Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0006718

Physical Location & Seq

Genomic Coordinates Forward (+)

22462519 .. 22465897

Gene Structure 3379 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G181900.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1287 bp

ATGCTGAGAGAAGTATTCTTTTTTCTGATAACTTCACCTTCTGGGTTTTTCTGTTTACTCTTCTTGATCATGGAGGGAGAAACATCATGGTTTAGCCATTCCCTTGATGACATGGCCAGAGAGATTGGGGAGTTTGATTCTTTCTCAGAGCTCAGTGACGAAGGGAATAAAGAAGCTACTGCAGTTTCGGTGGATTTGATTCTTCCTGATGACCTGTTGGAACGGATATTAGCCTATCTACCAGTTGCAAGCATTTTCAGGGCACGTTGTGTGTGCAAAAGGTGGTATGAGATTGTTAGTTCAAAAAGGTTTCTATGGAACTTTTCACGTGTGCTATCACAAAAACCCTGGTATTTTATGTTTACCAGCTCTAATGAACCAACTGGTTATGCATATGATCCTATCCTCAGAAAGTGGTATGGCATTGAACTCCCCTGCATTGAGACATCTAATTGGTTTATTGCTTCATCATGTGGTTTGGTTTGCTTTATGGACAATGATAGTAGAACTGAGTTATATGTCTGCAACCCTATTACCAAAACACGCAGGAAGCTTCGGGACCCCCCTGGCTTGAGATTTTCTGATTACAGTGCACTTGCAGTTTCTGTTAACAGGAAGTCACATGGTTATACTATCTCAATTGTGAAATCTAAGCAAGTTACTGGGAATTTTTTCCAATGGGATGTCTCCGTTCATATTTATGATTCAGAAACAATGATGTGGGTGACCACTTTGACAGAGGTTCTGACAGGATGGAGAGGTGGGGATGAGAGTGTAATCTGTGATGGGGTTTTGTACTTCTTAATTTACTCAACTGGGGGTGGGTCACCGGAAAATCGTCATGGTCTAATCACATATAATCTCTCTTCTTGTTCTCCTCCTGGGTTGTTGATAAGGAGCTTTATTCCTGTACCTTGCCCTCTTACATGTGGCCGTCTGATGAACTTGAAGGAGAAGCTGGTTATGGTGGGAGGGATTGGTAAACAGGATCGGCCTGACATAATTAAGGGGATTGGTATCTGGGTTCTAAATGGGAAGGCATGGCAAGAGATTGCGAGAATGCCGCATAAGTTTTTCCAAGGATTTGGGGAATTTGATGATGTTTTCGCCAGCAGTGGCACAGATGATCTTATATACATCCAGAGCTATGGAGCTCCAGCTCTTCTTGTCTTTGACATGAGCCAGAGACATTGGAGATGGTCACAGAAGTGCCCGGTAACAAAGAGGTTTCCACTTCAGCTCTTTACTGGTTTTTGTTTTGAACCGAGGCTTGAAATTTCTCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0032501 GO:0032502 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048731 GO:0048856 GO:0070647 GO:0071704 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like

Protein Analysis

429

Amino Acids

48.9

Weight (kDa)

6.13

Isoelectric Point (pI)

49.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006718)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61590 AT3G61590 AT3G61590 AT3G61590
fragaria_vesca	FvH4_7g15730 FvH4_7g15730 FvH4_7g15730
malus_domestica	MD01G1073800.v1.1 MD07G1142500.v1.1
prunus_persica	Prupe.2G181900_v2.0.a1 Prupe.2G181900_v2.0.a1
pyrus_communis	pycom01g10300 pycom07g14130
rosa_chinensis	RchiOBHm_Chr1g0358441
rosa_laevigata	RLG00000002357 RLG00000027959
rosa_multiflora	Rmu_co8469433.1_g000001 Rmu_sc0008220.1_g000002
rosa_roxburghii	Rroxscaffold_4G00297920
rosa_rugosa	Rorug01G0262000
rosa_samantha	Rh1AG276300 Rh1BG242900 Rh1CG260000 Rh1DG271300
rosa_wichuraiana	Rw1G024590 Rw7G028420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	1064
AclWI	GGATC	2 cut(s)	392, 996
AcoI	YGGCCR	2 cut(s)	114, 931
AcsI	RAATTY	3 cut(s)	667, 1091, 1275
AcuI	CTGAAG	1 cut(s)	1220
AcvI	CACGTG	1 cut(s)	329
AdeI	CACNNNGTG	1 cut(s)	269
AfaI	GTAC	2 cut(s)	797, 912
AflIII	ACRYGT	2 cut(s)	328, 926
AgsI	TTSAA	5 cut(s)	303, 428, 949, 1262, 1274
AjnI	CCWGG	3 cut(s)	347, 565, 880
AleI	CACNNNNGTG	1 cut(s)	1207
Alw21I	GWGCWC	3 cut(s)	153, 595, 1156
Alw26I	GTCTC	3 cut(s)	437, 691, 1180
Alw44I	GTGCAC	1 cut(s)	591
AlwI	GGATC	2 cut(s)	392, 996
AlwNI	CAGNNNCTG	1 cut(s)	605
AoxI	GGCC	3 cut(s)	114, 931, 992
ApaLI	GTGCAC	1 cut(s)	591
ApoI	RAATTY	3 cut(s)	667, 1091, 1275
Asp700I	GAANNNNTTC	1 cut(s)	671
AspS9I	GGNCC	1 cut(s)	559
AsuC2I	CCSGG	1 cut(s)	1214
AsuHPI	GGTGA	3 cut(s)	27, 736, 819
AvaII	GGWCC	1 cut(s)	559
BaeGI	GKGCMC	3 cut(s)	265, 595, 1214
BalI	TGGCCA	1 cut(s)	116
BanII	GRGCYC	2 cut(s)	153, 1156
BbrPI	CACGTG	1 cut(s)	329
Bbv12I	GWGCWC	3 cut(s)	153, 595, 1156
BccI	CCATC	3 cut(s)	747, 779, 1191
BceAI	ACGGC	1 cut(s)	918
BciT130I	CCWGG	3 cut(s)	349, 567, 882
BclI	TGATCA	1 cut(s)	66
BcnI	CCSGG	1 cut(s)	1214
BcoDI	GTCTC	3 cut(s)	437, 691, 1180
BfmI	CTRYAG	1 cut(s)	180
BisI	GCNGC	1 cut(s)	1064
BlsI	GCNGC	1 cut(s)	1065
Bme1390I	CCNGG	4 cut(s)	349, 567, 882, 1214
Bme18I	GGWCC	1 cut(s)	559
BmgT120I	GGNCC	1 cut(s)	559
BmiI	GGNNCC	2 cut(s)	560, 561
BmrFI	CCNGG	4 cut(s)	349, 567, 882, 1214
BmrI	ACTGGG	2 cut(s)	672, 825
BmuI	ACTGGG	2 cut(s)	672, 825
BpmI	CTGGAG	1 cut(s)	1140
BpuEI	CTTGAG	1 cut(s)	592
BpuMI	CCSGG	1 cut(s)	1214
BsaAI	YACGTR	1 cut(s)	329
BsaBI	GATNNNNATC	1 cut(s)	1016
BsaJI	CCNNGG	5 cut(s)	347, 565, 881, 1078, 1265
BsaWI	WCCGGW	1 cut(s)	829
Bse1I	ACTGG	5 cut(s)	242, 388, 667, 820, 1252
Bse8I	GATNNNNATC	1 cut(s)	1016
BseBI	CCWGG	3 cut(s)	349, 567, 882
BseDI	CCNNGG	5 cut(s)	347, 565, 881, 1078, 1265
BseGI	GGATG	4 cut(s)	688, 758, 772, 1137
BseJI	GATNNNNATC	1 cut(s)	1016
BseMII	CTCAG	4 cut(s)	159, 166, 421, 501
BseNI	ACTGG	5 cut(s)	242, 388, 667, 820, 1252
BseRI	GAGGAG	1 cut(s)	867
BseSI	GKGCMC	3 cut(s)	265, 595, 1214
BshFI	GGCC	3 cut(s)	116, 933, 994
BsiHKAI	GWGCWC	3 cut(s)	153, 595, 1156
BsiSI	CCGG	2 cut(s)	830, 1214
BslFI	GGGAC	1 cut(s)	572
BsmAI	GTCTC	3 cut(s)	437, 691, 1180
BsmFI	GGGAC	1 cut(s)	572
BsmI	GAATGC	1 cut(s)	1065
BsnI	GGCC	3 cut(s)	116, 933, 994
Bsp1286I	GDGCHC	5 cut(s)	153, 265, 595, 1156, 1214
Bsp143I	GATC	4 cut(s)	66, 397, 988, 1126
BspACI	CCGC	1 cut(s)	1064
BspANI	GGCC	3 cut(s)	116, 933, 994
BspCNI	CTCAG	4 cut(s)	158, 165, 420, 502
BspLI	GGNNCC	2 cut(s)	560, 561
BspMAI	CTGCAG	1 cut(s)	184
BspPI	GGATC	2 cut(s)	392, 996
BspQI	GCTCTTC	1 cut(s)	1167
BsrI	ACTGG	5 cut(s)	242, 388, 667, 820, 1252
BssECI	CCNNGG	5 cut(s)	347, 565, 881, 1078, 1265
BssMI	GATC	4 cut(s)	66, 397, 988, 1126
BssT1I	CCWWGG	1 cut(s)	1078
Bst2UI	CCWGG	3 cut(s)	349, 567, 882
Bst4CI	ACNGT	1 cut(s)	590
Bst6I	CTCTTC	3 cut(s)	65, 871, 1167
BstBAI	YACGTR	1 cut(s)	329
BstC8I	GCNNGC	2 cut(s)	250, 1111
BstDEI	CTNAG	6 cut(s)	5, 145, 152, 407, 510, 651
BstEII	GGTNACC	2 cut(s)	724, 825
BstF5I	GGATG	4 cut(s)	688, 758, 772, 1137
BstKTI	GATC	4 cut(s)	69, 400, 991, 1129
BstMAI	GTCTC	3 cut(s)	437, 691, 1180
BstMBI	GATC	4 cut(s)	66, 397, 988, 1126
BstNI	CCWGG	3 cut(s)	349, 567, 882
BstNSI	RCATGY	1 cut(s)	930
BstPI	GGTNACC	2 cut(s)	724, 825
BstSCI	CCNGG	4 cut(s)	347, 565, 880, 1212
BstSFI	CTRYAG	1 cut(s)	180
BstSLI	GKGCMC	3 cut(s)	265, 595, 1214
BstXI	CCANNNNNNTGG	2 cut(s)	1085, 1148
BsuRI	GGCC	3 cut(s)	116, 933, 994
BtsCI	GGATG	4 cut(s)	688, 758, 772, 1137
BtsI	GCAGTG	1 cut(s)	1120
BtsIMutI	CAGTG	3 cut(s)	160, 595, 1120
Cac8I	GCNNGC	2 cut(s)	250, 1111
CaiI	CAGNNNCTG	1 cut(s)	605
Cfr13I	GGNCC	1 cut(s)	559
Csp6I	GTAC	2 cut(s)	796, 911
CviAII	CATG	9 cut(s)	70, 87, 112, 471, 623, 842, 927, 1041, 1177
CviQI	GTAC	2 cut(s)	796, 911
DdeI	CTNAG	6 cut(s)	5, 145, 152, 407, 510, 651
DpnI	GATC	4 cut(s)	68, 399, 990, 1128
DpnII	GATC	4 cut(s)	66, 397, 988, 1126
DraIII	CACNNNGTG	1 cut(s)	269
EaeI	YGGCCR	2 cut(s)	114, 931
Eam1104I	CTCTTC	3 cut(s)	65, 871, 1167
EarI	CTCTTC	3 cut(s)	65, 871, 1167
Ecl136II	GAGCTC	2 cut(s)	151, 1154
Eco130I	CCWWGG	1 cut(s)	1078
Eco24I	GRGCYC	2 cut(s)	153, 1156
Eco47I	GGWCC	1 cut(s)	559
Eco53kI	GAGCTC	2 cut(s)	151, 1154
Eco57I	CTGAAG	1 cut(s)	1220
Eco72I	CACGTG	1 cut(s)	329
Eco91I	GGTNACC	2 cut(s)	724, 825
EcoICRI	GAGCTC	2 cut(s)	151, 1154
EcoO109I	RGGNCCY	1 cut(s)	559
EcoO65I	GGTNACC	2 cut(s)	724, 825
EcoRII	CCWGG	3 cut(s)	347, 565, 880
EcoT14I	CCWWGG	1 cut(s)	1078
EcoT22I	ATGCAT	1 cut(s)	394
EcoT38I	GRGCYC	2 cut(s)	153, 1156
ErhI	CCWWGG	1 cut(s)	1078
FaeI	CATG	9 cut(s)	73, 90, 115, 474, 626, 845, 930, 1044, 1180
FaqI	GGGAC	1 cut(s)	572
FatI	CATG	9 cut(s)	69, 86, 111, 470, 622, 841, 926, 1040, 1176
FauNDI	CATATG	1 cut(s)	394
FbaI	TGATCA	1 cut(s)	66
Fnu4HI	GCNGC	1 cut(s)	1064
FokI	GGATG	4 cut(s)	695, 765, 779, 1124
FriOI	GRGCYC	2 cut(s)	153, 1156
Fsp4HI	GCNGC	1 cut(s)	1064
GluI	GCNGC	1 cut(s)	1064
GsuI	CTGGAG	1 cut(s)	1140
HaeIII	GGCC	3 cut(s)	116, 933, 994
HapII	CCGG	2 cut(s)	830, 1214
Hin1II	CATG	9 cut(s)	73, 90, 115, 474, 626, 845, 930, 1044, 1180
HincII	GTYRAC	1 cut(s)	610
HindII	GTYRAC	1 cut(s)	610
HindIII	AAGCTT	1 cut(s)	551
HinfI	GANTC	3 cut(s)	137, 199, 704
HpaI	GTTAAC	1 cut(s)	610
HpaII	CCGG	2 cut(s)	830, 1214
HphI	GGTGA	3 cut(s)	27, 736, 819
Hpy166II	GTNNAC	5 cut(s)	56, 363, 593, 610, 983
Hpy188I	TCNGA	7 cut(s)	27, 148, 410, 583, 709, 747, 939
Hpy188III	TCNNGA	4 cut(s)	64, 206, 557, 1141
Hpy8I	GTNNAC	5 cut(s)	56, 363, 593, 610, 983
HpyAV	CCTTC	4 cut(s)	48, 155, 943, 1030
HpyCH4III	ACNGT	1 cut(s)	590
HpyCH4IV	ACGT	2 cut(s)	265, 328
HpyCH4V	TGCA	8 cut(s)	182, 248, 276, 392, 438, 525, 593, 599
HpyF3I	CTNAG	6 cut(s)	5, 145, 152, 407, 510, 651
HpySE526I	ACGT	2 cut(s)	265, 328
Hsp92II	CATG	9 cut(s)	73, 90, 115, 474, 626, 845, 930, 1044, 1180
KflI	GGGWCCC	1 cut(s)	559
Ksp22I	TGATCA	1 cut(s)	66
KspAI	GTTAAC	1 cut(s)	610
Kzo9I	GATC	4 cut(s)	66, 397, 988, 1126
LguI	GCTCTTC	1 cut(s)	1167
LmnI	GCTCC	3 cut(s)	897, 1151, 1159
MaeII	ACGT	2 cut(s)	265, 328
MaeIII	GTNAC	7 cut(s)	155, 618, 658, 724, 825, 1200, 1216
MalI	GATC	4 cut(s)	68, 399, 990, 1128
MboI	GATC	4 cut(s)	66, 397, 988, 1126
MboII	GAAGA	4 cut(s)	52, 194, 858, 1154
MfeI	CAATTG	1 cut(s)	639
MhlI	GDGCHC	5 cut(s)	153, 265, 595, 1156, 1214
MlsI	TGGCCA	1 cut(s)	116
MluCI	AATT	7 cut(s)	451, 639, 667, 804, 1002, 1091, 1275
MluNI	TGGCCA	1 cut(s)	116
MmeI	TCCRAC	1 cut(s)	198
MnlI	CCTC	9 cut(s)	67, 416, 733, 752, 888, 930, 965, 1218, 1260
Mox20I	TGGCCA	1 cut(s)	116
Mph1103I	ATGCAT	1 cut(s)	394
MroXI	GAANNNNTTC	1 cut(s)	671
MscI	TGGCCA	1 cut(s)	116
MseI	TTAA	3 cut(s)	609, 803, 1005
MslI	CAYNNNNRTG	2 cut(s)	699, 1207
Msp20I	TGGCCA	1 cut(s)	116
MspI	CCGG	2 cut(s)	830, 1214
MspR9I	CCNGG	4 cut(s)	349, 567, 882, 1214
MunI	CAATTG	1 cut(s)	639
Mva1269I	GAATGC	1 cut(s)	1065
MvaI	CCWGG	3 cut(s)	349, 567, 882
NciI	CCSGG	1 cut(s)	1214
NdeI	CATATG	1 cut(s)	394
NdeII	GATC	4 cut(s)	66, 397, 988, 1126
NlaIII	CATG	9 cut(s)	73, 90, 115, 474, 626, 845, 930, 1044, 1180
NlaIV	GGNNCC	2 cut(s)	560, 561
NmuCI	GTSAC	5 cut(s)	155, 618, 724, 825, 1200
NsiI	ATGCAT	1 cut(s)	394
NspI	RCATGY	1 cut(s)	930
OliI	CACNNNNGTG	1 cut(s)	1207
PciI	ACATGT	1 cut(s)	926
PciSI	GCTCTTC	1 cut(s)	1167
PctI	GAATGC	1 cut(s)	1065
PdmI	GAANNNNTTC	1 cut(s)	671
PfeI	GAWTC	3 cut(s)	137, 199, 704
PkrI	GCNGC	1 cut(s)	1065
PmaCI	CACGTG	1 cut(s)	329
PmlI	CACGTG	1 cut(s)	329
Ppu21I	YACGTR	1 cut(s)	329
PpuMI	RGGWCCY	1 cut(s)	559
PscI	ACATGT	1 cut(s)	926
Psp124BI	GAGCTC	2 cut(s)	153, 1156
Psp5II	RGGWCCY	1 cut(s)	559
Psp6I	CCWGG	3 cut(s)	347, 565, 880
PspCI	CACGTG	1 cut(s)	329
PspEI	GGTNACC	2 cut(s)	724, 825
PspGI	CCWGG	3 cut(s)	347, 565, 880
PspN4I	GGNNCC	2 cut(s)	560, 561
PspPI	GGNCC	1 cut(s)	559
PspPPI	RGGWCCY	1 cut(s)	559
PstI	CTGCAG	1 cut(s)	184
PstNI	CAGNNNCTG	1 cut(s)	605
RsaI	GTAC	2 cut(s)	797, 912
RsaNI	GTAC	2 cut(s)	796, 911
RseI	CAYNNNNRTG	2 cut(s)	699, 1207
SacI	GAGCTC	2 cut(s)	153, 1156
SapI	GCTCTTC	1 cut(s)	1167
SaqAI	TTAA	3 cut(s)	609, 803, 1005
SatI	GCNGC	1 cut(s)	1064
Sau3AI	GATC	4 cut(s)	66, 397, 988, 1126
Sau96I	GGNCC	1 cut(s)	559
ScrFI	CCNGG	4 cut(s)	349, 567, 882, 1214
SduI	GDGCHC	5 cut(s)	153, 265, 595, 1156, 1214
SfcI	CTRYAG	1 cut(s)	180
SinI	GGWCC	1 cut(s)	559
SmiMI	CAYNNNNRTG	2 cut(s)	699, 1207
SmlI	CTYRAG	1 cut(s)	571
SmoI	CTYRAG	1 cut(s)	571
Sse9I	AATT	7 cut(s)	451, 639, 667, 804, 1002, 1091, 1275
SsiI	CCGC	1 cut(s)	1064
SstI	GAGCTC	2 cut(s)	153, 1156
StyD4I	CCNGG	4 cut(s)	347, 565, 880, 1212
StyI	CCWWGG	1 cut(s)	1078
TaaI	ACNGT	1 cut(s)	590
TaiI	ACGT	2 cut(s)	268, 331
TasI	AATT	7 cut(s)	451, 639, 667, 804, 1002, 1091, 1275
TatI	WGTACW	1 cut(s)	795
TauI	GCSGC	1 cut(s)	1066
TfiI	GAWTC	3 cut(s)	137, 199, 704
Tru1I	TTAA	3 cut(s)	609, 803, 1005
Tru9I	TTAA	3 cut(s)	609, 803, 1005
TscAI	CASTG	3 cut(s)	160, 595, 1120
TseFI	GTSAC	5 cut(s)	155, 618, 724, 825, 1200
Tsp45I	GTSAC	5 cut(s)	155, 618, 724, 825, 1200
TspDTI	ATGAA	4 cut(s)	390, 456, 683, 956
TspGWI	ACGGA	2 cut(s)	238, 679
TspRI	CASTG	3 cut(s)	160, 595, 1120
VneI	GTGCAC	1 cut(s)	591
VpaK11BI	GGWCC	1 cut(s)	559
XapI	RAATTY	3 cut(s)	667, 1091, 1275
XceI	RCATGY	1 cut(s)	930
XmnI	GAANNNNTTC	1 cut(s)	671
Zsp2I	ATGCAT	1 cut(s)	394

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.