Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007244

Physical Location & Seq

Genomic Coordinates Forward (+)

19139268 .. 19145434

Gene Structure 6167 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G133600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 810 bp

ATGAGTATTATGGACGATAGAGGAGGCTCATTTGTCGCTGTTCGGAGGATTTCTCAAGGTCTCGACCGTGGCAACACCTGCCATTCAACTTCTGCTGAGGTTGTGGCAGGATCAGCAGCGTGGCTTGGCCGAGGTCTTTCTTGTGTCTGTGCACAGAGAAGAGAGAGTGATGCTCGTCCTTCCTTTGATTTAACCCCTGTCCAGGAGGAATGCCTGCTGAGACTACAGAGCCGGATAGATGTTCCCTATGAGAGTTTAGTCCCTGAGCATCAGGAAGCTTTGAGGGCCTTGTGGAATGCTGCCTTTCCTGAAGAAGAACTTCGTGGTTTAATATCTGAGCAATGGAAGGAAATGGGTTGGCAAGGGAAGGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATATCATTGGAGAATTTGTTGTTCTTTGCTAGGAATTTCCCGAAATCTTTCCAGGATCTTCTTCGAAAGCAAGAAGGTGATAGGTCTGTGTGGGAATACCCATTTGCTGTTGCTGGTGTGAATATAACATTCATGCTTATTCAGATGCTTGATCTTGAAGCCGTCAAACCACGAACATTGGTGGGAGCTACTTTCTTGAAGTTTCTTGCAGAAAATGAATCAGCGTTTGACCTTATATATTGCATCACATTCAAGCTAATGGACCATCAATGGCTTTCTATGCGTGCATCATATATGGATTTCAATACGGTGATGAAATCCACACGCCGGCAGTTGGAAAAAGAGCTTCTGTTTGAAGACATAACACGGCTGGAAGACTTGCCTTCTTATGGCCTTCTTTCCCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006928 GO:0008064 GO:0008092 GO:0008150 GO:0009987 GO:0010639 GO:0016043 GO:0017022 GO:0030100 GO:0030587 GO:0030832 GO:0030833 GO:0030837 GO:0031333 GO:0032271 GO:0032272 GO:0032502 GO:0032535 GO:0032879 GO:0032956 GO:0032970 GO:0033043 GO:0040011 GO:0043254 GO:0044087 GO:0044424 GO:0044464 GO:0045159 GO:0048519 GO:0048523 GO:0048856 GO:0048870 GO:0050764 GO:0050789 GO:0050794 GO:0051049 GO:0051128 GO:0051129 GO:0051179 GO:0051493 GO:0051494 GO:0051674 GO:0051703 GO:0051704 GO:0060627 GO:0065007 GO:0065008 GO:0071840 GO:0090066 GO:0090702 GO:0099120 GO:0110053 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ELMO_CED12

Protein Analysis

270

Amino Acids

30.74

Weight (kDa)

5.2

Isoelectric Point (pI)

56.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007244)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44770 AT3G60260 AT3G60260 AT3G60260 AT3G60260
fragaria_vesca	FvH4_7g10390 FvH4_7g10390 FvH4_7g10390 FvH4_7g10390
malus_domestica	MD00G1102900.v1.1 MD07G1110100.v1.1
prunus_persica	Prupe.2G133600_v2.0.a1 Prupe.2G133600_v2.0.a1
pyrus_communis	pycom07g09500 pycom12646g00160
rosa_chinensis	RchiOBHm_Chr1g0348091
rosa_laevigata	RLG00000028690
rosa_multiflora	Rmu_sc0005046.1_g000009
rosa_roxburghii	Rroxscaffold_4G00307240
rosa_rugosa	Rorug01G0192400
rosa_samantha	Rh1AG210100 Rh1BG175700 Rh1CG194700 Rh1DG205500
rosa_wichuraiana	Rw1G017540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	86
Acc36I	ACCTGC	1 cut(s)	86
AclWI	GGATC	4 cut(s)	118, 365, 378, 465
AcoI	YGGCCR	1 cut(s)	127
AcsI	RAATTY	2 cut(s)	415, 436
AcuI	CTGAAG	1 cut(s)	330
AfiI	CCNNNNNNNGG	4 cut(s)	202, 729, 736, 791
AgsI	TTSAA	6 cut(s)	87, 560, 601, 655, 706, 758
AjnI	CCWGG	2 cut(s)	201, 453
AluBI	AGCT	4 cut(s)	278, 590, 658, 748
AluI	AGCT	4 cut(s)	278, 590, 658, 748
Alw21I	GWGCWC	1 cut(s)	154
Alw26I	GTCTC	2 cut(s)	65, 214
Alw44I	GTGCAC	1 cut(s)	150
AlwI	GGATC	4 cut(s)	118, 365, 378, 465
AoxI	GGCC	3 cut(s)	127, 285, 793
ApaLI	GTGCAC	1 cut(s)	150
ApeKI	GCWGC	2 cut(s)	116, 299
ApoI	RAATTY	2 cut(s)	415, 436
Asp700I	GAANNNNTTC	2 cut(s)	318, 449
AspS9I	GGNCC	2 cut(s)	285, 664
AsuHPI	GGTGA	2 cut(s)	491, 724
AsuII	TTCGAA	1 cut(s)	466
AvaII	GGWCC	1 cut(s)	664
BaeGI	GKGCMC	1 cut(s)	154
BamHI	GGATCC	1 cut(s)	370
BbsI	GAAGAC	2 cut(s)	765, 783
Bbv12I	GWGCWC	1 cut(s)	154
BbvCI	CCTCAGC	1 cut(s)	96
BbvI	GCAGC	2 cut(s)	128, 286
BccI	CCATC	2 cut(s)	382, 675
BceAI	ACGGC	2 cut(s)	548, 785
BciT130I	CCWGG	2 cut(s)	203, 455
BcoDI	GTCTC	2 cut(s)	65, 214
BfaI	CTAG	1 cut(s)	432
BfmI	CTRYAG	1 cut(s)	224
BfuAI	ACCTGC	1 cut(s)	86
BisI	GCNGC	2 cut(s)	117, 300
BlsI	GCNGC	2 cut(s)	118, 301
Bme1390I	CCNGG	2 cut(s)	203, 455
Bme18I	GGWCC	1 cut(s)	664
BmgT120I	GGNCC	2 cut(s)	285, 664
BmiI	GGNNCC	1 cut(s)	372
BmrFI	CCNGG	2 cut(s)	203, 455
BmsI	GCATC	5 cut(s)	160, 277, 537, 654, 698
BpiI	GAAGAC	2 cut(s)	765, 783
BplI	GAGNNNNNCTC	4 cut(s)	37, 69, 157, 189
Bpu10I	CCTNAGC	2 cut(s)	96, 264
Bpu14I	TTCGAA	1 cut(s)	466
BpuEI	CTTGAG	1 cut(s)	39
BsaI	GGTCTC	1 cut(s)	65
BsaJI	CCNNGG	2 cut(s)	67, 130
BsaXI	ACNNNNNCTCC	2 cut(s)	404, 434
Bsc4I	CCNNNNNNNGG	4 cut(s)	202, 729, 736, 791
Bse118I	RCCGGY	1 cut(s)	729
Bse3DI	GCAATG	1 cut(s)	347
BseBI	CCWGG	2 cut(s)	203, 455
BseDI	CCNNGG	2 cut(s)	67, 130
BseLI	CCNNNNNNNGG	4 cut(s)	202, 729, 736, 791
BseMI	GCAATG	1 cut(s)	347
BseMII	CTCAG	4 cut(s)	87, 209, 255, 327
BseRI	GAGGAG	1 cut(s)	36
BseSI	GKGCMC	1 cut(s)	154
BseXI	GCAGC	2 cut(s)	128, 286
Bsh1285I	CGRYCG	1 cut(s)	67
BshFI	GGCC	3 cut(s)	129, 287, 795
BsiEI	CGRYCG	1 cut(s)	67
BsiHKAI	GWGCWC	1 cut(s)	154
BsiSI	CCGG	2 cut(s)	232, 730
BslFI	GGGAC	1 cut(s)	245
BslI	CCNNNNNNNGG	4 cut(s)	202, 729, 736, 791
BsmAI	GTCTC	2 cut(s)	65, 214
BsmFI	GGGAC	1 cut(s)	245
BsmI	GAATGC	2 cut(s)	215, 301
BsnI	GGCC	3 cut(s)	129, 287, 795
Bso31I	GGTCTC	1 cut(s)	65
Bsp119I	TTCGAA	1 cut(s)	466
Bsp1286I	GDGCHC	1 cut(s)	154
Bsp143I	GATC	4 cut(s)	110, 370, 457, 553
BspANI	GGCC	3 cut(s)	129, 287, 795
BspCNI	CTCAG	4 cut(s)	88, 210, 256, 328
BspLI	GGNNCC	1 cut(s)	372
BspMI	ACCTGC	1 cut(s)	86
BspPI	GGATC	4 cut(s)	118, 365, 378, 465
BspT104I	TTCGAA	1 cut(s)	466
BspTNI	GGTCTC	1 cut(s)	65
BsrDI	GCAATG	1 cut(s)	347
BsrFI	RCCGGY	1 cut(s)	729
BssAI	RCCGGY	1 cut(s)	729
BssECI	CCNNGG	2 cut(s)	67, 130
BssMI	GATC	4 cut(s)	110, 370, 457, 553
Bst2UI	CCWGG	2 cut(s)	203, 455
Bst4CI	ACNGT	2 cut(s)	68, 712
Bst6I	CTCTTC	1 cut(s)	154
BstAPI	GCANNNNNTGC	1 cut(s)	78
BstBI	TTCGAA	1 cut(s)	466
BstC8I	GCNNGC	3 cut(s)	215, 687, 731
BstDEI	CTNAG	4 cut(s)	96, 218, 264, 336
BstDSI	CCRYGG	1 cut(s)	67
BstKTI	GATC	4 cut(s)	113, 373, 460, 556
BstMAI	GTCTC	2 cut(s)	65, 214
BstMBI	GATC	4 cut(s)	110, 370, 457, 553
BstMCI	CGRYCG	1 cut(s)	67
BstMWI	GCNNNNNNNGC	4 cut(s)	78, 113, 284, 682
BstNI	CCWGG	2 cut(s)	203, 455
BstSCI	CCNGG	2 cut(s)	201, 453
BstSFI	CTRYAG	1 cut(s)	224
BstSLI	GKGCMC	1 cut(s)	154
BstV1I	GCAGC	2 cut(s)	128, 286
BstV2I	GAAGAC	2 cut(s)	765, 783
BstX2I	RGATCY	2 cut(s)	370, 457
BstYI	RGATCY	2 cut(s)	370, 457
BsuRI	GGCC	3 cut(s)	129, 287, 795
BtgI	CCRYGG	1 cut(s)	67
BveI	ACCTGC	1 cut(s)	86
Cac8I	GCNNGC	3 cut(s)	215, 687, 731
Cfr10I	RCCGGY	1 cut(s)	729
Cfr13I	GGNCC	2 cut(s)	285, 664
CspCI	CAANNNNNGTGG	2 cut(s)	561, 596
CviAII	CATG	1 cut(s)	535
DdeI	CTNAG	4 cut(s)	96, 218, 264, 336
DpnI	GATC	4 cut(s)	112, 372, 459, 555
DpnII	GATC	4 cut(s)	110, 370, 457, 553
EaeI	YGGCCR	1 cut(s)	127
Eam1104I	CTCTTC	1 cut(s)	154
EarI	CTCTTC	1 cut(s)	154
Eco31I	GGTCTC	1 cut(s)	65
Eco47I	GGWCC	1 cut(s)	664
Eco57I	CTGAAG	1 cut(s)	330
EcoO109I	RGGNCCY	1 cut(s)	285
EcoRII	CCWGG	2 cut(s)	201, 453
FaeI	CATG	1 cut(s)	538
FalI	AAGNNNNNCTT	2 cut(s)	303, 335
FaqI	GGGAC	1 cut(s)	245
FatI	CATG	1 cut(s)	534
Fnu4HI	GCNGC	2 cut(s)	117, 300
Fsp4HI	GCNGC	2 cut(s)	117, 300
FspBI	CTAG	1 cut(s)	432
GluI	GCNGC	2 cut(s)	117, 300
HaeIII	GGCC	3 cut(s)	129, 287, 795
HapII	CCGG	2 cut(s)	232, 730
Hin1II	CATG	1 cut(s)	538
HindIII	AAGCTT	1 cut(s)	276
HinfI	GANTC	1 cut(s)	620
HpaII	CCGG	2 cut(s)	232, 730
HphI	GGTGA	2 cut(s)	491, 724
Hpy166II	GTNNAC	1 cut(s)	152
Hpy188I	TCNGA	3 cut(s)	45, 337, 546
Hpy188III	TCNNGA	7 cut(s)	62, 272, 308, 442, 557, 598, 804
Hpy8I	GTNNAC	1 cut(s)	152
HpyAV	CCTTC	6 cut(s)	189, 340, 361, 470, 795, 806
HpyCH4III	ACNGT	2 cut(s)	68, 712
HpyCH4V	TGCA	4 cut(s)	152, 611, 645, 689
HpyF10VI	GCNNNNNNNGC	4 cut(s)	78, 113, 284, 682
HpyF3I	CTNAG	4 cut(s)	96, 218, 264, 336
Hsp92II	CATG	1 cut(s)	538
KroI	GCCGGC	1 cut(s)	729
KroNI	GCCGGC	1 cut(s)	731
Kzo9I	GATC	4 cut(s)	110, 370, 457, 553
LmnI	GCTCC	1 cut(s)	587
Lsp1109I	GCAGC	2 cut(s)	128, 286
LweI	GCATC	5 cut(s)	160, 277, 537, 654, 698
MaeI	CTAG	1 cut(s)	432
MalI	GATC	4 cut(s)	112, 372, 459, 555
MboI	GATC	4 cut(s)	110, 370, 457, 553
MboII	GAAGA	7 cut(s)	171, 323, 326, 452, 455, 770, 788
MflI	RGATCY	2 cut(s)	370, 457
MhlI	GDGCHC	1 cut(s)	154
MluCI	AATT	2 cut(s)	415, 436
MmeI	TCCRAC	1 cut(s)	717
MnlI	CCTC	7 cut(s)	14, 17, 39, 91, 125, 199, 276
MroNI	GCCGGC	1 cut(s)	729
MroXI	GAANNNNTTC	2 cut(s)	318, 449
MseI	TTAA	2 cut(s)	191, 329
MspI	CCGG	2 cut(s)	232, 730
MspR9I	CCNGG	2 cut(s)	203, 455
Mva1269I	GAATGC	2 cut(s)	215, 301
MvaI	CCWGG	2 cut(s)	203, 455
MwoI	GCNNNNNNNGC	4 cut(s)	78, 113, 284, 682
NaeI	GCCGGC	1 cut(s)	731
NdeII	GATC	4 cut(s)	110, 370, 457, 553
NgoMIV	GCCGGC	1 cut(s)	729
NlaIII	CATG	1 cut(s)	538
NlaIV	GGNNCC	1 cut(s)	372
NmeAIII	GCCGAG	1 cut(s)	155
NspV	TTCGAA	1 cut(s)	466
PaqCI	CACCTGC	1 cut(s)	86
PctI	GAATGC	2 cut(s)	215, 301
PdiI	GCCGGC	1 cut(s)	731
PdmI	GAANNNNTTC	2 cut(s)	318, 449
PfeI	GAWTC	1 cut(s)	620
PfoI	TCCNGGA	2 cut(s)	201, 453
PkrI	GCNGC	2 cut(s)	118, 301
Psp6I	CCWGG	2 cut(s)	201, 453
PspGI	CCWGG	2 cut(s)	201, 453
PspN4I	GGNNCC	1 cut(s)	372
PspPI	GGNCC	2 cut(s)	285, 664
PsuI	RGATCY	2 cut(s)	370, 457
SaqAI	TTAA	2 cut(s)	191, 329
SatI	GCNGC	2 cut(s)	117, 300
Sau3AI	GATC	4 cut(s)	110, 370, 457, 553
Sau96I	GGNCC	2 cut(s)	285, 664
ScrFI	CCNGG	2 cut(s)	203, 455
SduI	GDGCHC	1 cut(s)	154
SfaNI	GCATC	5 cut(s)	160, 277, 537, 654, 698
SfcI	CTRYAG	1 cut(s)	224
SfuI	TTCGAA	1 cut(s)	466
SinI	GGWCC	1 cut(s)	664
SmlI	CTYRAG	1 cut(s)	54
SmoI	CTYRAG	1 cut(s)	54
Sse9I	AATT	2 cut(s)	415, 436
SspMI	CTAG	1 cut(s)	432
StyD4I	CCNGG	2 cut(s)	201, 453
TaaI	ACNGT	2 cut(s)	68, 712
TaqI	TCGA	2 cut(s)	63, 466
TasI	AATT	2 cut(s)	415, 436
TfiI	GAWTC	1 cut(s)	620
Tru1I	TTAA	2 cut(s)	191, 329
Tru9I	TTAA	2 cut(s)	191, 329
TseI	GCWGC	2 cut(s)	116, 299
TspDTI	ATGAA	3 cut(s)	523, 633, 731
VneI	GTGCAC	1 cut(s)	150
VpaK11BI	GGWCC	1 cut(s)	664
XapI	RAATTY	2 cut(s)	415, 436
XmnI	GAANNNNTTC	2 cut(s)	318, 449
XspI	CTAG	1 cut(s)	432

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.