIV | GGNNCC | 1 cut(s) | 223 |
| NmuCI | GTSAC | 1 cut(s) | 31 |
| PaeR7I | CTCGAG | 1 cut(s) | 243 |
| PfeI | GAWTC | 2 cut(s) | 177, 238 |
| PkrI | GCNGC | 2 cut(s) | 88, 118 |
| PspN4I | GGNNCC | 1 cut(s) | 223 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 60, 92 |
| PvuII | CAGCTG | 1 cut(s) | 119 |
| SatI | GCNGC | 2 cut(s) | 87, 117 |
| Sau3AI | GATC | 1 cut(s) | 46 |
| SetI | ASST | 4 cut(s) | 21, 44, 57, 121 |
| Sfr274I | CTCGAG | 1 cut(s) | 243 |
| SgeI | CNNG | 9 cut(s) | 18, 92, 159, 210, 226, 230, 247, 255, 257 |
| SlaI | CTCGAG | 1 cut(s) | 243 |
| SmlI | CTYRAG | 2 cut(s) | 212, 243 |
| SmoI | CTYRAG | 2 cut(s) | 212, 243 |
| Sse9I | AATT | 1 cut(s) | 125 |
| SsiI | CCGC | 2 cut(s) | 5, 99 |
| TaqI | TCGA | 1 cut(s) | 244 |
| TasI | AATT | 1 cut(s) | 125 |
| TfiI | GAWTC | 2 cut(s) | 177, 238 |
| TseFI | GTSAC | 1 cut(s) | 31 |
| TseI | GCWGC | 2 cut(s) | 86, 116 |
| Tsp45I | GTSAC | 1 cut(s) | 31 |
| XapI | RAATTY | 1 cut(s) | 125 |
| XhoI | CTCGAG | 1 cut(s) | 243 |