Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0012432

Physical Location & Seq

Genomic Coordinates Reverse (-)

22911183 .. 22913393

Gene Structure 2211 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G189500.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 693 bp

ATGTTTCTTCGGAGACTTGCAGTAGCATCTTCTCGCTCGAGACGGTTTCTTAGCTGTAATAGCAGCCATGATCTTGCAAGAACTATTGCTGAGCTTAATAAGGAAATGGAATCCGTGTTTGGTGAACCTCCAGCAAATGGGCCTGCCAGTTCTCCGAGTAATGATTTTATGCCTCAAGAACCCCAGTTAGCACCTCAAGAAAAAGGCGACAGTGAACTTGGCCTAACCCACATTGGCAATAAAGGGGAAGCCCAAATGGTGGATGTTTCTCCCAAAGAAAGCAGTAAGAGAACTGCCATTTCTAGTGGCAAGGTAATTCTTGGAAAGCAGGTGTTTGATTTGGTCTTAGCTAACCAGATGGCCAAGGGTGATGTCCTCAGTGTGGCAAAACTTGCTGGAATAAGTGGAGCAAAGCACACAAGTAGTCTCATCCCACTATGCCACAACATACCACTGACCCATGTTCGTGTCGATCTGACACTAAATCCCAAGGATTACAGTGTGGATATTGAGGCAGAAGCCAGTTCAACAGGGAAAACTGGGGTTGAGATGGAAGCAATGACAGCAGTGAGTGTTGCTGGCCTAACAGTCTATGATATGTGCAAAGCTGCCTCCAAATCTATACAGATCACCGATATACGACTCGAGAGTAAAACTGGTGGGAAGAGTGGGGATTGGTCCAGGAAGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00790 ko01100 ko04122 map00790 map01100 map04122

Pfam Domains

Protein Families

MoaC

Protein Analysis

231

Amino Acids

24.54

Weight (kDa)

6.97

Isoelectric Point (pI)

52.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01290 AT1G01290
fragaria_vesca	FvH4_7g16680
malus_domestica	MD07G1150800.v1.1
prunus_persica	Prupe.2G189500_v2.0.a1 Prupe.2G189500_v2.0.a1 Prupe.2G189500_v2.0.a1
pyrus_communis	pycom07g14910
rosa_chinensis	RchiOBHm_Chr1g0359831
rosa_laevigata	RLG00000027850
rosa_multiflora	Rmu_sc0003191.1_g000005 Rmu_ssc0000371.1_g000002
rosa_roxburghii	Rroxscaffold_4G00296780
rosa_rugosa	Rorug01G0272900
rosa_samantha	Rh1AG287000 Rh1BG252800 Rh1CG270000 Rh1DG281800
rosa_wichuraiana	Rw1G025490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	319
Acc36I	ACCTGC	1 cut(s)	319
AccB7I	CCANNNNNTGG	2 cut(s)	137, 259
AcoI	YGGCCR	1 cut(s)	360
AfiI	CCNNNNNNNGG	3 cut(s)	137, 259, 382
AgsI	TTSAA	1 cut(s)	528
AjnI	CCWGG	1 cut(s)	680
AjuI	GAANNNNNNNTTGG	2 cut(s)	102, 134
AluBI	AGCT	4 cut(s)	54, 94, 350, 608
AluI	AGCT	4 cut(s)	54, 94, 350, 608
Alw26I	GTCTC	3 cut(s)	7, 34, 431
Ama87I	CYCGRG	2 cut(s)	37, 644
AoxI	GGCC	4 cut(s)	140, 220, 360, 580
ApeKI	GCWGC	2 cut(s)	63, 608
AspS9I	GGNCC	2 cut(s)	140, 678
AsuHPI	GGTGA	3 cut(s)	134, 380, 622
AvaI	CYCGRG	2 cut(s)	37, 644
AvaII	GGWCC	1 cut(s)	678
BalI	TGGCCA	1 cut(s)	362
BbvI	GCAGC	2 cut(s)	75, 595
BccI	CCATC	2 cut(s)	352, 544
BciT130I	CCWGG	1 cut(s)	682
BcoDI	GTCTC	3 cut(s)	7, 34, 431
BfaI	CTAG	1 cut(s)	303
BfuAI	ACCTGC	1 cut(s)	319
BisI	GCNGC	2 cut(s)	64, 609
BlpI	GCTNAGC	1 cut(s)	90
BlsI	GCNGC	2 cut(s)	65, 610
Bme1390I	CCNGG	1 cut(s)	682
Bme18I	GGWCC	1 cut(s)	678
BmeT110I	CYCGRG	2 cut(s)	37, 644
BmgT120I	GGNCC	2 cut(s)	140, 678
BmrFI	CCNGG	1 cut(s)	682
BmrI	ACTGGG	2 cut(s)	178, 549
BmsI	GCATC	1 cut(s)	35
BmuI	ACTGGG	2 cut(s)	178, 549
BpmI	CTGGAG	1 cut(s)	114
Bpu1102I	GCTNAGC	1 cut(s)	90
BpuEI	CTTGAG	2 cut(s)	159, 180
BsaJI	CCNNGG	2 cut(s)	363, 489
Bsc4I	CCNNNNNNNGG	3 cut(s)	137, 259, 382
Bse1I	ACTGG	5 cut(s)	147, 184, 522, 544, 661
Bse3DI	GCAATG	1 cut(s)	564
BseBI	CCWGG	1 cut(s)	682
BseDI	CCNNGG	2 cut(s)	363, 489
BseGI	GGATG	2 cut(s)	268, 429
BseLI	CCNNNNNNNGG	3 cut(s)	137, 259, 382
BseMI	GCAATG	1 cut(s)	564
BseMII	CTCAG	2 cut(s)	81, 391
BseNI	ACTGG	5 cut(s)	147, 184, 522, 544, 661
BseXI	GCAGC	2 cut(s)	75, 595
BshFI	GGCC	4 cut(s)	142, 222, 362, 582
BsiHKCI	CYCGRG	2 cut(s)	37, 644
BslI	CCNNNNNNNGG	3 cut(s)	137, 259, 382
BsmAI	GTCTC	3 cut(s)	7, 34, 431
BsmBI	CGTCTC	1 cut(s)	34
BsnI	GGCC	4 cut(s)	142, 222, 362, 582
BsoBI	CYCGRG	2 cut(s)	37, 644
Bsp143I	GATC	3 cut(s)	70, 472, 627
Bsp1720I	GCTNAGC	1 cut(s)	90
BspANI	GGCC	4 cut(s)	142, 222, 362, 582
BspCNI	CTCAG	2 cut(s)	82, 390
BspMI	ACCTGC	1 cut(s)	319
BsrDI	GCAATG	1 cut(s)	564
BsrI	ACTGG	5 cut(s)	147, 184, 522, 544, 661
BssECI	CCNNGG	2 cut(s)	363, 489
BssMI	GATC	3 cut(s)	70, 472, 627
BssT1I	CCWWGG	2 cut(s)	363, 489
Bst2UI	CCWGG	1 cut(s)	682
Bst4CI	ACNGT	4 cut(s)	45, 212, 500, 589
Bst6I	CTCTTC	1 cut(s)	659
BstAPI	GCANNNNNTGC	1 cut(s)	392
BstC8I	GCNNGC	2 cut(s)	144, 580
BstDEI	CTNAG	4 cut(s)	50, 90, 346, 377
BstF5I	GGATG	2 cut(s)	268, 429
BstKTI	GATC	3 cut(s)	73, 475, 630
BstMAI	GTCTC	3 cut(s)	7, 34, 431
BstMBI	GATC	3 cut(s)	70, 472, 627
BstMWI	GCNNNNNNNGC	3 cut(s)	60, 392, 563
BstNI	CCWGG	1 cut(s)	682
BstSCI	CCNGG	1 cut(s)	680
BstV1I	GCAGC	2 cut(s)	75, 595
BsuRI	GGCC	4 cut(s)	142, 222, 362, 582
BtsCI	GGATG	2 cut(s)	268, 429
BtsI	GCAGTG	1 cut(s)	573
BtsIMutI	CAGTG	5 cut(s)	217, 385, 452, 505, 573
BveI	ACCTGC	1 cut(s)	319
Cac8I	GCNNGC	2 cut(s)	144, 580
Cfr13I	GGNCC	2 cut(s)	140, 678
CviAII	CATG	2 cut(s)	68, 461
DdeI	CTNAG	4 cut(s)	50, 90, 346, 377
DpnI	GATC	3 cut(s)	72, 474, 629
DpnII	GATC	3 cut(s)	70, 472, 627
EaeI	YGGCCR	1 cut(s)	360
Eam1104I	CTCTTC	1 cut(s)	659
EarI	CTCTTC	1 cut(s)	659
Eco130I	CCWWGG	2 cut(s)	363, 489
Eco47I	GGWCC	1 cut(s)	678
Eco88I	CYCGRG	2 cut(s)	37, 644
EcoRII	CCWGG	1 cut(s)	680
EcoT14I	CCWWGG	2 cut(s)	363, 489
ErhI	CCWWGG	2 cut(s)	363, 489
Esp3I	CGTCTC	1 cut(s)	34
FaeI	CATG	2 cut(s)	71, 464
FaiI	YATR	9 cut(s)	69, 170, 439, 449, 462, 594, 599, 623, 638
FatI	CATG	2 cut(s)	67, 460
Fnu4HI	GCNGC	2 cut(s)	64, 609
FokI	GGATG	2 cut(s)	275, 416
Fsp4HI	GCNGC	2 cut(s)	64, 609
FspBI	CTAG	1 cut(s)	303
GluI	GCNGC	2 cut(s)	64, 609
GsuI	CTGGAG	1 cut(s)	114
HaeIII	GGCC	4 cut(s)	142, 222, 362, 582
Hin1II	CATG	2 cut(s)	71, 464
HinfI	GANTC	2 cut(s)	110, 642
HphI	GGTGA	3 cut(s)	134, 380, 622
Hpy166II	GTNNAC	2 cut(s)	125, 215
Hpy188I	TCNGA	3 cut(s)	12, 156, 477
Hpy188III	TCNNGA	4 cut(s)	39, 176, 197, 646
Hpy8I	GTNNAC	2 cut(s)	125, 215
HpyAV	CCTTC	1 cut(s)	679
HpyCH4III	ACNGT	4 cut(s)	45, 212, 500, 589
HpyCH4V	TGCA	3 cut(s)	20, 77, 603
HpyF10VI	GCNNNNNNNGC	3 cut(s)	60, 392, 563
HpyF3I	CTNAG	4 cut(s)	50, 90, 346, 377
Hsp92II	CATG	2 cut(s)	71, 464
Kzo9I	GATC	3 cut(s)	70, 472, 627
LmnI	GCTCC	1 cut(s)	407
Lsp1109I	GCAGC	2 cut(s)	75, 595
LweI	GCATC	1 cut(s)	35
MaeI	CTAG	1 cut(s)	303
MalI	GATC	3 cut(s)	72, 474, 629
MboI	GATC	3 cut(s)	70, 472, 627
MboII	GAAGA	2 cut(s)	21, 676
MlsI	TGGCCA	1 cut(s)	362
MluCI	AATT	1 cut(s)	315
MluNI	TGGCCA	1 cut(s)	362
MlyI	GAGTC	1 cut(s)	636
MnlI	CCTC	6 cut(s)	138, 183, 204, 386, 505, 622
Mox20I	TGGCCA	1 cut(s)	362
MscI	TGGCCA	1 cut(s)	362
MseI	TTAA	1 cut(s)	96
MslI	CAYNNNNRTG	1 cut(s)	465
Msp20I	TGGCCA	1 cut(s)	362
MspR9I	CCNGG	1 cut(s)	682
MvaI	CCWGG	1 cut(s)	682
MwoI	GCNNNNNNNGC	3 cut(s)	60, 392, 563
NdeII	GATC	3 cut(s)	70, 472, 627
NlaIII	CATG	2 cut(s)	71, 464
PaeR7I	CTCGAG	2 cut(s)	37, 644
PaqCI	CACCTGC	1 cut(s)	319
PfeI	GAWTC	1 cut(s)	110
PflMI	CCANNNNNTGG	2 cut(s)	137, 259
PfoI	TCCNGGA	1 cut(s)	680
PkrI	GCNGC	2 cut(s)	65, 610
PleI	GAGTC	1 cut(s)	636
PpsI	GAGTC	1 cut(s)	636
Psp6I	CCWGG	1 cut(s)	680
PspGI	CCWGG	1 cut(s)	680
PspPI	GGNCC	2 cut(s)	140, 678
RseI	CAYNNNNRTG	1 cut(s)	465
SaqAI	TTAA	1 cut(s)	96
SatI	GCNGC	2 cut(s)	64, 609
Sau3AI	GATC	3 cut(s)	70, 472, 627
Sau96I	GGNCC	2 cut(s)	140, 678
SchI	GAGTC	1 cut(s)	636
ScrFI	CCNGG	1 cut(s)	682
SetI	ASST	8 cut(s)	56, 96, 130, 196, 315, 333, 352, 610
SfaNI	GCATC	1 cut(s)	35
Sfr274I	CTCGAG	2 cut(s)	37, 644
SinI	GGWCC	1 cut(s)	678
SlaI	CTCGAG	2 cut(s)	37, 644
SmiMI	CAYNNNNRTG	1 cut(s)	465
SmlI	CTYRAG	4 cut(s)	37, 174, 195, 644
SmoI	CTYRAG	4 cut(s)	37, 174, 195, 644
Sse9I	AATT	1 cut(s)	315
SspMI	CTAG	1 cut(s)	303
StyD4I	CCNGG	1 cut(s)	680
StyI	CCWWGG	2 cut(s)	363, 489
TaaI	ACNGT	4 cut(s)	45, 212, 500, 589
TaqI	TCGA	3 cut(s)	38, 471, 645
TasI	AATT	1 cut(s)	315
TfiI	GAWTC	1 cut(s)	110
Tru1I	TTAA	1 cut(s)	96
Tru9I	TTAA	1 cut(s)	96
TscAI	CASTG	5 cut(s)	217, 385, 459, 505, 573
TseI	GCWGC	2 cut(s)	63, 608
TspGWI	ACGGA	1 cut(s)	103
TspRI	CASTG	5 cut(s)	217, 385, 459, 505, 573
Van91I	CCANNNNNTGG	2 cut(s)	137, 259
VpaK11BI	GGWCC	1 cut(s)	678
XhoI	CTCGAG	2 cut(s)	37, 644
XspI	CTAG	1 cut(s)	303

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.