Prupe.1G561800_v2.0.a1

Cyclic pyranopterin monophosphate synthase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
45890662 .. 45896845
6184 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G561800.1

Sequence Viewer

Length: 1356 bp
ATGGCAAAGGCATTCCGCTACTGCCAGCGCGCAAGCCAAAGCGGCCTTTCGACGCTTGAAGAGAAAAGAAGGCAACAAAACTCACTCATATTACATATAAAACTGCCTTCTGCTTTCGAATCGTCTTATGTTTCCGTCGTTTCAAACACAAATATGATGAAGCGTCACGTATTCAAGTTTGCCCGCTCGCGTATGGGCTTTGCAGATTTCAATTGCTTCCTGGCGGACTTCGAAACTGGGTTTTGTTCCACCTCCAGAAACAGTGATTCTAAGGGTTTACTTCGTCATCAAATGAATGCATCCACACCAAGGATGTGCTCGACTTCTTGTGCTAAGGTACCAGAAGATCTTCCAAAAGACAACCCTGTTTCTGATATGTTGCTTGATTCATTTGGAAGGCTCCACACTTACTTGAGGATCTCCCTGACAGAACGTTGCAATCTGCGATGTCAATACTGTATGCCAGCAGAGGGTGTGGACCTCACTCCCAGCCCTAAAATCCTTTCACAGAATGAGATTGTTCGCTTGGCAAATCTGTTTGTAAGCTCAGGAGTGGAAAAAATTCGTTTGACTGGAGGGGAGCCAACCATAAGGAAAGATATCGAAGACATATGCTTACACTTGTCTAACTTGAATGGATTAAAAACACTGGCCATAACCACCAATGGAATTACTCTTGCAAGAAAACTTCCCAAGCTGAAAGAATGTGGGCTTACTTCTGTGAATATTAGTTTAGACACGTTGGTCCCTGCAAAGTTTGAATTTATGACCAGGCGTAAAGGGCATCAAAAGGTTATGGAATCAATTAATGCTGCCATAAACCTTGGATATAATCCTGTTAAGGTAAATTGTGTGGTGATGCGTGGATTCAATGATGATGAGATTTGTGATTTTGTAGAGCTGACACGTGATAAACCGATTAATATTCGATTTATTGAATTCATGCCTTTTGATGGAAATGTTTGGAATGTTAAAAAACTGGTACCCTACTCGGAAATGTTGGATAGAGTGGTAAAACGGTTTCCAAGTCTAAAGAGACTTCAGGATCACCCAACAGATACGGCCAAGAATTTCAGGATAGATGAGCATGCTGGTGTAGTTTCTTTTATCACATCAATGACTGAGCATTTTTGTGCTGGATGCAATAGATTGCGACTCTTAGCTGATGGAAACTTCAAAGTCTGCTTATTTGGTCCTTCTGAGGTGAGCTTAAGAGATCCCCTTCGTCAGGGTGCTAATGATCATGAACTCAGGGAAATAATCGGGTCAGCGGTGAAGAGGAAGAAAGCTTCACACGCTGGTATGTTTGACATTGCAAAGACAGCAAATAGGCCAATGATACATATTGGTGGCTAA

Protein Analysis

452

Amino Acids

50.77

Weight (kDa)

9.3

Isoelectric Point (pI)

43.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 743
Acc65I GGTACC 2 cut(s) 337, 982
AccB1I GGYRCC 2 cut(s) 337, 982
AccBSI CCGCTC 1 cut(s) 186
AccII CGCG 2 cut(s) 30, 190
AciI CCGC 5 cut(s) 16, 42, 184, 224, 1271
AclI AACGTT 1 cut(s) 433
AclWI GGATC 3 cut(s) 425, 1053, 1211
AcoI YGGCCR 2 cut(s) 651, 1062
AcsI RAATTY 4 cut(s) 561, 761, 938, 1069
AcuI CTGAAG 1 cut(s) 1025
AcvI CACGTG 1 cut(s) 908
AfaI GTAC 2 cut(s) 339, 984
AfiI CCNNNNNNNGG 4 cut(s) 309, 470, 953, 1228
AflII CTTAAG 1 cut(s) 1210
AflIII ACRYGT 2 cut(s) 738, 905
AgsI TTSAA 9 cut(s) 59, 144, 175, 211, 634, 761, 871, 938, 1177
AjnI CCWGG 2 cut(s) 219, 770
AluBI AGCT 6 cut(s) 546, 697, 901, 1163, 1209, 1289
AluI AGCT 6 cut(s) 546, 697, 901, 1163, 1209, 1289
Alw21I GWGCWC 1 cut(s) 320
Alw26I GTCTC 1 cut(s) 1030
AlwI GGATC 3 cut(s) 425, 1053, 1211
AoxI GGCC 4 cut(s) 43, 651, 1062, 1331
ApeKI GCWGC 1 cut(s) 812
ApoI RAATTY 4 cut(s) 561, 761, 938, 1069
AseI ATTAAT 2 cut(s) 807, 921
Asp700I GAANNNNTTC 2 cut(s) 348, 561
Asp718I GGTACC 2 cut(s) 337, 982
AspLEI GCGC 2 cut(s) 30, 32
AspS9I GGNCC 3 cut(s) 478, 745, 1193
AsuHPI GGTGA 4 cut(s) 868, 1040, 1216, 1285
AsuII TTCGAA 2 cut(s) 117, 231
AvaII GGWCC 3 cut(s) 478, 745, 1193
BalI TGGCCA 1 cut(s) 653
BanI GGYRCC 2 cut(s) 337, 982
BbrPI CACGTG 1 cut(s) 908
BbsI GAAGAC 1 cut(s) 612
Bbv12I GWGCWC 1 cut(s) 320
BbvI GCAGC 1 cut(s) 799
BccI CCATC 2 cut(s) 947, 1160
BceAI ACGGC 1 cut(s) 1077
BciT130I CCWGG 2 cut(s) 221, 772
BclI TGATCA 1 cut(s) 1240
BcoDI GTCTC 1 cut(s) 1030
BfrI CTTAAG 1 cut(s) 1210
BglI GCCNNNNNGGC 1 cut(s) 42
BglII AGATCT 1 cut(s) 346
BisI GCNGC 2 cut(s) 43, 813
BlsI GCNGC 2 cut(s) 44, 814
Bme1390I CCNGG 2 cut(s) 221, 772
Bme18I GGWCC 3 cut(s) 478, 745, 1193
BmgT120I GGNCC 3 cut(s) 478, 745, 1193
BmiI GGNNCC 5 cut(s) 339, 401, 582, 747, 984
BmrFI CCNGG 2 cut(s) 221, 772
BmrI ACTGGG 1 cut(s) 246
BmsI GCATC 4 cut(s) 308, 793, 849, 1130
BmuI ACTGGG 1 cut(s) 246
BpiI GAAGAC 1 cut(s) 612
BpmI CTGGAG 2 cut(s) 238, 594
Bpu10I CCTNAGC 2 cut(s) 333, 547
Bpu14I TTCGAA 2 cut(s) 117, 231
BpuEI CTTGAG 1 cut(s) 433
BsaAI YACGTR 2 cut(s) 169, 908
BsaJI CCNNGG 2 cut(s) 308, 823
Bsc4I CCNNNNNNNGG 4 cut(s) 309, 470, 953, 1228
Bse1I ACTGG 4 cut(s) 241, 577, 654, 984
Bse3DI GCAATG 1 cut(s) 1311
BseBI CCWGG 2 cut(s) 221, 772
BseDI CCNNGG 2 cut(s) 308, 823
BseGI GGATG 3 cut(s) 299, 318, 1145
BseLI CCNNNNNNNGG 4 cut(s) 309, 470, 953, 1228
BseMI GCAATG 1 cut(s) 1311
BseMII CTCAG 4 cut(s) 561, 1113, 1191, 1264
BseNI ACTGG 4 cut(s) 241, 577, 654, 984
BsePI GCGCGC 1 cut(s) 28
BseXI GCAGC 1 cut(s) 799
BseYI CCCAGC 1 cut(s) 488
Bsh1236I CGCG 2 cut(s) 30, 190
BshFI GGCC 4 cut(s) 45, 653, 1064, 1333
BshNI GGYRCC 2 cut(s) 337, 982
BsiHKAI GWGCWC 1 cut(s) 320
BslFI GGGAC 1 cut(s) 731
BslI CCNNNNNNNGG 4 cut(s) 309, 470, 953, 1228
BsmAI GTCTC 1 cut(s) 1030
BsmFI GGGAC 1 cut(s) 731
BsmI GAATGC 2 cut(s) 11, 301
BsnI GGCC 4 cut(s) 45, 653, 1064, 1333
Bsp119I TTCGAA 2 cut(s) 117, 231
Bsp1286I GDGCHC 1 cut(s) 320
Bsp143I GATC 5 cut(s) 346, 417, 1045, 1216, 1240
BspACI CCGC 5 cut(s) 16, 42, 184, 224, 1271
BspANI GGCC 4 cut(s) 45, 653, 1064, 1333
BspCNI CTCAG 4 cut(s) 560, 1114, 1192, 1263
BspFNI CGCG 2 cut(s) 30, 190
BspHI TCATGA 1 cut(s) 1243
BspLI GGNNCC 5 cut(s) 339, 401, 582, 747, 984
BspPI GGATC 3 cut(s) 425, 1053, 1211
BspT104I TTCGAA 2 cut(s) 117, 231
BspT107I GGYRCC 2 cut(s) 337, 982
BspTI CTTAAG 1 cut(s) 1210
BsrBI CCGCTC 1 cut(s) 186
BsrDI GCAATG 1 cut(s) 1311
BsrI ACTGG 4 cut(s) 241, 577, 654, 984
BssECI CCNNGG 2 cut(s) 308, 823
BssHII GCGCGC 1 cut(s) 28
BssMI GATC 5 cut(s) 346, 417, 1045, 1216, 1240
BssT1I CCWWGG 2 cut(s) 308, 823
Bst2UI CCWGG 2 cut(s) 221, 772
Bst4CI ACNGT 3 cut(s) 263, 458, 1020
Bst6I CTCTTC 2 cut(s) 54, 1271
BstAFI CTTAAG 1 cut(s) 1210
BstBAI YACGTR 2 cut(s) 169, 908
BstBI TTCGAA 2 cut(s) 117, 231
BstC8I GCNNGC 7 cut(s) 26, 30, 34, 184, 188, 465, 1089
BstDEI CTNAG 7 cut(s) 270, 333, 547, 1122, 1159, 1200, 1250
BstENI CCTNNNNNAGG 1 cut(s) 1226
BstF5I GGATG 3 cut(s) 299, 318, 1145
BstFNI CGCG 2 cut(s) 30, 190
BstHHI GCGC 2 cut(s) 30, 32
BstKTI GATC 5 cut(s) 349, 420, 1048, 1219, 1243
BstMAI GTCTC 1 cut(s) 1030
BstMBI GATC 5 cut(s) 346, 417, 1045, 1216, 1240
BstMWI GCNNNNNNNGC 4 cut(s) 42, 781, 1295, 1322
BstNI CCWGG 2 cut(s) 221, 772
BstNSI RCATGY 1 cut(s) 1091
BstSCI CCNGG 2 cut(s) 219, 770
BstUI CGCG 2 cut(s) 30, 190
BstV1I GCAGC 1 cut(s) 799
BstV2I GAAGAC 1 cut(s) 612
BstX2I RGATCY 3 cut(s) 346, 417, 1216
BstYI RGATCY 3 cut(s) 346, 417, 1216
BsuRI GGCC 4 cut(s) 45, 653, 1064, 1333
BtgZI GCGATG 1 cut(s) 460
BtsCI GGATG 3 cut(s) 299, 318, 1145
BtsIMutI CAGTG 2 cut(s) 268, 647
Cac8I GCNNGC 7 cut(s) 26, 30, 34, 184, 188, 465, 1089
CciI TCATGA 1 cut(s) 1243
CfoI GCGC 2 cut(s) 30, 32
Cfr13I GGNCC 3 cut(s) 478, 745, 1193
CseI GACGC 2 cut(s) 61, 152
Csp6I GTAC 2 cut(s) 338, 983
CviAII CATG 3 cut(s) 943, 1088, 1244
CviQI GTAC 2 cut(s) 338, 983
DdeI CTNAG 7 cut(s) 270, 333, 547, 1122, 1159, 1200, 1250
DpnI GATC 5 cut(s) 348, 419, 1047, 1218, 1242
DpnII GATC 5 cut(s) 346, 417, 1045, 1216, 1240
DrdI GACNNNNNNGTC 1 cut(s) 743
DseDI GACNNNNNNGTC 1 cut(s) 743
EaeI YGGCCR 2 cut(s) 651, 1062
Eam1104I CTCTTC 2 cut(s) 54, 1271
EarI CTCTTC 2 cut(s) 54, 1271
EciI GGCGGA 1 cut(s) 239
Eco130I CCWWGG 2 cut(s) 308, 823
Eco32I GATATC 1 cut(s) 601
Eco47I GGWCC 3 cut(s) 478, 745, 1193
Eco57I CTGAAG 1 cut(s) 1025
Eco72I CACGTG 1 cut(s) 908
EcoNI CCTNNNNNAGG 1 cut(s) 1226
EcoRI GAATTC 1 cut(s) 938
EcoRII CCWGG 2 cut(s) 219, 770
EcoRV GATATC 1 cut(s) 601
EcoT14I CCWWGG 2 cut(s) 308, 823
EcoT22I ATGCAT 1 cut(s) 301
ErhI CCWWGG 2 cut(s) 308, 823
FaeI CATG 3 cut(s) 946, 1091, 1247
FaqI GGGAC 1 cut(s) 731
FatI CATG 3 cut(s) 942, 1087, 1243
FauI CCCGC 1 cut(s) 191
FauNDI CATATG 1 cut(s) 611
FbaI TGATCA 1 cut(s) 1240
Fnu4HI GCNGC 2 cut(s) 43, 813
FokI GGATG 3 cut(s) 286, 325, 1152
Fsp4HI GCNGC 2 cut(s) 43, 813
GlaI GCGC 2 cut(s) 29, 31
GluI GCNGC 2 cut(s) 43, 813
GsaI CCCAGC 1 cut(s) 492
GsuI CTGGAG 2 cut(s) 238, 594
HaeIII GGCC 4 cut(s) 45, 653, 1064, 1333
HgaI GACGC 2 cut(s) 61, 152
HhaI GCGC 2 cut(s) 30, 32
Hin1II CATG 3 cut(s) 946, 1091, 1247
Hin6I GCGC 2 cut(s) 28, 30
HinP1I GCGC 2 cut(s) 28, 30
HindIII AAGCTT 1 cut(s) 1287
HinfI GANTC 6 cut(s) 119, 266, 386, 800, 867, 1155
HphI GGTGA 4 cut(s) 868, 1040, 1216, 1285
Hpy166II GTNNAC 2 cut(s) 278, 478
Hpy188I TCNGA 3 cut(s) 373, 994, 1201
Hpy188III TCNNGA 5 cut(s) 255, 549, 1043, 1075, 1244
Hpy8I GTNNAC 2 cut(s) 278, 478
Hpy99I CGWCG 2 cut(s) 55, 140
HpyAV CCTTC 5 cut(s) 63, 117, 390, 1206, 1232
HpyCH4III ACNGT 3 cut(s) 263, 458, 1020
HpyCH4IV ACGT 4 cut(s) 168, 433, 740, 907
HpyCH4V TGCA 7 cut(s) 203, 299, 438, 680, 752, 1143, 1316
HpyF10VI GCNNNNNNNGC 4 cut(s) 42, 781, 1295, 1322
HpyF3I CTNAG 7 cut(s) 270, 333, 547, 1122, 1159, 1200, 1250
HpySE526I ACGT 4 cut(s) 168, 433, 740, 907
Hsp92II CATG 3 cut(s) 946, 1091, 1247
HspAI GCGC 2 cut(s) 28, 30
KpnI GGTACC 2 cut(s) 341, 986
Ksp22I TGATCA 1 cut(s) 1240
Kzo9I GATC 5 cut(s) 346, 417, 1045, 1216, 1240
LmnI GCTCC 2 cut(s) 405, 580
Lsp1109I GCAGC 1 cut(s) 799
LweI GCATC 4 cut(s) 308, 793, 849, 1130
MaeII ACGT 4 cut(s) 168, 433, 740, 907
MaeIII GTNAC 1 cut(s) 164
MalI GATC 5 cut(s) 348, 419, 1047, 1218, 1242
MbiI CCGCTC 1 cut(s) 186
MboI GATC 5 cut(s) 346, 417, 1045, 1216, 1240
MboII GAAGA 6 cut(s) 71, 341, 356, 617, 1288, 1294
MfeI CAATTG 1 cut(s) 211
MflI RGATCY 3 cut(s) 346, 417, 1216
MhlI GDGCHC 1 cut(s) 320
MlsI TGGCCA 1 cut(s) 653
MluCI AATT 8 cut(s) 211, 561, 669, 761, 804, 847, 938, 1069
MluNI TGGCCA 1 cut(s) 653
MlyI GAGTC 1 cut(s) 1149
MmeI TCCRAC 1 cut(s) 981
MnlI CCTC 7 cut(s) 262, 408, 463, 491, 569, 1195, 1272
Mox20I TGGCCA 1 cut(s) 653
Mph1103I ATGCAT 1 cut(s) 301
MroXI GAANNNNTTC 2 cut(s) 348, 561
MscI TGGCCA 1 cut(s) 653
MseI TTAA 6 cut(s) 641, 807, 840, 921, 972, 1211
MslI CAYNNNNRTG 5 cut(s) 152, 1092, 1115, 1131, 1347
Msp20I TGGCCA 1 cut(s) 653
MspA1I CMGCKG 1 cut(s) 1271
MspCI CTTAAG 1 cut(s) 1210
MspR9I CCNGG 2 cut(s) 221, 772
MunI CAATTG 1 cut(s) 211
Mva1269I GAATGC 2 cut(s) 11, 301
MvaI CCWGG 2 cut(s) 221, 772
MvnI CGCG 2 cut(s) 30, 190
MwoI GCNNNNNNNGC 4 cut(s) 42, 781, 1295, 1322
NdeI CATATG 1 cut(s) 611
NdeII GATC 5 cut(s) 346, 417, 1045, 1216, 1240
NlaIII CATG 3 cut(s) 946, 1091, 1247
NlaIV GGNNCC 5 cut(s) 339, 401, 582, 747, 984
NmuCI GTSAC 1 cut(s) 164
NsiI ATGCAT 1 cut(s) 301
NspI RCATGY 1 cut(s) 1091
NspV TTCGAA 2 cut(s) 117, 231
PaeI GCATGC 1 cut(s) 1091
PagI TCATGA 1 cut(s) 1243
PauI GCGCGC 1 cut(s) 28
PctI GAATGC 2 cut(s) 11, 301
PdmI GAANNNNTTC 2 cut(s) 348, 561
PfeI GAWTC 5 cut(s) 119, 266, 386, 800, 867
PkrI GCNGC 2 cut(s) 44, 814
PleI GAGTC 1 cut(s) 1149
PmaCI CACGTG 1 cut(s) 908
PmlI CACGTG 1 cut(s) 908
PpsI GAGTC 1 cut(s) 1149
Ppu21I YACGTR 2 cut(s) 169, 908
PshBI ATTAAT 2 cut(s) 807, 921
Psp1406I AACGTT 1 cut(s) 433
Psp6I CCWGG 2 cut(s) 219, 770
PspCI CACGTG 1 cut(s) 908
PspFI CCCAGC 1 cut(s) 488
PspGI CCWGG 2 cut(s) 219, 770
PspN4I GGNNCC 5 cut(s) 339, 401, 582, 747, 984
PspPI GGNCC 3 cut(s) 478, 745, 1193
PsuI RGATCY 3 cut(s) 346, 417, 1216
PteI GCGCGC 1 cut(s) 28
RsaI GTAC 2 cut(s) 339, 984
RsaNI GTAC 2 cut(s) 338, 983
RseI CAYNNNNRTG 5 cut(s) 152, 1092, 1115, 1131, 1347
SaqAI TTAA 6 cut(s) 641, 807, 840, 921, 972, 1211
SatI GCNGC 2 cut(s) 43, 813
Sau3AI GATC 5 cut(s) 346, 417, 1045, 1216, 1240
Sau96I GGNCC 3 cut(s) 478, 745, 1193
SchI GAGTC 1 cut(s) 1149
ScrFI CCNGG 2 cut(s) 221, 772
SduI GDGCHC 1 cut(s) 320
SfaNI GCATC 4 cut(s) 308, 793, 849, 1130
SfuI TTCGAA 2 cut(s) 117, 231
SinI GGWCC 3 cut(s) 478, 745, 1193
SmiMI CAYNNNNRTG 5 cut(s) 152, 1092, 1115, 1131, 1347
SmlI CTYRAG 2 cut(s) 412, 1210
SmoI CTYRAG 2 cut(s) 412, 1210
SphI GCATGC 1 cut(s) 1091
Sse9I AATT 8 cut(s) 211, 561, 669, 761, 804, 847, 938, 1069
SsiI CCGC 5 cut(s) 16, 42, 184, 224, 1271
SspI AATATT 2 cut(s) 727, 925
StyD4I CCNGG 2 cut(s) 219, 770
StyI CCWWGG 2 cut(s) 308, 823
TaaI ACNGT 3 cut(s) 263, 458, 1020
TaiI ACGT 4 cut(s) 171, 436, 743, 910
TaqI TCGA 6 cut(s) 50, 117, 231, 320, 603, 928
TasI AATT 8 cut(s) 211, 561, 669, 761, 804, 847, 938, 1069
TauI GCSGC 1 cut(s) 45
TfiI GAWTC 5 cut(s) 119, 266, 386, 800, 867
Tru1I TTAA 6 cut(s) 641, 807, 840, 921, 972, 1211
Tru9I TTAA 6 cut(s) 641, 807, 840, 921, 972, 1211
TscAI CASTG 2 cut(s) 268, 654
TseFI GTSAC 1 cut(s) 164
TseI GCWGC 1 cut(s) 812
Tsp45I GTSAC 1 cut(s) 164
TspDTI ATGAA 5 cut(s) 173, 308, 378, 931, 1260
TspGWI ACGGA 1 cut(s) 124
TspRI CASTG 2 cut(s) 268, 654
Vha464I CTTAAG 1 cut(s) 1210
VpaK11BI GGWCC 3 cut(s) 478, 745, 1193
VspI ATTAAT 2 cut(s) 807, 921
XagI CCTNNNNNAGG 1 cut(s) 1226
XapI RAATTY 4 cut(s) 561, 761, 938, 1069
XceI RCATGY 1 cut(s) 1091
XmnI GAANNNNTTC 2 cut(s) 348, 561
Zsp2I ATGCAT 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.