Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0014938

Physical Location & Seq

Genomic Coordinates Forward (+)

20331029 .. 20332901

Gene Structure 1873 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G147000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 939 bp

ATGGATCCAGTAGCAGCACATGGGCGTCCACTGCCTCCTCCTTTTCTTTCTAGAGATCTCCACTTACATCCTCACCACCAATTCCAGCACCACCTCCACCACAACAACCACAATTCCGAAGACGAGCAGAACAGCAGCGGCGGAGGAGGCCTAATTAGCCGCGGCATCAAGCGCGATCGCGACGAGAACACCTCCGCCGCCACCACCTCCTTGGAAGGTAAGGAACTGGGCTCCACCAGTGCCGGGGAGGGCGAGATCACGAGGAGACCCCGGGGCCGCCCCGCGGGCTCCAAGAACAAGGCCAAGCCCCCCATCATCATAACCCGGGACAGCGCCAATGCTCTCCGATCCCACGTCATGGAAGTCGCCAACGGCTGCGATATCATGGACAGCGTCTCCACTTTTGCCAGGCGCAGGCAAAGAGGAGTTTGCATCCTCAGCGGCAGCGGAACCGTCACTAATGTCACTATAAGACAACCGGCCTCCCCGGGATCTGTGGTCACCTTACACGGCAGGTTTGAAATTCTGTCGCTTTCCGGGTCCTTTTTGCCTCCTCCTGCCCCGCCTGCTGCGTCAGGTTTGACTATATACCTGGCCGGCGTGCAGGGCCAGGTGGTTGGGGGAGGGGTTGTGGGCCCACTCCTGGCATCGGGCCCGGTGGTGATCATGGCAGCGTCTTTTGGTAATGCAGCTTATGAGAGGCTGCCTCTGGAGGAGGAGGAGCCTGCTGCCGCAGGGCAGGTGCAGGGAAGCGGACCCCTCGGGTCTCCCGGGGTTGGTGGGCAAGAACATCAACAGCAGTCGATTCAGCAGCAACAACAGCAACTATTGCAAGATCCTAATGCACCGTCGCTTTTTCATGGGATGCCGCAAAGTCTACTAAATTCATGCCAATTGCCTGCTGAGGGATATTGGGGCACAGCACGCCCTCCTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003680 GO:0003690 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009640 GO:0009642 GO:0009646 GO:0009647 GO:0009791 GO:0009889 GO:0010228 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019899 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0042826 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043621 GO:0044424 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF296

Protein Analysis

313

Amino Acids

32.81

Weight (kDa)

6.93

Isoelectric Point (pI)

59.31

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014938)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45430 AT3G60870
fragaria_vesca	FvH4_7g12040
malus_domestica	MD02G1201800.v1.1
prunus_persica	Prupe.2G147000_v2.0.a1
pyrus_communis	pycom07g11310
rosa_chinensis	RchiOBHm_Chr1g0350751
rosa_laevigata	RLG00000028456
rosa_multiflora	Rmu_sc0007810.1_g000008
rosa_roxburghii	Rroxscaffold_4G00304520
rosa_rugosa	Rorug01G0213900
rosa_samantha	Rh1AG228000 Rh1BG197500 Rh1CG213000 Rh1DG225400
rosa_wichuraiana	Rw1G019770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	730
Acc36I	ACCTGC	2 cut(s)	504, 730
AccB7I	CCANNNNNTGG	1 cut(s)	358
AccI	GTMKAC	1 cut(s)	877
AccII	CGCG	4 cut(s)	162, 174, 180, 284
AclWI	GGATC	4 cut(s)	12, 342, 499, 830
AcoI	YGGCCR	1 cut(s)	594
AcsI	RAATTY	2 cut(s)	522, 883
AcyI	GRCGYC	1 cut(s)	25
AfiI	CCNNNNNNNGG	8 cut(s)	243, 283, 358, 414, 643, 649, 776, 905
AgsI	TTSAA	1 cut(s)	521
AjiI	CACGTC	1 cut(s)	355
AjnI	CCWGG	4 cut(s)	407, 591, 609, 642
AluBI	AGCT	1 cut(s)	692
AluI	AGCT	1 cut(s)	692
Alw26I	GTCTC	3 cut(s)	259, 400, 771
AlwI	GGATC	4 cut(s)	12, 342, 499, 830
Ama87I	CYCGRG	5 cut(s)	270, 324, 487, 761, 770
AoxI	GGCC	8 cut(s)	148, 274, 300, 480, 594, 607, 634, 652
ApaI	GGGCCC	2 cut(s)	638, 656
ApoI	RAATTY	2 cut(s)	522, 883
AsiSI	GCGATCGC	1 cut(s)	178
AspLEI	GCGC	3 cut(s)	174, 335, 414
AspS9I	GGNCC	8 cut(s)	274, 540, 607, 634, 635, 652, 653, 755
AsuHPI	GGTGA	3 cut(s)	65, 493, 673
AvaI	CYCGRG	5 cut(s)	270, 324, 487, 761, 770
AvaII	GGWCC	2 cut(s)	540, 755
BaeGI	GKGCMC	3 cut(s)	638, 656, 920
BamHI	GGATCC	1 cut(s)	4
BanII	GRGCYC	4 cut(s)	233, 290, 638, 656
BauI	CACGAG	1 cut(s)	259
BbsI	GAAGAC	1 cut(s)	126
BbvCI	CCTCAGC	2 cut(s)	437, 903
BccI	CCATC	1 cut(s)	320
BceAI	ACGGC	2 cut(s)	388, 526
BciT130I	CCWGG	4 cut(s)	409, 593, 611, 644
BclI	TGATCA	1 cut(s)	663
BcoDI	GTCTC	3 cut(s)	259, 400, 771
BfaI	CTAG	1 cut(s)	51
BfoI	RGCGCY	1 cut(s)	336
BfuAI	ACCTGC	2 cut(s)	504, 730
BglI	GCCNNNNNGGC	1 cut(s)	285
BglII	AGATCT	1 cut(s)	55
Bme18I	GGWCC	2 cut(s)	540, 755
BmeT110I	CYCGRG	5 cut(s)	270, 324, 487, 761, 770
BmgBI	CACGTC	1 cut(s)	355
BmgT120I	GGNCC	8 cut(s)	274, 540, 607, 634, 635, 652, 653, 755
BmrI	ACTGGG	1 cut(s)	236
BmsI	GCATC	4 cut(s)	174, 441, 656, 855
BmuI	ACTGGG	1 cut(s)	236
BpiI	GAAGAC	1 cut(s)	126
BplI	GAGNNNNNCTC	4 cut(s)	176, 208, 691, 723
BpmI	CTGGAG	1 cut(s)	731
Bpu10I	CCTNAGC	2 cut(s)	437, 903
BsaHI	GRCGYC	1 cut(s)	25
BsaI	GGTCTC	2 cut(s)	259, 771
BsaXI	ACNNNNNCTCC	4 cut(s)	380, 410, 615, 645
Bsc4I	CCNNNNNNNGG	8 cut(s)	243, 283, 358, 414, 643, 649, 776, 905
Bse118I	RCCGGY	2 cut(s)	478, 596
Bse1I	ACTGG	3 cut(s)	8, 231, 237
BseBI	CCWGG	4 cut(s)	409, 593, 611, 644
BseGI	GGATG	3 cut(s)	67, 432, 870
BseLI	CCNNNNNNNGG	8 cut(s)	243, 283, 358, 414, 643, 649, 776, 905
BseMII	CTCAG	2 cut(s)	451, 894
BseNI	ACTGG	3 cut(s)	8, 231, 237
BseRI	GAGGAG	8 cut(s)	27, 159, 277, 438, 543, 728, 731, 734
BseSI	GKGCMC	3 cut(s)	638, 656, 920
BsgI	GTGCAG	2 cut(s)	623, 764
Bsh1236I	CGCG	4 cut(s)	162, 174, 180, 284
Bsh1285I	CGRYCG	1 cut(s)	178
BshFI	GGCC	8 cut(s)	150, 276, 302, 482, 596, 609, 636, 654
BsiEI	CGRYCG	1 cut(s)	178
BsiHKCI	CYCGRG	5 cut(s)	270, 324, 487, 761, 770
BsiSI	CCGG	9 cut(s)	243, 271, 325, 479, 488, 537, 597, 656, 771
BslFI	GGGAC	1 cut(s)	341
BslI	CCNNNNNNNGG	8 cut(s)	243, 283, 358, 414, 643, 649, 776, 905
BsmAI	GTCTC	3 cut(s)	259, 400, 771
BsmBI	CGTCTC	1 cut(s)	400
BsmFI	GGGAC	1 cut(s)	341
BsnI	GGCC	8 cut(s)	150, 276, 302, 482, 596, 609, 636, 654
Bso31I	GGTCTC	2 cut(s)	259, 771
BsoBI	CYCGRG	5 cut(s)	270, 324, 487, 761, 770
Bsp120I	GGGCCC	2 cut(s)	634, 652
Bsp1286I	GDGCHC	5 cut(s)	233, 290, 638, 656, 920
Bsp143I	GATC	8 cut(s)	4, 55, 175, 255, 347, 491, 663, 835
Bsp68I	TCGCGA	1 cut(s)	180
BspANI	GGCC	8 cut(s)	150, 276, 302, 482, 596, 609, 636, 654
BspCNI	CTCAG	2 cut(s)	450, 895
BspFNI	CGCG	4 cut(s)	162, 174, 180, 284
BspMI	ACCTGC	2 cut(s)	504, 730
BspPI	GGATC	4 cut(s)	12, 342, 499, 830
BspTNI	GGTCTC	2 cut(s)	259, 771
BsrFI	RCCGGY	2 cut(s)	478, 596
BsrI	ACTGG	3 cut(s)	8, 231, 237
BssAI	RCCGGY	2 cut(s)	478, 596
BssMI	GATC	8 cut(s)	4, 55, 175, 255, 347, 491, 663, 835
BssNI	GRCGYC	1 cut(s)	25
BssSI	CACGAG	1 cut(s)	259
BssT1I	CCWWGG	1 cut(s)	210
Bst2BI	CACGAG	1 cut(s)	259
Bst2UI	CCWGG	4 cut(s)	409, 593, 611, 644
Bst4CI	ACNGT	2 cut(s)	454, 849
BstACI	GRCGYC	1 cut(s)	25
BstAPI	GCANNNNNTGC	1 cut(s)	829
BstC8I	GCNNGC	8 cut(s)	286, 416, 567, 598, 602, 726, 900, 925
BstDEI	CTNAG	2 cut(s)	437, 903
BstDSI	CCRYGG	2 cut(s)	160, 282
BstEII	GGTNACC	1 cut(s)	499
BstF5I	GGATG	3 cut(s)	67, 432, 870
BstFNI	CGCG	4 cut(s)	162, 174, 180, 284
BstH2I	RGCGCY	1 cut(s)	336
BstHHI	GCGC	3 cut(s)	174, 335, 414
BstKTI	GATC	8 cut(s)	7, 58, 178, 258, 350, 494, 666, 838
BstMAI	GTCTC	3 cut(s)	259, 400, 771
BstMBI	GATC	8 cut(s)	4, 55, 175, 255, 347, 491, 663, 835
BstMCI	CGRYCG	1 cut(s)	178
BstNI	CCWGG	4 cut(s)	409, 593, 611, 644
BstPI	GGTNACC	1 cut(s)	499
BstSLI	GKGCMC	3 cut(s)	638, 656, 920
BstUI	CGCG	4 cut(s)	162, 174, 180, 284
BstV2I	GAAGAC	1 cut(s)	126
BstX2I	RGATCY	4 cut(s)	4, 55, 491, 835
BstXI	CCANNNNNNTGG	2 cut(s)	211, 617
BstYI	RGATCY	4 cut(s)	4, 55, 491, 835
BsuRI	GGCC	8 cut(s)	150, 276, 302, 482, 596, 609, 636, 654
BtgI	CCRYGG	2 cut(s)	160, 282
BtrI	CACGTC	1 cut(s)	355
BtsCI	GGATG	3 cut(s)	67, 432, 870
BtsI	GCAGTG	1 cut(s)	29
BtsIMutI	CAGTG	2 cut(s)	29, 244
BtuMI	TCGCGA	1 cut(s)	180
BveI	ACCTGC	2 cut(s)	504, 730
Cac8I	GCNNGC	8 cut(s)	286, 416, 567, 598, 602, 726, 900, 925
CfoI	GCGC	3 cut(s)	174, 335, 414
Cfr10I	RCCGGY	2 cut(s)	478, 596
Cfr13I	GGNCC	8 cut(s)	274, 540, 607, 634, 635, 652, 653, 755
Cfr42I	CCGCGG	2 cut(s)	163, 285
Cfr9I	CCCGGG	4 cut(s)	270, 324, 487, 770
CseI	GACGC	4 cut(s)	14, 382, 561, 663
CviAII	CATG	6 cut(s)	20, 358, 385, 667, 860, 888
DdeI	CTNAG	2 cut(s)	437, 903
DpnI	GATC	8 cut(s)	6, 57, 177, 257, 349, 493, 665, 837
DpnII	GATC	8 cut(s)	4, 55, 175, 255, 347, 491, 663, 835
EaeI	YGGCCR	1 cut(s)	594
EciI	GGCGGA	2 cut(s)	156, 184
Eco130I	CCWWGG	1 cut(s)	210
Eco147I	AGGCCT	1 cut(s)	150
Eco24I	GRGCYC	4 cut(s)	233, 290, 638, 656
Eco31I	GGTCTC	2 cut(s)	259, 771
Eco32I	GATATC	1 cut(s)	382
Eco47I	GGWCC	2 cut(s)	540, 755
Eco88I	CYCGRG	5 cut(s)	270, 324, 487, 761, 770
Eco91I	GGTNACC	1 cut(s)	499
EcoO109I	RGGNCCY	1 cut(s)	540
EcoO65I	GGTNACC	1 cut(s)	499
EcoRII	CCWGG	4 cut(s)	407, 591, 609, 642
EcoRV	GATATC	1 cut(s)	382
EcoT14I	CCWWGG	1 cut(s)	210
EcoT38I	GRGCYC	4 cut(s)	233, 290, 638, 656
ErhI	CCWWGG	1 cut(s)	210
Esp3I	CGTCTC	1 cut(s)	400
FaeI	CATG	6 cut(s)	23, 361, 388, 670, 863, 891
FaqI	GGGAC	1 cut(s)	341
FatI	CATG	6 cut(s)	19, 357, 384, 666, 859, 887
FauI	CCCGC	3 cut(s)	277, 289, 570
FbaI	TGATCA	1 cut(s)	663
FblI	GTMKAC	1 cut(s)	877
FokI	GGATG	3 cut(s)	54, 419, 877
FriOI	GRGCYC	4 cut(s)	233, 290, 638, 656
FspBI	CTAG	1 cut(s)	51
GlaI	GCGC	3 cut(s)	173, 334, 413
GsuI	CTGGAG	1 cut(s)	731
HaeII	RGCGCY	1 cut(s)	336
HaeIII	GGCC	8 cut(s)	150, 276, 302, 482, 596, 609, 636, 654
HapII	CCGG	9 cut(s)	243, 271, 325, 479, 488, 537, 597, 656, 771
HgaI	GACGC	4 cut(s)	14, 382, 561, 663
HhaI	GCGC	3 cut(s)	174, 335, 414
Hin1I	GRCGYC	1 cut(s)	25
Hin1II	CATG	6 cut(s)	23, 361, 388, 670, 863, 891
Hin6I	GCGC	3 cut(s)	172, 333, 412
HinP1I	GCGC	3 cut(s)	172, 333, 412
HinfI	GANTC	1 cut(s)	805
HpaII	CCGG	9 cut(s)	243, 271, 325, 479, 488, 537, 597, 656, 771
HphI	GGTGA	3 cut(s)	65, 493, 673
Hpy166II	GTNNAC	2 cut(s)	29, 878
Hpy188I	TCNGA	2 cut(s)	118, 347
Hpy188III	TCNNGA	4 cut(s)	51, 179, 259, 710
Hpy8I	GTNNAC	2 cut(s)	29, 878
Hpy99I	CGWCG	2 cut(s)	185, 853
HpyAV	CCTTC	1 cut(s)	209
HpyCH4III	ACNGT	2 cut(s)	454, 849
HpyCH4IV	ACGT	1 cut(s)	354
HpyCH4V	TGCA	6 cut(s)	432, 604, 689, 745, 832, 845
HpyF3I	CTNAG	2 cut(s)	437, 903
HpySE526I	ACGT	1 cut(s)	354
Hsp92I	GRCGYC	1 cut(s)	25
Hsp92II	CATG	6 cut(s)	23, 361, 388, 670, 863, 891
HspAI	GCGC	3 cut(s)	172, 333, 412
KroI	GCCGGC	1 cut(s)	596
KroNI	GCCGGC	1 cut(s)	598
Ksp22I	TGATCA	1 cut(s)	663
KspI	CCGCGG	2 cut(s)	163, 285
Kzo9I	GATC	8 cut(s)	4, 55, 175, 255, 347, 491, 663, 835
LmnI	GCTCC	3 cut(s)	236, 293, 721
LweI	GCATC	4 cut(s)	174, 441, 656, 855
MaeI	CTAG	1 cut(s)	51
MaeII	ACGT	1 cut(s)	354
MaeIII	GTNAC	3 cut(s)	454, 463, 499
MalI	GATC	8 cut(s)	6, 57, 177, 257, 349, 493, 665, 837
MboI	GATC	8 cut(s)	4, 55, 175, 255, 347, 491, 663, 835
MboII	GAAGA	1 cut(s)	131
MfeI	CAATTG	1 cut(s)	893
MflI	RGATCY	4 cut(s)	4, 55, 491, 835
MhlI	GDGCHC	5 cut(s)	233, 290, 638, 656, 920
MluCI	AATT	6 cut(s)	80, 112, 153, 522, 883, 893
MroNI	GCCGGC	1 cut(s)	596
MspA1I	CMGCKG	5 cut(s)	138, 162, 284, 441, 447
MspI	CCGG	9 cut(s)	243, 271, 325, 479, 488, 537, 597, 656, 771
MunI	CAATTG	1 cut(s)	893
MvaI	CCWGG	4 cut(s)	409, 593, 611, 644
MvnI	CGCG	4 cut(s)	162, 174, 180, 284
NaeI	GCCGGC	1 cut(s)	598
NdeII	GATC	8 cut(s)	4, 55, 175, 255, 347, 491, 663, 835
NgoMIV	GCCGGC	1 cut(s)	596
NlaIII	CATG	6 cut(s)	23, 361, 388, 670, 863, 891
NmuCI	GTSAC	3 cut(s)	454, 463, 499
NruI	TCGCGA	1 cut(s)	180
PaqCI	CACCTGC	1 cut(s)	730
PceI	AGGCCT	1 cut(s)	150
PdiI	GCCGGC	1 cut(s)	598
PfeI	GAWTC	1 cut(s)	805
PflFI	GACNNNGTC	1 cut(s)	392
PflMI	CCANNNNNTGG	1 cut(s)	358
Ple19I	CGATCG	1 cut(s)	178
PpuMI	RGGWCCY	1 cut(s)	540
Psp5II	RGGWCCY	1 cut(s)	540
Psp6I	CCWGG	4 cut(s)	407, 591, 609, 642
PspEI	GGTNACC	1 cut(s)	499
PspGI	CCWGG	4 cut(s)	407, 591, 609, 642
PspOMI	GGGCCC	2 cut(s)	634, 652
PspPI	GGNCC	8 cut(s)	274, 540, 607, 634, 635, 652, 653, 755
PspPPI	RGGWCCY	1 cut(s)	540
PsuI	RGATCY	4 cut(s)	4, 55, 491, 835
PsyI	GACNNNGTC	1 cut(s)	392
PvuI	CGATCG	1 cut(s)	178
RgaI	GCGATCGC	1 cut(s)	178
RruI	TCGCGA	1 cut(s)	180
SacII	CCGCGG	2 cut(s)	163, 285
Sau3AI	GATC	8 cut(s)	4, 55, 175, 255, 347, 491, 663, 835
Sau96I	GGNCC	8 cut(s)	274, 540, 607, 634, 635, 652, 653, 755
SduI	GDGCHC	5 cut(s)	233, 290, 638, 656, 920
SfaAI	GCGATCGC	1 cut(s)	178
SfaNI	GCATC	4 cut(s)	174, 441, 656, 855
Sfr303I	CCGCGG	2 cut(s)	163, 285
SgfI	GCGATCGC	1 cut(s)	178
SgrBI	CCGCGG	2 cut(s)	163, 285
SinI	GGWCC	2 cut(s)	540, 755
SmaI	CCCGGG	4 cut(s)	272, 326, 489, 772
Sse9I	AATT	6 cut(s)	80, 112, 153, 522, 883, 893
SseBI	AGGCCT	1 cut(s)	150
SspMI	CTAG	1 cut(s)	51
StuI	AGGCCT	1 cut(s)	150
StyI	CCWWGG	1 cut(s)	210
TaaI	ACNGT	2 cut(s)	454, 849
TaiI	ACGT	1 cut(s)	357
TaqI	TCGA	1 cut(s)	803
TasI	AATT	6 cut(s)	80, 112, 153, 522, 883, 893
TauI	GCSGC	8 cut(s)	141, 162, 165, 200, 279, 444, 734, 871
TfiI	GAWTC	1 cut(s)	805
TscAI	CASTG	2 cut(s)	36, 244
TseFI	GTSAC	3 cut(s)	454, 463, 499
Tsp45I	GTSAC	3 cut(s)	454, 463, 499
TspDTI	ATGAA	2 cut(s)	848, 876
TspMI	CCCGGG	4 cut(s)	270, 324, 487, 770
TspRI	CASTG	2 cut(s)	36, 244
Tth111I	GACNNNGTC	1 cut(s)	392
Van91I	CCANNNNNTGG	1 cut(s)	358
VpaK11BI	GGWCC	2 cut(s)	540, 755
XapI	RAATTY	2 cut(s)	522, 883
XbaI	TCTAGA	1 cut(s)	50
XcmI	CCANNNNNNNNNTGG	1 cut(s)	208
XmaI	CCCGGG	4 cut(s)	270, 324, 487, 770
XmiI	GTMKAC	1 cut(s)	877
XspI	CTAG	1 cut(s)	51

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.