Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0015388

Physical Location & Seq

Genomic Coordinates Forward (+)

46736588 .. 46742207

Gene Structure 5620 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G573400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGTTCTCCACCGTCCGATCTCTCTCCCCCTTCCTCGTCTTTGCTTTCCTTCTCCTATCCCCCGCGTTCGCCTCCGAGGCAGATCACAAGTATCAAACAGAAGAACCAGTTACTCTTTGGGTGAATAAAGTTGGGCCATATAATAATCCACAAGAAACGTACAATTACTACAGTCTTCCTTTCTGTCATCCATCTGAAAATGCCGCTCACAAATGGGGTGGTCTTGGTGAAGTCTTGGGTGGAAATGAACTTATTGATAGCCAGATTGACATAAAGTTTCAAAAAAATGTGGATAGGGCCACCATTTGTCAACTTGAACTTGATGATCAAAAGGTTAAACAATTCAAGGATGCAATTGAGAATAGTTACTGGTTTGAATTCTTCATGGATGATCTGCCTTTATGGAGCTTTGTTGGTGAGTTGCATCAGGACAAGAACAGTGAAAATGGCAAGCATGTCCTTTTCACGCATAAGCTTATTATTGTCAAATACAATAAAGATCAGATAATTCATGTGAATCTCACTCAAGATAGTCCAAGGCCGCTGGAAGCAGGGAAAAAGTTGGACCTGACATACTCTGTCAAATGGATTCCAACCACTGTCACCTTTGCACGTCGTTTTGATGTCTATTTGGACTACCCTTTCTTTGAGCACCAAATACATTGGTTCTCGATTTTCAATTCGTTCATGATGGTTATATTCCTTACTGGTTTGGTGTCAATGATATTGATGCGGACTCTTAGGAATGACTATGCAAAATACGCTCGGGAAGACGATGATCTGGAGACTCTGGAAAGGGATGTCAGTGAAGAGTCTGGCTGGAAACTTGTGCATGGGGATGTTTTTCGGCCTCCTCGGAGTCTGGTTATTCTTTCAGCTGTTGTTGGCACAGGAGCTCAGCTAGCTTTGCTTGTTCTCCTCGTCATCTTACTGGCAATTGTTGGAATGTTGTATGTTGGGAGAGGTGCAATTGTTACAACTTTCATAGTGTGTTATGCCCTTACCTCATTCATTTCTGGTTATGTAAGTGGTGGGATGTATTCACGGAATGGGGGTAAAAACTGGATAAAGTCAATGATTCTCACAGCATCTCTATTTCCATTTATGTGCTTTGGAATTGGGTTCGTCTTGAACACCATTGCTATATTCTATGGGTCTCTAGCAGCTATTCCTTTTGGCACAATGGTGGTTGTTTTTGTCATTTGGGCTTTCATCTCTTTTCCTCTAGCACTTCTTGGCACTGTTGTTGGAAGAAACTGGAGTGGTGCTCCTAATAATCCCTGTCGTGTGAAAACCATTCCTCGTCCTATTCCTGAGAAGAAATGGTATTTAACCCCATCTGTTGTCTCAATGATGGGAGGACTTCTGCCCTTTGGAAGCATATTTATCGAAATGTATTTTGTCTTCACATCCTTCTGGAATTACAAGGTGTACTATGTCTATGGCTTTATGCTTCTTGTTTTTCTGATTCTCATCATTGTTACTGTATGCGTGACGATTGTGGGGACATACTTCTTGCTTAATGCTGAGAACTACCACTGGCAATGGACTTCATTCTTTTCTGCTGCATCAACAGCTGTCTACGTGTACTTGTATTCAATATATTACTACTATGCGAAGACTAAGATGTCAGGTTTCTTCCAGACCAGCTTCTATTTTGGGTACACTTTGATGTTTTGCCTTGGCTTAGGAATTCTCTGTGGAGCTGTTGGATATCTGGGCTCTAATTTGTTTGTGAGGAGGATCTACAGAAACATCAAGTGCGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005795 GO:0005797 GO:0005801 GO:0005802 GO:0012505 GO:0016020 GO:0016021 GO:0031224 GO:0031410 GO:0031982 GO:0031984 GO:0031985 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

ko00195 map00195

Pfam Domains

Protein Families

EMP70

Protein Analysis

590

Amino Acids

67.33

Weight (kDa)

7.93

Isoelectric Point (pI)

33.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015388)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10950
fragaria_vesca	FvH4_5g28830
malus_domestica	MD08G1236600.v1.1 MD15G1428600.v1.1
prunus_persica	Prupe.1G573400_v2.0.a1 Prupe.1G573400_v2.0.a1
pyrus_communis	pycom08g20490 pycom15g37960
rosa_chinensis	RchiOBHm_Chr7g0221061
rosa_laevigata	RLG00000002178
rosa_multiflora	Rmu_sc0002105.1_g000001 Rmu_sc0012763.1_g000003
rosa_roxburghii	Rroxscaffold_3G00238770
rosa_rugosa	Rorug07G0200400
rosa_samantha	Rh7AG339800
rosa_wichuraiana	Rw7G028910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1627
AccBSI	CCGCTC	1 cut(s)	206
AccI	GTMKAC	1 cut(s)	1581
AccII	CGCG	1 cut(s)	65
AciI	CCGC	4 cut(s)	63, 204, 542, 733
AclWI	GGATC	1 cut(s)	1751
AcsI	RAATTY	2 cut(s)	377, 1692
AfaI	GTAC	4 cut(s)	161, 1433, 1589, 1664
AflIII	ACRYGT	1 cut(s)	1584
AgsI	TTSAA	7 cut(s)	281, 317, 346, 377, 679, 1132, 1599
AjiI	CACGTC	1 cut(s)	614
AleI	CACNNNNGTG	1 cut(s)	1184
Alw21I	GWGCWC	3 cut(s)	654, 898, 1270
Alw26I	GTCTC	3 cut(s)	779, 1161, 1351
AlwI	GGATC	1 cut(s)	1751
Ama87I	CYCGRG	1 cut(s)	765
AoxI	GGCC	4 cut(s)	134, 297, 539, 848
ApeKI	GCWGC	2 cut(s)	1163, 1565
ApoI	RAATTY	2 cut(s)	377, 1692
AspS9I	GGNCC	3 cut(s)	134, 297, 565
AsuHPI	GGTGA	4 cut(s)	133, 239, 428, 595
AsuNHI	GCTAGC	1 cut(s)	901
AvaI	CYCGRG	1 cut(s)	765
AvaII	GGWCC	1 cut(s)	565
BanII	GRGCYC	2 cut(s)	898, 1724
BarI	GAAGNNNNNNTAC	2 cut(s)	1388, 1420
BbsI	GAAGAC	4 cut(s)	167, 777, 1396, 1625
Bbv12I	GWGCWC	3 cut(s)	654, 898, 1270
BbvI	GCAGC	2 cut(s)	1175, 1552
BccI	CCATC	4 cut(s)	199, 685, 1345, 1348
BcgI	CGANNNNNNTGC	2 cut(s)	1369, 1403
BclI	TGATCA	1 cut(s)	325
BcoDI	GTCTC	3 cut(s)	779, 1161, 1351
BfaI	CTAG	4 cut(s)	902, 1160, 1226, 1768
BfmI	CTRYAG	2 cut(s)	169, 1747
BglI	GCCNNNNNGGC	1 cut(s)	77
BisI	GCNGC	4 cut(s)	204, 542, 1164, 1566
BlpI	GCTNAGC	1 cut(s)	897
BlsI	GCNGC	4 cut(s)	205, 543, 1165, 1567
Bme18I	GGWCC	1 cut(s)	565
BmeT110I	CYCGRG	1 cut(s)	765
BmgBI	CACGTC	1 cut(s)	614
BmgT120I	GGNCC	3 cut(s)	134, 297, 565
BmsI	GCATC	5 cut(s)	340, 433, 720, 1097, 1577
BmtI	GCTAGC	1 cut(s)	905
BpiI	GAAGAC	4 cut(s)	167, 777, 1396, 1625
BplI	GAGNNNNNCTC	2 cut(s)	1252, 1284
BpmI	CTGGAG	2 cut(s)	803, 1279
Bpu10I	CCTNAGC	1 cut(s)	1687
Bpu1102I	GCTNAGC	1 cut(s)	897
BpuEI	CTTGAG	1 cut(s)	510
BsaAI	YACGTR	1 cut(s)	1585
BsaBI	GATNNNNATC	1 cut(s)	1472
BsaI	GGTCTC	1 cut(s)	1161
BsaJI	CCNNGG	4 cut(s)	75, 536, 854, 1681
Bse1I	ACTGG	7 cut(s)	107, 374, 712, 936, 1067, 1262, 1544
Bse3DI	GCAATG	2 cut(s)	1137, 1550
Bse8I	GATNNNNATC	1 cut(s)	1472
BseDI	CCNNGG	4 cut(s)	75, 536, 854, 1681
BseGI	GGATG	7 cut(s)	187, 355, 394, 805, 844, 1041, 1409
BseJI	GATNNNNATC	1 cut(s)	1472
BseMI	GCAATG	2 cut(s)	1137, 1550
BseMII	CTCAG	3 cut(s)	911, 1305, 1518
BseNI	ACTGG	7 cut(s)	107, 374, 712, 936, 1067, 1262, 1544
BseRI	GAGGAG	3 cut(s)	843, 908, 1753
BseXI	GCAGC	2 cut(s)	1175, 1552
Bsh1236I	CGCG	1 cut(s)	65
BshFI	GGCC	4 cut(s)	136, 299, 541, 850
BsiHKAI	GWGCWC	3 cut(s)	654, 898, 1270
BsiHKCI	CYCGRG	1 cut(s)	765
BslFI	GGGAC	1 cut(s)	1519
BsmAI	GTCTC	3 cut(s)	779, 1161, 1351
BsmFI	GGGAC	1 cut(s)	1519
BsnI	GGCC	4 cut(s)	136, 299, 541, 850
Bso31I	GGTCTC	1 cut(s)	1161
BsoBI	CYCGRG	1 cut(s)	765
Bsp1286I	GDGCHC	4 cut(s)	654, 898, 1270, 1724
Bsp143I	GATC	7 cut(s)	17, 82, 325, 391, 499, 778, 1743
Bsp1720I	GCTNAGC	1 cut(s)	897
BspACI	CCGC	4 cut(s)	63, 204, 542, 733
BspANI	GGCC	4 cut(s)	136, 299, 541, 850
BspCNI	CTCAG	3 cut(s)	910, 1306, 1519
BspFNI	CGCG	1 cut(s)	65
BspHI	TCATGA	1 cut(s)	687
BspOI	GCTAGC	1 cut(s)	905
BspPI	GGATC	1 cut(s)	1751
BspTNI	GGTCTC	1 cut(s)	1161
BsrBI	CCGCTC	1 cut(s)	206
BsrDI	GCAATG	2 cut(s)	1137, 1550
BsrI	ACTGG	7 cut(s)	107, 374, 712, 936, 1067, 1262, 1544
BssECI	CCNNGG	4 cut(s)	75, 536, 854, 1681
BssMI	GATC	7 cut(s)	17, 82, 325, 391, 499, 778, 1743
BssT1I	CCWWGG	2 cut(s)	536, 1681
Bst4CI	ACNGT	6 cut(s)	13, 173, 440, 601, 1243, 1486
Bst6I	CTCTTC	1 cut(s)	804
BstBAI	YACGTR	1 cut(s)	1585
BstC8I	GCNNGC	2 cut(s)	452, 903
BstDEI	CTNAG	6 cut(s)	740, 897, 1314, 1527, 1623, 1687
BstF5I	GGATG	7 cut(s)	187, 355, 394, 805, 844, 1041, 1409
BstFNI	CGCG	1 cut(s)	65
BstKTI	GATC	7 cut(s)	20, 85, 328, 394, 502, 781, 1746
BstMAI	GTCTC	3 cut(s)	779, 1161, 1351
BstMBI	GATC	7 cut(s)	17, 82, 325, 391, 499, 778, 1743
BstMWI	GCNNNNNNNGC	5 cut(s)	77, 761, 902, 907, 1574
BstNSI	RCATGY	1 cut(s)	458
BstSFI	CTRYAG	2 cut(s)	169, 1747
BstUI	CGCG	1 cut(s)	65
BstV1I	GCAGC	2 cut(s)	1175, 1552
BstV2I	GAAGAC	4 cut(s)	167, 777, 1396, 1625
BstX2I	RGATCY	1 cut(s)	1743
BstYI	RGATCY	1 cut(s)	1743
BsuRI	GGCC	4 cut(s)	136, 299, 541, 850
BtrI	CACGTC	1 cut(s)	614
BtsCI	GGATG	7 cut(s)	187, 355, 394, 805, 844, 1041, 1409
BtsIMutI	CAGTG	5 cut(s)	445, 597, 811, 1239, 1537
Cac8I	GCNNGC	2 cut(s)	452, 903
CciI	TCATGA	1 cut(s)	687
Cfr13I	GGNCC	3 cut(s)	134, 297, 565
Csp6I	GTAC	4 cut(s)	160, 1432, 1588, 1663
CspCI	CAANNNNNGTGG	2 cut(s)	199, 234
CviAII	CATG	5 cut(s)	385, 455, 512, 688, 833
CviQI	GTAC	4 cut(s)	160, 1432, 1588, 1663
DdeI	CTNAG	6 cut(s)	740, 897, 1314, 1527, 1623, 1687
DpnI	GATC	7 cut(s)	19, 84, 327, 393, 501, 780, 1745
DpnII	GATC	7 cut(s)	17, 82, 325, 391, 499, 778, 1743
DrdI	GACNNNNNNGTC	1 cut(s)	1627
DseDI	GACNNNNNNGTC	1 cut(s)	1627
Eam1104I	CTCTTC	1 cut(s)	804
EarI	CTCTTC	1 cut(s)	804
Ecl136II	GAGCTC	1 cut(s)	896
Eco130I	CCWWGG	2 cut(s)	536, 1681
Eco24I	GRGCYC	2 cut(s)	898, 1724
Eco31I	GGTCTC	1 cut(s)	1161
Eco32I	GATATC	1 cut(s)	1715
Eco47I	GGWCC	1 cut(s)	565
Eco53kI	GAGCTC	1 cut(s)	896
Eco88I	CYCGRG	1 cut(s)	765
EcoICRI	GAGCTC	1 cut(s)	896
EcoRI	GAATTC	2 cut(s)	377, 1692
EcoRV	GATATC	1 cut(s)	1715
EcoT14I	CCWWGG	2 cut(s)	536, 1681
EcoT38I	GRGCYC	2 cut(s)	898, 1724
ErhI	CCWWGG	2 cut(s)	536, 1681
FaeI	CATG	5 cut(s)	388, 458, 515, 691, 836
FaqI	GGGAC	1 cut(s)	1519
FatI	CATG	5 cut(s)	384, 454, 511, 687, 832
FauI	CCCGC	1 cut(s)	70
FbaI	TGATCA	1 cut(s)	325
FblI	GTMKAC	1 cut(s)	1581
Fnu4HI	GCNGC	4 cut(s)	204, 542, 1164, 1566
FokI	GGATG	7 cut(s)	174, 362, 401, 812, 851, 1048, 1396
FriOI	GRGCYC	2 cut(s)	898, 1724
Fsp4HI	GCNGC	4 cut(s)	204, 542, 1164, 1566
FspBI	CTAG	4 cut(s)	902, 1160, 1226, 1768
GluI	GCNGC	4 cut(s)	204, 542, 1164, 1566
GsuI	CTGGAG	2 cut(s)	803, 1279
HaeIII	GGCC	4 cut(s)	136, 299, 541, 850
Hin1II	CATG	5 cut(s)	388, 458, 515, 691, 836
HincII	GTYRAC	1 cut(s)	311
HindII	GTYRAC	1 cut(s)	311
HindIII	AAGCTT	1 cut(s)	473
HinfI	GANTC	8 cut(s)	517, 589, 736, 787, 812, 859, 1078, 1468
HphI	GGTGA	4 cut(s)	133, 239, 428, 595
Hpy166II	GTNNAC	5 cut(s)	311, 1432, 1582, 1588, 1665
Hpy188I	TCNGA	6 cut(s)	17, 76, 196, 504, 858, 1467
Hpy8I	GTNNAC	5 cut(s)	311, 1432, 1582, 1588, 1665
Hpy99I	CGWCG	1 cut(s)	618
HpyAV	CCTTC	3 cut(s)	40, 59, 1423
HpyCH4III	ACNGT	6 cut(s)	13, 173, 440, 601, 1243, 1486
HpyCH4IV	ACGT	3 cut(s)	158, 613, 1584
HpyCH4V	TGCA	7 cut(s)	353, 424, 611, 755, 832, 968, 1568
HpyF10VI	GCNNNNNNNGC	5 cut(s)	77, 761, 902, 907, 1574
HpyF3I	CTNAG	6 cut(s)	740, 897, 1314, 1527, 1623, 1687
HpySE526I	ACGT	3 cut(s)	158, 613, 1584
Hsp92II	CATG	5 cut(s)	388, 458, 515, 691, 836
Ksp22I	TGATCA	1 cut(s)	325
Kzo9I	GATC	7 cut(s)	17, 82, 325, 391, 499, 778, 1743
LmnI	GCTCC	4 cut(s)	405, 893, 1273, 1703
Lsp1109I	GCAGC	2 cut(s)	1175, 1552
LweI	GCATC	5 cut(s)	340, 433, 720, 1097, 1577
MaeI	CTAG	4 cut(s)	902, 1160, 1226, 1768
MaeII	ACGT	3 cut(s)	158, 613, 1584
MaeIII	GTNAC	6 cut(s)	109, 365, 601, 973, 1480, 1492
MalI	GATC	7 cut(s)	19, 84, 327, 393, 501, 780, 1745
MbiI	CCGCTC	1 cut(s)	206
MboI	GATC	7 cut(s)	17, 82, 325, 391, 499, 778, 1743
MfeI	CAATTG	3 cut(s)	354, 936, 969
MflI	RGATCY	1 cut(s)	1743
MhlI	GDGCHC	4 cut(s)	654, 898, 1270, 1724
MlyI	GAGTC	4 cut(s)	730, 781, 821, 868
MmeI	TCCRAC	5 cut(s)	543, 617, 922, 1228, 1690
MseI	TTAA	3 cut(s)	336, 1331, 1521
MslI	CAYNNNNRTG	4 cut(s)	837, 1105, 1184, 1670
MspA1I	CMGCKG	3 cut(s)	544, 878, 1577
MunI	CAATTG	3 cut(s)	354, 936, 969
MvnI	CGCG	1 cut(s)	65
MwoI	GCNNNNNNNGC	5 cut(s)	77, 761, 902, 907, 1574
NdeII	GATC	7 cut(s)	17, 82, 325, 391, 499, 778, 1743
NheI	GCTAGC	1 cut(s)	901
NlaIII	CATG	5 cut(s)	388, 458, 515, 691, 836
NmuCI	GTSAC	2 cut(s)	601, 1492
NspI	RCATGY	1 cut(s)	458
OliI	CACNNNNGTG	1 cut(s)	1184
PagI	TCATGA	1 cut(s)	687
PfeI	GAWTC	4 cut(s)	517, 589, 1078, 1468
PkrI	GCNGC	4 cut(s)	205, 543, 1165, 1567
PleI	GAGTC	4 cut(s)	730, 781, 820, 867
PpsI	GAGTC	4 cut(s)	730, 781, 820, 867
Ppu21I	YACGTR	1 cut(s)	1585
Psp124BI	GAGCTC	1 cut(s)	898
PspPI	GGNCC	3 cut(s)	134, 297, 565
PsuI	RGATCY	1 cut(s)	1743
PvuII	CAGCTG	2 cut(s)	878, 1577
RsaI	GTAC	4 cut(s)	161, 1433, 1589, 1664
RsaNI	GTAC	4 cut(s)	160, 1432, 1588, 1663
RseI	CAYNNNNRTG	4 cut(s)	837, 1105, 1184, 1670
SacI	GAGCTC	1 cut(s)	898
SaqAI	TTAA	3 cut(s)	336, 1331, 1521
SatI	GCNGC	4 cut(s)	204, 542, 1164, 1566
Sau3AI	GATC	7 cut(s)	17, 82, 325, 391, 499, 778, 1743
Sau96I	GGNCC	3 cut(s)	134, 297, 565
SchI	GAGTC	4 cut(s)	730, 781, 821, 868
SduI	GDGCHC	4 cut(s)	654, 898, 1270, 1724
SfaNI	GCATC	5 cut(s)	340, 433, 720, 1097, 1577
SfcI	CTRYAG	2 cut(s)	169, 1747
SinI	GGWCC	1 cut(s)	565
SmiMI	CAYNNNNRTG	4 cut(s)	837, 1105, 1184, 1670
SmlI	CTYRAG	1 cut(s)	525
SmoI	CTYRAG	1 cut(s)	525
SsiI	CCGC	4 cut(s)	63, 204, 542, 733
SspMI	CTAG	4 cut(s)	902, 1160, 1226, 1768
SstI	GAGCTC	1 cut(s)	898
StyI	CCWWGG	2 cut(s)	536, 1681
TaaI	ACNGT	6 cut(s)	13, 173, 440, 601, 1243, 1486
TaiI	ACGT	3 cut(s)	161, 616, 1587
TaqI	TCGA	2 cut(s)	671, 1389
TatI	WGTACW	2 cut(s)	1431, 1587
TauI	GCSGC	2 cut(s)	206, 544
TfiI	GAWTC	4 cut(s)	517, 589, 1078, 1468
Tru1I	TTAA	3 cut(s)	336, 1331, 1521
Tru9I	TTAA	3 cut(s)	336, 1331, 1521
TscAI	CASTG	5 cut(s)	445, 604, 811, 1246, 1544
TseFI	GTSAC	2 cut(s)	601, 1492
TseI	GCWGC	2 cut(s)	1163, 1565
Tsp45I	GTSAC	2 cut(s)	601, 1492
TspDTI	ATGAA	8 cut(s)	261, 373, 500, 676, 973, 1000, 1201, 1542
TspGWI	ACGGA	1 cut(s)	1060
TspRI	CASTG	5 cut(s)	445, 604, 811, 1246, 1544
VpaK11BI	GGWCC	1 cut(s)	565
XapI	RAATTY	2 cut(s)	377, 1692
XceI	RCATGY	1 cut(s)	458
XcmI	CCANNNNNNNNNTGG	1 cut(s)	114
XmiI	GTMKAC	1 cut(s)	1581
XspI	CTAG	4 cut(s)	902, 1160, 1226, 1768

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.