Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0006055

Physical Location & Seq

Genomic Coordinates Forward (+)

26029984 .. 26032789

Gene Structure 2806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G240500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1086 bp

ATGAAGGCACTCATTCTTGTTGGAGGTTTTGGAACACGTTTGCGGCCATTGACACTCAGTGTCCCTAAGCCGCTTGTTGAATTTGCAAACAAACCCATGATCCTGCATCAGATAGAGGCTCTTAAGGCAATTGGTGTTAGCGAAGTGGTTCTGGCGATCAATTACCAACCAGAGGTGATGATGACTTTCCTGAAGGAGTTTGAGACAAAGGTTGGCATCAAGATCACATGCTCACAAGAGACTGAGCCCCTTGGTACTGCTGGACCTCTGGCTCTTGCTAGAGACAAACTGATAGATGATTCTGGCGAGCCCTTCTTTGTCCTTAACAGTGATGTTATCAGCGAGTACCCATTTAAGCAAATGATCGAATTCCATAAATCCCATGGAGGAGAAGCTTCCATAATGGTGACCAAGGTGGATGAGCCATCGAAATATGGAGTGGTGGTTATGGAAGAATCTACAGGGAAAGTTCAGAAATTTGTAGAGAAACCAAAACTGTTTGTTGGTAACAAAATCAATGCTGGAATATACCTGTTGAACCCCTCAGTTCTTGATCGAATTGAGCTGAGACCAACTTCAATTGAGAAAGAGGTATTCCCAAATATTGCAGCAGAGAATAAGCTCTTCGCAATGGTCCTTCCAGGGTTTTGGATGGACATTGGGCAACCAAGGGATTATATTACAGGCCTGAGACTCTACTTGGACTCATTGAGGAAGAACTCTTCATCTAAGTTGGCCAGAGGCTCCAATGTTGTGGGAAATGTTCTGGTGGATGAGACTGCCAAAATTGGAGAGGGGTGCCTGATTGGACCAGATGTTGCAATTGGTCCGGGTTGCGTTGTTGAGTCAGGAGTTAGGCTATCTCGCTGTACAGTAATGCGTGGAGTCCGGATCAAGAAGCATGCTTGCATTTCCGGCAGTATCATCGGATGGCACTCCACAGTTGGACAATGGGCTCGTGTAGAGAACATGACTATCCTCGGAGAAGATGTTCATGTAAGCGATGAAATTTACAGTAATGGAGGTGTGGTTTTGCCCCACAAAGAAATCAAGTCGAGCATTTTGAAGCCAGAAATTGTAATGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0000302 GO:0001101 GO:0003674 GO:0003824 GO:0004475 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005975 GO:0005976 GO:0005996 GO:0006073 GO:0006082 GO:0006732 GO:0006766 GO:0006767 GO:0006950 GO:0006952 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0008905 GO:0009058 GO:0009059 GO:0009108 GO:0009110 GO:0009250 GO:0009266 GO:0009408 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0010033 GO:0010035 GO:0010193 GO:0016051 GO:0016053 GO:0016740 GO:0016772 GO:0016779 GO:0019752 GO:0019852 GO:0019853 GO:0030243 GO:0030244 GO:0033692 GO:0034637 GO:0034645 GO:0042221 GO:0042364 GO:0042493 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046364 GO:0046394 GO:0046677 GO:0050896 GO:0051186 GO:0051188 GO:0051273 GO:0051274 GO:0051704 GO:0051707 GO:0060359 GO:0070568 GO:0071704 GO:0098542 GO:1901576 GO:1901698 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00051 ko00520 ko01100 ko01110 map00051 map00520 map01100 map01110

Pfam Domains

Protein Families

Hexapep NTP_transferase

Protein Analysis

362

Amino Acids

39.54

Weight (kDa)

7.05

Isoelectric Point (pI)

35.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006055)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39770 AT2G39770 AT2G39770 AT3G55590
fragaria_vesca	FvH4_7g23380 FvH4_7g23380 FvH4_7g23380 FvH4_7g23380 FvH4_7g23380
malus_domestica	MD01G1139900.v1.1 MD07G1204200.v1.1
prunus_persica	Prupe.2G240500_v2.0.a1
pyrus_communis	pycom01g16040 pycom07g19080
rosa_chinensis	RchiOBHm_Chr1g0368511
rosa_laevigata	RLG00000027207
rosa_multiflora	Rmu_co8389653.1_g000001 Rmu_sc0006908.1_g000002 Rmu_sc0011394.1_g000010
rosa_roxburghii	Rroxscaffold_4G00288480
rosa_rugosa	Rorug01G0342400 Rorug01G0342500 Rorug01G0342500
rosa_samantha	Rh1AG349800 Rh1BG312900 Rh1CG327700 Rh1DG344400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	798
AccIII	TCCGGA	1 cut(s)	888
AciI	CCGC	2 cut(s)	43, 71
AclWI	GGATC	2 cut(s)	94, 899
AcoI	YGGCCR	2 cut(s)	44, 735
AcsI	RAATTY	4 cut(s)	80, 368, 476, 1008
AcuI	CTGAAG	1 cut(s)	212
AdeI	CACNNNGTG	1 cut(s)	59
AfaI	GTAC	3 cut(s)	256, 347, 871
AfiI	CCNNNNNNNGG	1 cut(s)	172
AflII	CTTAAG	1 cut(s)	122
AflIII	ACRYGT	1 cut(s)	35
AgsI	TTSAA	4 cut(s)	80, 538, 579, 1066
AjnI	CCWGG	1 cut(s)	640
AloI	GAACNNNNNNTCC	2 cut(s)	975, 1007
AluBI	AGCT	3 cut(s)	395, 565, 622
AluI	AGCT	3 cut(s)	395, 565, 622
Alw26I	GTCTC	6 cut(s)	197, 233, 276, 562, 685, 770
AlwI	GGATC	2 cut(s)	94, 899
Aor13HI	TCCGGA	1 cut(s)	888
AoxI	GGCC	3 cut(s)	44, 685, 735
ApeKI	GCWGC	1 cut(s)	608
ApoI	RAATTY	4 cut(s)	80, 368, 476, 1008
Asp700I	GAANNNNTTC	2 cut(s)	147, 990
AspS9I	GGNCC	4 cut(s)	263, 634, 809, 827
AsuC2I	CCSGG	1 cut(s)	831
AsuHPI	GGTGA	2 cut(s)	187, 418
AvaII	GGWCC	4 cut(s)	263, 634, 809, 827
BalI	TGGCCA	1 cut(s)	737
BanI	GGYRCC	1 cut(s)	798
BanII	GRGCYC	3 cut(s)	249, 312, 958
BauI	CACGAG	1 cut(s)	957
BbvI	GCAGC	1 cut(s)	620
BccI	CCATC	3 cut(s)	433, 646, 924
BcgI	CGANNNNNNTGC	2 cut(s)	907, 941
BciT130I	CCWGG	1 cut(s)	642
BcnI	CCSGG	1 cut(s)	831
BcoDI	GTCTC	6 cut(s)	197, 233, 276, 562, 685, 770
BfaI	CTAG	1 cut(s)	279
BfmI	CTRYAG	1 cut(s)	459
BfrI	CTTAAG	1 cut(s)	122
BisI	GCNGC	3 cut(s)	44, 71, 609
BlsI	GCNGC	3 cut(s)	45, 72, 610
Bme1390I	CCNGG	2 cut(s)	642, 831
Bme18I	GGWCC	4 cut(s)	263, 634, 809, 827
BmgT120I	GGNCC	4 cut(s)	263, 634, 809, 827
BmiI	GGNNCC	2 cut(s)	745, 800
BmrFI	CCNGG	2 cut(s)	642, 831
BmsI	GCATC	2 cut(s)	115, 225
Bpu10I	CCTNAGC	1 cut(s)	66
BpuMI	CCSGG	1 cut(s)	831
BsaI	GGTCTC	1 cut(s)	562
BsaJI	CCNNGG	6 cut(s)	250, 382, 411, 641, 668, 979
BsaWI	WCCGGW	1 cut(s)	888
BsaXI	ACNNNNNCTCC	6 cut(s)	429, 459, 975, 1005, 1014, 1044
Bsc4I	CCNNNNNNNGG	1 cut(s)	172
Bse3DI	GCAATG	1 cut(s)	636
BseAI	TCCGGA	1 cut(s)	888
BseBI	CCWGG	1 cut(s)	642
BseDI	CCNNGG	6 cut(s)	250, 382, 411, 641, 668, 979
BseGI	GGATG	4 cut(s)	424, 657, 778, 935
BseLI	CCNNNNNNNGG	1 cut(s)	172
BseMI	GCAATG	1 cut(s)	636
BseMII	CTCAG	5 cut(s)	70, 234, 557, 558, 680
BseRI	GAGGAG	1 cut(s)	402
BseXI	GCAGC	1 cut(s)	620
BshFI	GGCC	3 cut(s)	46, 687, 737
BshNI	GGYRCC	1 cut(s)	798
BsiSI	CCGG	3 cut(s)	830, 889, 915
BslFI	GGGAC	1 cut(s)	47
BslI	CCNNNNNNNGG	1 cut(s)	172
BsmAI	GTCTC	6 cut(s)	197, 233, 276, 562, 685, 770
BsmFI	GGGAC	1 cut(s)	47
BsnI	GGCC	3 cut(s)	46, 687, 737
Bso31I	GGTCTC	1 cut(s)	562
Bsp1286I	GDGCHC	3 cut(s)	249, 312, 958
Bsp13I	TCCGGA	1 cut(s)	888
Bsp1407I	TGTACA	1 cut(s)	869
Bsp143I	GATC	6 cut(s)	99, 156, 222, 363, 553, 891
Bsp19I	CCATGG	1 cut(s)	382
BspACI	CCGC	2 cut(s)	43, 71
BspANI	GGCC	3 cut(s)	46, 687, 737
BspCNI	CTCAG	5 cut(s)	69, 235, 557, 558, 681
BspEI	TCCGGA	1 cut(s)	888
BspLI	GGNNCC	2 cut(s)	745, 800
BspPI	GGATC	2 cut(s)	94, 899
BspQI	GCTCTTC	1 cut(s)	629
BspT107I	GGYRCC	1 cut(s)	798
BspTI	CTTAAG	1 cut(s)	122
BspTNI	GGTCTC	1 cut(s)	562
BsrDI	GCAATG	1 cut(s)	636
BsrGI	TGTACA	1 cut(s)	869
BssECI	CCNNGG	6 cut(s)	250, 382, 411, 641, 668, 979
BssMI	GATC	6 cut(s)	99, 156, 222, 363, 553, 891
BssSI	CACGAG	1 cut(s)	957
BssT1I	CCWWGG	4 cut(s)	250, 382, 411, 668
Bst2BI	CACGAG	1 cut(s)	957
Bst2UI	CCWGG	1 cut(s)	642
Bst4CI	ACNGT	5 cut(s)	329, 498, 874, 943, 1016
Bst6I	CTCTTC	2 cut(s)	629, 727
BstAFI	CTTAAG	1 cut(s)	122
BstAUI	TGTACA	1 cut(s)	869
BstC8I	GCNNGC	3 cut(s)	308, 903, 907
BstDEI	CTNAG	7 cut(s)	56, 66, 243, 544, 566, 689, 729
BstDSI	CCRYGG	1 cut(s)	382
BstEII	GGTNACC	1 cut(s)	406
BstF5I	GGATG	4 cut(s)	424, 657, 778, 935
BstKTI	GATC	6 cut(s)	102, 159, 225, 366, 556, 894
BstMAI	GTCTC	6 cut(s)	197, 233, 276, 562, 685, 770
BstMBI	GATC	6 cut(s)	99, 156, 222, 363, 553, 891
BstMWI	GCNNNNNNNGC	2 cut(s)	125, 915
BstNI	CCWGG	1 cut(s)	642
BstNSI	RCATGY	2 cut(s)	231, 905
BstPI	GGTNACC	1 cut(s)	406
BstSCI	CCNGG	2 cut(s)	640, 829
BstSFI	CTRYAG	1 cut(s)	459
BstV1I	GCAGC	1 cut(s)	620
BstXI	CCANNNNNNTGG	2 cut(s)	648, 754
BsuRI	GGCC	3 cut(s)	46, 687, 737
BtgI	CCRYGG	1 cut(s)	382
BtgZI	GCGATG	1 cut(s)	1017
BtsCI	GGATG	4 cut(s)	424, 657, 778, 935
BtsIMutI	CAGTG	2 cut(s)	64, 334
Cac8I	GCNNGC	3 cut(s)	308, 903, 907
Cfr13I	GGNCC	4 cut(s)	263, 634, 809, 827
Csp6I	GTAC	3 cut(s)	255, 346, 870
CviAII	CATG	6 cut(s)	97, 228, 383, 902, 970, 995
CviQI	GTAC	3 cut(s)	255, 346, 870
DdeI	CTNAG	7 cut(s)	56, 66, 243, 544, 566, 689, 729
DpnI	GATC	6 cut(s)	101, 158, 224, 365, 555, 893
DpnII	GATC	6 cut(s)	99, 156, 222, 363, 553, 891
DraIII	CACNNNGTG	1 cut(s)	59
EaeI	YGGCCR	2 cut(s)	44, 735
Eam1104I	CTCTTC	2 cut(s)	629, 727
EarI	CTCTTC	2 cut(s)	629, 727
Eco130I	CCWWGG	4 cut(s)	250, 382, 411, 668
Eco147I	AGGCCT	1 cut(s)	687
Eco24I	GRGCYC	3 cut(s)	249, 312, 958
Eco31I	GGTCTC	1 cut(s)	562
Eco47I	GGWCC	4 cut(s)	263, 634, 809, 827
Eco57I	CTGAAG	1 cut(s)	212
Eco91I	GGTNACC	1 cut(s)	406
EcoO65I	GGTNACC	1 cut(s)	406
EcoRI	GAATTC	1 cut(s)	368
EcoRII	CCWGG	1 cut(s)	640
EcoT14I	CCWWGG	4 cut(s)	250, 382, 411, 668
EcoT38I	GRGCYC	3 cut(s)	249, 312, 958
ErhI	CCWWGG	4 cut(s)	250, 382, 411, 668
FaeI	CATG	6 cut(s)	100, 231, 386, 905, 973, 998
FaqI	GGGAC	1 cut(s)	47
FatI	CATG	6 cut(s)	96, 227, 382, 901, 969, 994
Fnu4HI	GCNGC	3 cut(s)	44, 71, 609
FokI	GGATG	4 cut(s)	431, 664, 785, 942
FriOI	GRGCYC	3 cut(s)	249, 312, 958
Fsp4HI	GCNGC	3 cut(s)	44, 71, 609
FspBI	CTAG	1 cut(s)	279
GluI	GCNGC	3 cut(s)	44, 71, 609
HaeIII	GGCC	3 cut(s)	46, 687, 737
HapII	CCGG	3 cut(s)	830, 889, 915
Hin1II	CATG	6 cut(s)	100, 231, 386, 905, 973, 998
HindIII	AAGCTT	1 cut(s)	393
HinfI	GANTC	6 cut(s)	299, 455, 693, 704, 845, 885
HpaII	CCGG	3 cut(s)	830, 889, 915
HphI	GGTGA	2 cut(s)	187, 418
Hpy188I	TCNGA	4 cut(s)	111, 474, 929, 983
Hpy188III	TCNNGA	6 cut(s)	190, 220, 551, 849, 889, 895
HpyAV	CCTTC	3 cut(s)	187, 322, 647
HpyCH4III	ACNGT	5 cut(s)	329, 498, 874, 943, 1016
HpyCH4IV	ACGT	1 cut(s)	37
HpyCH4V	TGCA	5 cut(s)	86, 106, 608, 821, 909
HpyF10VI	GCNNNNNNNGC	2 cut(s)	125, 915
HpyF3I	CTNAG	7 cut(s)	56, 66, 243, 544, 566, 689, 729
HpySE526I	ACGT	1 cut(s)	37
Hsp92II	CATG	6 cut(s)	100, 231, 386, 905, 973, 998
Kpn2I	TCCGGA	1 cut(s)	888
Kzo9I	GATC	6 cut(s)	99, 156, 222, 363, 553, 891
LguI	GCTCTTC	1 cut(s)	629
LmnI	GCTCC	1 cut(s)	749
Lsp1109I	GCAGC	1 cut(s)	620
LweI	GCATC	2 cut(s)	115, 225
MaeI	CTAG	1 cut(s)	279
MaeII	ACGT	1 cut(s)	37
MaeIII	GTNAC	2 cut(s)	406, 506
MalI	GATC	6 cut(s)	101, 158, 224, 365, 555, 893
MboI	GATC	6 cut(s)	99, 156, 222, 363, 553, 891
MboII	GAAGA	5 cut(s)	464, 616, 714, 727, 998
MfeI	CAATTG	3 cut(s)	129, 579, 822
MhlI	GDGCHC	3 cut(s)	249, 312, 958
MlsI	TGGCCA	1 cut(s)	737
MluNI	TGGCCA	1 cut(s)	737
MlyI	GAGTC	4 cut(s)	687, 698, 854, 894
MmeI	TCCRAC	1 cut(s)	925
Mox20I	TGGCCA	1 cut(s)	737
MroI	TCCGGA	1 cut(s)	888
MroXI	GAANNNNTTC	2 cut(s)	147, 990
MscI	TGGCCA	1 cut(s)	737
MseI	TTAA	3 cut(s)	123, 324, 354
MslI	CAYNNNNRTG	1 cut(s)	404
Msp20I	TGGCCA	1 cut(s)	737
MspCI	CTTAAG	1 cut(s)	122
MspI	CCGG	3 cut(s)	830, 889, 915
MspR9I	CCNGG	2 cut(s)	642, 831
MunI	CAATTG	3 cut(s)	129, 579, 822
MvaI	CCWGG	1 cut(s)	642
MwoI	GCNNNNNNNGC	2 cut(s)	125, 915
NciI	CCSGG	1 cut(s)	831
NcoI	CCATGG	1 cut(s)	382
NdeII	GATC	6 cut(s)	99, 156, 222, 363, 553, 891
NlaIII	CATG	6 cut(s)	100, 231, 386, 905, 973, 998
NlaIV	GGNNCC	2 cut(s)	745, 800
NmuCI	GTSAC	1 cut(s)	406
NspI	RCATGY	2 cut(s)	231, 905
PaeI	GCATGC	1 cut(s)	905
PceI	AGGCCT	1 cut(s)	687
PciSI	GCTCTTC	1 cut(s)	629
PdmI	GAANNNNTTC	2 cut(s)	147, 990
PfeI	GAWTC	2 cut(s)	299, 455
PkrI	GCNGC	3 cut(s)	45, 72, 610
PleI	GAGTC	4 cut(s)	687, 698, 853, 893
PpsI	GAGTC	4 cut(s)	687, 698, 853, 893
Psp6I	CCWGG	1 cut(s)	640
PspEI	GGTNACC	1 cut(s)	406
PspGI	CCWGG	1 cut(s)	640
PspN4I	GGNNCC	2 cut(s)	745, 800
PspPI	GGNCC	4 cut(s)	263, 634, 809, 827
RsaI	GTAC	3 cut(s)	256, 347, 871
RsaNI	GTAC	3 cut(s)	255, 346, 870
RseI	CAYNNNNRTG	1 cut(s)	404
SapI	GCTCTTC	1 cut(s)	629
SaqAI	TTAA	3 cut(s)	123, 324, 354
SatI	GCNGC	3 cut(s)	44, 71, 609
Sau3AI	GATC	6 cut(s)	99, 156, 222, 363, 553, 891
Sau96I	GGNCC	4 cut(s)	263, 634, 809, 827
SchI	GAGTC	4 cut(s)	687, 698, 854, 894
ScrFI	CCNGG	2 cut(s)	642, 831
SduI	GDGCHC	3 cut(s)	249, 312, 958
SfaNI	GCATC	2 cut(s)	115, 225
SfcI	CTRYAG	1 cut(s)	459
SinI	GGWCC	4 cut(s)	263, 634, 809, 827
SmiMI	CAYNNNNRTG	1 cut(s)	404
SmlI	CTYRAG	1 cut(s)	122
SmoI	CTYRAG	1 cut(s)	122
SphI	GCATGC	1 cut(s)	905
SseBI	AGGCCT	1 cut(s)	687
SsiI	CCGC	2 cut(s)	43, 71
SspI	AATATT	1 cut(s)	604
SspMI	CTAG	1 cut(s)	279
StuI	AGGCCT	1 cut(s)	687
StyD4I	CCNGG	2 cut(s)	640, 829
StyI	CCWWGG	4 cut(s)	250, 382, 411, 668
TaaI	ACNGT	5 cut(s)	329, 498, 874, 943, 1016
TaiI	ACGT	1 cut(s)	40
TaqI	TCGA	4 cut(s)	366, 428, 556, 1055
TatI	WGTACW	1 cut(s)	869
TauI	GCSGC	2 cut(s)	46, 73
TfiI	GAWTC	2 cut(s)	299, 455
Tru1I	TTAA	3 cut(s)	123, 324, 354
Tru9I	TTAA	3 cut(s)	123, 324, 354
TscAI	CASTG	2 cut(s)	64, 334
TseFI	GTSAC	1 cut(s)	406
TseI	GCWGC	1 cut(s)	608
Tsp45I	GTSAC	1 cut(s)	406
TspDTI	ATGAA	4 cut(s)	17, 714, 983, 1020
TspRI	CASTG	2 cut(s)	64, 334
Vha464I	CTTAAG	1 cut(s)	122
VpaK11BI	GGWCC	4 cut(s)	263, 634, 809, 827
XapI	RAATTY	4 cut(s)	80, 368, 476, 1008
XceI	RCATGY	2 cut(s)	231, 905
XcmI	CCANNNNNNNNNTGG	1 cut(s)	380
XmnI	GAANNNNTTC	2 cut(s)	147, 990
XspI	CTAG	1 cut(s)	279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.