Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015297

Physical Location & Seq

Genomic Coordinates Forward (+)

45755683 .. 45758448

Gene Structure 2766 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G560400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 972 bp

ATGGCCTTGGTTTTGGCTATGGCTTTGGCCATGGTTTTGGCTGTGGCGCAGGAGGTTGAGGGGCAGCTTATGGTAGGTTTCTATGGTGAAACATGCCCCCAAGCCGAGCCCATTGTCCGCAACGTCGTTAGAGAAGCTATTCTCTCCGATACCAACATGGCACCAGTCTTGCTCAGGCTCCATTTTCACGACTGCTTCGTTGAGGGTTGTGATGGGTCAATTCTGATTGAGAACGGACCAAGCGGTGAGAGGCATGCATTTGGTCACCAAGGCGTTGGGGGATTTGAAGTGATAGAGAAAGCCAAGGCAGAGTTGGAGGCTGCATGCCAAGGCGTGGTTTCTTGTGCAGATATTGTGGCCTTGGCAGCTAGAGATGCTATAGCCATGGCTGGTGGACCGGCGTACGAGGTGCCTACCGGCCGGAGAGATGGGGTTGTTTCAAATATGTCTCTGGCAGATGACATGCCGGATGTTAGTAATTCAATCCAACAGCTCAAGGTTAAGTTCATGCGCAAGGGCCTTACAGAAAAGGACCTTGTCCTCCTCTCTGCTGCTCATACAATAGGGACAACGGCATGCTTCTTTTTGACCAAAAGGCTGTACAACTTCTTTCCAGGAGGGGGATCGGATCCAGCAATCAACCCCACTCTCCTCGTCGAACTAAAACAAAAGTGCCCTCAAAACGGCGACGTAAATGTGCGGTTACCCATTGACCAAGGAAGCGGGCAGGCATTTGACCTTCATATTCTGCAAAATATCAGAAATGGGTTCGCCGTGTTAGAATCCGATGCCAAGCTCAACGAGGACGCAGTGACCAGGGGTATAATGGACAATTACTTTGGTTTCTTCAGTAATCTCCCGTTCGGACCTTCTTTTGAGGCAGATTTTGTCGAAGCAATTCTAAAGATGGGCCAGATTGGTGTAAGGACAGGTTTCCAGGGTGCGCCTAGGAGAGTTTGTGCTAGCTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004601 GO:0005575 GO:0005618 GO:0005623 GO:0005911 GO:0008150 GO:0008152 GO:0009505 GO:0009506 GO:0009636 GO:0009664 GO:0009987 GO:0016043 GO:0016209 GO:0016491 GO:0016684 GO:0030054 GO:0030312 GO:0042221 GO:0044464 GO:0045229 GO:0050896 GO:0051716 GO:0055044 GO:0055114 GO:0070887 GO:0071554 GO:0071555 GO:0071669 GO:0071840 GO:0071944 GO:0097237 GO:0098754 GO:0098869 GO:1990748

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

324

Amino Acids

34.64

Weight (kDa)

5.04

Isoelectric Point (pI)

40.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015297)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25980 AT4G25980
fragaria_vesca	FvH4_4g07570 FvH4_5g30550
malus_domestica	MD08G1222600.v1.1
prunus_persica	Prupe.1G560400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0225371
rosa_laevigata	RLG00000001822
rosa_multiflora	Rmu_co8454263.1_g000001
rosa_rugosa	Rorug04G0023000 Rorug07G0229100
rosa_samantha	Rh7AG374300 Rh7BG363800 Rh7CG392500 Rh7DG375000
rosa_wichuraiana	Rw7G031630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	512
AccB1I	GGYRCC	2 cut(s)	160, 409
AccB7I	CCANNNNNTGG	1 cut(s)	334
AciI	CCGC	4 cut(s)	118, 243, 700, 723
AclWI	GGATC	3 cut(s)	623, 631, 636
AcoI	YGGCCR	2 cut(s)	27, 418
AcuI	CTGAAG	1 cut(s)	832
AfaI	GTAC	2 cut(s)	404, 602
AfiI	CCNNNNNNNGG	3 cut(s)	334, 620, 683
AgsI	TTSAA	3 cut(s)	287, 441, 483
AjnI	CCWGG	3 cut(s)	613, 815, 936
AluBI	AGCT	6 cut(s)	67, 137, 368, 493, 796, 966
AluI	AGCT	6 cut(s)	67, 137, 368, 493, 796, 966
Alw26I	GTCTC	1 cut(s)	453
AlwI	GGATC	3 cut(s)	623, 631, 636
AoxI	GGCC	6 cut(s)	3, 27, 357, 418, 517, 910
ApeKI	GCWGC	4 cut(s)	64, 320, 365, 551
ArsI	GACNNNNNNTTYG	2 cut(s)	821, 853
Asp700I	GAANNNNTTC	2 cut(s)	138, 897
AspA2I	CCTAGG	1 cut(s)	947
AspLEI	GCGC	3 cut(s)	49, 513, 946
AspS9I	GGNCC	6 cut(s)	236, 395, 517, 532, 866, 910
AsuHPI	GGTGA	3 cut(s)	98, 257, 257
AsuNHI	GCTAGC	1 cut(s)	962
AvaII	GGWCC	4 cut(s)	236, 395, 532, 866
AvrII	CCTAGG	1 cut(s)	947
BaeGI	GKGCMC	1 cut(s)	677
BalI	TGGCCA	1 cut(s)	29
BamHI	GGATCC	1 cut(s)	628
BanI	GGYRCC	2 cut(s)	160, 409
BanII	GRGCYC	1 cut(s)	111
BbvI	GCAGC	4 cut(s)	76, 307, 377, 538
BccI	CCATC	3 cut(s)	206, 422, 901
BceAI	ACGGC	3 cut(s)	588, 700, 758
BciT130I	CCWGG	3 cut(s)	615, 817, 938
BcoDI	GTCTC	1 cut(s)	453
BfaI	CTAG	3 cut(s)	369, 948, 963
BfmI	CTRYAG	1 cut(s)	378
BisI	GCNGC	4 cut(s)	65, 321, 366, 552
BlnI	CCTAGG	1 cut(s)	947
BlsI	GCNGC	4 cut(s)	66, 322, 367, 553
Bme1390I	CCNGG	3 cut(s)	615, 817, 938
Bme18I	GGWCC	4 cut(s)	236, 395, 532, 866
BmgT120I	GGNCC	6 cut(s)	236, 395, 517, 532, 866, 910
BmiI	GGNNCC	4 cut(s)	162, 179, 411, 630
BmrFI	CCNGG	3 cut(s)	615, 817, 938
BmsI	GCATC	2 cut(s)	364, 778
BmtI	GCTAGC	1 cut(s)	966
Bpu10I	CCTNAGC	1 cut(s)	173
BpuEI	CTTGAG	1 cut(s)	479
BsaXI	ACNNNNNCTCC	1 cut(s)	943
Bsc4I	CCNNNNNNNGG	3 cut(s)	334, 620, 683
Bse118I	RCCGGY	2 cut(s)	397, 416
Bse1I	ACTGG	1 cut(s)	164
BseBI	CCWGG	3 cut(s)	615, 817, 938
BseGI	GGATG	1 cut(s)	475
BseLI	CCNNNNNNNGG	3 cut(s)	334, 620, 683
BseMII	CTCAG	1 cut(s)	187
BseNI	ACTGG	1 cut(s)	164
BseRI	GAGGAG	2 cut(s)	533, 641
BseSI	GKGCMC	1 cut(s)	677
BseX3I	CGGCCG	1 cut(s)	418
BseXI	GCAGC	4 cut(s)	76, 307, 377, 538
BsgI	GTGCAG	1 cut(s)	366
Bsh1285I	CGRYCG	1 cut(s)	421
BshFI	GGCC	6 cut(s)	5, 29, 359, 420, 519, 912
BshNI	GGYRCC	2 cut(s)	160, 409
BsiEI	CGRYCG	1 cut(s)	421
BsiSI	CCGG	4 cut(s)	398, 417, 421, 467
BsiWI	CGTACG	1 cut(s)	402
BslFI	GGGAC	1 cut(s)	580
BslI	CCNNNNNNNGG	3 cut(s)	334, 620, 683
BsmAI	GTCTC	1 cut(s)	453
BsmFI	GGGAC	1 cut(s)	580
BsnI	GGCC	6 cut(s)	5, 29, 359, 420, 519, 912
Bsp1286I	GDGCHC	2 cut(s)	111, 677
Bsp1407I	TGTACA	1 cut(s)	600
Bsp143I	GATC	2 cut(s)	623, 628
Bsp19I	CCATGG	2 cut(s)	30, 384
BspACI	CCGC	4 cut(s)	118, 243, 700, 723
BspANI	GGCC	6 cut(s)	5, 29, 359, 420, 519, 912
BspCNI	CTCAG	1 cut(s)	186
BspLI	GGNNCC	4 cut(s)	162, 179, 411, 630
BspOI	GCTAGC	1 cut(s)	966
BspPI	GGATC	3 cut(s)	623, 631, 636
BspT107I	GGYRCC	2 cut(s)	160, 409
BsrFI	RCCGGY	2 cut(s)	397, 416
BsrGI	TGTACA	1 cut(s)	600
BsrI	ACTGG	1 cut(s)	164
BssAI	RCCGGY	2 cut(s)	397, 416
BssMI	GATC	2 cut(s)	623, 628
BssT1I	CCWWGG	9 cut(s)	6, 30, 268, 303, 328, 360, 384, 715, 947
Bst2UI	CCWGG	3 cut(s)	615, 817, 938
BstAUI	TGTACA	1 cut(s)	600
BstC8I	GCNNGC	6 cut(s)	255, 325, 577, 725, 729, 964
BstDEI	CTNAG	1 cut(s)	173
BstDSI	CCRYGG	2 cut(s)	30, 384
BstEII	GGTNACC	2 cut(s)	263, 702
BstF5I	GGATG	1 cut(s)	475
BstHHI	GCGC	3 cut(s)	49, 513, 946
BstKTI	GATC	2 cut(s)	626, 631
BstMAI	GTCTC	1 cut(s)	453
BstMBI	GATC	2 cut(s)	623, 628
BstMCI	CGRYCG	1 cut(s)	421
BstMWI	GCNNNNNNNGC	2 cut(s)	365, 374
BstNI	CCWGG	3 cut(s)	615, 817, 938
BstNSI	RCATGY	5 cut(s)	96, 257, 327, 466, 579
BstPI	GGTNACC	2 cut(s)	263, 702
BstSCI	CCNGG	3 cut(s)	613, 815, 936
BstSFI	CTRYAG	1 cut(s)	378
BstSLI	GKGCMC	1 cut(s)	677
BstV1I	GCAGC	4 cut(s)	76, 307, 377, 538
BstX2I	RGATCY	1 cut(s)	628
BstXI	CCANNNNNNTGG	2 cut(s)	37, 275
BstYI	RGATCY	1 cut(s)	628
BstZI	CGGCCG	1 cut(s)	418
BsuRI	GGCC	6 cut(s)	5, 29, 359, 420, 519, 912
BtgI	CCRYGG	2 cut(s)	30, 384
BtsCI	GGATG	1 cut(s)	475
BtsI	GCAGTG	1 cut(s)	816
BtsIMutI	CAGTG	1 cut(s)	816
Cac8I	GCNNGC	6 cut(s)	255, 325, 577, 725, 729, 964
CfoI	GCGC	3 cut(s)	49, 513, 946
Cfr10I	RCCGGY	2 cut(s)	397, 416
Cfr13I	GGNCC	6 cut(s)	236, 395, 517, 532, 866, 910
CseI	GACGC	1 cut(s)	815
Csp6I	GTAC	2 cut(s)	403, 601
CviAII	CATG	9 cut(s)	31, 93, 157, 254, 324, 385, 463, 508, 576
CviQI	GTAC	2 cut(s)	403, 601
DdeI	CTNAG	1 cut(s)	173
DpnI	GATC	2 cut(s)	625, 630
DpnII	GATC	2 cut(s)	623, 628
EaeI	YGGCCR	2 cut(s)	27, 418
EagI	CGGCCG	1 cut(s)	418
EclXI	CGGCCG	1 cut(s)	418
Eco130I	CCWWGG	9 cut(s)	6, 30, 268, 303, 328, 360, 384, 715, 947
Eco24I	GRGCYC	1 cut(s)	111
Eco47I	GGWCC	4 cut(s)	236, 395, 532, 866
Eco52I	CGGCCG	1 cut(s)	418
Eco57I	CTGAAG	1 cut(s)	832
Eco91I	GGTNACC	2 cut(s)	263, 702
EcoO109I	RGGNCCY	2 cut(s)	517, 532
EcoO65I	GGTNACC	2 cut(s)	263, 702
EcoRII	CCWGG	3 cut(s)	613, 815, 936
EcoT14I	CCWWGG	9 cut(s)	6, 30, 268, 303, 328, 360, 384, 715, 947
EcoT22I	ATGCAT	1 cut(s)	259
EcoT38I	GRGCYC	1 cut(s)	111
ErhI	CCWWGG	9 cut(s)	6, 30, 268, 303, 328, 360, 384, 715, 947
FaeI	CATG	9 cut(s)	34, 96, 160, 257, 327, 388, 466, 511, 579
FaqI	GGGAC	1 cut(s)	580
FatI	CATG	9 cut(s)	30, 92, 156, 253, 323, 384, 462, 507, 575
FauI	CCCGC	1 cut(s)	716
Fnu4HI	GCNGC	4 cut(s)	65, 321, 366, 552
FokI	GGATG	1 cut(s)	482
FriOI	GRGCYC	1 cut(s)	111
Fsp4HI	GCNGC	4 cut(s)	65, 321, 366, 552
FspBI	CTAG	3 cut(s)	369, 948, 963
FspI	TGCGCA	1 cut(s)	512
GlaI	GCGC	3 cut(s)	48, 512, 945
GluI	GCNGC	4 cut(s)	65, 321, 366, 552
HaeIII	GGCC	6 cut(s)	5, 29, 359, 420, 519, 912
HapII	CCGG	4 cut(s)	398, 417, 421, 467
HgaI	GACGC	1 cut(s)	815
HhaI	GCGC	3 cut(s)	49, 513, 946
Hin1II	CATG	9 cut(s)	34, 96, 160, 257, 327, 388, 466, 511, 579
Hin6I	GCGC	3 cut(s)	47, 511, 944
HinP1I	GCGC	3 cut(s)	47, 511, 944
HinfI	GANTC	1 cut(s)	782
HpaII	CCGG	4 cut(s)	398, 417, 421, 467
HphI	GGTGA	3 cut(s)	98, 257, 257
Hpy166II	GTNNAC	1 cut(s)	395
Hpy188I	TCNGA	6 cut(s)	148, 225, 628, 761, 787, 866
Hpy188III	TCNNGA	1 cut(s)	188
Hpy8I	GTNNAC	1 cut(s)	395
Hpy99I	CGWCG	3 cut(s)	128, 659, 692
HpyAV	CCTTC	2 cut(s)	749, 879
HpyCH4IV	ACGT	2 cut(s)	123, 690
HpyCH4V	TGCA	4 cut(s)	257, 323, 347, 751
HpyF10VI	GCNNNNNNNGC	2 cut(s)	365, 374
HpyF3I	CTNAG	1 cut(s)	173
HpySE526I	ACGT	2 cut(s)	123, 690
Hsp92II	CATG	9 cut(s)	34, 96, 160, 257, 327, 388, 466, 511, 579
HspAI	GCGC	3 cut(s)	47, 511, 944
Kzo9I	GATC	2 cut(s)	623, 628
LmnI	GCTCC	1 cut(s)	183
Lsp1109I	GCAGC	4 cut(s)	76, 307, 377, 538
LweI	GCATC	2 cut(s)	364, 778
MaeI	CTAG	3 cut(s)	369, 948, 963
MaeII	ACGT	2 cut(s)	123, 690
MaeIII	GTNAC	3 cut(s)	263, 702, 811
MalI	GATC	2 cut(s)	625, 630
MboI	GATC	2 cut(s)	623, 628
MboII	GAAGA	1 cut(s)	838
MflI	RGATCY	1 cut(s)	628
MhlI	GDGCHC	2 cut(s)	111, 677
MlsI	TGGCCA	1 cut(s)	29
MluCI	AATT	4 cut(s)	219, 478, 832, 897
MluNI	TGGCCA	1 cut(s)	29
MmeI	TCCRAC	2 cut(s)	294, 511
Mox20I	TGGCCA	1 cut(s)	29
Mph1103I	ATGCAT	1 cut(s)	259
MroXI	GAANNNNTTC	2 cut(s)	138, 897
MscI	TGGCCA	1 cut(s)	29
MseI	TTAA	1 cut(s)	501
Msp20I	TGGCCA	1 cut(s)	29
MspI	CCGG	4 cut(s)	398, 417, 421, 467
MspR9I	CCNGG	3 cut(s)	615, 817, 938
MvaI	CCWGG	3 cut(s)	615, 817, 938
MwoI	GCNNNNNNNGC	2 cut(s)	365, 374
NcoI	CCATGG	2 cut(s)	30, 384
NdeII	GATC	2 cut(s)	623, 628
NheI	GCTAGC	1 cut(s)	962
NlaIII	CATG	9 cut(s)	34, 96, 160, 257, 327, 388, 466, 511, 579
NlaIV	GGNNCC	4 cut(s)	162, 179, 411, 630
NmeAIII	GCCGAG	1 cut(s)	130
NmuCI	GTSAC	2 cut(s)	263, 811
NsbI	TGCGCA	1 cut(s)	512
NsiI	ATGCAT	1 cut(s)	259
NspI	RCATGY	5 cut(s)	96, 257, 327, 466, 579
PaeI	GCATGC	3 cut(s)	257, 327, 579
PcsI	WCGNNNNNNNCGW	1 cut(s)	195
PdmI	GAANNNNTTC	2 cut(s)	138, 897
PfeI	GAWTC	1 cut(s)	782
Pfl23II	CGTACG	1 cut(s)	402
PflFI	GACNNNGTC	1 cut(s)	536
PflMI	CCANNNNNTGG	1 cut(s)	334
PfoI	TCCNGGA	1 cut(s)	613
PkrI	GCNGC	4 cut(s)	66, 322, 367, 553
PpuMI	RGGWCCY	1 cut(s)	532
Psp5II	RGGWCCY	1 cut(s)	532
Psp6I	CCWGG	3 cut(s)	613, 815, 936
PspEI	GGTNACC	2 cut(s)	263, 702
PspGI	CCWGG	3 cut(s)	613, 815, 936
PspLI	CGTACG	1 cut(s)	402
PspN4I	GGNNCC	4 cut(s)	162, 179, 411, 630
PspPI	GGNCC	6 cut(s)	236, 395, 517, 532, 866, 910
PspPPI	RGGWCCY	1 cut(s)	532
PsuI	RGATCY	1 cut(s)	628
PsyI	GACNNNGTC	1 cut(s)	536
RsaI	GTAC	2 cut(s)	404, 602
RsaNI	GTAC	2 cut(s)	403, 601
SaqAI	TTAA	1 cut(s)	501
SatI	GCNGC	4 cut(s)	65, 321, 366, 552
Sau3AI	GATC	2 cut(s)	623, 628
Sau96I	GGNCC	6 cut(s)	236, 395, 517, 532, 866, 910
ScrFI	CCNGG	3 cut(s)	615, 817, 938
SduI	GDGCHC	2 cut(s)	111, 677
SfaNI	GCATC	2 cut(s)	364, 778
SfcI	CTRYAG	1 cut(s)	378
SinI	GGWCC	4 cut(s)	236, 395, 532, 866
SmlI	CTYRAG	1 cut(s)	494
SmoI	CTYRAG	1 cut(s)	494
SphI	GCATGC	3 cut(s)	257, 327, 579
Sse9I	AATT	4 cut(s)	219, 478, 832, 897
SsiI	CCGC	4 cut(s)	118, 243, 700, 723
SspMI	CTAG	3 cut(s)	369, 948, 963
StyD4I	CCNGG	3 cut(s)	613, 815, 936
StyI	CCWWGG	9 cut(s)	6, 30, 268, 303, 328, 360, 384, 715, 947
TaiI	ACGT	2 cut(s)	126, 693
TaqI	TCGA	2 cut(s)	657, 891
TasI	AATT	4 cut(s)	219, 478, 832, 897
TatI	WGTACW	1 cut(s)	600
TfiI	GAWTC	1 cut(s)	782
Tru1I	TTAA	1 cut(s)	501
Tru9I	TTAA	1 cut(s)	501
TscAI	CASTG	1 cut(s)	816
TseFI	GTSAC	2 cut(s)	263, 811
TseI	GCWGC	4 cut(s)	64, 320, 365, 551
Tsp45I	GTSAC	2 cut(s)	263, 811
TspDTI	ATGAA	2 cut(s)	496, 731
TspGWI	ACGGA	1 cut(s)	249
TspRI	CASTG	1 cut(s)	816
Tth111I	GACNNNGTC	1 cut(s)	536
Van91I	CCANNNNNTGG	1 cut(s)	334
VpaK11BI	GGWCC	4 cut(s)	236, 395, 532, 866
XceI	RCATGY	5 cut(s)	96, 257, 327, 466, 579
XcmI	CCANNNNNNNNNTGG	2 cut(s)	310, 823
XmaJI	CCTAGG	1 cut(s)	947
XmnI	GAANNNNTTC	2 cut(s)	138, 897
XspI	CTAG	3 cut(s)	369, 948, 963
Zsp2I	ATGCAT	1 cut(s)	259

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.