pycom07g16860

Acetyltransferase (GNAT) domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
OG0009315
Physical Location & Seq
Reverse (-)
19355222 .. 19357378
2157 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g16860.1

Sequence Viewer

Length: 873 bp
ATGCGGACGATACCGTTGGGAATATCAGCAGCATCCCCAACCTTCTTAAACAGCTCCTTCCTCAACAGTCTCAACCTCAACAGACCAAACCCTCTTGTTCCTCTTACTAATTCCACTTCTTCCAGGGTTCCTGTTCCTGTCTACACTTCCGCTGATGACCTCTCTTTCCTTAACTTCTCCAAATCTGGAGTTTGCAGAGCCAGTCAAGTGGCTGATTTATTTCCCACGGTGTCTCCTGAGATTGTGGTCCGGGAGGCGCGGGTAGAGGACTGTTGGGAGGTGGCTGAGACACATTGCAGCTCCTTCTTCCCCGAGTATTCTTTCCCCTTAGATTTTGTTCTGAGGATTGACCGGCTGGTGGCAATGCTGGCCGGATTTTCTTTACCAAATGGTTGTAAGAGGACTTGTCTGGTTGCTGTGATTGGTAATGCTGGTGATGAAACGATCCTCTTCGGGAGGGATGATTTTAAGGTTGGCAGTTTTGATGGGAAGTTCAGTCTCAATAGGAGGTATGTGGCTGGAATATTGACTGTGGATACTGTTGCTGATTTTCTTCCGAGAAAAGGGCCGCTTCGGCAGAGAAGGAAAGGAGTTGCGTACGTGTCAAACGTTGCTGTCCGGGAGAGTTTTAGGCGAAGAGGAATAGCTAAAAAGCTAATAGCTAAAGCAGAAGCCCAAGCCAGGAGCTGGGATTGCCGTGCCATTGCATTGCACTGCGACTTGAACAATCCCGGAGCCGTAAAGCTGTACAAAGGCCAGGGTTTCAAAAGCATCAAGGTGCCTGAAGGAGCAAACTGGCCCCAGCCCAAGACCGGTCCGGATGTTCGGTTCAACTTCATGATGAAGCTTTTGAACCCCAAGACTTCTGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Acetyltransf_1

Protein Analysis

291

Amino Acids

31.95

Weight (kDa)

9.7

Isoelectric Point (pI)

31.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 191 - 255 6.5e-16 Acetyltransferase (GNAT) family
Acetyltransf_10 PF13673 193 - 260 1.2e-07 Acetyltransferase (GNAT) domain
Acetyltransf_7 PF13508 198 - 256 3.2e-09 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0009315)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G39000 AT2G39000 AT2G39000 AT2G39000
fragaria_vesca FvH4_7g19440 FvH4_7g19440 FvH4_7g19440
malus_domestica MD01G1108300.v1.1 MD07G1174400.v1.1
prunus_persica Prupe.2G213200_v2.0.a1
pyrus_communis pycom01g13520 pycom07g16860
rosa_chinensis RchiOBHm_Chr1g0363321
rosa_laevigata RLG00000027574
rosa_multiflora Rmu_sc0011095.1_g000002
rosa_roxburghii Rroxscaffold_4G00293280
rosa_rugosa Rorug01G0306300
rosa_samantha Rh1AG315100 Rh1BG278300 Rh1CG294800 Rh1DG309400
rosa_wichuraiana Rw1G027920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 778
AccB7I CCANNNNNTGG 1 cut(s) 687
AccI GTMKAC 1 cut(s) 141
AccII CGCG 1 cut(s) 259
AccIII TCCGGA 1 cut(s) 817
AciI CCGC 4 cut(s) 4, 150, 259, 569
AclI AACGTT 1 cut(s) 609
AclWI GGATC 1 cut(s) 439
AcoI YGGCCR 1 cut(s) 369
AcuI CTGAAG 1 cut(s) 804
AfaI GTAC 2 cut(s) 599, 749
AfiI CCNNNNNNNGG 5 cut(s) 358, 563, 681, 687, 812
AflIII ACRYGT 1 cut(s) 600
AgeI ACCGGT 1 cut(s) 812
AgsI TTSAA 4 cut(s) 724, 766, 832, 853
AjnI CCWGG 3 cut(s) 122, 680, 756
AloI GAACNNNNNNTCC 2 cut(s) 812, 844
AluBI AGCT 8 cut(s) 54, 300, 647, 655, 662, 687, 745, 847
AluI AGCT 8 cut(s) 54, 300, 647, 655, 662, 687, 745, 847
Alw26I GTCTC 4 cut(s) 74, 237, 281, 503
AlwI GGATC 1 cut(s) 439
AlwNI CAGNNNCTG 1 cut(s) 687
Ama87I CYCGRG 1 cut(s) 311
Aor13HI TCCGGA 1 cut(s) 817
AoxI GGCC 4 cut(s) 369, 566, 754, 797
ApeKI GCWGC 2 cut(s) 29, 297
AsiGI ACCGGT 1 cut(s) 812
AspLEI GCGC 1 cut(s) 259
AspS9I GGNCC 4 cut(s) 247, 566, 798, 815
AsuC2I CCSGG 3 cut(s) 251, 620, 732
AsuHPI GGTGA 1 cut(s) 446
AvaI CYCGRG 1 cut(s) 311
AvaII GGWCC 2 cut(s) 247, 815
BanI GGYRCC 1 cut(s) 778
BbvI GCAGC 2 cut(s) 41, 309
BccI CCATC 1 cut(s) 479
BceAI ACGGC 2 cut(s) 681, 722
BciT130I CCWGG 3 cut(s) 124, 682, 758
BciVI GTATCC 1 cut(s) 529
BcnI CCSGG 3 cut(s) 251, 620, 732
BcoDI GTCTC 4 cut(s) 74, 237, 281, 503
BfuI GTATCC 1 cut(s) 529
BglI GCCNNNNNGGC 1 cut(s) 574
BisI GCNGC 3 cut(s) 30, 298, 569
BlsI GCNGC 3 cut(s) 31, 299, 570
Bme1390I CCNGG 6 cut(s) 124, 251, 620, 682, 732, 758
Bme18I GGWCC 2 cut(s) 247, 815
BmeT110I CYCGRG 1 cut(s) 311
BmgT120I GGNCC 4 cut(s) 247, 566, 798, 815
BmiI GGNNCC 4 cut(s) 129, 736, 780, 800
BmrFI CCNGG 6 cut(s) 124, 251, 620, 682, 732, 758
BmsI GCATC 2 cut(s) 41, 780
BpmI CTGGAG 1 cut(s) 207
BpuMI CCSGG 3 cut(s) 251, 620, 732
BsaAI YACGTR 1 cut(s) 601
BsaJI CCNNGG 3 cut(s) 123, 225, 757
BsaWI WCCGGW 2 cut(s) 812, 817
BsaXI ACNNNNNCTCC 2 cut(s) 217, 247
Bsc4I CCNNNNNNNGG 5 cut(s) 358, 563, 681, 687, 812
Bse118I RCCGGY 2 cut(s) 351, 812
Bse1I ACTGG 2 cut(s) 201, 800
Bse3DI GCAATG 4 cut(s) 292, 369, 702, 707
BseAI TCCGGA 1 cut(s) 817
BseBI CCWGG 3 cut(s) 124, 682, 758
BseDI CCNNGG 3 cut(s) 123, 225, 757
BseGI GGATG 3 cut(s) 32, 466, 826
BseLI CCNNNNNNNGG 5 cut(s) 358, 563, 681, 687, 812
BseMI GCAATG 4 cut(s) 292, 369, 702, 707
BseMII CTCAG 3 cut(s) 228, 276, 332
BseNI ACTGG 2 cut(s) 201, 800
BseXI GCAGC 2 cut(s) 41, 309
BseYI CCCAGC 2 cut(s) 687, 801
Bsh1236I CGCG 1 cut(s) 259
BshFI GGCC 4 cut(s) 371, 568, 756, 799
BshNI GGYRCC 1 cut(s) 778
BshTI ACCGGT 1 cut(s) 812
BsiHKCI CYCGRG 1 cut(s) 311
BsiSI CCGG 7 cut(s) 250, 352, 372, 619, 732, 813, 818
BsiWI CGTACG 1 cut(s) 597
BslI CCNNNNNNNGG 5 cut(s) 358, 563, 681, 687, 812
BsmAI GTCTC 4 cut(s) 74, 237, 281, 503
BsnI GGCC 4 cut(s) 371, 568, 756, 799
BsoBI CYCGRG 1 cut(s) 311
Bsp13I TCCGGA 1 cut(s) 817
Bsp1407I TGTACA 1 cut(s) 747
Bsp143I GATC 1 cut(s) 444
BspACI CCGC 4 cut(s) 4, 150, 259, 569
BspANI GGCC 4 cut(s) 371, 568, 756, 799
BspCNI CTCAG 3 cut(s) 229, 277, 333
BspEI TCCGGA 1 cut(s) 817
BspFNI CGCG 1 cut(s) 259
BspHI TCATGA 1 cut(s) 837
BspLI GGNNCC 4 cut(s) 129, 736, 780, 800
BspPI GGATC 1 cut(s) 439
BspT107I GGYRCC 1 cut(s) 778
BsrDI GCAATG 4 cut(s) 292, 369, 702, 707
BsrFI RCCGGY 2 cut(s) 351, 812
BsrGI TGTACA 1 cut(s) 747
BsrI ACTGG 2 cut(s) 201, 800
BssAI RCCGGY 2 cut(s) 351, 812
BssECI CCNNGG 3 cut(s) 123, 225, 757
BssMI GATC 1 cut(s) 444
Bst2UI CCWGG 3 cut(s) 124, 682, 758
Bst4CI ACNGT 6 cut(s) 15, 68, 229, 272, 532, 541
Bst6I CTCTTC 2 cut(s) 455, 631
BstAUI TGTACA 1 cut(s) 747
BstBAI YACGTR 1 cut(s) 601
BstC8I GCNNGC 1 cut(s) 369
BstDEI CTNAG 5 cut(s) 237, 285, 328, 341, 870
BstDSI CCRYGG 1 cut(s) 225
BstF5I GGATG 3 cut(s) 32, 466, 826
BstFNI CGCG 1 cut(s) 259
BstHHI GCGC 1 cut(s) 259
BstKTI GATC 1 cut(s) 447
BstMAI GTCTC 4 cut(s) 74, 237, 281, 503
BstMBI GATC 1 cut(s) 444
BstMWI GCNNNNNNNGC 3 cut(s) 368, 574, 693
BstNI CCWGG 3 cut(s) 124, 682, 758
BstSCI CCNGG 6 cut(s) 122, 249, 618, 680, 730, 756
BstUI CGCG 1 cut(s) 259
BstV1I GCAGC 2 cut(s) 41, 309
BstXI CCANNNNNNTGG 1 cut(s) 208
BsuI GTATCC 1 cut(s) 529
BsuRI GGCC 4 cut(s) 371, 568, 756, 799
BtgI CCRYGG 1 cut(s) 225
BtsCI GGATG 3 cut(s) 32, 466, 826
BtsI GCAGTG 1 cut(s) 712
BtsIMutI CAGTG 1 cut(s) 712
Cac8I GCNNGC 1 cut(s) 369
CaiI CAGNNNCTG 1 cut(s) 687
CciI TCATGA 1 cut(s) 837
CfoI GCGC 1 cut(s) 259
Cfr10I RCCGGY 2 cut(s) 351, 812
Cfr13I GGNCC 4 cut(s) 247, 566, 798, 815
CpoI CGGWCCG 1 cut(s) 815
Csp6I GTAC 2 cut(s) 598, 748
CspAI ACCGGT 1 cut(s) 812
CspI CGGWCCG 1 cut(s) 815
CviAII CATG 1 cut(s) 838
CviQI GTAC 2 cut(s) 598, 748
DdeI CTNAG 5 cut(s) 237, 285, 328, 341, 870
DpnI GATC 1 cut(s) 446
DpnII GATC 1 cut(s) 444
EaeI YGGCCR 1 cut(s) 369
Eam1104I CTCTTC 2 cut(s) 455, 631
EarI CTCTTC 2 cut(s) 455, 631
Eco47I GGWCC 2 cut(s) 247, 815
Eco57I CTGAAG 1 cut(s) 804
Eco88I CYCGRG 1 cut(s) 311
EcoRII CCWGG 3 cut(s) 122, 680, 756
FaeI CATG 1 cut(s) 841
FaiI YATR 2 cut(s) 513, 839
FalI AAGNNNNNCTT 2 cut(s) 555, 587
FatI CATG 1 cut(s) 837
FauI CCCGC 1 cut(s) 252
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 3 cut(s) 30, 298, 569
FokI GGATG 3 cut(s) 19, 473, 833
Fsp4HI GCNGC 3 cut(s) 30, 298, 569
GlaI GCGC 1 cut(s) 258
GluI GCNGC 3 cut(s) 30, 298, 569
GsaI CCCAGC 2 cut(s) 691, 805
GsuI CTGGAG 1 cut(s) 207
HaeIII GGCC 4 cut(s) 371, 568, 756, 799
HapII CCGG 7 cut(s) 250, 352, 372, 619, 732, 813, 818
HhaI GCGC 1 cut(s) 259
Hin1II CATG 1 cut(s) 841
Hin6I GCGC 1 cut(s) 257
HinP1I GCGC 1 cut(s) 257
HindIII AAGCTT 1 cut(s) 845
HpaII CCGG 7 cut(s) 250, 352, 372, 619, 732, 813, 818
HphI GGTGA 1 cut(s) 446
Hpy166II GTNNAC 1 cut(s) 142
Hpy188I TCNGA 2 cut(s) 342, 558
Hpy188III TCNNGA 5 cut(s) 186, 236, 454, 818, 838
Hpy8I GTNNAC 1 cut(s) 142
HpyAV CCTTC 5 cut(s) 52, 67, 313, 576, 779
HpyCH4III ACNGT 6 cut(s) 15, 68, 229, 272, 532, 541
HpyCH4IV ACGT 2 cut(s) 600, 609
HpyCH4V TGCA 4 cut(s) 195, 297, 707, 712
HpyF10VI GCNNNNNNNGC 3 cut(s) 368, 574, 693
HpyF3I CTNAG 5 cut(s) 237, 285, 328, 341, 870
HpySE526I ACGT 2 cut(s) 600, 609
Hsp92II CATG 1 cut(s) 841
HspAI GCGC 1 cut(s) 257
Kpn2I TCCGGA 1 cut(s) 817
Kzo9I GATC 1 cut(s) 444
LmnI GCTCC 5 cut(s) 59, 305, 684, 734, 788
Lsp1109I GCAGC 2 cut(s) 41, 309
LweI GCATC 2 cut(s) 41, 780
MaeII ACGT 2 cut(s) 600, 609
MalI GATC 1 cut(s) 446
MboI GATC 1 cut(s) 444
MboII GAAGA 5 cut(s) 111, 298, 442, 545, 648
MluCI AATT 1 cut(s) 109
MroI TCCGGA 1 cut(s) 817
MseI TTAA 3 cut(s) 47, 171, 468
MslI CAYNNNNRTG 1 cut(s) 776
MspA1I CMGCKG 1 cut(s) 152
MspI CCGG 7 cut(s) 250, 352, 372, 619, 732, 813, 818
MspR9I CCNGG 6 cut(s) 124, 251, 620, 682, 732, 758
MvaI CCWGG 3 cut(s) 124, 682, 758
MvnI CGCG 1 cut(s) 259
MwoI GCNNNNNNNGC 3 cut(s) 368, 574, 693
NciI CCSGG 3 cut(s) 251, 620, 732
NdeII GATC 1 cut(s) 444
NlaIII CATG 1 cut(s) 841
NlaIV GGNNCC 4 cut(s) 129, 736, 780, 800
PagI TCATGA 1 cut(s) 837
PcsI WCGNNNNNNNCGW 1 cut(s) 606
Pfl23II CGTACG 1 cut(s) 597
PflMI CCANNNNNTGG 1 cut(s) 687
PfoI TCCNGGA 3 cut(s) 249, 618, 730
PinAI ACCGGT 1 cut(s) 812
PkrI GCNGC 3 cut(s) 31, 299, 570
Ppu21I YACGTR 1 cut(s) 601
Psp1406I AACGTT 1 cut(s) 609
Psp6I CCWGG 3 cut(s) 122, 680, 756
PspFI CCCAGC 2 cut(s) 687, 801
PspGI CCWGG 3 cut(s) 122, 680, 756
PspLI CGTACG 1 cut(s) 597
PspN4I GGNNCC 4 cut(s) 129, 736, 780, 800
PspPI GGNCC 4 cut(s) 247, 566, 798, 815
PstNI CAGNNNCTG 1 cut(s) 687
RsaI GTAC 2 cut(s) 599, 749
RsaNI GTAC 2 cut(s) 598, 748
RseI CAYNNNNRTG 1 cut(s) 776
Rsr2I CGGWCCG 1 cut(s) 815
RsrII CGGWCCG 1 cut(s) 815
SaqAI TTAA 3 cut(s) 47, 171, 468
SatI GCNGC 3 cut(s) 30, 298, 569
Sau3AI GATC 1 cut(s) 444
Sau96I GGNCC 4 cut(s) 247, 566, 798, 815
ScrFI CCNGG 6 cut(s) 124, 251, 620, 682, 732, 758
SfaNI GCATC 2 cut(s) 41, 780
SinI GGWCC 2 cut(s) 247, 815
SmiMI CAYNNNNRTG 1 cut(s) 776
Sse9I AATT 1 cut(s) 109
SsiI CCGC 4 cut(s) 4, 150, 259, 569
SspI AATATT 1 cut(s) 525
StyD4I CCNGG 6 cut(s) 122, 249, 618, 680, 730, 756
TaaI ACNGT 6 cut(s) 15, 68, 229, 272, 532, 541
TaiI ACGT 2 cut(s) 603, 612
TasI AATT 1 cut(s) 109
TatI WGTACW 1 cut(s) 747
TauI GCSGC 1 cut(s) 571
Tru1I TTAA 3 cut(s) 47, 171, 468
Tru9I TTAA 3 cut(s) 47, 171, 468
TscAI CASTG 1 cut(s) 719
TseI GCWGC 2 cut(s) 29, 297
TspDTI ATGAA 3 cut(s) 453, 826, 857
TspRI CASTG 1 cut(s) 719
Van91I CCANNNNNTGG 1 cut(s) 687
VpaK11BI GGWCC 2 cut(s) 247, 815
XmiI GTMKAC 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.