Prupe.2G033200_v2.0.a1

Glutaredoxin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0012042
Physical Location & Seq
Reverse (-)
3563544 .. 3565292
1749 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G033200.1

Sequence Viewer

Length: 828 bp
ATGGCTGATCTTGAAAATAGGCTCGAATTGTCGGGTAAGCCCAAACCCACCGCCTTGTTCTTCAATCGATCGCTTAGCATGTACCCTACCCCCATGGATGCTCCCAAGAAGCCCCATTTCCATGCTTCGCTCGATCACCACACAAATTCCTTCAAGAAATTCTACAATTCCATCGAGACGGTGCGTTCCGCCAGCAGTTCCTTCAAAGGGAAGGTCAAGAAGCTCTGCAGTTTTTTCGAATCGGATAAACCCGGGTCGCGAAATCCTGATGAATCGCAATCCCTGATGAATGTGAAGCTAAGACCCTCGAAGTCAATGGCGCCGTCGAAATCCATAGCGCCAGATTTTCGGATTCTGTCGATTCGGTTGCCAGGCACGGATGATCGAATTGTGGTGTATTTCACGAGTTTGCGAGGGATTCGGAGGACATATGAGGATTGTTATGCTGTGAGGATGATATTCAAGGGGTTTGGGGTATGGGTTGATGAAAGAGATATATCTATGGATTCGGCCTATAGGAAAGAGTTGCAGAGCGTTTTGGGTGAGAAGAATGTGAGTTTGCCACAAGTATTTATAAGGGGAAAGTATGTGGGAGGTGCTGAGGTGATCAAACAGCTGTTTGAGACTGGGGAATTGGCGAAAATTCTTCAAGGGATTCCTATTCGGAAACCCGGGTTTGTGTGTGAAGGTTGTGGGGATGCGCGGTTCGTGCCCTGCATGAATTGCAGTGGGAGTAGGAAGGTATTTGATGAAGATGAAGGGATGCTCAAGAGGTGCCCTGAGTGCAATGAAAATGGTTTGACTCGGTGTCGTGATTGCAGCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glutaredoxin

Protein Analysis

276

Amino Acids

31.0

Weight (kDa)

9.18

Isoelectric Point (pI)

34.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012042)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G13810
fragaria_vesca FvH4_3g03100 FvH4_7g02860
malus_domestica MD02G1289200.v1.1 MD07G1038000.v1.1
prunus_persica Prupe.2G033200_v2.0.a1
pyrus_communis pycom07g02630
rosa_chinensis RchiOBHm_Chr1g0323791
rosa_laevigata RLG00000030296
rosa_multiflora Rmu_co8205106.1_g000001 Rmu_sc0000252.1_g000031 Rmu_sc0002634.1_g000015
rosa_roxburghii Rroxscaffold_4G00326410
rosa_rugosa Rorug01G0039600
rosa_samantha Rh1AG056800 Rh1BG047800 Rh1CG058100 Rh1DG061900
rosa_wichuraiana Rw1G004840

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 575
AccB1I GGYRCC 2 cut(s) 319, 774
AccII CGCG 2 cut(s) 259, 703
AciI CCGC 3 cut(s) 51, 189, 703
AcsI RAATTY 3 cut(s) 145, 158, 642
AcyI GRCGYC 1 cut(s) 320
AfaI GTAC 1 cut(s) 83
AfiI CCNNNNNNNGG 1 cut(s) 207
AgsI TTSAA 6 cut(s) 14, 64, 154, 205, 463, 650
AhdI GACNNNNNGTC 1 cut(s) 807
AjnI CCWGG 1 cut(s) 370
AloI GAACNNNNNNTCC 2 cut(s) 689, 721
AluBI AGCT 4 cut(s) 223, 298, 616, 822
AluI AGCT 4 cut(s) 223, 298, 616, 822
Alw26I GTCTC 2 cut(s) 170, 617
Ama87I CYCGRG 2 cut(s) 251, 671
AoxI GGCC 1 cut(s) 510
ApeKI GCWGC 1 cut(s) 819
ApoI RAATTY 3 cut(s) 145, 158, 642
ArsI GACNNNNNNTTYG 2 cut(s) 198, 230
AspLEI GCGC 3 cut(s) 322, 340, 703
AsuC2I CCSGG 4 cut(s) 252, 253, 672, 673
AsuHPI GGTGA 3 cut(s) 128, 554, 616
AsuII TTCGAA 1 cut(s) 237
AvaI CYCGRG 2 cut(s) 251, 671
BaeGI GKGCMC 2 cut(s) 714, 779
BanI GGYRCC 2 cut(s) 319, 774
BauI CACGAG 1 cut(s) 403
BbvCI CCTCAGC 1 cut(s) 600
BccI CCATC 1 cut(s) 179
BceAI ACGGC 1 cut(s) 307
BcgI CGANNNNNNTGC 4 cut(s) 217, 251, 349, 383
BciT130I CCWGG 1 cut(s) 372
BclI TGATCA 1 cut(s) 606
BcnI CCSGG 4 cut(s) 252, 253, 672, 673
BcoDI GTCTC 2 cut(s) 170, 617
BfmI CTRYAG 2 cut(s) 226, 514
BfoI RGCGCY 2 cut(s) 323, 341
BisI GCNGC 1 cut(s) 820
BlpI GCTNAGC 1 cut(s) 74
BlsI GCNGC 1 cut(s) 821
Bme1390I CCNGG 5 cut(s) 252, 253, 372, 672, 673
BmeRI GACNNNNNGTC 1 cut(s) 807
BmeT110I CYCGRG 2 cut(s) 251, 671
BmiI GGNNCC 2 cut(s) 321, 776
BmrFI CCNGG 5 cut(s) 252, 253, 372, 672, 673
BmrI ACTGGG 1 cut(s) 636
BmsI GCATC 3 cut(s) 88, 688, 753
BmuI ACTGGG 1 cut(s) 636
Bpu10I CCTNAGC 1 cut(s) 600
Bpu1102I GCTNAGC 1 cut(s) 74
Bpu14I TTCGAA 1 cut(s) 237
BpuEI CTTGAG 1 cut(s) 752
BpuMI CCSGG 4 cut(s) 252, 253, 672, 673
Bsa29I ATCGAT 1 cut(s) 67
BsaHI GRCGYC 1 cut(s) 320
BsaJI CCNNGG 3 cut(s) 93, 251, 671
Bsc4I CCNNNNNNNGG 1 cut(s) 207
Bse1I ACTGG 1 cut(s) 631
Bse3DI GCAATG 1 cut(s) 793
BseBI CCWGG 1 cut(s) 372
BseCI ATCGAT 1 cut(s) 67
BseDI CCNNGG 3 cut(s) 93, 251, 671
BseGI GGATG 5 cut(s) 103, 385, 459, 703, 768
BseLI CCNNNNNNNGG 1 cut(s) 207
BseMI GCAATG 1 cut(s) 793
BseMII CTCAG 2 cut(s) 591, 771
BseNI ACTGG 1 cut(s) 631
BseSI GKGCMC 2 cut(s) 714, 779
Bsh1236I CGCG 2 cut(s) 259, 703
Bsh1285I CGRYCG 1 cut(s) 71
BshFI GGCC 1 cut(s) 512
BshNI GGYRCC 2 cut(s) 319, 774
BshVI ATCGAT 1 cut(s) 67
BsiEI CGRYCG 1 cut(s) 71
BsiHKCI CYCGRG 2 cut(s) 251, 671
BsiSI CCGG 2 cut(s) 252, 672
BslI CCNNNNNNNGG 1 cut(s) 207
BsmAI GTCTC 2 cut(s) 170, 617
BsmBI CGTCTC 1 cut(s) 170
BsnI GGCC 1 cut(s) 512
BsoBI CYCGRG 2 cut(s) 251, 671
Bsp119I TTCGAA 1 cut(s) 237
Bsp1286I GDGCHC 2 cut(s) 714, 779
Bsp143I GATC 5 cut(s) 7, 68, 133, 382, 606
Bsp1720I GCTNAGC 1 cut(s) 74
Bsp19I CCATGG 1 cut(s) 93
Bsp68I TCGCGA 1 cut(s) 259
BspACI CCGC 3 cut(s) 51, 189, 703
BspANI GGCC 1 cut(s) 512
BspCNI CTCAG 2 cut(s) 592, 772
BspDI ATCGAT 1 cut(s) 67
BspFNI CGCG 2 cut(s) 259, 703
BspLI GGNNCC 2 cut(s) 321, 776
BspMAI CTGCAG 1 cut(s) 230
BspT104I TTCGAA 1 cut(s) 237
BspT107I GGYRCC 2 cut(s) 319, 774
BsrDI GCAATG 1 cut(s) 793
BsrI ACTGG 1 cut(s) 631
BssECI CCNNGG 3 cut(s) 93, 251, 671
BssMI GATC 5 cut(s) 7, 68, 133, 382, 606
BssNI GRCGYC 1 cut(s) 320
BssSI CACGAG 1 cut(s) 403
BssT1I CCWWGG 1 cut(s) 93
Bst2BI CACGAG 1 cut(s) 403
Bst2UI CCWGG 1 cut(s) 372
Bst4CI ACNGT 1 cut(s) 181
BstACI GRCGYC 1 cut(s) 320
BstAPI GCANNNNNTGC 1 cut(s) 723
BstBI TTCGAA 1 cut(s) 237
BstC8I GCNNGC 1 cut(s) 193
BstDEI CTNAG 4 cut(s) 74, 299, 600, 780
BstDSI CCRYGG 1 cut(s) 93
BstF5I GGATG 5 cut(s) 103, 385, 459, 703, 768
BstFNI CGCG 2 cut(s) 259, 703
BstH2I RGCGCY 2 cut(s) 323, 341
BstHHI GCGC 3 cut(s) 322, 340, 703
BstKTI GATC 5 cut(s) 10, 71, 136, 385, 609
BstMAI GTCTC 2 cut(s) 170, 617
BstMBI GATC 5 cut(s) 7, 68, 133, 382, 606
BstMCI CGRYCG 1 cut(s) 71
BstMWI GCNNNNNNNGC 3 cut(s) 709, 723, 783
BstNI CCWGG 1 cut(s) 372
BstNSI RCATGY 1 cut(s) 82
BstSCI CCNGG 5 cut(s) 250, 251, 370, 670, 671
BstSFI CTRYAG 2 cut(s) 226, 514
BstSLI GKGCMC 2 cut(s) 714, 779
BstUI CGCG 2 cut(s) 259, 703
Bsu15I ATCGAT 1 cut(s) 67
BsuRI GGCC 1 cut(s) 512
BsuTUI ATCGAT 1 cut(s) 67
BtgI CCRYGG 1 cut(s) 93
BtsCI GGATG 5 cut(s) 103, 385, 459, 703, 768
BtsI GCAGTG 1 cut(s) 733
BtsIMutI CAGTG 1 cut(s) 733
BtuMI TCGCGA 1 cut(s) 259
Cac8I GCNNGC 1 cut(s) 193
CfoI GCGC 3 cut(s) 322, 340, 703
Cfr9I CCCGGG 2 cut(s) 251, 671
ClaI ATCGAT 1 cut(s) 67
Csp6I GTAC 1 cut(s) 82
CviAII CATG 4 cut(s) 79, 94, 122, 718
CviJI RGCY 9 cut(s) 5, 22, 40, 112, 223, 298, 512, 616, 822
CviKI_1 RGCY 9 cut(s) 5, 22, 40, 112, 223, 298, 512, 616, 822
CviQI GTAC 1 cut(s) 82
DdeI CTNAG 4 cut(s) 74, 299, 600, 780
DinI GGCGCC 1 cut(s) 321
DpnI GATC 5 cut(s) 9, 70, 135, 384, 608
DpnII GATC 5 cut(s) 7, 68, 133, 382, 606
DriI GACNNNNNGTC 1 cut(s) 807
Eam1105I GACNNNNNGTC 1 cut(s) 807
EciI GGCGGA 1 cut(s) 178
Eco130I CCWWGG 1 cut(s) 93
Eco88I CYCGRG 2 cut(s) 251, 671
EcoRII CCWGG 1 cut(s) 370
EcoT14I CCWWGG 1 cut(s) 93
EgeI GGCGCC 1 cut(s) 321
EheI GGCGCC 1 cut(s) 321
ErhI CCWWGG 1 cut(s) 93
Esp3I CGTCTC 1 cut(s) 170
FaeI CATG 4 cut(s) 82, 97, 125, 721
FatI CATG 4 cut(s) 78, 93, 121, 717
FauNDI CATATG 1 cut(s) 430
FbaI TGATCA 1 cut(s) 606
Fnu4HI GCNGC 1 cut(s) 820
FokI GGATG 5 cut(s) 110, 392, 466, 710, 775
Fsp4HI GCNGC 1 cut(s) 820
GlaI GCGC 3 cut(s) 321, 339, 702
GluI GCNGC 1 cut(s) 820
HaeII RGCGCY 2 cut(s) 323, 341
HaeIII GGCC 1 cut(s) 512
HapII CCGG 2 cut(s) 252, 672
HhaI GCGC 3 cut(s) 322, 340, 703
Hin1I GRCGYC 1 cut(s) 320
Hin1II CATG 4 cut(s) 82, 97, 125, 721
Hin6I GCGC 3 cut(s) 320, 338, 701
HinP1I GCGC 3 cut(s) 320, 338, 701
HinfI GANTC 8 cut(s) 239, 272, 352, 361, 418, 506, 655, 802
HpaII CCGG 2 cut(s) 252, 672
HphI GGTGA 3 cut(s) 128, 554, 616
Hpy188I TCNGA 4 cut(s) 244, 351, 423, 666
Hpy99I CGWCG 1 cut(s) 328
HpyAV CCTTC 6 cut(s) 160, 205, 211, 680, 733, 752
HpyCH4III ACNGT 1 cut(s) 181
HpyCH4V TGCA 6 cut(s) 228, 529, 717, 726, 786, 819
HpyF10VI GCNNNNNNNGC 3 cut(s) 709, 723, 783
HpyF3I CTNAG 4 cut(s) 74, 299, 600, 780
Hsp92I GRCGYC 1 cut(s) 320
Hsp92II CATG 4 cut(s) 82, 97, 125, 721
HspAI GCGC 3 cut(s) 320, 338, 701
KasI GGCGCC 1 cut(s) 319
Ksp22I TGATCA 1 cut(s) 606
Kzo9I GATC 5 cut(s) 7, 68, 133, 382, 606
LmnI GCTCC 1 cut(s) 106
LweI GCATC 3 cut(s) 88, 688, 753
MalI GATC 5 cut(s) 9, 70, 135, 384, 608
MboI GATC 5 cut(s) 7, 68, 133, 382, 606
MboII GAAGA 4 cut(s) 52, 559, 638, 764
MhlI GDGCHC 2 cut(s) 714, 779
MluCI AATT 8 cut(s) 26, 145, 158, 166, 387, 632, 642, 721
Mly113I GGCGCC 1 cut(s) 320
MlyI GAGTC 1 cut(s) 796
MnlI CCTC 8 cut(s) 316, 407, 417, 427, 444, 587, 595, 765
MslI CAYNNNNRTG 1 cut(s) 120
MspA1I CMGCKG 1 cut(s) 616
MspI CCGG 2 cut(s) 252, 672
MspR9I CCNGG 5 cut(s) 252, 253, 372, 672, 673
MvaI CCWGG 1 cut(s) 372
MvnI CGCG 2 cut(s) 259, 703
MwoI GCNNNNNNNGC 3 cut(s) 709, 723, 783
NarI GGCGCC 1 cut(s) 320
NciI CCSGG 4 cut(s) 252, 253, 672, 673
NcoI CCATGG 1 cut(s) 93
NdeI CATATG 1 cut(s) 430
NdeII GATC 5 cut(s) 7, 68, 133, 382, 606
NlaIII CATG 4 cut(s) 82, 97, 125, 721
NlaIV GGNNCC 2 cut(s) 321, 776
NruI TCGCGA 1 cut(s) 259
NspI RCATGY 1 cut(s) 82
NspV TTCGAA 1 cut(s) 237
PfeI GAWTC 7 cut(s) 239, 272, 352, 361, 418, 506, 655
PkrI GCNGC 1 cut(s) 821
Ple19I CGATCG 1 cut(s) 71
PleI GAGTC 1 cut(s) 796
PluTI GGCGCC 1 cut(s) 323
PpsI GAGTC 1 cut(s) 796
PsiI TTATAA 1 cut(s) 575
Psp6I CCWGG 1 cut(s) 370
PspGI CCWGG 1 cut(s) 370
PspN4I GGNNCC 2 cut(s) 321, 776
PstI CTGCAG 1 cut(s) 230
PvuI CGATCG 1 cut(s) 71
PvuII CAGCTG 1 cut(s) 616
RruI TCGCGA 1 cut(s) 259
RsaI GTAC 1 cut(s) 83
RsaNI GTAC 1 cut(s) 82
RseI CAYNNNNRTG 1 cut(s) 120
SatI GCNGC 1 cut(s) 820
Sau3AI GATC 5 cut(s) 7, 68, 133, 382, 606
SchI GAGTC 1 cut(s) 796
ScrFI CCNGG 5 cut(s) 252, 253, 372, 672, 673
SduI GDGCHC 2 cut(s) 714, 779
SfaNI GCATC 3 cut(s) 88, 688, 753
SfcI CTRYAG 2 cut(s) 226, 514
SfoI GGCGCC 1 cut(s) 321
SfuI TTCGAA 1 cut(s) 237
SmaI CCCGGG 2 cut(s) 253, 673
SmiMI CAYNNNNRTG 1 cut(s) 120
SmlI CTYRAG 1 cut(s) 767
SmoI CTYRAG 1 cut(s) 767
Sse9I AATT 8 cut(s) 26, 145, 158, 166, 387, 632, 642, 721
SsiI CCGC 3 cut(s) 51, 189, 703
SspDI GGCGCC 1 cut(s) 319
StyD4I CCNGG 5 cut(s) 250, 251, 370, 670, 671
StyI CCWWGG 1 cut(s) 93
TaaI ACNGT 1 cut(s) 181
TaqI TCGA 9 cut(s) 24, 67, 132, 174, 237, 308, 326, 359, 385
TasI AATT 8 cut(s) 26, 145, 158, 166, 387, 632, 642, 721
TfiI GAWTC 7 cut(s) 239, 272, 352, 361, 418, 506, 655
TscAI CASTG 1 cut(s) 733
TseI GCWGC 1 cut(s) 819
TspDTI ATGAA 7 cut(s) 285, 302, 501, 734, 765, 771, 804
TspGWI ACGGA 1 cut(s) 392
TspMI CCCGGG 2 cut(s) 251, 671
TspRI CASTG 1 cut(s) 733
XapI RAATTY 3 cut(s) 145, 158, 642
XceI RCATGY 1 cut(s) 82
XmaI CCCGGG 2 cut(s) 251, 671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.