Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0008279

Physical Location & Seq

Genomic Coordinates Forward (+)

41626433 .. 41631302

Gene Structure 4870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G503400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGGGAATGAAGGCCAAGCCTCACCACCACCACCACTACAATGGCAATGGCGGTGTTGGTGGAGGTGGGAACGGCAGCGAGAGCAGCAGCAGCACATCACCCAGCCCACCACCGTCACCCCGCCGACACTCCAGCACACTCTCCCACTGCCGCCGGAAGTTCCGGTCCAAACCCATCTCCGTCGTCGCCGGATTTCTTCTCCTCCGCCGATTCCTTCGGTTACTGGTGGTGCTGCCTCTGCTCTACGTCTCTGGGCTTATCATGTGTGTCGGCCCGTTCTCTGGTCTGGTGGGCCATACCCCTCTTCCCGGTTCTGTGTACCGTAGTCACGAAATGTTTGAGCTGCTCTGGCCTCACATTCAGGCTGATAATTCCACCCCAATTGAGTTGTCTTCTGTGTGGAGATACAGAAGAAAGCTGAAAGAGCAGAAGCCATGCCCGCCTTCGACTGCTGGACTACAGTTAGAGTCCCCTGGCCCTAGTGTTTACTTGATTGTGGAGGTTAATGGTGGTCTTAACCAACAACGCTCTGCGATTTGCAATGCCGTGGCTCTTGCTGGACTCTTGAATGCAATTCTCGTTATTCCTAACTTTGAATTTCATAATGTTTGGAGGGATCCAAGCACTTTTGGTGATATATATGATGAAGATCATTTCATAGCCGCCCTTGAAGGCCATGTTAAAGTGGTTAAAGAGCTACCTGAGATGGTATTGGAGAGATATGATCACAGCATCGCTAACATACCAACCCTTCGTGTCCAAGCTTGGGCTCCTGTCCGTTATTACAAAGGAGAAGTTTATCCTATCCTGCAGAGGCAGGGGGTAATCCGCATAGCTCCATTTGCTAATAGATTAGCAATGAATGTCCCACCTTCTATTCAGCATTTAAGATGCCTTGCTAATTATGAAGCATTGAAGTTCTCTTCTCCCATATCAAATTTGGCAAGGAAACTAGTTGAACGAATGACTGAGATGAGTTCAAGGACTGGTGGAAAGTATGTTTCAATCCACCTCCGTTTTGAGGAGGACATGGTGGCATTCTCATGTTGTTTGTATGATGGGGGAGAGGCTGAAAATAGTGAAATGAATTCAATTCGACAAAAAGGATGGGGAGATAAGTTCAAACGAAAAGGCCGTGTAACTCTGCCTGGTCTCAATCGGATTGATGGAAAATGCCCACTAACCCCTTTGGAGGTTGGAATGATGCTGCGGGGTATGGGGTTTGATAATAGCACTTCAATTTATTTAGCCTCAGGAAAAATCTACTGGGCAGAGAAACATTTAGCCCCTCTGGTAAAGATGTTTCCCTATCTGCATACAAAGGAGTCTCTTGCAACACCAGATGAGCTTGCTCCTTTTAAGGGATATTCTTCGAGATTGGCAGCTTTGGATTATACAGTATGCTTGTCTAGTGAGGTTTTTGTAACAACACAGGGTGGGAACTTCCCACATTTCCTAATGGGTCATCGGAGATTCCTTAATGGTGGACATGCCAAGACCATTATACCTGATAAGCGCAAGCTTGTTGTTTTACTGCATGACATGAGTATCAGCTGGAAAGATTTCAAACTTGAGATGGAAGCAATGCTCACGGAAAGTGACCGCAAGGGAAAGATAATACCTAGAGTGAAAAAATTCACCAAAAAATCTTCTGTATACAGCTACCCTTTGCCAGATTGTGGGTGTCTCCAAAAACACAATAGCACTCGGATTGACCCATCTGCACATTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

O-FucT

Protein Analysis

578

Amino Acids

64.53

Weight (kDa)

9.51

Isoelectric Point (pI)

45.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008279)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G38065 AT1G38065 AT1G38131
fragaria_vesca	FvH4_2g26360 FvH4_2g26360 FvH4_2g26360 FvH4_2g26360
malus_domestica	MD08G1169500.v1.1 MD15G1356100.v1.1
prunus_persica	Prupe.1G503400_v2.0.a1 Prupe.1G503400_v2.0.a1
pyrus_communis	pycom08g14500 pycom15g31810
rosa_chinensis	RchiOBHm_Chr6g0294941
rosa_multiflora	Rmu_sc0025906.1_g000001 Rmu_sc0025907.1_g000001
rosa_roxburghii	Rroxscaffold_7G00172810
rosa_rugosa	Rorug06G0248500
rosa_samantha	Rh6AG361700 Rh6BG369200 Rh6CG375700 Rh6DG362200
rosa_wichuraiana	Rw6G031550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1679
AccI	GTMKAC	1 cut(s)	1656
AciI	CCGC	9 cut(s)	51, 121, 151, 205, 440, 663, 829, 1210, 1603
AclWI	GGATC	2 cut(s)	611, 624
AcsI	RAATTY	4 cut(s)	596, 937, 1087, 1634
AdeI	CACNNNGTG	1 cut(s)	1436
AfaI	GTAC	1 cut(s)	320
AfiI	CCNNNNNNNGG	7 cut(s)	281, 308, 766, 1021, 1192, 1361, 1679
AhlI	ACTAGT	1 cut(s)	952
AjnI	CCWGG	2 cut(s)	472, 1147
Alw26I	GTCTC	4 cut(s)	253, 1157, 1332, 1691
AlwI	GGATC	2 cut(s)	611, 624
AoxI	GGCC	7 cut(s)	12, 271, 292, 350, 475, 673, 1132
ApeKI	GCWGC	8 cut(s)	75, 84, 87, 90, 232, 343, 1207, 1382
ApoI	RAATTY	4 cut(s)	596, 937, 1087, 1634
Asp700I	GAANNNNTTC	2 cut(s)	1562, 1634
AspLEI	GCGC	1 cut(s)	1518
AspS9I	GGNCC	4 cut(s)	165, 272, 292, 476
AsuC2I	CCSGG	1 cut(s)	309
AsuHPI	GGTGA	5 cut(s)	14, 90, 108, 644, 1630
AvaII	GGWCC	1 cut(s)	165
AxyI	CCTNAGG	1 cut(s)	1252
BaeI	ACNNNNGTAYC	2 cut(s)	1531, 1564
BamHI	GGATCC	1 cut(s)	616
BanII	GRGCYC	1 cut(s)	772
BbsI	GAAGAC	1 cut(s)	384
BbvI	GCAGC	8 cut(s)	87, 96, 99, 102, 219, 330, 1194, 1394
BccI	CCATC	7 cut(s)	182, 700, 1052, 1101, 1160, 1570, 1726
BceAI	ACGGC	3 cut(s)	88, 530, 1119
BciT130I	CCWGG	2 cut(s)	474, 1149
BclI	TGATCA	1 cut(s)	724
BcnI	CCSGG	1 cut(s)	309
BcoDI	GTCTC	4 cut(s)	253, 1157, 1332, 1691
BcuI	ACTAGT	1 cut(s)	952
BfaI	CTAG	4 cut(s)	480, 953, 1410, 1623
BfmI	CTRYAG	2 cut(s)	458, 809
Bme1390I	CCNGG	3 cut(s)	309, 474, 1149
Bme18I	GGWCC	1 cut(s)	165
BmgT120I	GGNCC	4 cut(s)	165, 272, 292, 476
BmiI	GGNNCC	2 cut(s)	618, 771
BmrFI	CCNGG	3 cut(s)	309, 474, 1149
BmrI	ACTGGG	1 cut(s)	1276
BmsI	GCATC	3 cut(s)	741, 881, 1194
BmuI	ACTGGG	1 cut(s)	1276
BpiI	GAAGAC	1 cut(s)	384
BpmI	CTGGAG	1 cut(s)	115
BpuEI	CTTGAG	1 cut(s)	1592
BpuMI	CCSGG	1 cut(s)	309
BsaBI	GATNNNNATC	1 cut(s)	648
BsaI	GGTCTC	1 cut(s)	1157
BsaJI	CCNNGG	2 cut(s)	472, 546
BsaWI	WCCGGW	1 cut(s)	162
Bsc4I	CCNNNNNNNGG	7 cut(s)	281, 308, 766, 1021, 1192, 1361, 1679
Bse1I	ACTGG	3 cut(s)	228, 991, 1271
Bse21I	CCTNAGG	1 cut(s)	1252
Bse3DI	GCAATG	4 cut(s)	52, 547, 864, 1590
Bse8I	GATNNNNATC	1 cut(s)	648
BseBI	CCWGG	2 cut(s)	474, 1149
BseDI	CCNNGG	2 cut(s)	472, 546
BseGI	GGATG	1 cut(s)	1112
BseJI	GATNNNNATC	1 cut(s)	648
BseLI	CCNNNNNNNGG	7 cut(s)	281, 308, 766, 1021, 1192, 1361, 1679
BseMI	GCAATG	4 cut(s)	52, 547, 864, 1590
BseMII	CTCAG	3 cut(s)	693, 960, 1266
BseNI	ACTGG	3 cut(s)	228, 991, 1271
BseRI	GAGGAG	2 cut(s)	191, 1037
BseXI	GCAGC	8 cut(s)	87, 96, 99, 102, 219, 330, 1194, 1394
BseYI	CCCAGC	1 cut(s)	101
BsgI	GTGCAG	1 cut(s)	1707
BshFI	GGCC	7 cut(s)	14, 273, 294, 352, 477, 675, 1134
BsiSI	CCGG	4 cut(s)	154, 163, 189, 309
BslFI	GGGAC	2 cut(s)	454, 851
BslI	CCNNNNNNNGG	7 cut(s)	281, 308, 766, 1021, 1192, 1361, 1679
BsmAI	GTCTC	4 cut(s)	253, 1157, 1332, 1691
BsmBI	CGTCTC	1 cut(s)	253
BsmFI	GGGAC	2 cut(s)	454, 851
BsmI	GAATGC	2 cut(s)	574, 1037
BsnI	GGCC	7 cut(s)	14, 273, 294, 352, 477, 675, 1134
Bso31I	GGTCTC	1 cut(s)	1157
Bsp1286I	GDGCHC	1 cut(s)	772
Bsp143I	GATC	3 cut(s)	616, 649, 724
BspACI	CCGC	9 cut(s)	51, 121, 151, 205, 440, 663, 829, 1210, 1603
BspANI	GGCC	7 cut(s)	14, 273, 294, 352, 477, 675, 1134
BspCNI	CTCAG	3 cut(s)	694, 961, 1265
BspLI	GGNNCC	2 cut(s)	618, 771
BspMAI	CTGCAG	1 cut(s)	813
BspPI	GGATC	2 cut(s)	611, 624
BspTNI	GGTCTC	1 cut(s)	1157
BsrDI	GCAATG	4 cut(s)	52, 547, 864, 1590
BsrI	ACTGG	3 cut(s)	228, 991, 1271
BssECI	CCNNGG	2 cut(s)	472, 546
BssMI	GATC	3 cut(s)	616, 649, 724
BssNAI	GTATAC	1 cut(s)	1657
Bst1107I	GTATAC	1 cut(s)	1657
Bst2UI	CCWGG	2 cut(s)	474, 1149
Bst4CI	ACNGT	4 cut(s)	114, 323, 462, 1399
Bst6I	CTCTTC	2 cut(s)	309, 928
BstC8I	GCNNGC	3 cut(s)	440, 1350, 1520
BstDEI	CTNAG	3 cut(s)	702, 969, 1252
BstDSI	CCRYGG	1 cut(s)	546
BstF5I	GGATG	1 cut(s)	1112
BstHHI	GCGC	1 cut(s)	1518
BstKTI	GATC	3 cut(s)	619, 652, 727
BstMAI	GTCTC	4 cut(s)	253, 1157, 1332, 1691
BstMBI	GATC	3 cut(s)	616, 649, 724
BstMWI	GCNNNNNNNGC	8 cut(s)	81, 84, 90, 238, 349, 424, 439, 842
BstNI	CCWGG	2 cut(s)	474, 1149
BstNSI	RCATGY	1 cut(s)	1493
BstSCI	CCNGG	3 cut(s)	307, 472, 1147
BstSFI	CTRYAG	2 cut(s)	458, 809
BstV1I	GCAGC	8 cut(s)	87, 96, 99, 102, 219, 330, 1194, 1394
BstV2I	GAAGAC	1 cut(s)	384
BstX2I	RGATCY	1 cut(s)	616
BstXI	CCANNNNNNTGG	1 cut(s)	41
BstYI	RGATCY	1 cut(s)	616
BstZ17I	GTATAC	1 cut(s)	1657
Bsu36I	CCTNAGG	1 cut(s)	1252
BsuRI	GGCC	7 cut(s)	14, 273, 294, 352, 477, 675, 1134
BtgI	CCRYGG	1 cut(s)	546
BtgZI	GCGATG	1 cut(s)	718
BtsCI	GGATG	1 cut(s)	1112
BtsI	GCAGTG	1 cut(s)	145
BtsIMutI	CAGTG	1 cut(s)	145
Cac8I	GCNNGC	3 cut(s)	440, 1350, 1520
CfoI	GCGC	1 cut(s)	1518
Cfr13I	GGNCC	4 cut(s)	165, 272, 292, 476
Csp6I	GTAC	1 cut(s)	319
CspCI	CAANNNNNGTGG	2 cut(s)	364, 399
CviAII	CATG	8 cut(s)	262, 435, 677, 1030, 1044, 1490, 1538, 1543
CviQI	GTAC	1 cut(s)	319
DdeI	CTNAG	3 cut(s)	702, 969, 1252
DpnI	GATC	3 cut(s)	618, 651, 726
DpnII	GATC	3 cut(s)	616, 649, 724
DraIII	CACNNNGTG	1 cut(s)	1436
Eam1104I	CTCTTC	2 cut(s)	309, 928
EarI	CTCTTC	2 cut(s)	309, 928
EciI	GGCGGA	1 cut(s)	194
Eco24I	GRGCYC	1 cut(s)	772
Eco31I	GGTCTC	1 cut(s)	1157
Eco47I	GGWCC	1 cut(s)	165
Eco81I	CCTNAGG	1 cut(s)	1252
EcoRI	GAATTC	1 cut(s)	1087
EcoRII	CCWGG	2 cut(s)	472, 1147
EcoT38I	GRGCYC	1 cut(s)	772
Esp3I	CGTCTC	1 cut(s)	253
FaeI	CATG	8 cut(s)	265, 438, 680, 1033, 1047, 1493, 1541, 1546
FaqI	GGGAC	2 cut(s)	454, 851
FatI	CATG	8 cut(s)	261, 434, 676, 1029, 1043, 1489, 1537, 1542
FauI	CCCGC	3 cut(s)	128, 447, 1203
FbaI	TGATCA	1 cut(s)	724
FblI	GTMKAC	1 cut(s)	1656
FokI	GGATG	1 cut(s)	1119
FriOI	GRGCYC	1 cut(s)	772
FspBI	CTAG	4 cut(s)	480, 953, 1410, 1623
GlaI	GCGC	1 cut(s)	1517
GsaI	CCCAGC	1 cut(s)	105
GsuI	CTGGAG	1 cut(s)	115
HaeIII	GGCC	7 cut(s)	14, 273, 294, 352, 477, 675, 1134
HapII	CCGG	4 cut(s)	154, 163, 189, 309
HhaI	GCGC	1 cut(s)	1518
Hin1II	CATG	8 cut(s)	265, 438, 680, 1033, 1047, 1493, 1541, 1546
Hin6I	GCGC	1 cut(s)	1516
HinP1I	GCGC	1 cut(s)	1516
HindIII	AAGCTT	2 cut(s)	762, 1520
HinfI	GANTC	5 cut(s)	210, 467, 561, 1325, 1473
HpaII	CCGG	4 cut(s)	154, 163, 189, 309
HphI	GGTGA	5 cut(s)	14, 90, 108, 644, 1630
Hpy166II	GTNNAC	4 cut(s)	319, 487, 1487, 1657
Hpy188I	TCNGA	3 cut(s)	1161, 1470, 1710
Hpy188III	TCNNGA	5 cut(s)	329, 565, 1254, 1374, 1731
Hpy8I	GTNNAC	4 cut(s)	319, 487, 1487, 1657
Hpy99I	CGWCG	2 cut(s)	185, 188
HpyAV	CCTTC	6 cut(s)	4, 224, 453, 665, 761, 882
HpyCH4III	ACNGT	4 cut(s)	114, 323, 462, 1399
HpyCH4IV	ACGT	1 cut(s)	246
HpyCH4V	TGCA	7 cut(s)	540, 572, 811, 1315, 1334, 1537, 1724
HpyF10VI	GCNNNNNNNGC	8 cut(s)	81, 84, 90, 238, 349, 424, 439, 842
HpyF3I	CTNAG	3 cut(s)	702, 969, 1252
HpySE526I	ACGT	1 cut(s)	246
Hsp92II	CATG	8 cut(s)	265, 438, 680, 1033, 1047, 1493, 1541, 1546
HspAI	GCGC	1 cut(s)	1516
Ksp22I	TGATCA	1 cut(s)	724
Kzo9I	GATC	3 cut(s)	616, 649, 724
LmnI	GCTCC	3 cut(s)	775, 841, 1357
Lsp1109I	GCAGC	8 cut(s)	87, 96, 99, 102, 219, 330, 1194, 1394
LweI	GCATC	3 cut(s)	741, 881, 1194
MaeI	CTAG	4 cut(s)	480, 953, 1410, 1623
MaeII	ACGT	1 cut(s)	246
MaeIII	GTNAC	6 cut(s)	114, 219, 326, 1138, 1423, 1598
MalI	GATC	3 cut(s)	618, 651, 726
MboI	GATC	3 cut(s)	616, 649, 724
MboII	GAAGA	8 cut(s)	188, 296, 384, 423, 659, 915, 1362, 1641
MfeI	CAATTG	1 cut(s)	381
MflI	RGATCY	1 cut(s)	616
MhlI	GDGCHC	1 cut(s)	772
MlyI	GAGTC	3 cut(s)	476, 555, 1334
MmeI	TCCRAC	1 cut(s)	1177
MroXI	GAANNNNTTC	2 cut(s)	1562, 1634
MseI	TTAA	7 cut(s)	504, 516, 681, 690, 887, 1359, 1479
MslI	CAYNNNNRTG	2 cut(s)	39, 1042
MspA1I	CMGCKG	1 cut(s)	1554
MspI	CCGG	4 cut(s)	154, 163, 189, 309
MspR9I	CCNGG	3 cut(s)	309, 474, 1149
MunI	CAATTG	1 cut(s)	381
Mva1269I	GAATGC	2 cut(s)	574, 1037
MvaI	CCWGG	2 cut(s)	474, 1149
MwoI	GCNNNNNNNGC	8 cut(s)	81, 84, 90, 238, 349, 424, 439, 842
NciI	CCSGG	1 cut(s)	309
NdeII	GATC	3 cut(s)	616, 649, 724
NlaIII	CATG	8 cut(s)	265, 438, 680, 1033, 1047, 1493, 1541, 1546
NlaIV	GGNNCC	2 cut(s)	618, 771
NmuCI	GTSAC	3 cut(s)	114, 326, 1598
NspI	RCATGY	1 cut(s)	1493
PcsI	WCGNNNNNNNCGW	1 cut(s)	1132
PctI	GAATGC	2 cut(s)	574, 1037
PdmI	GAANNNNTTC	2 cut(s)	1562, 1634
PfeI	GAWTC	2 cut(s)	210, 1473
PflMI	CCANNNNNTGG	1 cut(s)	1679
PleI	GAGTC	3 cut(s)	475, 555, 1333
PpsI	GAGTC	3 cut(s)	475, 555, 1333
Psp6I	CCWGG	2 cut(s)	472, 1147
PspFI	CCCAGC	1 cut(s)	101
PspGI	CCWGG	2 cut(s)	472, 1147
PspN4I	GGNNCC	2 cut(s)	618, 771
PspPI	GGNCC	4 cut(s)	165, 272, 292, 476
PstI	CTGCAG	1 cut(s)	813
PsuI	RGATCY	1 cut(s)	616
PvuII	CAGCTG	1 cut(s)	1554
RsaI	GTAC	1 cut(s)	320
RsaNI	GTAC	1 cut(s)	319
RseI	CAYNNNNRTG	2 cut(s)	39, 1042
SaqAI	TTAA	7 cut(s)	504, 516, 681, 690, 887, 1359, 1479
Sau3AI	GATC	3 cut(s)	616, 649, 724
Sau96I	GGNCC	4 cut(s)	165, 272, 292, 476
SchI	GAGTC	3 cut(s)	476, 555, 1334
ScrFI	CCNGG	3 cut(s)	309, 474, 1149
SduI	GDGCHC	1 cut(s)	772
SfaNI	GCATC	3 cut(s)	741, 881, 1194
SfcI	CTRYAG	2 cut(s)	458, 809
SinI	GGWCC	1 cut(s)	165
SmiMI	CAYNNNNRTG	2 cut(s)	39, 1042
SmlI	CTYRAG	1 cut(s)	1571
SmoI	CTYRAG	1 cut(s)	1571
SpeI	ACTAGT	1 cut(s)	952
SsiI	CCGC	9 cut(s)	51, 121, 151, 205, 440, 663, 829, 1210, 1603
SspMI	CTAG	4 cut(s)	480, 953, 1410, 1623
StyD4I	CCNGG	3 cut(s)	307, 472, 1147
TaaI	ACNGT	4 cut(s)	114, 323, 462, 1399
TaiI	ACGT	1 cut(s)	249
TaqI	TCGA	3 cut(s)	446, 1096, 1373
TauI	GCSGC	2 cut(s)	153, 665
TfiI	GAWTC	2 cut(s)	210, 1473
Tru1I	TTAA	7 cut(s)	504, 516, 681, 690, 887, 1359, 1479
Tru9I	TTAA	7 cut(s)	504, 516, 681, 690, 887, 1359, 1479
TscAI	CASTG	1 cut(s)	152
TseFI	GTSAC	3 cut(s)	114, 326, 1598
TseI	GCWGC	8 cut(s)	75, 84, 87, 90, 232, 343, 1207, 1382
Tsp45I	GTSAC	3 cut(s)	114, 326, 1598
TspDTI	ATGAA	7 cut(s)	23, 590, 646, 660, 875, 921, 1100
TspGWI	ACGGA	4 cut(s)	169, 767, 1004, 1607
TspRI	CASTG	1 cut(s)	152
Van91I	CCANNNNNTGG	1 cut(s)	1679
VpaK11BI	GGWCC	1 cut(s)	165
XapI	RAATTY	4 cut(s)	596, 937, 1087, 1634
XceI	RCATGY	1 cut(s)	1493
XcmI	CCANNNNNNNNNTGG	2 cut(s)	38, 937
XmiI	GTMKAC	1 cut(s)	1656
XmnI	GAANNNNTTC	2 cut(s)	1562, 1634
XspI	CTAG	4 cut(s)	480, 953, 1410, 1623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.