Prupe.2G210500_v2.0.a1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0014957
Physical Location & Seq
Reverse (-)
24322037 .. 24326101
4065 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G210500.2

Sequence Viewer

Length: 1290 bp
ATGAAGTGTTTTTATTTCTACAACAAAGAGAAGAATGATGAAGCAAAGACTACGAAGTCTACTTCTACTCGTTCCACTTCCCCTTTCTTTTCACTTGATCGTGACCCAAGAAAATCTGGTTCCGAGTCTAATTCTCAGAATGCCACAGAATTTAGCACAGCATCCTCTGCCAAGTCATTTGCAGCATTGTCGCAGCGACAGAGTAATCTCCGAGAATTCACATGCTCAGAGTTAAAAGCAGCAACAAAAAATTTTAGTCTCTCCCTCATGCTTGGAGAGGGTGGGTTTGGTGGTGTGTATAGGGGTGTCATCCGGACCACAGAAGATCCACATAAAAAGATAGATGTTGCTGTTAAACAACTGAGTAAAAGGGGATTTCAGGGCCATAAAGAGTGGGTGACTGAAGTGAATGTTTTAGGGGTTGTTGAACATGCAAATCTTGTCAAACTGTTAGGCTACTGTGCTGAGGATGATGAAAGAGGGATCCAGCGGCTCCTTGTATATGAATATATGCCCAACAGGAGTGTGCAGGATCACTTATCGAGCCGATTTCAGATAGCTCTTCCATGGGGTACAAGAATGAAAATCGCCCAGGATGCTGCTCGTGGCTTAGCATACCTCCATGAAGGGATGGAATTTCAGATTATCTTTAGGGATTTCAAGTCTTCAAACATACTTTTGGATGAACAATGGAATGCCAAGTTATCTGACTTTGGATTGGCTAGACTTGGGCCTTCAGATGGATTGAGCCACGTCTCTACTGCGGTTGTTGGAACAGTAGGGTATGCAGCTCCTGAATACATTCAAACCGGACATCTCACATCTAAAAGTGATGTATGGAGCTATGGAATTTTCCTTTATGAACTCATCACAGGCAGACGACCTGTGGACAGAAACCGACCCAAGAATGAGCAAAAACTCTTGGAATGGGTGAGGCCACACCTCTCTTCAGATCCAAAGAAGTTCCAGTTGATTTTGGATCCAAGGCTTGAAGGGAACTATTCCCTCAAGGCTGCCCAAAAACTAGCAGCTGTGGCCAGCCGGTGCTTGGTGCGACAGCCTAGATCACGCCCGAAAATGAGCGAAGTTGTGGAAATGTTGAACCGAATTATGGAGACAACGGATATGGGAAGCCCCGAATTCCCTCTGAAGGGTGTGGACTCCAAAGATGAATATTACAGAGAGTCCAAAAGAGAGGTTTTAAGAAGGATGTTTGTGGATCCATTGATTGGAGAGAATGGTTGCTTAAATTGGCAAACATGGAGACCAAAGCTTGTGAACACATGTTGA

Protein Analysis

430

Amino Acids

48.71

Weight (kDa)

9.22

Isoelectric Point (pI)

38.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014957)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39110 AT2G39110
fragaria_vesca FvH4_7g18950
malus_domestica MD01G1105200.v1.1
prunus_persica Prupe.2G210500_v2.0.a1 Prupe.2G210500_v2.0.a1
pyrus_communis pycom01g13170 pycom07g16590
rosa_chinensis RchiOBHm_Chr1g0362881
rosa_laevigata RLG00000027615
rosa_multiflora Rmu_sc0001502.1_g000012
rosa_roxburghii Rroxscaffold_4G00293680
rosa_rugosa Rorug01G0302100 Rorug01G0302100
rosa_samantha Rh1BG274200
rosa_wichuraiana Rw1G027580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 55
AccB7I CCANNNNNTGG 1 cut(s) 1229
AccI GTMKAC 1 cut(s) 59
AccIII TCCGGA 1 cut(s) 312
AciI CCGC 2 cut(s) 490, 764
AclWI GGATC 9 cut(s) 320, 478, 491, 540, 947, 974, 987, 1214, 1227
AcoI YGGCCR 1 cut(s) 1035
AcsI RAATTY 6 cut(s) 149, 215, 250, 635, 849, 1139
AcuI CTGAAG 4 cut(s) 423, 720, 933, 1169
AfaI GTAC 1 cut(s) 574
AfiI CCNNNNNNNGG 6 cut(s) 740, 1048, 1111, 1150, 1151, 1229
AflIII ACRYGT 1 cut(s) 1283
AgsI TTSAA 6 cut(s) 428, 661, 669, 806, 992, 1102
AjiI CACGTC 1 cut(s) 754
AjnI CCWGG 1 cut(s) 591
AluBI AGCT 5 cut(s) 560, 791, 843, 1031, 1273
AluI AGCT 5 cut(s) 560, 791, 843, 1031, 1273
Alw26I GTCTC 4 cut(s) 263, 760, 1109, 1258
AlwI GGATC 9 cut(s) 320, 478, 491, 540, 947, 974, 987, 1214, 1227
AlwNI CAGNNNCTG 1 cut(s) 794
Aor13HI TCCGGA 1 cut(s) 312
AoxI GGCC 4 cut(s) 382, 731, 935, 1035
ApeKI GCWGC 7 cut(s) 182, 193, 239, 599, 788, 1013, 1028
ApoI RAATTY 6 cut(s) 149, 215, 250, 635, 849, 1139
Asp700I GAANNNNTTC 1 cut(s) 801
AspS9I GGNCC 3 cut(s) 315, 382, 731
AsuHPI GGTGA 2 cut(s) 409, 943
AvaII GGWCC 1 cut(s) 315
BalI TGGCCA 1 cut(s) 1037
BamHI GGATCC 3 cut(s) 483, 979, 1219
BauI CACGAG 1 cut(s) 603
BbsI GAAGAC 1 cut(s) 657
BbvCI CCTCAGC 1 cut(s) 465
BbvI GCAGC 7 cut(s) 194, 205, 251, 586, 800, 1000, 1040
BccI CCATC 2 cut(s) 625, 734
BcgI CGANNNNNNTGC 2 cut(s) 171, 205
BciT130I CCWGG 1 cut(s) 593
BcoDI GTCTC 4 cut(s) 263, 760, 1109, 1258
BfaI CTAG 3 cut(s) 723, 1025, 1062
BisI GCNGC 8 cut(s) 183, 194, 240, 491, 600, 789, 1014, 1029
BlpI GCTNAGC 1 cut(s) 610
BlsI GCNGC 8 cut(s) 184, 195, 241, 492, 601, 790, 1015, 1030
Bme1390I CCNGG 1 cut(s) 593
Bme18I GGWCC 1 cut(s) 315
BmgBI CACGTC 1 cut(s) 754
BmgT120I GGNCC 3 cut(s) 315, 382, 731
BmiI GGNNCC 5 cut(s) 121, 485, 494, 981, 1221
BmrFI CCNGG 1 cut(s) 593
BmsI GCATC 2 cut(s) 170, 586
BpiI GAAGAC 1 cut(s) 657
Bpu10I CCTNAGC 1 cut(s) 465
Bpu1102I GCTNAGC 1 cut(s) 610
BpuEI CTTGAG 1 cut(s) 992
BsaI GGTCTC 1 cut(s) 1258
BsaJI CCNNGG 3 cut(s) 566, 591, 983
BsaWI WCCGGW 2 cut(s) 312, 809
Bsc4I CCNNNNNNNGG 6 cut(s) 740, 1048, 1111, 1150, 1151, 1229
Bse118I RCCGGY 1 cut(s) 1041
Bse1I ACTGG 1 cut(s) 967
BseAI TCCGGA 1 cut(s) 312
BseBI CCWGG 1 cut(s) 593
BseDI CCNNGG 3 cut(s) 566, 591, 983
BseGI GGATG 7 cut(s) 161, 309, 475, 601, 636, 688, 1215
BseLI CCNNNNNNNGG 6 cut(s) 740, 1048, 1111, 1150, 1151, 1229
BseMII CTCAG 4 cut(s) 149, 240, 353, 456
BseNI ACTGG 1 cut(s) 967
BseXI GCAGC 7 cut(s) 194, 205, 251, 586, 800, 1000, 1040
BsgI GTGCAG 1 cut(s) 548
BshFI GGCC 4 cut(s) 384, 733, 937, 1037
BsiSI CCGG 3 cut(s) 313, 810, 1042
BslI CCNNNNNNNGG 6 cut(s) 740, 1048, 1111, 1150, 1151, 1229
BsmAI GTCTC 4 cut(s) 263, 760, 1109, 1258
BsmBI CGTCTC 1 cut(s) 760
BsmI GAATGC 2 cut(s) 145, 700
BsnI GGCC 4 cut(s) 384, 733, 937, 1037
Bso31I GGTCTC 1 cut(s) 1258
Bsp13I TCCGGA 1 cut(s) 312
Bsp143I GATC 8 cut(s) 97, 325, 483, 532, 952, 979, 1064, 1219
Bsp1720I GCTNAGC 1 cut(s) 610
Bsp19I CCATGG 1 cut(s) 566
BspACI CCGC 2 cut(s) 490, 764
BspANI GGCC 4 cut(s) 384, 733, 937, 1037
BspCNI CTCAG 4 cut(s) 148, 239, 354, 457
BspEI TCCGGA 1 cut(s) 312
BspLI GGNNCC 5 cut(s) 121, 485, 494, 981, 1221
BspPI GGATC 9 cut(s) 320, 478, 491, 540, 947, 974, 987, 1214, 1227
BspQI GCTCTTC 1 cut(s) 567
BspTNI GGTCTC 1 cut(s) 1258
BsrFI RCCGGY 1 cut(s) 1041
BsrI ACTGG 1 cut(s) 967
BssAI RCCGGY 1 cut(s) 1041
BssECI CCNNGG 3 cut(s) 566, 591, 983
BssMI GATC 8 cut(s) 97, 325, 483, 532, 952, 979, 1064, 1219
BssSI CACGAG 1 cut(s) 603
BssT1I CCWWGG 2 cut(s) 566, 983
Bst2BI CACGAG 1 cut(s) 603
Bst2UI CCWGG 1 cut(s) 593
Bst4CI ACNGT 3 cut(s) 450, 461, 778
Bst6I CTCTTC 2 cut(s) 567, 952
BstAPI GCANNNNNTGC 1 cut(s) 167
BstC8I GCNNGC 1 cut(s) 1039
BstDEI CTNAG 5 cut(s) 135, 226, 362, 465, 610
BstDSI CCRYGG 1 cut(s) 566
BstF5I GGATG 7 cut(s) 161, 309, 475, 601, 636, 688, 1215
BstKTI GATC 8 cut(s) 100, 328, 486, 535, 955, 982, 1067, 1222
BstMAI GTCTC 4 cut(s) 263, 760, 1109, 1258
BstMBI GATC 8 cut(s) 97, 325, 483, 532, 952, 979, 1064, 1219
BstMWI GCNNNNNNNGC 3 cut(s) 167, 596, 1034
BstNI CCWGG 1 cut(s) 593
BstNSI RCATGY 3 cut(s) 225, 434, 1287
BstSCI CCNGG 1 cut(s) 591
BstV1I GCAGC 7 cut(s) 194, 205, 251, 586, 800, 1000, 1040
BstV2I GAAGAC 1 cut(s) 657
BstX2I RGATCY 5 cut(s) 325, 483, 952, 979, 1219
BstYI RGATCY 5 cut(s) 325, 483, 952, 979, 1219
BsuRI GGCC 4 cut(s) 384, 733, 937, 1037
BtgI CCRYGG 1 cut(s) 566
BtrI CACGTC 1 cut(s) 754
BtsCI GGATG 7 cut(s) 161, 309, 475, 601, 636, 688, 1215
Cac8I GCNNGC 1 cut(s) 1039
CaiI CAGNNNCTG 1 cut(s) 794
Cfr10I RCCGGY 1 cut(s) 1041
Cfr13I GGNCC 3 cut(s) 315, 382, 731
Csp6I GTAC 1 cut(s) 573
CviAII CATG 7 cut(s) 222, 268, 431, 567, 623, 1260, 1284
CviQI GTAC 1 cut(s) 573
DdeI CTNAG 5 cut(s) 135, 226, 362, 465, 610
DpnI GATC 8 cut(s) 99, 327, 485, 534, 954, 981, 1066, 1221
DpnII GATC 8 cut(s) 97, 325, 483, 532, 952, 979, 1064, 1219
DrdI GACNNNNNNGTC 1 cut(s) 55
DseDI GACNNNNNNGTC 1 cut(s) 55
EaeI YGGCCR 1 cut(s) 1035
Eam1104I CTCTTC 2 cut(s) 567, 952
EarI CTCTTC 2 cut(s) 567, 952
Eco130I CCWWGG 2 cut(s) 566, 983
Eco31I GGTCTC 1 cut(s) 1258
Eco47I GGWCC 1 cut(s) 315
Eco57I CTGAAG 4 cut(s) 423, 720, 933, 1169
EcoRI GAATTC 2 cut(s) 215, 1139
EcoRII CCWGG 1 cut(s) 591
EcoT14I CCWWGG 2 cut(s) 566, 983
ErhI CCWWGG 2 cut(s) 566, 983
Esp3I CGTCTC 1 cut(s) 760
FaeI CATG 7 cut(s) 225, 271, 434, 570, 626, 1263, 1287
FatI CATG 7 cut(s) 221, 267, 430, 566, 622, 1259, 1283
FblI GTMKAC 1 cut(s) 59
Fnu4HI GCNGC 8 cut(s) 183, 194, 240, 491, 600, 789, 1014, 1029
FokI GGATG 7 cut(s) 148, 296, 482, 608, 643, 695, 1222
Fsp4HI GCNGC 8 cut(s) 183, 194, 240, 491, 600, 789, 1014, 1029
FspBI CTAG 3 cut(s) 723, 1025, 1062
GluI GCNGC 8 cut(s) 183, 194, 240, 491, 600, 789, 1014, 1029
HaeIII GGCC 4 cut(s) 384, 733, 937, 1037
HapII CCGG 3 cut(s) 313, 810, 1042
Hin1II CATG 7 cut(s) 225, 271, 434, 570, 626, 1263, 1287
HindIII AAGCTT 1 cut(s) 1271
HinfI GANTC 3 cut(s) 125, 1160, 1184
HpaII CCGG 3 cut(s) 313, 810, 1042
HphI GGTGA 2 cut(s) 409, 943
Hpy166II GTNNAC 4 cut(s) 60, 889, 1159, 1279
Hpy188III TCNNGA 3 cut(s) 101, 313, 794
Hpy8I GTNNAC 4 cut(s) 60, 889, 1159, 1279
HpyAV CCTTC 5 cut(s) 620, 744, 986, 1144, 1200
HpyCH4III ACNGT 3 cut(s) 450, 461, 778
HpyCH4IV ACGT 1 cut(s) 753
HpyCH4V TGCA 4 cut(s) 182, 434, 529, 788
HpyF10VI GCNNNNNNNGC 3 cut(s) 167, 596, 1034
HpyF3I CTNAG 5 cut(s) 135, 226, 362, 465, 610
HpySE526I ACGT 1 cut(s) 753
Hsp92II CATG 7 cut(s) 225, 271, 434, 570, 626, 1263, 1287
Kpn2I TCCGGA 1 cut(s) 312
Kzo9I GATC 8 cut(s) 97, 325, 483, 532, 952, 979, 1064, 1219
LguI GCTCTTC 1 cut(s) 567
LmnI GCTCC 3 cut(s) 498, 796, 840
Lsp1109I GCAGC 7 cut(s) 194, 205, 251, 586, 800, 1000, 1040
LweI GCATC 2 cut(s) 170, 586
MaeI CTAG 3 cut(s) 723, 1025, 1062
MaeII ACGT 1 cut(s) 753
MaeIII GTNAC 2 cut(s) 101, 397
MalI GATC 8 cut(s) 99, 327, 485, 534, 954, 981, 1066, 1221
MboI GATC 8 cut(s) 97, 325, 483, 532, 952, 979, 1064, 1219
MboII GAAGA 5 cut(s) 43, 335, 554, 657, 939
MflI RGATCY 5 cut(s) 325, 483, 952, 979, 1219
MlsI TGGCCA 1 cut(s) 1037
MluCI AATT 9 cut(s) 130, 149, 215, 250, 635, 849, 1107, 1139, 1249
MluNI TGGCCA 1 cut(s) 1037
MlyI GAGTC 3 cut(s) 134, 1154, 1193
MmeI TCCRAC 1 cut(s) 751
Mox20I TGGCCA 1 cut(s) 1037
MroI TCCGGA 1 cut(s) 312
MroXI GAANNNNTTC 1 cut(s) 801
MscI TGGCCA 1 cut(s) 1037
MseI TTAA 4 cut(s) 233, 354, 1202, 1247
Msp20I TGGCCA 1 cut(s) 1037
MspA1I CMGCKG 2 cut(s) 490, 1031
MspI CCGG 3 cut(s) 313, 810, 1042
MspR9I CCNGG 1 cut(s) 593
Mva1269I GAATGC 2 cut(s) 145, 700
MvaI CCWGG 1 cut(s) 593
MwoI GCNNNNNNNGC 3 cut(s) 167, 596, 1034
NcoI CCATGG 1 cut(s) 566
NdeII GATC 8 cut(s) 97, 325, 483, 532, 952, 979, 1064, 1219
NlaIII CATG 7 cut(s) 225, 271, 434, 570, 626, 1263, 1287
NlaIV GGNNCC 5 cut(s) 121, 485, 494, 981, 1221
NmuCI GTSAC 2 cut(s) 101, 397
NspI RCATGY 3 cut(s) 225, 434, 1287
PciI ACATGT 1 cut(s) 1283
PciSI GCTCTTC 1 cut(s) 567
PctI GAATGC 2 cut(s) 145, 700
PdmI GAANNNNTTC 1 cut(s) 801
PflMI CCANNNNNTGG 1 cut(s) 1229
PkrI GCNGC 8 cut(s) 184, 195, 241, 492, 601, 790, 1015, 1030
PleI GAGTC 3 cut(s) 133, 1154, 1192
PpsI GAGTC 3 cut(s) 133, 1154, 1192
PscI ACATGT 1 cut(s) 1283
Psp6I CCWGG 1 cut(s) 591
PspGI CCWGG 1 cut(s) 591
PspN4I GGNNCC 5 cut(s) 121, 485, 494, 981, 1221
PspPI GGNCC 3 cut(s) 315, 382, 731
PstNI CAGNNNCTG 1 cut(s) 794
PsuI RGATCY 5 cut(s) 325, 483, 952, 979, 1219
PvuII CAGCTG 1 cut(s) 1031
RsaI GTAC 1 cut(s) 574
RsaNI GTAC 1 cut(s) 573
SapI GCTCTTC 1 cut(s) 567
SaqAI TTAA 4 cut(s) 233, 354, 1202, 1247
SatI GCNGC 8 cut(s) 183, 194, 240, 491, 600, 789, 1014, 1029
Sau3AI GATC 8 cut(s) 97, 325, 483, 532, 952, 979, 1064, 1219
Sau96I GGNCC 3 cut(s) 315, 382, 731
SchI GAGTC 3 cut(s) 134, 1154, 1193
ScrFI CCNGG 1 cut(s) 593
SfaNI GCATC 2 cut(s) 170, 586
SinI GGWCC 1 cut(s) 315
SmlI CTYRAG 1 cut(s) 1007
SmoI CTYRAG 1 cut(s) 1007
Sse9I AATT 9 cut(s) 130, 149, 215, 250, 635, 849, 1107, 1139, 1249
SsiI CCGC 2 cut(s) 490, 764
SspI AATATT 1 cut(s) 1175
SspMI CTAG 3 cut(s) 723, 1025, 1062
StyD4I CCNGG 1 cut(s) 591
StyI CCWWGG 2 cut(s) 566, 983
TaaI ACNGT 3 cut(s) 450, 461, 778
TaiI ACGT 1 cut(s) 756
TaqI TCGA 1 cut(s) 542
TasI AATT 9 cut(s) 130, 149, 215, 250, 635, 849, 1107, 1139, 1249
TauI GCSGC 1 cut(s) 493
Tru1I TTAA 4 cut(s) 233, 354, 1202, 1247
Tru9I TTAA 4 cut(s) 233, 354, 1202, 1247
TseFI GTSAC 2 cut(s) 101, 397
TseI GCWGC 7 cut(s) 182, 193, 239, 599, 788, 1013, 1028
Tsp45I GTSAC 2 cut(s) 101, 397
TspDTI ATGAA 9 cut(s) 17, 54, 489, 519, 596, 639, 699, 876, 1185
TspGWI ACGGA 1 cut(s) 1136
Van91I CCANNNNNTGG 1 cut(s) 1229
VpaK11BI GGWCC 1 cut(s) 315
XapI RAATTY 6 cut(s) 149, 215, 250, 635, 849, 1139
XceI RCATGY 3 cut(s) 225, 434, 1287
XcmI CCANNNNNNNNNTGG 1 cut(s) 1045
XmiI GTMKAC 1 cut(s) 59
XmnI GAANNNNTTC 1 cut(s) 801
XspI CTAG 3 cut(s) 723, 1025, 1062
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.