Prupe.1G507800_v2.0.a1
NAC Family

Inactive rhomboid protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
41894576 .. 41897689
3114 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G507800.3

Sequence Viewer

Length: 1203 bp
ATGGCCGTCGACCCATCGAAGCTCTCAATGGCCTTCGACCCATCAAAGCTTCAGACCCAAATCGACATCAAGCCTCCACCGCCTCCGTTCTTCACCGAATCAGCTGCCGAAACCCTCCAAGAACCCACCAAGCTCTCCTTCTTCGCCTCCCGCTACCGTCGTCCTCGCCGCCATCGAGCTGACACGTGGCTCATCTCGCTCTTTGTTATTCTTCATATCGTCGCCTTCATGGCCACCATGGTCGTCAACGACTGCTGGAGCAAGTCTCATGGCGACTGTGTTCTGAAGGCCTTTGGGAGGTTGTCGTTTCAGCCGCTCTCCGAGAACCCACTCCTCGGCCCTTCGGCTTCCACGCTTGATGAAATGGGAGCTCTTCGACGGACTGTTTTAACAGAGAACCACCAAACTTGGCGTCTTTTCACATTTCCATGTCTGCACGCCGGAGCCATCCACCTTGTGATCAACCTTAGCTGTGTTATCTTTGTTGGAATTCACTTGGAGCAAGAGTTTGGACCAATAATGGCAGGGTTAATCTACATACTCTCTGCTTTTGTCGGTACGTTGGTGGCTGCACTTTTTGTTGAGAAACGCCCATCAGTCGGTTCTTCCGGAGCTCTGTTTGGGTTACTTGGAGCTACACTTTCTGCACTGATTCAGAACTGGGAAATGTACACCAATAAGTTCACAGCTCTGGCATCAGTAATATTTGTCTCCATTGGCAATTTTCTCCTTGGTTTGCTACCTTATGTTGACAATTTCTCAAGCATTGGAGGCTTTATATCTGGGTTCCTACTCGGATCTGTGTTTTTATCCAGTCCCAAGGTCAAAGAAGTGGCGCAAGATAAAGGAGGCCTCATGGATTATGATCTCAAAAGTTATATCAAGTCGAGGTTGAGGCAGAAGTTGGACAGGCCAGTCTATAGGAGTGTCTCTATTCTTCTCTTTGGTCTTATGCTTGCTGGATGTCTGGTAGGAGTTCTGCAAGGCATTAACATGAACCAGTACTGCGGGTGGTGTCGGTATGCTGATTGTGTCCCTTCCAAAAGCTGGAGCTGCAGAGACATGGAAAATTCTTGTGAGACCATGGCGAGCAATGAACAGTTGACTTTGACTTGTATGGCTAACGGGAATTTCAGGGTTCTTCCATTCACCAACATCTCTCAAGCTAGGACGAACGACTTGTGCAGTGTGATATGCTCATAG

Protein Analysis

401

Amino Acids

44.18

Weight (kDa)

8.53

Isoelectric Point (pI)

39.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014538)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 914
AccB7I CCANNNNNTGG 1 cut(s) 1047
AccBSI CCGCTC 1 cut(s) 316
AccI GTMKAC 1 cut(s) 9
AccIII TCCGGA 1 cut(s) 608
AciI CCGC 5 cut(s) 80, 151, 169, 314, 1008
AclWI GGATC 1 cut(s) 805
AcoI YGGCCR 2 cut(s) 3, 231
AcsI RAATTY 3 cut(s) 489, 1069, 1129
AcuI CTGAAG 2 cut(s) 35, 305
AcvI CACGTG 1 cut(s) 186
AcyI GRCGYC 1 cut(s) 412
AdeI CACNNNGTG 1 cut(s) 457
AfaI GTAC 3 cut(s) 559, 671, 1004
AfiI CCNNNNNNNGG 4 cut(s) 297, 335, 599, 1047
AflIII ACRYGT 1 cut(s) 183
AjuI GAANNNNNNNTTGG 2 cut(s) 122, 154
Alw21I GWGCWC 2 cut(s) 373, 616
Alw26I GTCTC 5 cut(s) 270, 715, 934, 1053, 1073
AlwI GGATC 1 cut(s) 805
Aor13HI TCCGGA 1 cut(s) 608
AoxI GGCC 7 cut(s) 3, 30, 231, 288, 337, 850, 911
ApeKI GCWGC 3 cut(s) 104, 569, 1053
ApoI RAATTY 3 cut(s) 489, 1069, 1129
ArsI GACNNNNNNTTYG 2 cut(s) 397, 429
AspLEI GCGC 1 cut(s) 838
AspS9I GGNCC 2 cut(s) 338, 512
AsuHPI GGTGA 2 cut(s) 85, 1141
AvaII GGWCC 1 cut(s) 512
BaeI ACNNNNGTAYC 2 cut(s) 549, 582
BalI TGGCCA 1 cut(s) 233
BanII GRGCYC 2 cut(s) 373, 616
BbrPI CACGTG 1 cut(s) 186
Bbv12I GWGCWC 2 cut(s) 373, 616
BbvI GCAGC 3 cut(s) 91, 556, 1040
BccI CCATC 5 cut(s) 22, 49, 180, 455, 601
BcgI CGANNNNNNTGC 2 cut(s) 86, 120
BclI TGATCA 1 cut(s) 459
BcoDI GTCTC 5 cut(s) 270, 715, 934, 1053, 1073
BfaI CTAG 1 cut(s) 1167
BfmI CTRYAG 2 cut(s) 919, 1054
BglI GCCNNNNNGGC 1 cut(s) 230
BisI GCNGC 5 cut(s) 105, 169, 314, 570, 1054
BlsI GCNGC 5 cut(s) 106, 170, 315, 571, 1055
BmcAI AGTACT 1 cut(s) 1004
Bme18I GGWCC 1 cut(s) 512
BmgT120I GGNCC 2 cut(s) 338, 512
BmiI GGNNCC 2 cut(s) 445, 788
BmrI ACTGGG 1 cut(s) 670
BmsI GCATC 1 cut(s) 704
BmuI ACTGGG 1 cut(s) 670
BplI GAGNNNNNCTC 2 cut(s) 250, 282
BpmI CTGGAG 2 cut(s) 277, 1069
Bpu10I CCTNAGC 1 cut(s) 467
BpuEI CTTGAG 2 cut(s) 745, 1146
BsaAI YACGTR 1 cut(s) 186
BsaBI GATNNNNATC 1 cut(s) 864
BsaHI GRCGYC 1 cut(s) 412
BsaI GGTCTC 1 cut(s) 1073
BsaJI CCNNGG 5 cut(s) 237, 334, 730, 819, 1083
BsaWI WCCGGW 1 cut(s) 608
BsaXI ACNNNNNCTCC 2 cut(s) 491, 521
Bsc4I CCNNNNNNNGG 4 cut(s) 297, 335, 599, 1047
Bse1I ACTGG 4 cut(s) 665, 813, 914, 1000
Bse3DI GCAATG 1 cut(s) 1099
Bse8I GATNNNNATC 1 cut(s) 864
BseAI TCCGGA 1 cut(s) 608
BseDI CCNNGG 5 cut(s) 237, 334, 730, 819, 1083
BseGI GGATG 2 cut(s) 447, 968
BseJI GATNNNNATC 1 cut(s) 864
BseLI CCNNNNNNNGG 4 cut(s) 297, 335, 599, 1047
BseMI GCAATG 1 cut(s) 1099
BseNI ACTGG 4 cut(s) 665, 813, 914, 1000
BseRI GAGGAG 1 cut(s) 323
BseXI GCAGC 3 cut(s) 91, 556, 1040
BsgI GTGCAG 3 cut(s) 419, 555, 630
BshFI GGCC 7 cut(s) 5, 32, 233, 290, 339, 852, 913
BsiHKAI GWGCWC 2 cut(s) 373, 616
BsiSI CCGG 2 cut(s) 441, 609
BslFI GGGAC 2 cut(s) 801, 1019
BslI CCNNNNNNNGG 4 cut(s) 297, 335, 599, 1047
BsmAI GTCTC 5 cut(s) 270, 715, 934, 1053, 1073
BsmFI GGGAC 2 cut(s) 801, 1019
BsnI GGCC 7 cut(s) 5, 32, 233, 290, 339, 852, 913
Bso31I GGTCTC 1 cut(s) 1073
Bsp1286I GDGCHC 2 cut(s) 373, 616
Bsp13I TCCGGA 1 cut(s) 608
Bsp1407I TGTACA 1 cut(s) 669
Bsp143I GATC 3 cut(s) 459, 797, 865
Bsp19I CCATGG 2 cut(s) 237, 1083
BspACI CCGC 5 cut(s) 80, 151, 169, 314, 1008
BspANI GGCC 7 cut(s) 5, 32, 233, 290, 339, 852, 913
BspEI TCCGGA 1 cut(s) 608
BspLI GGNNCC 2 cut(s) 445, 788
BspMAI CTGCAG 1 cut(s) 1058
BspPI GGATC 1 cut(s) 805
BspQI GCTCTTC 1 cut(s) 378
BspTNI GGTCTC 1 cut(s) 1073
BsrBI CCGCTC 1 cut(s) 316
BsrDI GCAATG 1 cut(s) 1099
BsrGI TGTACA 1 cut(s) 669
BsrI ACTGG 4 cut(s) 665, 813, 914, 1000
BssECI CCNNGG 5 cut(s) 237, 334, 730, 819, 1083
BssMI GATC 3 cut(s) 459, 797, 865
BssNI GRCGYC 1 cut(s) 412
BssT1I CCWWGG 4 cut(s) 237, 730, 819, 1083
Bst4CI ACNGT 4 cut(s) 158, 278, 385, 1101
Bst6I CTCTTC 1 cut(s) 378
BstACI GRCGYC 1 cut(s) 412
BstAUI TGTACA 1 cut(s) 669
BstBAI YACGTR 1 cut(s) 186
BstC8I GCNNGC 3 cut(s) 438, 957, 1090
BstDEI CTNAG 1 cut(s) 467
BstDSI CCRYGG 2 cut(s) 237, 1083
BstENI CCTNNNNNAGG 1 cut(s) 295
BstF5I GGATG 2 cut(s) 447, 968
BstHHI GCGC 1 cut(s) 838
BstKTI GATC 3 cut(s) 462, 800, 868
BstMAI GTCTC 5 cut(s) 270, 715, 934, 1053, 1073
BstMBI GATC 3 cut(s) 459, 797, 865
BstMWI GCNNNNNNNGC 5 cut(s) 79, 196, 230, 771, 1053
BstSFI CTRYAG 2 cut(s) 919, 1054
BstV1I GCAGC 3 cut(s) 91, 556, 1040
BstX2I RGATCY 1 cut(s) 797
BstYI RGATCY 1 cut(s) 797
BsuRI GGCC 7 cut(s) 5, 32, 233, 290, 339, 852, 913
BtgI CCRYGG 2 cut(s) 237, 1083
BtsCI GGATG 2 cut(s) 447, 968
BtsI GCAGTG 1 cut(s) 1192
BtsIMutI CAGTG 2 cut(s) 647, 1192
Cac8I GCNNGC 3 cut(s) 438, 957, 1090
CfoI GCGC 1 cut(s) 838
Cfr13I GGNCC 2 cut(s) 338, 512
CseI GACGC 1 cut(s) 401
Csp6I GTAC 3 cut(s) 558, 670, 1003
CspCI CAANNNNNGTGG 2 cut(s) 389, 424
CviAII CATG 8 cut(s) 229, 238, 269, 429, 856, 994, 1063, 1084
CviQI GTAC 3 cut(s) 558, 670, 1003
DdeI CTNAG 1 cut(s) 467
DpnI GATC 3 cut(s) 461, 799, 867
DpnII GATC 3 cut(s) 459, 797, 865
DraIII CACNNNGTG 1 cut(s) 457
DrdI GACNNNNNNGTC 1 cut(s) 914
DseDI GACNNNNNNGTC 1 cut(s) 914
EaeI YGGCCR 2 cut(s) 3, 231
Eam1104I CTCTTC 1 cut(s) 378
EarI CTCTTC 1 cut(s) 378
Ecl136II GAGCTC 2 cut(s) 371, 614
Eco130I CCWWGG 4 cut(s) 237, 730, 819, 1083
Eco147I AGGCCT 2 cut(s) 290, 852
Eco24I GRGCYC 2 cut(s) 373, 616
Eco31I GGTCTC 1 cut(s) 1073
Eco47I GGWCC 1 cut(s) 512
Eco53kI GAGCTC 2 cut(s) 371, 614
Eco57I CTGAAG 2 cut(s) 35, 305
Eco72I CACGTG 1 cut(s) 186
EcoICRI GAGCTC 2 cut(s) 371, 614
EcoNI CCTNNNNNAGG 1 cut(s) 295
EcoRI GAATTC 1 cut(s) 489
EcoT14I CCWWGG 4 cut(s) 237, 730, 819, 1083
EcoT38I GRGCYC 2 cut(s) 373, 616
ErhI CCWWGG 4 cut(s) 237, 730, 819, 1083
FaeI CATG 8 cut(s) 232, 241, 272, 432, 859, 997, 1066, 1087
FalI AAGNNNNNCTT 2 cut(s) 122, 154
FaqI GGGAC 2 cut(s) 801, 1019
FatI CATG 8 cut(s) 228, 237, 268, 428, 855, 993, 1062, 1083
FauI CCCGC 2 cut(s) 158, 1001
FbaI TGATCA 1 cut(s) 459
FblI GTMKAC 1 cut(s) 9
Fnu4HI GCNGC 5 cut(s) 105, 169, 314, 570, 1054
FokI GGATG 2 cut(s) 434, 975
FriOI GRGCYC 2 cut(s) 373, 616
Fsp4HI GCNGC 5 cut(s) 105, 169, 314, 570, 1054
FspBI CTAG 1 cut(s) 1167
GlaI GCGC 1 cut(s) 837
GluI GCNGC 5 cut(s) 105, 169, 314, 570, 1054
GsuI CTGGAG 2 cut(s) 277, 1069
HaeIII GGCC 7 cut(s) 5, 32, 233, 290, 339, 852, 913
HapII CCGG 2 cut(s) 441, 609
HgaI GACGC 1 cut(s) 401
HhaI GCGC 1 cut(s) 838
Hin1I GRCGYC 1 cut(s) 412
Hin1II CATG 8 cut(s) 232, 241, 272, 432, 859, 997, 1066, 1087
Hin6I GCGC 1 cut(s) 836
HinP1I GCGC 1 cut(s) 836
HincII GTYRAC 4 cut(s) 10, 247, 751, 1104
HindII GTYRAC 4 cut(s) 10, 247, 751, 1104
HindIII AAGCTT 1 cut(s) 47
HinfI GANTC 2 cut(s) 98, 652
HpaII CCGG 2 cut(s) 441, 609
HphI GGTGA 2 cut(s) 85, 1141
Hpy166II GTNNAC 6 cut(s) 10, 247, 672, 684, 751, 1104
Hpy188I TCNGA 5 cut(s) 54, 285, 322, 657, 797
Hpy188III TCNNGA 1 cut(s) 609
Hpy8I GTNNAC 6 cut(s) 10, 247, 672, 684, 751, 1104
Hpy99I CGWCG 4 cut(s) 11, 162, 224, 381
HpyAV CCTTC 6 cut(s) 43, 148, 235, 280, 351, 1047
HpyCH4III ACNGT 4 cut(s) 158, 278, 385, 1101
HpyCH4IV ACGT 2 cut(s) 185, 560
HpyCH4V TGCA 6 cut(s) 436, 572, 647, 982, 1056, 1185
HpyF10VI GCNNNNNNNGC 5 cut(s) 79, 196, 230, 771, 1053
HpyF3I CTNAG 1 cut(s) 467
HpySE526I ACGT 2 cut(s) 185, 560
Hsp92I GRCGYC 1 cut(s) 412
Hsp92II CATG 8 cut(s) 232, 241, 272, 432, 859, 997, 1066, 1087
HspAI GCGC 1 cut(s) 836
Kpn2I TCCGGA 1 cut(s) 608
Ksp22I TGATCA 1 cut(s) 459
Kzo9I GATC 3 cut(s) 459, 797, 865
LguI GCTCTTC 1 cut(s) 378
LmnI GCTCC 7 cut(s) 258, 368, 443, 499, 611, 632, 1050
Lsp1109I GCAGC 3 cut(s) 91, 556, 1040
LweI GCATC 1 cut(s) 704
MaeI CTAG 1 cut(s) 1167
MaeII ACGT 2 cut(s) 185, 560
MaeIII GTNAC 1 cut(s) 624
MalI GATC 3 cut(s) 461, 799, 867
MbiI CCGCTC 1 cut(s) 316
MboI GATC 3 cut(s) 459, 797, 865
MboII GAAGA 7 cut(s) 82, 133, 203, 365, 597, 929, 1133
MflI RGATCY 1 cut(s) 797
MhlI GDGCHC 2 cut(s) 373, 616
MlsI TGGCCA 1 cut(s) 233
MluCI AATT 5 cut(s) 489, 721, 754, 1069, 1129
MluNI TGGCCA 1 cut(s) 233
MmeI TCCRAC 2 cut(s) 466, 885
Mox20I TGGCCA 1 cut(s) 233
MroI TCCGGA 1 cut(s) 608
MscI TGGCCA 1 cut(s) 233
MseI TTAA 3 cut(s) 389, 530, 990
MslI CAYNNNNRTG 2 cut(s) 427, 992
Msp20I TGGCCA 1 cut(s) 233
MspA1I CMGCKG 1 cut(s) 104
MspI CCGG 2 cut(s) 441, 609
MwoI GCNNNNNNNGC 5 cut(s) 79, 196, 230, 771, 1053
NcoI CCATGG 2 cut(s) 237, 1083
NdeII GATC 3 cut(s) 459, 797, 865
NlaIII CATG 8 cut(s) 232, 241, 272, 432, 859, 997, 1066, 1087
NlaIV GGNNCC 2 cut(s) 445, 788
NmeAIII GCCGAG 1 cut(s) 315
PceI AGGCCT 2 cut(s) 290, 852
PciSI GCTCTTC 1 cut(s) 378
PcsI WCGNNNNNNNCGW 1 cut(s) 172
PfeI GAWTC 2 cut(s) 98, 652
PflMI CCANNNNNTGG 1 cut(s) 1047
PkrI GCNGC 5 cut(s) 106, 170, 315, 571, 1055
PmaCI CACGTG 1 cut(s) 186
PmlI CACGTG 1 cut(s) 186
Ppu21I YACGTR 1 cut(s) 186
Psp124BI GAGCTC 2 cut(s) 373, 616
PspCI CACGTG 1 cut(s) 186
PspN4I GGNNCC 2 cut(s) 445, 788
PspPI GGNCC 2 cut(s) 338, 512
PstI CTGCAG 1 cut(s) 1058
PsuI RGATCY 1 cut(s) 797
PvuII CAGCTG 1 cut(s) 104
RsaI GTAC 3 cut(s) 559, 671, 1004
RsaNI GTAC 3 cut(s) 558, 670, 1003
RseI CAYNNNNRTG 2 cut(s) 427, 992
SacI GAGCTC 2 cut(s) 373, 616
SalI GTCGAC 1 cut(s) 8
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 3 cut(s) 389, 530, 990
SatI GCNGC 5 cut(s) 105, 169, 314, 570, 1054
Sau3AI GATC 3 cut(s) 459, 797, 865
Sau96I GGNCC 2 cut(s) 338, 512
ScaI AGTACT 1 cut(s) 1004
SduI GDGCHC 2 cut(s) 373, 616
SfaNI GCATC 1 cut(s) 704
SfcI CTRYAG 2 cut(s) 919, 1054
SinI GGWCC 1 cut(s) 512
SmiMI CAYNNNNRTG 2 cut(s) 427, 992
SmlI CTYRAG 2 cut(s) 760, 1161
SmoI CTYRAG 2 cut(s) 760, 1161
Sse9I AATT 5 cut(s) 489, 721, 754, 1069, 1129
SseBI AGGCCT 2 cut(s) 290, 852
SsiI CCGC 5 cut(s) 80, 151, 169, 314, 1008
SspI AATATT 1 cut(s) 705
SspMI CTAG 1 cut(s) 1167
SstI GAGCTC 2 cut(s) 373, 616
StuI AGGCCT 2 cut(s) 290, 852
StyI CCWWGG 4 cut(s) 237, 730, 819, 1083
TaaI ACNGT 4 cut(s) 158, 278, 385, 1101
TaiI ACGT 2 cut(s) 188, 563
TaqI TCGA 7 cut(s) 9, 17, 36, 63, 175, 376, 887
TasI AATT 5 cut(s) 489, 721, 754, 1069, 1129
TatI WGTACW 2 cut(s) 669, 1002
TauI GCSGC 2 cut(s) 171, 316
TfiI GAWTC 2 cut(s) 98, 652
Tru1I TTAA 3 cut(s) 389, 530, 990
Tru9I TTAA 3 cut(s) 389, 530, 990
TscAI CASTG 2 cut(s) 654, 1192
TseI GCWGC 3 cut(s) 104, 569, 1053
TspDTI ATGAA 5 cut(s) 203, 217, 375, 1010, 1110
TspGWI ACGGA 2 cut(s) 75, 394
TspRI CASTG 2 cut(s) 654, 1192
Van91I CCANNNNNTGG 1 cut(s) 1047
VpaK11BI GGWCC 1 cut(s) 512
XagI CCTNNNNNAGG 1 cut(s) 295
XapI RAATTY 3 cut(s) 489, 1069, 1129
XmiI GTMKAC 1 cut(s) 9
XspI CTAG 1 cut(s) 1167
ZrmI AGTACT 1 cut(s) 1004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.