Prupe.2G213200_v2.0.a1

Acetyltransferase (GNAT) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0009315
Physical Location & Seq
Reverse (-)
24495426 .. 24498306
2881 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G213200.1

Sequence Viewer

Length: 888 bp
ATGCGGACCATACCGTTGGGAATATCAGTATCCCCATCCTCCATAAACAGCTCCTCCAAAACCACCTTTCTCAACAGTCTCAACCTCAAGAGACCAAACCCACTTCCTCTTACTTCTACTTCTACTTCTTCTAGGGTTCCTGCCTCCACCTCCACCTCCACTGAGGATGATGATTTCTCTTTTCTTTCCTTCTCCAAATCTGGAGTATGCAGAGCCAGTCAAGTGGCTGATTTATTTCCAACAGTGTCTCCCGAGATTGTTGTCCGGGAGGCCAGGTTAGAGGACTGTTGGGAGGTGGCTGAGACTCACTGCAGCTCTTTCTTCCCTGAATATTCTTTTCCTTTAGATTTTGTTCTGCGGATTGACCGGCTGGTAGCGATGCTAGCCGGATTTTCTTTGCCAAATGGTTGCAAAAGGACTTGTCTCGTTGCTGTCATTGGCAACTCTATTGATGAGACTTTTCTCTTTGGAAGTGAAGATTTCAAGATTGGTGGTTTTGATGGGAAGTTCAGTCTCAATAGGAGGTATGTGGCTGGGATATTGACAGTGGATACTGTTGCTGATTTTCTTCCTAGAAAAGGACCTCTCCGGCAAAGAAGGACTGGAGTTGCATACGTATCAAATGTTGCTGTCCGGGAGAGATTTCGACGAAGAGGTATAGCTAAGAGGCTAATAGCAAAGGCAGAAGCTCAAGCCAGGAGCTGGGATTGCCGTGCCATTGCGTTGCACTGTGACTTAAACAATCCTGGGGCTATAAAGCTGTACAAAGGCCAGGGTTTCAGAAGCATTAAGGTGCCTGAAGGAGCAAACTGGCCCCAGCCGAAGACCGCTCCGGATGTTAGGTTCAACTTCATGATGAAGCTTCTCAACACCAAGGCTGCTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

296

Amino Acids

32.57

Weight (kDa)

9.68

Isoelectric Point (pI)

40.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39000 AT2G39000 AT2G39000 AT2G39000
fragaria_vesca FvH4_7g19440 FvH4_7g19440 FvH4_7g19440
malus_domestica MD01G1108300.v1.1 MD07G1174400.v1.1
prunus_persica Prupe.2G213200_v2.0.a1
pyrus_communis pycom01g13520 pycom07g16860
rosa_chinensis RchiOBHm_Chr1g0363321
rosa_laevigata RLG00000027574
rosa_multiflora Rmu_sc0011095.1_g000002
rosa_roxburghii Rroxscaffold_4G00293280
rosa_rugosa Rorug01G0306300
rosa_samantha Rh1AG315100 Rh1BG278300 Rh1CG294800 Rh1DG309400
rosa_wichuraiana Rw1G027920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 793
AccB7I CCANNNNNTGG 1 cut(s) 702
AccBSI CCGCTC 1 cut(s) 830
AccIII TCCGGA 1 cut(s) 832
AciI CCGC 3 cut(s) 4, 358, 828
AcuI CTGAAG 1 cut(s) 819
AfaI GTAC 1 cut(s) 764
AfiI CCNNNNNNNGG 2 cut(s) 578, 702
AgsI TTSAA 2 cut(s) 484, 847
AjnI CCWGG 4 cut(s) 272, 695, 745, 771
AloI GAACNNNNNNTCC 2 cut(s) 827, 859
AluBI AGCT 7 cut(s) 51, 315, 662, 689, 702, 760, 862
AluI AGCT 7 cut(s) 51, 315, 662, 689, 702, 760, 862
Alw26I GTCTC 7 cut(s) 83, 85, 252, 296, 428, 449, 518
AlwNI CAGNNNCTG 1 cut(s) 702
Ama87I CYCGRG 1 cut(s) 251
Aor13HI TCCGGA 1 cut(s) 832
AoxI GGCC 3 cut(s) 270, 769, 812
ApeKI GCWGC 2 cut(s) 312, 878
AspS9I GGNCC 3 cut(s) 6, 581, 813
AsuC2I CCSGG 2 cut(s) 266, 635
AsuNHI GCTAGC 1 cut(s) 382
AvaI CYCGRG 1 cut(s) 251
AvaII GGWCC 2 cut(s) 6, 581
BanI GGYRCC 1 cut(s) 793
BbsI GAAGAC 1 cut(s) 830
BbvI GCAGC 2 cut(s) 324, 865
BccI CCATC 2 cut(s) 43, 494
BceAI ACGGC 1 cut(s) 696
BciT130I CCWGG 4 cut(s) 274, 697, 747, 773
BciVI GTATCC 2 cut(s) 40, 544
BcnI CCSGG 2 cut(s) 266, 635
BcoDI GTCTC 7 cut(s) 83, 85, 252, 296, 428, 449, 518
BfaI CTAG 3 cut(s) 132, 383, 573
BfmI CTRYAG 1 cut(s) 310
BfuI GTATCC 2 cut(s) 40, 544
BisI GCNGC 2 cut(s) 313, 879
BlsI GCNGC 2 cut(s) 314, 880
Bme1390I CCNGG 6 cut(s) 266, 274, 635, 697, 747, 773
Bme18I GGWCC 2 cut(s) 6, 581
BmeT110I CYCGRG 1 cut(s) 251
BmgT120I GGNCC 3 cut(s) 6, 581, 813
BmiI GGNNCC 3 cut(s) 138, 795, 815
BmrFI CCNGG 6 cut(s) 266, 274, 635, 697, 747, 773
BmsI GCATC 1 cut(s) 369
BmtI GCTAGC 1 cut(s) 386
BpiI GAAGAC 1 cut(s) 830
BpmI CTGGAG 2 cut(s) 222, 624
BpuEI CTTGAG 2 cut(s) 71, 675
BpuMI CCSGG 2 cut(s) 266, 635
BsaAI YACGTR 1 cut(s) 616
BsaI GGTCTC 1 cut(s) 85
BsaJI CCNNGG 3 cut(s) 746, 772, 873
BsaWI WCCGGW 1 cut(s) 832
BsaXI ACNNNNNCTCC 6 cut(s) 38, 68, 232, 260, 262, 290
Bsc4I CCNNNNNNNGG 2 cut(s) 578, 702
Bse118I RCCGGY 1 cut(s) 366
Bse1I ACTGG 3 cut(s) 216, 607, 815
Bse3DI GCAATG 1 cut(s) 717
BseAI TCCGGA 1 cut(s) 832
BseBI CCWGG 4 cut(s) 274, 697, 747, 773
BseDI CCNNGG 3 cut(s) 746, 772, 873
BseGI GGATG 3 cut(s) 35, 172, 841
BseLI CCNNNNNNNGG 2 cut(s) 578, 702
BseMI GCAATG 1 cut(s) 717
BseMII CTCAG 2 cut(s) 153, 291
BseNI ACTGG 3 cut(s) 216, 607, 815
BseRI GAGGAG 1 cut(s) 43
BseXI GCAGC 2 cut(s) 324, 865
BseYI CCCAGC 3 cut(s) 533, 702, 816
BshFI GGCC 3 cut(s) 272, 771, 814
BshNI GGYRCC 1 cut(s) 793
BsiHKCI CYCGRG 1 cut(s) 251
BsiSI CCGG 6 cut(s) 265, 367, 387, 589, 634, 833
BslI CCNNNNNNNGG 2 cut(s) 578, 702
BsmAI GTCTC 7 cut(s) 83, 85, 252, 296, 428, 449, 518
BsnI GGCC 3 cut(s) 272, 771, 814
Bso31I GGTCTC 1 cut(s) 85
BsoBI CYCGRG 1 cut(s) 251
Bsp13I TCCGGA 1 cut(s) 832
Bsp1407I TGTACA 1 cut(s) 762
BspACI CCGC 3 cut(s) 4, 358, 828
BspANI GGCC 3 cut(s) 272, 771, 814
BspCNI CTCAG 2 cut(s) 154, 292
BspEI TCCGGA 1 cut(s) 832
BspHI TCATGA 1 cut(s) 852
BspLI GGNNCC 3 cut(s) 138, 795, 815
BspMAI CTGCAG 1 cut(s) 314
BspOI GCTAGC 1 cut(s) 386
BspT107I GGYRCC 1 cut(s) 793
BspTNI GGTCTC 1 cut(s) 85
BsrBI CCGCTC 1 cut(s) 830
BsrDI GCAATG 1 cut(s) 717
BsrFI RCCGGY 1 cut(s) 366
BsrGI TGTACA 1 cut(s) 762
BsrI ACTGG 3 cut(s) 216, 607, 815
BssAI RCCGGY 1 cut(s) 366
BssECI CCNNGG 3 cut(s) 746, 772, 873
BssT1I CCWWGG 1 cut(s) 873
Bst2UI CCWGG 4 cut(s) 274, 697, 747, 773
Bst4CI ACNGT 7 cut(s) 15, 77, 244, 287, 547, 556, 731
Bst6I CTCTTC 1 cut(s) 646
BstAUI TGTACA 1 cut(s) 762
BstBAI YACGTR 1 cut(s) 616
BstC8I GCNNGC 1 cut(s) 384
BstDEI CTNAG 4 cut(s) 162, 300, 663, 885
BstENI CCTNNNNNAGG 1 cut(s) 576
BstF5I GGATG 3 cut(s) 35, 172, 841
BstMAI GTCTC 7 cut(s) 83, 85, 252, 296, 428, 449, 518
BstMWI GCNNNNNNNGC 2 cut(s) 383, 708
BstNI CCWGG 4 cut(s) 274, 697, 747, 773
BstSCI CCNGG 6 cut(s) 264, 272, 633, 695, 745, 771
BstSFI CTRYAG 1 cut(s) 310
BstSNI TACGTA 1 cut(s) 616
BstV1I GCAGC 2 cut(s) 324, 865
BstV2I GAAGAC 1 cut(s) 830
BstXI CCANNNNNNTGG 2 cut(s) 16, 223
BsuI GTATCC 2 cut(s) 40, 544
BsuRI GGCC 3 cut(s) 272, 771, 814
BtgZI GCGATG 1 cut(s) 392
BtsCI GGATG 3 cut(s) 35, 172, 841
BtsI GCAGTG 1 cut(s) 307
BtsIMutI CAGTG 5 cut(s) 159, 249, 307, 552, 727
Cac8I GCNNGC 1 cut(s) 384
CaiI CAGNNNCTG 1 cut(s) 702
CciI TCATGA 1 cut(s) 852
Cfr10I RCCGGY 1 cut(s) 366
Cfr13I GGNCC 3 cut(s) 6, 581, 813
Csp6I GTAC 1 cut(s) 763
CspCI CAANNNNNGTGG 2 cut(s) 472, 507
CviAII CATG 1 cut(s) 853
CviQI GTAC 1 cut(s) 763
DdeI CTNAG 4 cut(s) 162, 300, 663, 885
Eam1104I CTCTTC 1 cut(s) 646
EarI CTCTTC 1 cut(s) 646
Eco105I TACGTA 1 cut(s) 616
Eco130I CCWWGG 1 cut(s) 873
Eco31I GGTCTC 1 cut(s) 85
Eco47I GGWCC 2 cut(s) 6, 581
Eco57I CTGAAG 1 cut(s) 819
Eco88I CYCGRG 1 cut(s) 251
EcoNI CCTNNNNNAGG 1 cut(s) 576
EcoO109I RGGNCCY 1 cut(s) 581
EcoRII CCWGG 4 cut(s) 272, 695, 745, 771
EcoT14I CCWWGG 1 cut(s) 873
ErhI CCWWGG 1 cut(s) 873
FaeI CATG 1 cut(s) 856
FaiI YATR 8 cut(s) 11, 44, 208, 528, 613, 659, 755, 854
FatI CATG 1 cut(s) 852
Fnu4HI GCNGC 2 cut(s) 313, 879
FokI GGATG 3 cut(s) 22, 179, 848
Fsp4HI GCNGC 2 cut(s) 313, 879
FspBI CTAG 3 cut(s) 132, 383, 573
GluI GCNGC 2 cut(s) 313, 879
GsaI CCCAGC 3 cut(s) 537, 706, 820
GsuI CTGGAG 2 cut(s) 222, 624
HaeIII GGCC 3 cut(s) 272, 771, 814
HapII CCGG 6 cut(s) 265, 367, 387, 589, 634, 833
Hin1II CATG 1 cut(s) 856
HindIII AAGCTT 1 cut(s) 860
HinfI GANTC 1 cut(s) 304
HpaII CCGG 6 cut(s) 265, 367, 387, 589, 634, 833
Hpy188I TCNGA 1 cut(s) 782
Hpy188III TCNNGA 6 cut(s) 88, 201, 251, 484, 833, 853
Hpy99I CGWCG 1 cut(s) 651
HpyAV CCTTC 3 cut(s) 199, 591, 794
HpyCH4III ACNGT 7 cut(s) 15, 77, 244, 287, 547, 556, 731
HpyCH4IV ACGT 1 cut(s) 615
HpyCH4V TGCA 5 cut(s) 210, 312, 411, 611, 727
HpyF10VI GCNNNNNNNGC 2 cut(s) 383, 708
HpyF3I CTNAG 4 cut(s) 162, 300, 663, 885
HpySE526I ACGT 1 cut(s) 615
Hsp92II CATG 1 cut(s) 856
Kpn2I TCCGGA 1 cut(s) 832
LmnI GCTCC 4 cut(s) 56, 699, 803, 835
Lsp1109I GCAGC 2 cut(s) 324, 865
LweI GCATC 1 cut(s) 369
MaeI CTAG 3 cut(s) 132, 383, 573
MaeII ACGT 1 cut(s) 615
MaeIII GTNAC 1 cut(s) 731
MbiI CCGCTC 1 cut(s) 830
MboII GAAGA 6 cut(s) 120, 313, 488, 560, 663, 835
MlyI GAGTC 1 cut(s) 298
MmeI TCCRAC 1 cut(s) 263
MroI TCCGGA 1 cut(s) 832
MseI TTAA 2 cut(s) 737, 789
MslI CAYNNNNRTG 1 cut(s) 791
MspI CCGG 6 cut(s) 265, 367, 387, 589, 634, 833
MspR9I CCNGG 6 cut(s) 266, 274, 635, 697, 747, 773
MvaI CCWGG 4 cut(s) 274, 697, 747, 773
MwoI GCNNNNNNNGC 2 cut(s) 383, 708
NciI CCSGG 2 cut(s) 266, 635
NheI GCTAGC 1 cut(s) 382
NlaIII CATG 1 cut(s) 856
NlaIV GGNNCC 3 cut(s) 138, 795, 815
NmuCI GTSAC 1 cut(s) 731
PagI TCATGA 1 cut(s) 852
PflMI CCANNNNNTGG 1 cut(s) 702
PfoI TCCNGGA 2 cut(s) 264, 633
PkrI GCNGC 2 cut(s) 314, 880
PleI GAGTC 1 cut(s) 298
PpsI GAGTC 1 cut(s) 298
Ppu21I YACGTR 1 cut(s) 616
PpuMI RGGWCCY 1 cut(s) 581
Psp5II RGGWCCY 1 cut(s) 581
Psp6I CCWGG 4 cut(s) 272, 695, 745, 771
PspFI CCCAGC 3 cut(s) 533, 702, 816
PspGI CCWGG 4 cut(s) 272, 695, 745, 771
PspN4I GGNNCC 3 cut(s) 138, 795, 815
PspPI GGNCC 3 cut(s) 6, 581, 813
PspPPI RGGWCCY 1 cut(s) 581
PstI CTGCAG 1 cut(s) 314
PstNI CAGNNNCTG 1 cut(s) 702
RsaI GTAC 1 cut(s) 764
RsaNI GTAC 1 cut(s) 763
RseI CAYNNNNRTG 1 cut(s) 791
SaqAI TTAA 2 cut(s) 737, 789
SatI GCNGC 2 cut(s) 313, 879
Sau96I GGNCC 3 cut(s) 6, 581, 813
SchI GAGTC 1 cut(s) 298
ScrFI CCNGG 6 cut(s) 266, 274, 635, 697, 747, 773
SfaNI GCATC 1 cut(s) 369
SfcI CTRYAG 1 cut(s) 310
SinI GGWCC 2 cut(s) 6, 581
SmiMI CAYNNNNRTG 1 cut(s) 791
SmlI CTYRAG 2 cut(s) 86, 690
SmoI CTYRAG 2 cut(s) 86, 690
SnaBI TACGTA 1 cut(s) 616
SsiI CCGC 3 cut(s) 4, 358, 828
SspI AATATT 1 cut(s) 332
SspMI CTAG 3 cut(s) 132, 383, 573
StyD4I CCNGG 6 cut(s) 264, 272, 633, 695, 745, 771
StyI CCWWGG 1 cut(s) 873
TaaI ACNGT 7 cut(s) 15, 77, 244, 287, 547, 556, 731
TaiI ACGT 1 cut(s) 618
TaqI TCGA 1 cut(s) 646
TatI WGTACW 1 cut(s) 762
Tru1I TTAA 2 cut(s) 737, 789
Tru9I TTAA 2 cut(s) 737, 789
TscAI CASTG 5 cut(s) 166, 249, 314, 552, 734
TseFI GTSAC 1 cut(s) 731
TseI GCWGC 2 cut(s) 312, 878
Tsp45I GTSAC 1 cut(s) 731
TspDTI ATGAA 2 cut(s) 841, 872
TspRI CASTG 5 cut(s) 166, 249, 314, 552, 734
Van91I CCANNNNNTGG 1 cut(s) 702
VpaK11BI GGWCC 2 cut(s) 6, 581
XagI CCTNNNNNAGG 1 cut(s) 576
XspI CTAG 3 cut(s) 132, 383, 573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.