COX assembly mitochondrial protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G21192 AT4G21192 |
| fragaria_vesca | FvH4_5g29590 |
| malus_domestica | MD09G1270200.v1.1 MD17G1268300.v1.1 |
| prunus_persica | Prupe.1G582900_v2.0.a1 Prupe.1G582900_v2.0.a1 Prupe.1G582900_v2.0.a1 |
| pyrus_communis | pycom17g26690 |
| rosa_chinensis | RchiOBHm_Chr7g0222581 |
| rosa_multiflora | Rmu_sc0016182.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00236640 |
| rosa_rugosa | Rorug07G0211000 Rorug07G0211100 |
| rosa_samantha | Rh7AG354200 Rh7AG354600 Rh7CG371700 |
| rosa_wichuraiana | Rw7G029790 Rw7G030130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 92 |
| AcuI | CTGAAG | 1 cut(s) | 215 |
| AfaI | GTAC | 1 cut(s) | 109 |
| AgsI | TTSAA | 1 cut(s) | 179 |
| AluBI | AGCT | 4 cut(s) | 127, 155, 212, 260 |
| AluI | AGCT | 4 cut(s) | 127, 155, 212, 260 |
| ApoI | RAATTY | 1 cut(s) | 92 |
| AsuHPI | GGTGA | 1 cut(s) | 113 |
| BglII | AGATCT | 1 cut(s) | 112 |
| BmsI | GCATC | 1 cut(s) | 13 |
| BseGI | GGATG | 2 cut(s) | 4, 79 |
| BseMII | CTCAG | 1 cut(s) | 234 |
| BseYI | CCCAGC | 1 cut(s) | 230 |
| BsgI | GTGCAG | 1 cut(s) | 60 |
| Bsp1407I | TGTACA | 1 cut(s) | 107 |
| Bsp143I | GATC | 2 cut(s) | 76, 112 |
| BspCNI | CTCAG | 1 cut(s) | 235 |
| BsrGI | TGTACA | 1 cut(s) | 107 |
| BssMI | GATC | 2 cut(s) | 76, 112 |
| Bst4CI | ACNGT | 1 cut(s) | 134 |
| Bst6I | CTCTTC | 2 cut(s) | 155, 174 |
| BstAUI | TGTACA | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 1 cut(s) | 258 |
| BstDEI | CTNAG | 1 cut(s) | 243 |
| BstF5I | GGATG | 2 cut(s) | 4, 79 |
| BstKTI | GATC | 2 cut(s) | 79, 115 |
| BstMBI | GATC | 2 cut(s) | 76, 112 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 25 |
| BstX2I | RGATCY | 1 cut(s) | 112 |
| BstYI | RGATCY | 1 cut(s) | 112 |
| BtsCI | GGATG | 2 cut(s) | 4, 79 |
| BtsIMutI | CAGTG | 1 cut(s) | 240 |
| Cac8I | GCNNGC | 1 cut(s) | 258 |
| Csp6I | GTAC | 1 cut(s) | 108 |
| CviAII | CATG | 2 cut(s) | 34, 71 |
| CviJI | RGCY | 5 cut(s) | 127, 155, 205, 212, 260 |
| CviKI_1 | RGCY | 5 cut(s) | 127, 155, 205, 212, 260 |
| CviQI | GTAC | 1 cut(s) | 108 |
| DdeI | CTNAG | 1 cut(s) | 243 |
| DpnI | GATC | 2 cut(s) | 78, 114 |
| DpnII | GATC | 2 cut(s) | 76, 112 |
| Eam1104I | CTCTTC | 2 cut(s) | 155, 174 |
| EarI | CTCTTC | 2 cut(s) | 155, 174 |
| Eco57I | CTGAAG | 1 cut(s) | 215 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 2 cut(s) | 37, 74 |
| FaiI | YATR | 2 cut(s) | 35, 72 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 158, 190 |
| FatI | CATG | 2 cut(s) | 33, 70 |
| FokI | GGATG | 1 cut(s) | 66 |
| GsaI | CCCAGC | 1 cut(s) | 234 |
| Hin1II | CATG | 2 cut(s) | 37, 74 |
| HindIII | AAGCTT | 3 cut(s) | 125, 210, 258 |
| HinfI | GANTC | 1 cut(s) | 247 |
| HphI | GGTGA | 1 cut(s) | 113 |
| Hpy166II | GTNNAC | 1 cut(s) | 172 |
| Hpy188I | TCNGA | 1 cut(s) | 63 |
| Hpy8I | GTNNAC | 1 cut(s) | 172 |
| HpyAV | CCTTC | 2 cut(s) | 160, 190 |
| HpyCH4III | ACNGT | 1 cut(s) | 134 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 41, 256 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 25 |
| HpyF3I | CTNAG | 1 cut(s) | 243 |
| Hsp92II | CATG | 2 cut(s) | 37, 74 |
| Kzo9I | GATC | 2 cut(s) | 76, 112 |
| LpnPI | CCDG | 2 cut(s) | 131, 216 |
| LweI | GCATC | 1 cut(s) | 13 |
| MalI | GATC | 2 cut(s) | 78, 114 |
| MboI | GATC | 2 cut(s) | 76, 112 |
| MboII | GAAGA | 2 cut(s) | 172, 191 |
| MflI | RGATCY | 1 cut(s) | 112 |
| MluCI | AATT | 1 cut(s) | 92 |
| MnlI | CCTC | 4 cut(s) | 18, 46, 156, 210 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 2 cut(s) | 14, 262 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 25 |
| NdeII | GATC | 2 cut(s) | 76, 112 |
| NlaIII | CATG | 2 cut(s) | 37, 74 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PfeI | GAWTC | 1 cut(s) | 247 |
| PspFI | CCCAGC | 1 cut(s) | 230 |
| PsuI | RGATCY | 1 cut(s) | 112 |
| RsaI | GTAC | 1 cut(s) | 109 |
| RsaNI | GTAC | 1 cut(s) | 108 |
| SaqAI | TTAA | 2 cut(s) | 14, 262 |
| Sau3AI | GATC | 2 cut(s) | 76, 112 |
| SetI | ASST | 5 cut(s) | 129, 157, 171, 214, 262 |
| SfaNI | GCATC | 1 cut(s) | 13 |
| SgeI | CNNG | 9 cut(s) | 37, 46, 64, 83, 140, 158, 221, 228, 243 |
| Sse9I | AATT | 1 cut(s) | 92 |
| TaaI | ACNGT | 1 cut(s) | 134 |
| TaqI | TCGA | 2 cut(s) | 51, 215 |
| TasI | AATT | 1 cut(s) | 92 |
| TatI | WGTACW | 1 cut(s) | 107 |
| TfiI | GAWTC | 1 cut(s) | 247 |
| Tru1I | TTAA | 2 cut(s) | 14, 262 |
| Tru9I | TTAA | 2 cut(s) | 14, 262 |
| TscAI | CASTG | 1 cut(s) | 247 |
| TspRI | CASTG | 1 cut(s) | 247 |
| XapI | RAATTY | 1 cut(s) | 92 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |