Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0014195

Physical Location & Seq

Genomic Coordinates Reverse (-)

21743171 .. 21744738

Gene Structure 1568 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G170200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 987 bp

ATGTCAGAAATACCTCAAACTTCTGTTAAACTTCCCATGCTAGACATTTCTCAGCCAATATTGCACCCTTCTTCTTTATCCTCTCTAGCTGAAGCCTTCAAAACATGGGGCTTCTTGCACATCACCAATCATGGGATCTCCAAAGATCTTTTCAGAAAACTATATTCACTTTCAAATGGCCTCTTCAGCCTCCCTTCTGATACTAAACTCAAACTTGGTCCTTTCTCTTCTGCAAAAACTTATACTCCTCATTTCATAGCCTCTCCGTTCTTTGAAAGCCTCAGAGTTTCTGGCCCAAAGTTCTTTGAGTCTGCTCAAACTTCTGCCAATGTTCTCTTTGACCAACACAACTCTGAATTCAGTGAGATATTACAAGAATATGGGAGCAAGATGACAGAATTATCGAAGAAAATCGTGAAGATCGCGCTGATGAGCTTGGGGGATGGTTTGGTAAAGAAATTTTATGAATCTGAATTCCAAAATTGTCATGGTTACTTGAGAATAAATAACTACTCAGCTCCAGAAAGCTTGGAAGATCATGAAGATGAGGTTGAAGGACTTGGAATGCACACAGACATGAGCTGTGTAACAATTGTGTACCAAGATGAAATCGGAGGGCTTCAAGTGAGATCAAAGGAGGGTAAGTGGATGGACATAAGCCCATGTGAGGGGACCTTGGTGGTGAACATAGGGGATATGTTTCAAGCCTGGAGCAATGAGAAGTTAAGGTCATCAGAACATAGAGTCATTCTAAAGCAGCCGGTGAACCGCTTTTCTCTGGCCTACTTTTGGTGTTTTGAAGATGAGAAGGTGATATTTGCACCAGATGATGTGGTGGGGGAAGAGAATGTGAGGATTTACAAGCCATTTGTTTGCTTGGACTATTTGAAATTCAGAGAGAGCAATGAGAGAGGGAAGTTTGAAAAGGTTGGGTTTACTGTAAGGGATTTTGCTGGGATTAAACAGCAAGCCAAATGTGACAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016491 GO:0016705 GO:0016706 GO:0016707 GO:0019752 GO:0023052 GO:0032870 GO:0033993 GO:0042221 GO:0042445 GO:0042446 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0046394 GO:0050789 GO:0050794 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

329

Amino Acids

37.29

Weight (kDa)

5.66

Isoelectric Point (pI)

48.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014195)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23340 AT4G23340
fragaria_vesca	FvH4_7g14240
malus_domestica	MD01G1060300.v1.1 MD07G1137400.v1.1
prunus_persica	Prupe.2G170200_v2.0.a1
pyrus_communis	pycom01g09040
rosa_chinensis	RchiOBHm_Chr1g0355221
rosa_laevigata	RLG00000028170
rosa_multiflora	Rmu_sc0003115.1_g000042
rosa_roxburghii	Rroxscaffold_4G00300580
rosa_rugosa	Rorug01G0245600
rosa_samantha	Rh1AG258100 Rh1BG227700 Rh1CG241800 Rh1DG255500
rosa_wichuraiana	Rw1G022770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	425
AciI	CCGC	1 cut(s)	769
AclWI	GGATC	1 cut(s)	143
AcsI	RAATTY	4 cut(s)	356, 458, 473, 890
AcuI	CTGAAG	2 cut(s)	111, 169
AfaI	GTAC	1 cut(s)	599
AfiI	CCNNNNNNNGG	4 cut(s)	132, 667, 668, 789
AgsI	TTSAA	9 cut(s)	100, 174, 275, 554, 623, 704, 800, 889, 923
AjnI	CCWGG	1 cut(s)	707
AjuI	GAANNNNNNNTTGG	2 cut(s)	134, 166
AluBI	AGCT	5 cut(s)	89, 435, 518, 528, 582
AluI	AGCT	5 cut(s)	89, 435, 518, 528, 582
AlwI	GGATC	1 cut(s)	143
AoxI	GGCC	3 cut(s)	178, 292, 780
ApeKI	GCWGC	1 cut(s)	757
ApoI	RAATTY	4 cut(s)	356, 458, 473, 890
AspLEI	GCGC	1 cut(s)	427
AspS9I	GGNCC	3 cut(s)	218, 293, 672
AsuHPI	GGTGA	4 cut(s)	115, 694, 775, 823
AvaII	GGWCC	2 cut(s)	218, 672
BbvI	GCAGC	1 cut(s)	769
BccI	CCATC	2 cut(s)	437, 643
BciT130I	CCWGG	1 cut(s)	709
BfaI	CTAG	2 cut(s)	41, 86
BglII	AGATCT	1 cut(s)	145
BisI	GCNGC	1 cut(s)	758
BlsI	GCNGC	1 cut(s)	759
Bme1390I	CCNGG	1 cut(s)	709
Bme18I	GGWCC	2 cut(s)	218, 672
BmgT120I	GGNCC	3 cut(s)	218, 293, 672
BmiI	GGNNCC	1 cut(s)	673
BmrFI	CCNGG	1 cut(s)	709
BpmI	CTGGAG	2 cut(s)	504, 730
BpuEI	CTTGAG	1 cut(s)	517
BsaJI	CCNNGG	1 cut(s)	675
BsaXI	ACNNNNNCTCC	4 cut(s)	229, 259, 629, 659
Bsc4I	CCNNNNNNNGG	4 cut(s)	132, 667, 668, 789
Bse118I	RCCGGY	1 cut(s)	760
Bse3DI	GCAATG	2 cut(s)	721, 910
BseBI	CCWGG	1 cut(s)	709
BseDI	CCNNGG	1 cut(s)	675
BseGI	GGATG	2 cut(s)	448, 654
BseLI	CCNNNNNNNGG	4 cut(s)	132, 667, 668, 789
BseMI	GCAATG	2 cut(s)	721, 910
BseMII	CTCAG	3 cut(s)	65, 295, 528
BseRI	GAGGAG	1 cut(s)	237
BseXI	GCAGC	1 cut(s)	769
BseYI	CCCAGC	1 cut(s)	953
Bsh1236I	CGCG	1 cut(s)	425
BshFI	GGCC	3 cut(s)	180, 294, 782
BsiSI	CCGG	1 cut(s)	761
BslFI	GGGAC	1 cut(s)	685
BslI	CCNNNNNNNGG	4 cut(s)	132, 667, 668, 789
BsmFI	GGGAC	1 cut(s)	685
BsmI	GAATGC	1 cut(s)	570
BsnI	GGCC	3 cut(s)	180, 294, 782
Bsp143I	GATC	5 cut(s)	135, 145, 420, 535, 629
BspACI	CCGC	1 cut(s)	769
BspANI	GGCC	3 cut(s)	180, 294, 782
BspCNI	CTCAG	3 cut(s)	64, 294, 527
BspFNI	CGCG	1 cut(s)	425
BspHI	TCATGA	1 cut(s)	538
BspLI	GGNNCC	1 cut(s)	673
BspPI	GGATC	1 cut(s)	143
BsrDI	GCAATG	2 cut(s)	721, 910
BsrFI	RCCGGY	1 cut(s)	760
BssAI	RCCGGY	1 cut(s)	760
BssECI	CCNNGG	1 cut(s)	675
BssMI	GATC	5 cut(s)	135, 145, 420, 535, 629
BssT1I	CCWWGG	1 cut(s)	675
Bst2UI	CCWGG	1 cut(s)	709
Bst4CI	ACNGT	2 cut(s)	940, 983
Bst6I	CTCTTC	3 cut(s)	188, 232, 837
BstC8I	GCNNGC	1 cut(s)	969
BstDEI	CTNAG	3 cut(s)	51, 281, 514
BstF5I	GGATG	2 cut(s)	448, 654
BstFNI	CGCG	1 cut(s)	425
BstHHI	GCGC	1 cut(s)	427
BstKTI	GATC	5 cut(s)	138, 148, 423, 538, 632
BstMBI	GATC	5 cut(s)	135, 145, 420, 535, 629
BstMWI	GCNNNNNNNGC	2 cut(s)	61, 186
BstNI	CCWGG	1 cut(s)	709
BstSCI	CCNGG	1 cut(s)	707
BstUI	CGCG	1 cut(s)	425
BstV1I	GCAGC	1 cut(s)	769
BstX2I	RGATCY	2 cut(s)	135, 145
BstYI	RGATCY	2 cut(s)	135, 145
BsuRI	GGCC	3 cut(s)	180, 294, 782
BtsCI	GGATG	2 cut(s)	448, 654
BtsIMutI	CAGTG	1 cut(s)	367
Cac8I	GCNNGC	1 cut(s)	969
CciI	TCATGA	1 cut(s)	538
CfoI	GCGC	1 cut(s)	427
Cfr10I	RCCGGY	1 cut(s)	760
Cfr13I	GGNCC	3 cut(s)	218, 293, 672
Csp6I	GTAC	1 cut(s)	598
CviAII	CATG	7 cut(s)	37, 105, 131, 488, 539, 577, 663
CviQI	GTAC	1 cut(s)	598
DdeI	CTNAG	3 cut(s)	51, 281, 514
DpnI	GATC	5 cut(s)	137, 147, 422, 537, 631
DpnII	GATC	5 cut(s)	135, 145, 420, 535, 629
Eam1104I	CTCTTC	3 cut(s)	188, 232, 837
EarI	CTCTTC	3 cut(s)	188, 232, 837
Eco130I	CCWWGG	1 cut(s)	675
Eco47I	GGWCC	2 cut(s)	218, 672
Eco57I	CTGAAG	2 cut(s)	111, 169
EcoO109I	RGGNCCY	1 cut(s)	672
EcoRI	GAATTC	2 cut(s)	356, 473
EcoRII	CCWGG	1 cut(s)	707
EcoT14I	CCWWGG	1 cut(s)	675
ErhI	CCWWGG	1 cut(s)	675
FaeI	CATG	7 cut(s)	40, 108, 134, 491, 542, 580, 666
FaqI	GGGAC	1 cut(s)	685
FatI	CATG	7 cut(s)	36, 104, 130, 487, 538, 576, 662
Fnu4HI	GCNGC	1 cut(s)	758
FokI	GGATG	2 cut(s)	455, 661
Fsp4HI	GCNGC	1 cut(s)	758
FspBI	CTAG	2 cut(s)	41, 86
GlaI	GCGC	1 cut(s)	426
GluI	GCNGC	1 cut(s)	758
GsaI	CCCAGC	1 cut(s)	957
GsuI	CTGGAG	2 cut(s)	504, 730
HaeIII	GGCC	3 cut(s)	180, 294, 782
HapII	CCGG	1 cut(s)	761
HhaI	GCGC	1 cut(s)	427
Hin1II	CATG	7 cut(s)	40, 108, 134, 491, 542, 580, 666
Hin6I	GCGC	1 cut(s)	425
HinP1I	GCGC	1 cut(s)	425
HindIII	AAGCTT	1 cut(s)	526
HinfI	GANTC	3 cut(s)	308, 467, 744
HpaII	CCGG	1 cut(s)	761
HphI	GGTGA	4 cut(s)	115, 694, 775, 823
Hpy166II	GTNNAC	4 cut(s)	598, 685, 766, 936
Hpy188I	TCNGA	9 cut(s)	7, 155, 199, 284, 355, 472, 614, 736, 896
Hpy188III	TCNNGA	3 cut(s)	415, 521, 539
Hpy8I	GTNNAC	4 cut(s)	598, 685, 766, 936
HpyAV	CCTTC	5 cut(s)	78, 106, 204, 548, 802
HpyCH4III	ACNGT	2 cut(s)	940, 983
HpyCH4V	TGCA	5 cut(s)	64, 118, 233, 568, 821
HpyF10VI	GCNNNNNNNGC	2 cut(s)	61, 186
HpyF3I	CTNAG	3 cut(s)	51, 281, 514
Hsp92II	CATG	7 cut(s)	40, 108, 134, 491, 542, 580, 666
HspAI	GCGC	1 cut(s)	425
Kzo9I	GATC	5 cut(s)	135, 145, 420, 535, 629
LmnI	GCTCC	3 cut(s)	384, 523, 711
LpnPI	CCDG	8 cut(s)	276, 534, 694, 721, 764, 774, 837, 939
Lsp1109I	GCAGC	1 cut(s)	769
MaeI	CTAG	2 cut(s)	41, 86
MaeIII	GTNAC	3 cut(s)	491, 586, 977
MalI	GATC	5 cut(s)	137, 147, 422, 537, 631
MboI	GATC	5 cut(s)	135, 145, 420, 535, 629
MboII	GAAGA	9 cut(s)	63, 175, 219, 418, 430, 545, 554, 812, 854
MfeI	CAATTG	1 cut(s)	591
MflI	RGATCY	2 cut(s)	135, 145
MluCI	AATT	7 cut(s)	356, 398, 458, 473, 481, 591, 890
MlyI	GAGTC	2 cut(s)	317, 753
MseI	TTAA	3 cut(s)	27, 725, 960
MslI	CAYNNNNRTG	2 cut(s)	543, 575
MspI	CCGG	1 cut(s)	761
MspR9I	CCNGG	1 cut(s)	709
MunI	CAATTG	1 cut(s)	591
Mva1269I	GAATGC	1 cut(s)	570
MvaI	CCWGG	1 cut(s)	709
MvnI	CGCG	1 cut(s)	425
MwoI	GCNNNNNNNGC	2 cut(s)	61, 186
NdeII	GATC	5 cut(s)	135, 145, 420, 535, 629
NlaIII	CATG	7 cut(s)	40, 108, 134, 491, 542, 580, 666
NlaIV	GGNNCC	1 cut(s)	673
NmuCI	GTSAC	1 cut(s)	977
PagI	TCATGA	1 cut(s)	538
PctI	GAATGC	1 cut(s)	570
PfeI	GAWTC	1 cut(s)	467
PkrI	GCNGC	1 cut(s)	759
PleI	GAGTC	2 cut(s)	316, 752
PpsI	GAGTC	2 cut(s)	316, 752
PpuMI	RGGWCCY	1 cut(s)	672
Psp5II	RGGWCCY	1 cut(s)	672
Psp6I	CCWGG	1 cut(s)	707
PspFI	CCCAGC	1 cut(s)	953
PspGI	CCWGG	1 cut(s)	707
PspN4I	GGNNCC	1 cut(s)	673
PspPI	GGNCC	3 cut(s)	218, 293, 672
PspPPI	RGGWCCY	1 cut(s)	672
PsuI	RGATCY	2 cut(s)	135, 145
RsaI	GTAC	1 cut(s)	599
RsaNI	GTAC	1 cut(s)	598
RseI	CAYNNNNRTG	2 cut(s)	543, 575
SaqAI	TTAA	3 cut(s)	27, 725, 960
SatI	GCNGC	1 cut(s)	758
Sau3AI	GATC	5 cut(s)	135, 145, 420, 535, 629
Sau96I	GGNCC	3 cut(s)	218, 293, 672
SchI	GAGTC	2 cut(s)	317, 753
ScrFI	CCNGG	1 cut(s)	709
SinI	GGWCC	2 cut(s)	218, 672
SmiMI	CAYNNNNRTG	2 cut(s)	543, 575
SmlI	CTYRAG	1 cut(s)	496
SmoI	CTYRAG	1 cut(s)	496
Sse9I	AATT	7 cut(s)	356, 398, 458, 473, 481, 591, 890
SsiI	CCGC	1 cut(s)	769
SspI	AATATT	1 cut(s)	60
SspMI	CTAG	2 cut(s)	41, 86
StyD4I	CCNGG	1 cut(s)	707
StyI	CCWWGG	1 cut(s)	675
TaaI	ACNGT	2 cut(s)	940, 983
TaqI	TCGA	1 cut(s)	404
TasI	AATT	7 cut(s)	356, 398, 458, 473, 481, 591, 890
TfiI	GAWTC	1 cut(s)	467
Tru1I	TTAA	3 cut(s)	27, 725, 960
Tru9I	TTAA	3 cut(s)	27, 725, 960
TscAI	CASTG	1 cut(s)	367
TseFI	GTSAC	1 cut(s)	977
TseI	GCWGC	1 cut(s)	757
Tsp45I	GTSAC	1 cut(s)	977
TspDTI	ATGAA	4 cut(s)	244, 480, 555, 621
TspGWI	ACGGA	1 cut(s)	255
TspRI	CASTG	1 cut(s)	367
VpaK11BI	GGWCC	2 cut(s)	218, 672
XapI	RAATTY	4 cut(s)	356, 458, 473, 890
XcmI	CCANNNNNNNNNTGG	1 cut(s)	485
XspI	CTAG	2 cut(s)	41, 86

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.