pycom07g16590

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0014957
Physical Location & Seq
Reverse (-)
18989171 .. 18991235
2065 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g16590.2

Sequence Viewer

Length: 1299 bp
ATGAAGTGTTTTTATAAATTCTCCAACAGAGATAAGGATGATGAACCAAAGACTACTAAGTCTATCTCTACTCGTTCAGCTTCCTCATTCTTTTCACGAGATCGTGACCCAAGAAAATCAAGTTCTGAGTTCAATTCCCAGAATACCACTGCAGAACTTAGCACACCATCGTCCACTAAGTCATTTGCAGCATTGTCTCAGAGACAGAGTAATAATCTCAGAGAATTCACATGCTCGGAGTTAAAAGCAGCAACAAAGAACTTTAGTCTCTCCCTCATGCTTGGAGAGGGTGGGTTCGGTGGTGTGTATAGGGGTAATATCCGGAGTGCAGAAGATCAACATAAAAGAATAGATGTCGCTGTTAAACAACTGAGTAAACGGGGTTTTCAGGGCCATAAAGAGTGGGTGACTGAAGTCAATGTTTTAGGGGTTGTTGTACATCCAAATCTTGTCAAGCTGTTAGGCTACTGTGCTGAGGATGACGAAAGAGGGATTCAACGGCTCCTGGTTTACGAATATATGCCCAACAGAAGTGTGCAAGACCACTTATCAAGCCGATTTCAGATAGCTCTTCCATGGGGCGCAAGAATGAAAATAGCCCAGGATGCTGCCCGTGGCTTAGCATATCTCCATGAGGGGATGGAATTTCAGATTATCTTTAGGGATTTCAAGTCTTCAAACATACTTTTGGATGAACAATGGAATGCCAAGTTATCGGACTTTGGATTGGCCAGACTTGGGCCTTCAGACGGATTGAGTCACGTCTCTACTGCGGTTGTTGGAACAGTTGGATATGCAGCTCCTGAATACATTCAAACTGGGCATCTCACAACAAAAAGTGATGTGTGGAGTTACGGAGTTTTCCTTTTAGAACTCATCACAGGCAGACGACCTCTGGATAGAAACCGACCCAAGAACGAGCAAAAACTCTTGGAATGGGTGAGGCCACACCTCTCTTCAGACCTAAAAAAGTTCCAGCTGATTTTGGATGCAAGGCTCGAAGGAAAGTATTCCCTCAAGGCAGCCCAAAAACTAGCAGCTGTAGCCAGCCGGTGCTTGGTGCGACAGCCTAGATCGCGCCCCAAAATGAGTGAAGTCTTGGAGATGTTGAACCGAATCATGGAGACAACGGACATGGGAAGCCCGGAACTCCCTCTGCAGGGTGTGGACTCCAAAGAAGACTATTTTGCGGAATCCAAAAGAGAGTATTTGATGAGGAGGTTTGTGGATCCATTCATCGGAGAGAACGGTTGCTTAAATTGGCCAATATGGAGACCAAAGATTGTAAATCCATGTTGA

Protein Analysis

433

Amino Acids

49.06

Weight (kDa)

9.31

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014957)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39110 AT2G39110
fragaria_vesca FvH4_7g18950
malus_domestica MD01G1105200.v1.1
prunus_persica Prupe.2G210500_v2.0.a1 Prupe.2G210500_v2.0.a1
pyrus_communis pycom01g13170 pycom07g16590
rosa_chinensis RchiOBHm_Chr1g0362881
rosa_laevigata RLG00000027615
rosa_multiflora Rmu_sc0001502.1_g000012
rosa_roxburghii Rroxscaffold_4G00293680
rosa_rugosa Rorug01G0302100 Rorug01G0302100
rosa_samantha Rh1BG274200
rosa_wichuraiana Rw1G027580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 15
AasI GACNNNNNNGTC 1 cut(s) 58
AccII CGCG 1 cut(s) 1078
AccIII TCCGGA 1 cut(s) 321
AciI CCGC 2 cut(s) 773, 1190
AclWI GGATC 2 cut(s) 1223, 1236
AcoI YGGCCR 2 cut(s) 729, 1262
AcsI RAATTY 3 cut(s) 17, 224, 644
AcuI CTGAAG 3 cut(s) 432, 729, 942
AfaI GTAC 1 cut(s) 438
AfiI CCNNNNNNNGG 7 cut(s) 738, 749, 1057, 1120, 1159, 1160, 1238
AgsI TTSAA 6 cut(s) 133, 497, 670, 678, 815, 1111
AjiI CACGTC 1 cut(s) 763
AjnI CCWGG 2 cut(s) 504, 600
AluBI AGCT 6 cut(s) 80, 457, 569, 800, 979, 1040
AluI AGCT 6 cut(s) 80, 457, 569, 800, 979, 1040
Alw26I GTCTC 6 cut(s) 196, 201, 272, 769, 1118, 1267
AlwI GGATC 2 cut(s) 1223, 1236
AlwNI CAGNNNCTG 1 cut(s) 803
Aor13HI TCCGGA 1 cut(s) 321
AoxI GGCC 5 cut(s) 391, 729, 740, 944, 1262
ApeKI GCWGC 6 cut(s) 188, 248, 608, 797, 1022, 1037
ApoI RAATTY 3 cut(s) 17, 224, 644
Asp700I GAANNNNTTC 2 cut(s) 810, 1009
AspLEI GCGC 2 cut(s) 584, 1080
AspS9I GGNCC 2 cut(s) 391, 740
AsuC2I CCSGG 1 cut(s) 1145
AsuHPI GGTGA 2 cut(s) 418, 952
BalI TGGCCA 2 cut(s) 731, 1264
BamHI GGATCC 1 cut(s) 1228
BauI CACGAG 1 cut(s) 96
BbsI GAAGAC 2 cut(s) 666, 1185
BbvCI CCTCAGC 1 cut(s) 474
BbvI GCAGC 6 cut(s) 200, 260, 595, 809, 1034, 1049
BccI CCATC 2 cut(s) 175, 634
BceAI ACGGC 1 cut(s) 515
BciT130I CCWGG 2 cut(s) 506, 602
BcnI CCSGG 1 cut(s) 1145
BcoDI GTCTC 6 cut(s) 196, 201, 272, 769, 1118, 1267
BfaI CTAG 2 cut(s) 1034, 1071
BfmI CTRYAG 3 cut(s) 150, 1041, 1157
BisI GCNGC 6 cut(s) 189, 249, 609, 798, 1023, 1038
BlpI GCTNAGC 1 cut(s) 619
BlsI GCNGC 6 cut(s) 190, 250, 610, 799, 1024, 1039
Bme1390I CCNGG 3 cut(s) 506, 602, 1145
BmgBI CACGTC 1 cut(s) 763
BmgT120I GGNCC 2 cut(s) 391, 740
BmiI GGNNCC 2 cut(s) 503, 1230
BmrFI CCNGG 3 cut(s) 506, 602, 1145
BmrI ACTGGG 1 cut(s) 828
BmsI GCATC 3 cut(s) 595, 832, 979
BmuI ACTGGG 1 cut(s) 828
BoxI GACNNNNGTC 1 cut(s) 413
BpiI GAAGAC 2 cut(s) 666, 1185
Bpu10I CCTNAGC 1 cut(s) 474
Bpu1102I GCTNAGC 1 cut(s) 619
BpuEI CTTGAG 1 cut(s) 1001
BpuMI CCSGG 1 cut(s) 1145
BsaI GGTCTC 1 cut(s) 1267
BsaJI CCNNGG 3 cut(s) 575, 600, 613
BsaWI WCCGGW 1 cut(s) 321
Bsc4I CCNNNNNNNGG 7 cut(s) 738, 749, 1057, 1120, 1159, 1160, 1238
Bse118I RCCGGY 1 cut(s) 1050
Bse1I ACTGG 1 cut(s) 823
BseAI TCCGGA 1 cut(s) 321
BseBI CCWGG 2 cut(s) 506, 602
BseDI CCNNGG 3 cut(s) 575, 600, 613
BseGI GGATG 7 cut(s) 43, 439, 484, 610, 645, 697, 994
BseLI CCNNNNNNNGG 7 cut(s) 738, 749, 1057, 1120, 1159, 1160, 1238
BseMII CTCAG 5 cut(s) 117, 212, 232, 362, 465
BseNI ACTGG 1 cut(s) 823
BseRI GAGGAG 1 cut(s) 1231
BseXI GCAGC 6 cut(s) 200, 260, 595, 809, 1034, 1049
BsgI GTGCAG 1 cut(s) 348
Bsh1236I CGCG 1 cut(s) 1078
BshFI GGCC 5 cut(s) 393, 731, 742, 946, 1264
BsiSI CCGG 3 cut(s) 322, 1051, 1145
BslI CCNNNNNNNGG 7 cut(s) 738, 749, 1057, 1120, 1159, 1160, 1238
BsmAI GTCTC 6 cut(s) 196, 201, 272, 769, 1118, 1267
BsmBI CGTCTC 1 cut(s) 769
BsmI GAATGC 1 cut(s) 709
BsnI GGCC 5 cut(s) 393, 731, 742, 946, 1264
Bso31I GGTCTC 1 cut(s) 1267
Bsp13I TCCGGA 1 cut(s) 321
Bsp1407I TGTACA 1 cut(s) 436
Bsp143I GATC 4 cut(s) 100, 334, 1073, 1228
Bsp1720I GCTNAGC 1 cut(s) 619
Bsp19I CCATGG 1 cut(s) 575
BspACI CCGC 2 cut(s) 773, 1190
BspANI GGCC 5 cut(s) 393, 731, 742, 946, 1264
BspCNI CTCAG 5 cut(s) 118, 211, 231, 363, 466
BspEI TCCGGA 1 cut(s) 321
BspFNI CGCG 1 cut(s) 1078
BspLI GGNNCC 2 cut(s) 503, 1230
BspMAI CTGCAG 2 cut(s) 154, 1161
BspPI GGATC 2 cut(s) 1223, 1236
BspQI GCTCTTC 1 cut(s) 576
BspTNI GGTCTC 1 cut(s) 1267
BsrFI RCCGGY 1 cut(s) 1050
BsrGI TGTACA 1 cut(s) 436
BsrI ACTGG 1 cut(s) 823
BssAI RCCGGY 1 cut(s) 1050
BssECI CCNNGG 3 cut(s) 575, 600, 613
BssMI GATC 4 cut(s) 100, 334, 1073, 1228
BssSI CACGAG 1 cut(s) 96
BssT1I CCWWGG 1 cut(s) 575
Bst2BI CACGAG 1 cut(s) 96
Bst2UI CCWGG 2 cut(s) 506, 602
Bst4CI ACNGT 3 cut(s) 470, 787, 1250
Bst6I CTCTTC 2 cut(s) 576, 961
BstAUI TGTACA 1 cut(s) 436
BstC8I GCNNGC 1 cut(s) 1048
BstDEI CTNAG 9 cut(s) 57, 126, 158, 177, 198, 218, 371, 474, 619
BstDSI CCRYGG 2 cut(s) 575, 613
BstF5I GGATG 7 cut(s) 43, 439, 484, 610, 645, 697, 994
BstFNI CGCG 1 cut(s) 1078
BstHHI GCGC 2 cut(s) 584, 1080
BstKTI GATC 4 cut(s) 103, 337, 1076, 1231
BstMAI GTCTC 6 cut(s) 196, 201, 272, 769, 1118, 1267
BstMBI GATC 4 cut(s) 100, 334, 1073, 1228
BstMWI GCNNNNNNNGC 3 cut(s) 605, 1043, 1075
BstNI CCWGG 2 cut(s) 506, 602
BstNSI RCATGY 1 cut(s) 234
BstPAI GACNNNNGTC 1 cut(s) 413
BstSCI CCNGG 3 cut(s) 504, 600, 1143
BstSFI CTRYAG 3 cut(s) 150, 1041, 1157
BstUI CGCG 1 cut(s) 1078
BstV1I GCAGC 6 cut(s) 200, 260, 595, 809, 1034, 1049
BstV2I GAAGAC 2 cut(s) 666, 1185
BstX2I RGATCY 1 cut(s) 1228
BstYI RGATCY 1 cut(s) 1228
BsuRI GGCC 5 cut(s) 393, 731, 742, 946, 1264
BtgI CCRYGG 2 cut(s) 575, 613
BtrI CACGTC 1 cut(s) 763
BtsCI GGATG 7 cut(s) 43, 439, 484, 610, 645, 697, 994
BtsI GCAGTG 1 cut(s) 147
BtsIMutI CAGTG 1 cut(s) 147
Cac8I GCNNGC 1 cut(s) 1048
CaiI CAGNNNCTG 1 cut(s) 803
CfoI GCGC 2 cut(s) 584, 1080
Cfr10I RCCGGY 1 cut(s) 1050
Cfr13I GGNCC 2 cut(s) 391, 740
Csp6I GTAC 1 cut(s) 437
CviAII CATG 7 cut(s) 231, 277, 576, 632, 1120, 1135, 1293
CviQI GTAC 1 cut(s) 437
DdeI CTNAG 9 cut(s) 57, 126, 158, 177, 198, 218, 371, 474, 619
DpnI GATC 4 cut(s) 102, 336, 1075, 1230
DpnII GATC 4 cut(s) 100, 334, 1073, 1228
DrdI GACNNNNNNGTC 1 cut(s) 58
DseDI GACNNNNNNGTC 1 cut(s) 58
EaeI YGGCCR 2 cut(s) 729, 1262
Eam1104I CTCTTC 2 cut(s) 576, 961
EarI CTCTTC 2 cut(s) 576, 961
Eco130I CCWWGG 1 cut(s) 575
Eco31I GGTCTC 1 cut(s) 1267
Eco57I CTGAAG 3 cut(s) 432, 729, 942
EcoRI GAATTC 1 cut(s) 224
EcoRII CCWGG 2 cut(s) 504, 600
EcoT14I CCWWGG 1 cut(s) 575
ErhI CCWWGG 1 cut(s) 575
Esp3I CGTCTC 1 cut(s) 769
FaeI CATG 7 cut(s) 234, 280, 579, 635, 1123, 1138, 1296
FatI CATG 7 cut(s) 230, 276, 575, 631, 1119, 1134, 1292
Fnu4HI GCNGC 6 cut(s) 189, 249, 609, 798, 1023, 1038
FokI GGATG 7 cut(s) 50, 426, 491, 617, 652, 704, 1001
Fsp4HI GCNGC 6 cut(s) 189, 249, 609, 798, 1023, 1038
FspBI CTAG 2 cut(s) 1034, 1071
GlaI GCGC 2 cut(s) 583, 1079
GluI GCNGC 6 cut(s) 189, 249, 609, 798, 1023, 1038
HaeIII GGCC 5 cut(s) 393, 731, 742, 946, 1264
HapII CCGG 3 cut(s) 322, 1051, 1145
HhaI GCGC 2 cut(s) 584, 1080
Hin1II CATG 7 cut(s) 234, 280, 579, 635, 1123, 1138, 1296
Hin6I GCGC 2 cut(s) 582, 1078
HinP1I GCGC 2 cut(s) 582, 1078
HinfI GANTC 5 cut(s) 493, 757, 1116, 1169, 1193
HpaII CCGG 3 cut(s) 322, 1051, 1145
HphI GGTGA 2 cut(s) 418, 952
Hpy166II GTNNAC 4 cut(s) 174, 377, 511, 1168
Hpy188III TCNNGA 5 cut(s) 96, 104, 322, 803, 896
Hpy8I GTNNAC 4 cut(s) 174, 377, 511, 1168
HpyAV CCTTC 2 cut(s) 753, 995
HpyCH4III ACNGT 3 cut(s) 470, 787, 1250
HpyCH4IV ACGT 1 cut(s) 762
HpyCH4V TGCA 7 cut(s) 152, 188, 329, 538, 797, 992, 1159
HpyF10VI GCNNNNNNNGC 3 cut(s) 605, 1043, 1075
HpyF3I CTNAG 9 cut(s) 57, 126, 158, 177, 198, 218, 371, 474, 619
HpySE526I ACGT 1 cut(s) 762
Hsp92II CATG 7 cut(s) 234, 280, 579, 635, 1123, 1138, 1296
HspAI GCGC 2 cut(s) 582, 1078
Kpn2I TCCGGA 1 cut(s) 321
Kzo9I GATC 4 cut(s) 100, 334, 1073, 1228
LguI GCTCTTC 1 cut(s) 576
LmnI GCTCC 2 cut(s) 507, 805
Lsp1109I GCAGC 6 cut(s) 200, 260, 595, 809, 1034, 1049
LweI GCATC 3 cut(s) 595, 832, 979
MaeI CTAG 2 cut(s) 1034, 1071
MaeII ACGT 1 cut(s) 762
MaeIII GTNAC 4 cut(s) 104, 406, 758, 851
MalI GATC 4 cut(s) 102, 336, 1075, 1230
MboI GATC 4 cut(s) 100, 334, 1073, 1228
MboII GAAGA 5 cut(s) 344, 563, 666, 948, 1190
MflI RGATCY 1 cut(s) 1228
MlsI TGGCCA 2 cut(s) 731, 1264
MluCI AATT 5 cut(s) 17, 133, 224, 644, 1258
MluNI TGGCCA 2 cut(s) 731, 1264
MlyI GAGTC 2 cut(s) 766, 1163
MmeI TCCRAC 3 cut(s) 48, 760, 769
Mox20I TGGCCA 2 cut(s) 731, 1264
MroI TCCGGA 1 cut(s) 321
MroXI GAANNNNTTC 2 cut(s) 810, 1009
MscI TGGCCA 2 cut(s) 731, 1264
MseI TTAA 3 cut(s) 242, 363, 1256
Msp20I TGGCCA 2 cut(s) 731, 1264
MspA1I CMGCKG 2 cut(s) 979, 1040
MspI CCGG 3 cut(s) 322, 1051, 1145
MspR9I CCNGG 3 cut(s) 506, 602, 1145
Mva1269I GAATGC 1 cut(s) 709
MvaI CCWGG 2 cut(s) 506, 602
MvnI CGCG 1 cut(s) 1078
MwoI GCNNNNNNNGC 3 cut(s) 605, 1043, 1075
NciI CCSGG 1 cut(s) 1145
NcoI CCATGG 1 cut(s) 575
NdeII GATC 4 cut(s) 100, 334, 1073, 1228
NlaIII CATG 7 cut(s) 234, 280, 579, 635, 1123, 1138, 1296
NlaIV GGNNCC 2 cut(s) 503, 1230
NmuCI GTSAC 3 cut(s) 104, 406, 758
NspI RCATGY 1 cut(s) 234
PciSI GCTCTTC 1 cut(s) 576
PctI GAATGC 1 cut(s) 709
PdmI GAANNNNTTC 2 cut(s) 810, 1009
PfeI GAWTC 3 cut(s) 493, 1116, 1193
PkrI GCNGC 6 cut(s) 190, 250, 610, 799, 1024, 1039
PleI GAGTC 2 cut(s) 765, 1163
PpsI GAGTC 2 cut(s) 765, 1163
PshAI GACNNNNGTC 1 cut(s) 413
PsiI TTATAA 1 cut(s) 15
Psp6I CCWGG 2 cut(s) 504, 600
PspGI CCWGG 2 cut(s) 504, 600
PspN4I GGNNCC 2 cut(s) 503, 1230
PspPI GGNCC 2 cut(s) 391, 740
PstI CTGCAG 2 cut(s) 154, 1161
PstNI CAGNNNCTG 1 cut(s) 803
PsuI RGATCY 1 cut(s) 1228
PvuII CAGCTG 2 cut(s) 979, 1040
RsaI GTAC 1 cut(s) 438
RsaNI GTAC 1 cut(s) 437
SapI GCTCTTC 1 cut(s) 576
SaqAI TTAA 3 cut(s) 242, 363, 1256
SatI GCNGC 6 cut(s) 189, 249, 609, 798, 1023, 1038
Sau3AI GATC 4 cut(s) 100, 334, 1073, 1228
Sau96I GGNCC 2 cut(s) 391, 740
SchI GAGTC 2 cut(s) 766, 1163
ScrFI CCNGG 3 cut(s) 506, 602, 1145
SfaNI GCATC 3 cut(s) 595, 832, 979
SfcI CTRYAG 3 cut(s) 150, 1041, 1157
SmlI CTYRAG 1 cut(s) 1016
SmoI CTYRAG 1 cut(s) 1016
Sse9I AATT 5 cut(s) 17, 133, 224, 644, 1258
SsiI CCGC 2 cut(s) 773, 1190
SspMI CTAG 2 cut(s) 1034, 1071
StyD4I CCNGG 3 cut(s) 504, 600, 1143
StyI CCWWGG 1 cut(s) 575
TaaI ACNGT 3 cut(s) 470, 787, 1250
TaiI ACGT 1 cut(s) 765
TaqI TCGA 1 cut(s) 999
TasI AATT 5 cut(s) 17, 133, 224, 644, 1258
TatI WGTACW 1 cut(s) 436
TfiI GAWTC 3 cut(s) 493, 1116, 1193
Tru1I TTAA 3 cut(s) 242, 363, 1256
Tru9I TTAA 3 cut(s) 242, 363, 1256
TscAI CASTG 1 cut(s) 154
TseFI GTSAC 3 cut(s) 104, 406, 758
TseI GCWGC 6 cut(s) 188, 248, 608, 797, 1022, 1037
Tsp45I GTSAC 3 cut(s) 104, 406, 758
TspDTI ATGAA 5 cut(s) 17, 57, 605, 708, 1225
TspGWI ACGGA 3 cut(s) 765, 870, 1145
TspRI CASTG 1 cut(s) 154
XapI RAATTY 3 cut(s) 17, 224, 644
XceI RCATGY 1 cut(s) 234
XcmI CCANNNNNNNNNTGG 1 cut(s) 1054
XmnI GAANNNNTTC 2 cut(s) 810, 1009
XspI CTAG 2 cut(s) 1034, 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.