Prupe.1G558000_v2.0.a1

Belongs to the universal ribosomal protein uL14 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
45558262 .. 45561422
3161 bp
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UTR
Exon/CDS
Intron
Prupe.1G558000.1

Sequence Viewer

Length: 507 bp
ATGGCTGCGGGTTTAGCTTCAAAGTGTTCACGCGTGGGTCGCTCATTGTTGGGGGGGCTTGGCAACAATTCGTCTGGCTTATTGAGCACATCACATGAGATGACATGCAGCACTTTCTTGTCTCAGCAGCAAAGGACCTTCATACAGATGAGGACTATTCTCAAAGTGGTGGACAACTCAGGGGCGAAAAAGGTGATGTGCATACAAGCTTTGAAGGCAAACAAGAAAGGGGCAAGATTGGGAGACACAATTGTTGCATCAGTAAAGGAGGCACATCCCAATGGGAAAGTGAAGAAAGGACAGGTTGTGTATGGCGTGGTTGTTCGTGCTGCCATGCAACGAGGTCGTTGTGATGGGAGTGAGGTCAAGTTTGATGACAATGCTGTGGTGCTTGTTGACAAGCAAGGGCGGCAGCCGATTGGGACTAGAGTATTTGGACCCGTCCCGCATGAGTTGAGGAAGAAGAAGCATGTCAAGATTCTTAGTTTGGCGGAGCAGATTGCCTGA

Protein Analysis

169

Amino Acids

18.04

Weight (kDa)

10.3

Isoelectric Point (pI)

20.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 33
AciI CCGC 4 cut(s) 8, 409, 446, 491
AflIII ACRYGT 1 cut(s) 31
AgsI TTSAA 2 cut(s) 21, 214
AluBI AGCT 2 cut(s) 17, 209
AluI AGCT 2 cut(s) 17, 209
Alw21I GWGCWC 1 cut(s) 89
Alw26I GTCTC 2 cut(s) 126, 237
ApeKI GCWGC 5 cut(s) 5, 108, 127, 329, 412
AspS9I GGNCC 2 cut(s) 135, 437
AsuHPI GGTGA 1 cut(s) 205
AvaII GGWCC 2 cut(s) 135, 437
Bbv12I GWGCWC 1 cut(s) 89
BbvI GCAGC 4 cut(s) 120, 139, 316, 424
BccI CCATC 1 cut(s) 347
BcgI CGANNNNNNTGC 2 cut(s) 326, 360
BcoDI GTCTC 2 cut(s) 126, 237
BfaI CTAG 1 cut(s) 426
BisI GCNGC 6 cut(s) 6, 109, 128, 330, 410, 413
BlsI GCNGC 6 cut(s) 7, 110, 129, 331, 411, 414
Bme18I GGWCC 2 cut(s) 135, 437
BmgT120I GGNCC 2 cut(s) 135, 437
BmiI GGNNCC 1 cut(s) 439
BmsI GCATC 1 cut(s) 266
BseGI GGATG 1 cut(s) 274
BseMII CTCAG 2 cut(s) 137, 192
BseXI GCAGC 4 cut(s) 120, 139, 316, 424
Bsh1236I CGCG 1 cut(s) 33
BsiHKAI GWGCWC 1 cut(s) 89
BslFI GGGAC 2 cut(s) 428, 436
BsmAI GTCTC 2 cut(s) 126, 237
BsmFI GGGAC 2 cut(s) 428, 436
Bsp1286I GDGCHC 1 cut(s) 89
BspACI CCGC 4 cut(s) 8, 409, 446, 491
BspCNI CTCAG 2 cut(s) 136, 191
BspFNI CGCG 1 cut(s) 33
BspLI GGNNCC 1 cut(s) 439
BstDEI CTNAG 3 cut(s) 123, 178, 482
BstF5I GGATG 1 cut(s) 274
BstFNI CGCG 1 cut(s) 33
BstMAI GTCTC 2 cut(s) 126, 237
BstMWI GCNNNNNNNGC 5 cut(s) 14, 39, 84, 215, 409
BstNSI RCATGY 2 cut(s) 108, 473
BstUI CGCG 1 cut(s) 33
BstV1I GCAGC 4 cut(s) 120, 139, 316, 424
BtsCI GGATG 1 cut(s) 274
Cfr13I GGNCC 2 cut(s) 135, 437
CviAII CATG 5 cut(s) 95, 105, 334, 449, 470
CviJI RGCY 6 cut(s) 5, 17, 58, 78, 209, 415
CviKI_1 RGCY 6 cut(s) 5, 17, 58, 78, 209, 415
DdeI CTNAG 3 cut(s) 123, 178, 482
EciI GGCGGA 1 cut(s) 506
Eco47I GGWCC 2 cut(s) 135, 437
EcoO109I RGGNCCY 1 cut(s) 135
FaeI CATG 5 cut(s) 98, 108, 337, 452, 473
FaiI YATR 8 cut(s) 96, 106, 143, 203, 312, 335, 450, 471
FaqI GGGAC 2 cut(s) 428, 436
FatI CATG 5 cut(s) 94, 104, 333, 448, 469
FauI CCCGC 1 cut(s) 453
Fnu4HI GCNGC 6 cut(s) 6, 109, 128, 330, 410, 413
FokI GGATG 1 cut(s) 261
Fsp4HI GCNGC 6 cut(s) 6, 109, 128, 330, 410, 413
FspBI CTAG 1 cut(s) 426
GluI GCNGC 6 cut(s) 6, 109, 128, 330, 410, 413
Hin1II CATG 5 cut(s) 98, 108, 337, 452, 473
HincII GTYRAC 1 cut(s) 397
HindII GTYRAC 1 cut(s) 397
HindIII AAGCTT 1 cut(s) 207
HinfI GANTC 1 cut(s) 478
HphI GGTGA 1 cut(s) 205
Hpy166II GTNNAC 3 cut(s) 29, 172, 397
Hpy188III TCNNGA 1 cut(s) 475
Hpy8I GTNNAC 3 cut(s) 29, 172, 397
HpyAV CCTTC 2 cut(s) 148, 208
HpyCH4V TGCA 4 cut(s) 108, 201, 257, 337
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 39, 84, 215, 409
HpyF3I CTNAG 3 cut(s) 123, 178, 482
Hsp92II CATG 5 cut(s) 98, 108, 337, 452, 473
LmnI GCTCC 1 cut(s) 493
LpnPI CCDG 3 cut(s) 60, 165, 287
Lsp1109I GCAGC 4 cut(s) 120, 139, 316, 424
LweI GCATC 1 cut(s) 266
MaeI CTAG 1 cut(s) 426
MboII GAAGA 3 cut(s) 304, 472, 475
MfeI CAATTG 1 cut(s) 249
MhlI GDGCHC 1 cut(s) 89
MluCI AATT 2 cut(s) 67, 249
MluI ACGCGT 1 cut(s) 31
MnlI CCTC 5 cut(s) 144, 262, 335, 355, 450
MslI CAYNNNNRTG 2 cut(s) 146, 279
MunI CAATTG 1 cut(s) 249
MvnI CGCG 1 cut(s) 33
MwoI GCNNNNNNNGC 5 cut(s) 14, 39, 84, 215, 409
NlaIII CATG 5 cut(s) 98, 108, 337, 452, 473
NlaIV GGNNCC 1 cut(s) 439
NspI RCATGY 2 cut(s) 108, 473
PfeI GAWTC 1 cut(s) 478
PkrI GCNGC 6 cut(s) 7, 110, 129, 331, 411, 414
PpuMI RGGWCCY 1 cut(s) 135
Psp5II RGGWCCY 1 cut(s) 135
PspN4I GGNNCC 1 cut(s) 439
PspPI GGNCC 2 cut(s) 135, 437
PspPPI RGGWCCY 1 cut(s) 135
RseI CAYNNNNRTG 2 cut(s) 146, 279
SatI GCNGC 6 cut(s) 6, 109, 128, 330, 410, 413
Sau96I GGNCC 2 cut(s) 135, 437
SduI GDGCHC 1 cut(s) 89
SetI ASST 7 cut(s) 19, 140, 195, 211, 306, 346, 366
SfaNI GCATC 1 cut(s) 266
SinI GGWCC 2 cut(s) 135, 437
SmiMI CAYNNNNRTG 2 cut(s) 146, 279
Sse9I AATT 2 cut(s) 67, 249
SsiI CCGC 4 cut(s) 8, 409, 446, 491
SspMI CTAG 1 cut(s) 426
TasI AATT 2 cut(s) 67, 249
TauI GCSGC 1 cut(s) 412
TfiI GAWTC 1 cut(s) 478
TseI GCWGC 5 cut(s) 5, 108, 127, 329, 412
TspDTI ATGAA 1 cut(s) 130
VpaK11BI GGWCC 2 cut(s) 135, 437
XceI RCATGY 2 cut(s) 108, 473
XspI CTAG 1 cut(s) 426
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.