Prupe.1G518200_v2.0.a1

Belongs to the 14-3-3 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
42569877 .. 42573953
4077 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G518200.1

Sequence Viewer

Length: 762 bp
ATGGACATTGAGAGAAAGAAACATGTTTACCTGGCGAAGCTTGCTGAGCAAGCCGAGAGATATGATGAGATGGTTGAAGCAATGAAGAAAGTTTCCAAGTTGGATGTGGAACTGACTGTGGAGGAGCGGAACTTGGTGTCTGTTGGGTATAAGAATGTCATTGGGGCGAGAAGGGCGTCATGGCGGATATTGTCTTCCGTTGAACAAAAGGAGGAGGCCAAGGGAAGTGAACAGAATGCTATGAGGATAAAGGAGTACAGGCAGAGGGTTGAAGATGAGCTTGCAAAAATTTGCCATGACATTTTAACAGTTATTGATTACCACCTCCTTCCATCTGCATCAACAGGGGAATCTACTGTTTTTTACCAGAAGATGAAAGGAGATTACTATCGATATTTGGCTGAATTTAAAGCTGGTGATGATCGTAAAGAAGTGGCTGATCAATCGCTTAAAGCCTATGAGGTTGCCAACGATACTGCTGACTCTGAGTTGCCCACAACCCATCCAATTAGACTTGGCCTGGCTCTAAACTTCTCTGTTTTTTACTATGAAATTCTCAACTCCCCTGAGAGGGCCTGTCATTTAGCTAAGCAGGCATTTGATGAGGCAATTGCTGAACTTGACAGCCTCAATGAAGAATCCTACAAGGACAGCACCCTTATTATGCAACTTCTCAAGGATAATCTCACATTGTGGACCTCAGATCTGCCAGAGGAAGGAGGTGAGCAATCTAAAGTTGAGGAACCCCCTCCAAAGAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

254

Amino Acids

28.97

Weight (kDa)

4.95

Isoelectric Point (pI)

47.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0010696)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 127
AciI CCGC 2 cut(s) 127, 184
AcsI RAATTY 3 cut(s) 288, 404, 552
AcyI GRCGYC 1 cut(s) 176
AdeI CACNNNGTG 1 cut(s) 693
AfaI GTAC 1 cut(s) 257
AfiI CCNNNNNNNGG 3 cut(s) 570, 571, 716
AflIII ACRYGT 1 cut(s) 22
AgsI TTSAA 3 cut(s) 77, 203, 272
AjnI CCWGG 2 cut(s) 30, 519
AluBI AGCT 4 cut(s) 40, 280, 413, 587
AluI AGCT 4 cut(s) 40, 280, 413, 587
AoxI GGCC 3 cut(s) 216, 517, 573
ApoI RAATTY 3 cut(s) 288, 404, 552
AspS9I GGNCC 2 cut(s) 573, 696
AsuHPI GGTGA 2 cut(s) 428, 734
AvaII GGWCC 1 cut(s) 696
BbsI GAAGAC 1 cut(s) 186
BccI CCATC 3 cut(s) 64, 340, 510
BciT130I CCWGG 2 cut(s) 32, 521
BclI TGATCA 1 cut(s) 439
BglII AGATCT 1 cut(s) 703
BlpI GCTNAGC 2 cut(s) 45, 588
Bme1390I CCNGG 2 cut(s) 32, 521
Bme18I GGWCC 1 cut(s) 696
BmgT120I GGNCC 2 cut(s) 573, 696
BmiI GGNNCC 1 cut(s) 744
BmrFI CCNGG 2 cut(s) 32, 521
BmsI GCATC 1 cut(s) 347
BpiI GAAGAC 1 cut(s) 186
Bpu1102I GCTNAGC 2 cut(s) 45, 588
BpuEI CTTGAG 1 cut(s) 659
Bsa29I ATCGAT 1 cut(s) 391
BsaBI GATNNNNATC 1 cut(s) 387
BsaHI GRCGYC 1 cut(s) 176
BsaJI CCNNGG 1 cut(s) 219
Bsc4I CCNNNNNNNGG 3 cut(s) 570, 571, 716
Bse3DI GCAATG 1 cut(s) 87
Bse8I GATNNNNATC 1 cut(s) 387
BseBI CCWGG 2 cut(s) 32, 521
BseCI ATCGAT 1 cut(s) 391
BseDI CCNNGG 1 cut(s) 219
BseGI GGATG 2 cut(s) 109, 502
BseJI GATNNNNATC 1 cut(s) 387
BseLI CCNNNNNNNGG 3 cut(s) 570, 571, 716
BseMI GCAATG 1 cut(s) 87
BseMII CTCAG 4 cut(s) 36, 477, 558, 714
BseRI GAGGAG 2 cut(s) 137, 227
BshFI GGCC 3 cut(s) 218, 519, 575
BshVI ATCGAT 1 cut(s) 391
BslI CCNNNNNNNGG 3 cut(s) 570, 571, 716
BsmI GAATGC 1 cut(s) 241
BsnI GGCC 3 cut(s) 218, 519, 575
Bsp143I GATC 3 cut(s) 421, 439, 703
Bsp1720I GCTNAGC 2 cut(s) 45, 588
BspACI CCGC 2 cut(s) 127, 184
BspANI GGCC 3 cut(s) 218, 519, 575
BspCNI CTCAG 4 cut(s) 37, 478, 559, 713
BspDI ATCGAT 1 cut(s) 391
BspLI GGNNCC 1 cut(s) 744
BsrBI CCGCTC 1 cut(s) 127
BsrDI GCAATG 1 cut(s) 87
BssECI CCNNGG 1 cut(s) 219
BssMI GATC 3 cut(s) 421, 439, 703
BssNI GRCGYC 1 cut(s) 176
BssT1I CCWWGG 1 cut(s) 219
Bst2UI CCWGG 2 cut(s) 32, 521
Bst4CI ACNGT 3 cut(s) 118, 310, 358
BstACI GRCGYC 1 cut(s) 176
BstC8I GCNNGC 4 cut(s) 42, 51, 282, 594
BstDEI CTNAG 5 cut(s) 45, 486, 567, 588, 700
BstF5I GGATG 2 cut(s) 109, 502
BstKTI GATC 3 cut(s) 424, 442, 706
BstMBI GATC 3 cut(s) 421, 439, 703
BstMWI GCNNNNNNNGC 5 cut(s) 41, 46, 50, 173, 593
BstNI CCWGG 2 cut(s) 32, 521
BstNSI RCATGY 1 cut(s) 26
BstSCI CCNGG 2 cut(s) 30, 519
BstV2I GAAGAC 1 cut(s) 186
BstX2I RGATCY 1 cut(s) 703
BstYI RGATCY 1 cut(s) 703
Bsu15I ATCGAT 1 cut(s) 391
BsuRI GGCC 3 cut(s) 218, 519, 575
BsuTUI ATCGAT 1 cut(s) 391
BtsCI GGATG 2 cut(s) 109, 502
Cac8I GCNNGC 4 cut(s) 42, 51, 282, 594
Cfr13I GGNCC 2 cut(s) 573, 696
ClaI ATCGAT 1 cut(s) 391
CseI GACGC 1 cut(s) 165
Csp6I GTAC 1 cut(s) 256
CviAII CATG 3 cut(s) 23, 180, 296
CviQI GTAC 1 cut(s) 256
DdeI CTNAG 5 cut(s) 45, 486, 567, 588, 700
DpnI GATC 3 cut(s) 423, 441, 705
DpnII GATC 3 cut(s) 421, 439, 703
DraI TTTAAA 1 cut(s) 409
DraIII CACNNNGTG 1 cut(s) 693
EciI GGCGGA 1 cut(s) 199
Eco130I CCWWGG 1 cut(s) 219
Eco47I GGWCC 1 cut(s) 696
EcoO109I RGGNCCY 1 cut(s) 573
EcoRII CCWGG 2 cut(s) 30, 519
EcoT14I CCWWGG 1 cut(s) 219
ErhI CCWWGG 1 cut(s) 219
FaeI CATG 3 cut(s) 26, 183, 299
FaiI YATR 9 cut(s) 24, 63, 150, 181, 242, 297, 459, 549, 665
FalI AAGNNNNNCTT 2 cut(s) 264, 296
FatI CATG 3 cut(s) 22, 179, 295
FbaI TGATCA 1 cut(s) 439
FokI GGATG 2 cut(s) 116, 489
HaeIII GGCC 3 cut(s) 218, 519, 575
HgaI GACGC 1 cut(s) 165
Hin1I GRCGYC 1 cut(s) 176
Hin1II CATG 3 cut(s) 26, 183, 299
HindIII AAGCTT 1 cut(s) 38
HinfI GANTC 3 cut(s) 350, 482, 638
HphI GGTGA 2 cut(s) 428, 734
Hpy166II GTNNAC 3 cut(s) 28, 230, 696
Hpy188I TCNGA 2 cut(s) 487, 703
Hpy8I GTNNAC 3 cut(s) 28, 230, 696
HpyAV CCTTC 3 cut(s) 165, 338, 710
HpyCH4III ACNGT 3 cut(s) 118, 310, 358
HpyCH4V TGCA 3 cut(s) 284, 338, 667
HpyF10VI GCNNNNNNNGC 5 cut(s) 41, 46, 50, 173, 593
HpyF3I CTNAG 5 cut(s) 45, 486, 567, 588, 700
Hsp92I GRCGYC 1 cut(s) 176
Hsp92II CATG 3 cut(s) 26, 183, 299
Ksp22I TGATCA 1 cut(s) 439
Kzo9I GATC 3 cut(s) 421, 439, 703
LmnI GCTCC 1 cut(s) 124
LweI GCATC 1 cut(s) 347
MalI GATC 3 cut(s) 423, 441, 705
MbiI CCGCTC 1 cut(s) 127
MboI GATC 3 cut(s) 421, 439, 703
MboII GAAGA 5 cut(s) 97, 186, 284, 382, 647
MfeI CAATTG 1 cut(s) 609
MflI RGATCY 1 cut(s) 703
MluCI AATT 5 cut(s) 288, 404, 507, 552, 609
MlyI GAGTC 1 cut(s) 476
MmeI TCCRAC 1 cut(s) 81
MseI TTAA 3 cut(s) 305, 408, 450
MspR9I CCNGG 2 cut(s) 32, 521
MunI CAATTG 1 cut(s) 609
Mva1269I GAATGC 1 cut(s) 241
MvaI CCWGG 2 cut(s) 32, 521
MwoI GCNNNNNNNGC 5 cut(s) 41, 46, 50, 173, 593
NdeII GATC 3 cut(s) 421, 439, 703
NlaIII CATG 3 cut(s) 26, 183, 299
NlaIV GGNNCC 1 cut(s) 744
NmeAIII GCCGAG 1 cut(s) 79
NspI RCATGY 1 cut(s) 26
PciI ACATGT 1 cut(s) 22
PctI GAATGC 1 cut(s) 241
PfeI GAWTC 2 cut(s) 350, 638
PleI GAGTC 1 cut(s) 476
PpsI GAGTC 1 cut(s) 476
PscI ACATGT 1 cut(s) 22
Psp6I CCWGG 2 cut(s) 30, 519
PspGI CCWGG 2 cut(s) 30, 519
PspN4I GGNNCC 1 cut(s) 744
PspPI GGNCC 2 cut(s) 573, 696
PsuI RGATCY 1 cut(s) 703
RsaI GTAC 1 cut(s) 257
RsaNI GTAC 1 cut(s) 256
SaqAI TTAA 3 cut(s) 305, 408, 450
Sau3AI GATC 3 cut(s) 421, 439, 703
Sau96I GGNCC 2 cut(s) 573, 696
SchI GAGTC 1 cut(s) 476
ScrFI CCNGG 2 cut(s) 32, 521
SetI ASST 9 cut(s) 33, 42, 282, 327, 415, 465, 589, 701, 724
SfaNI GCATC 1 cut(s) 347
SinI GGWCC 1 cut(s) 696
SmlI CTYRAG 1 cut(s) 674
SmoI CTYRAG 1 cut(s) 674
Sse9I AATT 5 cut(s) 288, 404, 507, 552, 609
SsiI CCGC 2 cut(s) 127, 184
StyD4I CCNGG 2 cut(s) 30, 519
StyI CCWWGG 1 cut(s) 219
TaaI ACNGT 3 cut(s) 118, 310, 358
TaqI TCGA 1 cut(s) 391
TasI AATT 5 cut(s) 288, 404, 507, 552, 609
TatI WGTACW 1 cut(s) 255
TfiI GAWTC 2 cut(s) 350, 638
Tru1I TTAA 3 cut(s) 305, 408, 450
Tru9I TTAA 3 cut(s) 305, 408, 450
TspDTI ATGAA 4 cut(s) 98, 389, 564, 648
TspGWI ACGGA 1 cut(s) 187
VpaK11BI GGWCC 1 cut(s) 696
XapI RAATTY 3 cut(s) 288, 404, 552
XceI RCATGY 1 cut(s) 26
XcmI CCANNNNNNNNNTGG 1 cut(s) 103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.