amidase A
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05480 |
| fragaria_vesca | FvH4_7g24990 |
| prunus_persica | Prupe.2G255000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0370891 |
| rosa_laevigata | RLG00000027001 |
| rosa_multiflora | Rmu_co8367915.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00286150 |
| rosa_rugosa | Rorug01G0360200 |
| rosa_samantha | Rh1AG370000 Rh1BG333600 Rh1CG346900 Rh1DG364800 |
| rosa_wichuraiana | Rw1G032560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1344, 1563 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 323 |
| Acc65I | GGTACC | 2 cut(s) | 1184, 1437 |
| AccB1I | GGYRCC | 2 cut(s) | 1184, 1437 |
| AccI | GTMKAC | 2 cut(s) | 492, 876 |
| AccII | CGCG | 5 cut(s) | 291, 347, 440, 442, 840 |
| AccIII | TCCGGA | 1 cut(s) | 714 |
| AciI | CCGC | 9 cut(s) | 242, 342, 347, 358, 448, 797, 840, 1297, 1406 |
| AclWI | GGATC | 1 cut(s) | 1608 |
| AcoI | YGGCCR | 4 cut(s) | 133, 369, 624, 960 |
| AcsI | RAATTY | 2 cut(s) | 598, 802 |
| AcyI | GRCGYC | 1 cut(s) | 1004 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 570, 706, 1428, 1708 |
| AflIII | ACRYGT | 2 cut(s) | 756, 1506 |
| AgeI | ACCGGT | 2 cut(s) | 923, 952 |
| AgsI | TTSAA | 4 cut(s) | 1172, 1216, 1309, 1674 |
| AjiI | CACGTC | 2 cut(s) | 490, 511 |
| AjnI | CCWGG | 2 cut(s) | 263, 1468 |
| AleI | CACNNNNGTG | 1 cut(s) | 1490 |
| Alw21I | GWGCWC | 3 cut(s) | 132, 354, 1316 |
| Alw26I | GTCTC | 2 cut(s) | 1479, 1536 |
| AlwI | GGATC | 1 cut(s) | 1608 |
| Ama87I | CYCGRG | 3 cut(s) | 125, 281, 470 |
| Aor13HI | TCCGGA | 1 cut(s) | 714 |
| AoxI | GGCC | 7 cut(s) | 133, 277, 369, 624, 960, 1134, 1368 |
| ApeKI | GCWGC | 1 cut(s) | 444 |
| ApoI | RAATTY | 2 cut(s) | 598, 802 |
| AsiGI | ACCGGT | 2 cut(s) | 923, 952 |
| Asp718I | GGTACC | 2 cut(s) | 1184, 1437 |
| AspLEI | GCGC | 5 cut(s) | 293, 347, 442, 444, 840 |
| AspS9I | GGNCC | 3 cut(s) | 267, 1111, 1419 |
| AsuC2I | CCSGG | 1 cut(s) | 835 |
| AsuHPI | GGTGA | 7 cut(s) | 42, 409, 913, 1141, 1363, 1606, 1667 |
| AsuII | TTCGAA | 1 cut(s) | 406 |
| AvaI | CYCGRG | 3 cut(s) | 125, 281, 470 |
| AvaII | GGWCC | 3 cut(s) | 267, 1111, 1419 |
| AxyI | CCTNAGG | 1 cut(s) | 185 |
| BalI | TGGCCA | 1 cut(s) | 962 |
| BanI | GGYRCC | 2 cut(s) | 1184, 1437 |
| BanII | GRGCYC | 3 cut(s) | 132, 354, 1316 |
| Bbv12I | GWGCWC | 3 cut(s) | 132, 354, 1316 |
| BbvI | GCAGC | 1 cut(s) | 431 |
| BceAI | ACGGC | 5 cut(s) | 22, 229, 384, 533, 895 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1625, 1659 |
| BciT130I | CCWGG | 2 cut(s) | 265, 1470 |
| BcnI | CCSGG | 1 cut(s) | 835 |
| BcoDI | GTCTC | 2 cut(s) | 1479, 1536 |
| BfaI | CTAG | 1 cut(s) | 1025 |
| BisI | GCNGC | 4 cut(s) | 343, 445, 448, 841 |
| BlsI | GCNGC | 4 cut(s) | 344, 446, 449, 842 |
| Bme1390I | CCNGG | 3 cut(s) | 265, 835, 1470 |
| Bme18I | GGWCC | 3 cut(s) | 267, 1111, 1419 |
| BmeT110I | CYCGRG | 3 cut(s) | 125, 281, 470 |
| BmgBI | CACGTC | 2 cut(s) | 490, 511 |
| BmgT120I | GGNCC | 3 cut(s) | 267, 1111, 1419 |
| BmiI | GGNNCC | 6 cut(s) | 269, 674, 951, 970, 1186, 1439 |
| BmrFI | CCNGG | 3 cut(s) | 265, 835, 1470 |
| BmrI | ACTGGG | 1 cut(s) | 1183 |
| BmsI | GCATC | 4 cut(s) | 456, 656, 939, 1078 |
| BmuI | ACTGGG | 1 cut(s) | 1183 |
| BpmI | CTGGAG | 2 cut(s) | 767, 1034 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1415 |
| Bpu14I | TTCGAA | 1 cut(s) | 406 |
| BpuMI | CCSGG | 1 cut(s) | 835 |
| BsaAI | YACGTR | 1 cut(s) | 757 |
| BsaHI | GRCGYC | 1 cut(s) | 1004 |
| BsaI | GGTCTC | 1 cut(s) | 1479 |
| BsaJI | CCNNGG | 4 cut(s) | 263, 705, 722, 1469 |
| BsaWI | WCCGGW | 4 cut(s) | 318, 714, 923, 952 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 570, 706, 1428, 1708 |
| Bse118I | RCCGGY | 5 cut(s) | 230, 497, 622, 923, 952 |
| Bse1I | ACTGG | 4 cut(s) | 750, 911, 1189, 1263 |
| Bse21I | CCTNAGG | 1 cut(s) | 185 |
| Bse3DI | GCAATG | 1 cut(s) | 850 |
| BseAI | TCCGGA | 1 cut(s) | 714 |
| BseBI | CCWGG | 2 cut(s) | 265, 1470 |
| BseDI | CCNNGG | 4 cut(s) | 263, 705, 722, 1469 |
| BseGI | GGATG | 6 cut(s) | 136, 164, 671, 1093, 1256, 1593 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 570, 706, 1428, 1708 |
| BseMI | GCAATG | 1 cut(s) | 850 |
| BseMII | CTCAG | 2 cut(s) | 199, 1623 |
| BseNI | ACTGG | 4 cut(s) | 750, 911, 1189, 1263 |
| BsePI | GCGCGC | 1 cut(s) | 440 |
| BseRI | GAGGAG | 5 cut(s) | 5, 344, 418, 425, 1447 |
| BseX3I | CGGCCG | 2 cut(s) | 369, 624 |
| BseXI | GCAGC | 1 cut(s) | 431 |
| BseYI | CCCAGC | 2 cut(s) | 43, 1293 |
| Bsh1236I | CGCG | 5 cut(s) | 291, 347, 440, 442, 840 |
| Bsh1285I | CGRYCG | 4 cut(s) | 319, 372, 627, 834 |
| BshFI | GGCC | 7 cut(s) | 135, 279, 371, 626, 962, 1136, 1370 |
| BshNI | GGYRCC | 2 cut(s) | 1184, 1437 |
| BshTI | ACCGGT | 2 cut(s) | 923, 952 |
| BsiEI | CGRYCG | 4 cut(s) | 319, 372, 627, 834 |
| BsiHKAI | GWGCWC | 3 cut(s) | 132, 354, 1316 |
| BsiHKCI | CYCGRG | 3 cut(s) | 125, 281, 470 |
| BsiSI | CCGG | 8 cut(s) | 231, 319, 498, 623, 715, 834, 924, 953 |
| BsiWI | CGTACG | 1 cut(s) | 987 |
| BslFI | GGGAC | 3 cut(s) | 97, 253, 1351 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 570, 706, 1428, 1708 |
| BsmAI | GTCTC | 2 cut(s) | 1479, 1536 |
| BsmFI | GGGAC | 3 cut(s) | 97, 253, 1351 |
| BsmI | GAATGC | 1 cut(s) | 1513 |
| BsnI | GGCC | 7 cut(s) | 135, 279, 371, 626, 962, 1136, 1370 |
| Bso31I | GGTCTC | 1 cut(s) | 1479 |
| BsoBI | CYCGRG | 3 cut(s) | 125, 281, 470 |
| Bsp119I | TTCGAA | 1 cut(s) | 406 |
| Bsp1286I | GDGCHC | 3 cut(s) | 132, 354, 1316 |
| Bsp13I | TCCGGA | 1 cut(s) | 714 |
| Bsp143I | GATC | 5 cut(s) | 67, 151, 633, 1218, 1600 |
| BspACI | CCGC | 9 cut(s) | 242, 342, 347, 358, 448, 797, 840, 1297, 1406 |
| BspANI | GGCC | 7 cut(s) | 135, 279, 371, 626, 962, 1136, 1370 |
| BspCNI | CTCAG | 2 cut(s) | 198, 1624 |
| BspEI | TCCGGA | 1 cut(s) | 714 |
| BspFNI | CGCG | 5 cut(s) | 291, 347, 440, 442, 840 |
| BspHI | TCATGA | 1 cut(s) | 1742 |
| BspLI | GGNNCC | 6 cut(s) | 269, 674, 951, 970, 1186, 1439 |
| BspPI | GGATC | 1 cut(s) | 1608 |
| BspQI | GCTCTTC | 1 cut(s) | 1523 |
| BspT104I | TTCGAA | 1 cut(s) | 406 |
| BspT107I | GGYRCC | 2 cut(s) | 1184, 1437 |
| BspTNI | GGTCTC | 1 cut(s) | 1479 |
| BsrDI | GCAATG | 1 cut(s) | 850 |
| BsrFI | RCCGGY | 5 cut(s) | 230, 497, 622, 923, 952 |
| BsrI | ACTGG | 4 cut(s) | 750, 911, 1189, 1263 |
| BssAI | RCCGGY | 5 cut(s) | 230, 497, 622, 923, 952 |
| BssECI | CCNNGG | 4 cut(s) | 263, 705, 722, 1469 |
| BssHII | GCGCGC | 1 cut(s) | 440 |
| BssMI | GATC | 5 cut(s) | 67, 151, 633, 1218, 1600 |
| BssNI | GRCGYC | 1 cut(s) | 1004 |
| BssT1I | CCWWGG | 1 cut(s) | 705 |
| Bst2UI | CCWGG | 2 cut(s) | 265, 1470 |
| Bst4CI | ACNGT | 6 cut(s) | 147, 610, 874, 1568, 1652, 1681 |
| Bst6I | CTCTTC | 1 cut(s) | 1523 |
| BstACI | GRCGYC | 1 cut(s) | 1004 |
| BstBAI | YACGTR | 1 cut(s) | 757 |
| BstBI | TTCGAA | 1 cut(s) | 406 |
| BstC8I | GCNNGC | 3 cut(s) | 308, 442, 1535 |
| BstDEI | CTNAG | 4 cut(s) | 185, 826, 1415, 1632 |
| BstDSI | CCRYGG | 1 cut(s) | 722 |
| BstF5I | GGATG | 6 cut(s) | 136, 164, 671, 1093, 1256, 1593 |
| BstFNI | CGCG | 5 cut(s) | 291, 347, 440, 442, 840 |
| BstHHI | GCGC | 5 cut(s) | 293, 347, 442, 444, 840 |
| BstKTI | GATC | 5 cut(s) | 70, 154, 636, 1221, 1603 |
| BstMAI | GTCTC | 2 cut(s) | 1479, 1536 |
| BstMBI | GATC | 5 cut(s) | 67, 151, 633, 1218, 1600 |
| BstMCI | CGRYCG | 4 cut(s) | 319, 372, 627, 834 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 297, 968 |
| BstNI | CCWGG | 2 cut(s) | 265, 1470 |
| BstNSI | RCATGY | 1 cut(s) | 1510 |
| BstSCI | CCNGG | 3 cut(s) | 263, 833, 1468 |
| BstUI | CGCG | 5 cut(s) | 291, 347, 440, 442, 840 |
| BstV1I | GCAGC | 1 cut(s) | 431 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 264 |
| BstZI | CGGCCG | 2 cut(s) | 369, 624 |
| Bsu36I | CCTNAGG | 1 cut(s) | 185 |
| BsuRI | GGCC | 7 cut(s) | 135, 279, 371, 626, 962, 1136, 1370 |
| BtgI | CCRYGG | 1 cut(s) | 722 |
| BtrI | CACGTC | 2 cut(s) | 490, 511 |
| BtsCI | GGATG | 6 cut(s) | 136, 164, 671, 1093, 1256, 1593 |
| BtsI | GCAGTG | 2 cut(s) | 1243, 1455 |
| BtsIMutI | CAGTG | 4 cut(s) | 918, 1243, 1455, 1657 |
| Cac8I | GCNNGC | 3 cut(s) | 308, 442, 1535 |
| CciI | TCATGA | 1 cut(s) | 1742 |
| CfoI | GCGC | 5 cut(s) | 293, 347, 442, 444, 840 |
| Cfr10I | RCCGGY | 5 cut(s) | 230, 497, 622, 923, 952 |
| Cfr13I | GGNCC | 3 cut(s) | 267, 1111, 1419 |
| CseI | GACGC | 1 cut(s) | 1012 |
| CspAI | ACCGGT | 2 cut(s) | 923, 952 |
| CviAII | CATG | 5 cut(s) | 208, 1507, 1519, 1538, 1743 |
| DdeI | CTNAG | 4 cut(s) | 185, 826, 1415, 1632 |
| DpnI | GATC | 5 cut(s) | 69, 153, 635, 1220, 1602 |
| DpnII | GATC | 5 cut(s) | 67, 151, 633, 1218, 1600 |
| DraI | TTTAAA | 1 cut(s) | 1195 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 323 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 323 |
| EaeI | YGGCCR | 4 cut(s) | 133, 369, 624, 960 |
| EagI | CGGCCG | 2 cut(s) | 369, 624 |
| Eam1104I | CTCTTC | 1 cut(s) | 1523 |
| EarI | CTCTTC | 1 cut(s) | 1523 |
| Ecl136II | GAGCTC | 3 cut(s) | 130, 352, 1314 |
| EclXI | CGGCCG | 2 cut(s) | 369, 624 |
| Eco130I | CCWWGG | 1 cut(s) | 705 |
| Eco24I | GRGCYC | 3 cut(s) | 132, 354, 1316 |
| Eco31I | GGTCTC | 1 cut(s) | 1479 |
| Eco32I | GATATC | 1 cut(s) | 645 |
| Eco47I | GGWCC | 3 cut(s) | 267, 1111, 1419 |
| Eco52I | CGGCCG | 2 cut(s) | 369, 624 |
| Eco53kI | GAGCTC | 3 cut(s) | 130, 352, 1314 |
| Eco81I | CCTNAGG | 1 cut(s) | 185 |
| Eco88I | CYCGRG | 3 cut(s) | 125, 281, 470 |
| EcoICRI | GAGCTC | 3 cut(s) | 130, 352, 1314 |
| EcoRII | CCWGG | 2 cut(s) | 263, 1468 |
| EcoRV | GATATC | 1 cut(s) | 645 |
| EcoT14I | CCWWGG | 1 cut(s) | 705 |
| EcoT38I | GRGCYC | 3 cut(s) | 132, 354, 1316 |
| ErhI | CCWWGG | 1 cut(s) | 705 |
| FaeI | CATG | 5 cut(s) | 211, 1510, 1522, 1541, 1746 |
| FaqI | GGGAC | 3 cut(s) | 97, 253, 1351 |
| FatI | CATG | 5 cut(s) | 207, 1506, 1518, 1537, 1742 |
| FauI | CCCGC | 2 cut(s) | 249, 804 |
| FblI | GTMKAC | 2 cut(s) | 492, 876 |
| Fnu4HI | GCNGC | 4 cut(s) | 343, 445, 448, 841 |
| FokI | GGATG | 6 cut(s) | 123, 151, 678, 1100, 1263, 1600 |
| FriOI | GRGCYC | 3 cut(s) | 132, 354, 1316 |
| Fsp4HI | GCNGC | 4 cut(s) | 343, 445, 448, 841 |
| FspBI | CTAG | 1 cut(s) | 1025 |
| GlaI | GCGC | 5 cut(s) | 292, 346, 441, 443, 839 |
| GluI | GCNGC | 4 cut(s) | 343, 445, 448, 841 |
| GsaI | CCCAGC | 2 cut(s) | 47, 1297 |
| GsuI | CTGGAG | 2 cut(s) | 767, 1034 |
| HaeIII | GGCC | 7 cut(s) | 135, 279, 371, 626, 962, 1136, 1370 |
| HapII | CCGG | 8 cut(s) | 231, 319, 498, 623, 715, 834, 924, 953 |
| HgaI | GACGC | 1 cut(s) | 1012 |
| HhaI | GCGC | 5 cut(s) | 293, 347, 442, 444, 840 |
| Hin1I | GRCGYC | 1 cut(s) | 1004 |
| Hin1II | CATG | 5 cut(s) | 211, 1510, 1522, 1541, 1746 |
| Hin6I | GCGC | 5 cut(s) | 291, 345, 440, 442, 838 |
| HinP1I | GCGC | 5 cut(s) | 291, 345, 440, 442, 838 |
| HincII | GTYRAC | 2 cut(s) | 484, 877 |
| HindII | GTYRAC | 2 cut(s) | 484, 877 |
| HindIII | AAGCTT | 1 cut(s) | 1019 |
| HpaII | CCGG | 8 cut(s) | 231, 319, 498, 623, 715, 834, 924, 953 |
| HphI | GGTGA | 7 cut(s) | 42, 409, 913, 1141, 1363, 1606, 1667 |
| Hpy166II | GTNNAC | 5 cut(s) | 484, 493, 505, 877, 921 |
| Hpy188I | TCNGA | 8 cut(s) | 102, 250, 649, 677, 694, 898, 968, 1223 |
| Hpy8I | GTNNAC | 5 cut(s) | 484, 493, 505, 877, 921 |
| Hpy99I | CGWCG | 6 cut(s) | 482, 515, 548, 738, 779, 881 |
| HpyCH4III | ACNGT | 6 cut(s) | 147, 610, 874, 1568, 1652, 1681 |
| HpyCH4IV | ACGT | 5 cut(s) | 477, 489, 510, 543, 756 |
| HpyCH4V | TGCA | 4 cut(s) | 300, 1099, 1537, 1625 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 297, 968 |
| HpyF3I | CTNAG | 4 cut(s) | 185, 826, 1415, 1632 |
| HpySE526I | ACGT | 5 cut(s) | 477, 489, 510, 543, 756 |
| Hsp92I | GRCGYC | 1 cut(s) | 1004 |
| Hsp92II | CATG | 5 cut(s) | 211, 1510, 1522, 1541, 1746 |
| HspAI | GCGC | 5 cut(s) | 291, 345, 440, 442, 838 |
| Kpn2I | TCCGGA | 1 cut(s) | 714 |
| KpnI | GGTACC | 2 cut(s) | 1188, 1441 |
| Kzo9I | GATC | 5 cut(s) | 67, 151, 633, 1218, 1600 |
| LguI | GCTCTTC | 1 cut(s) | 1523 |
| LmnI | GCTCC | 6 cut(s) | 176, 349, 357, 748, 848, 968 |
| Lsp1109I | GCAGC | 1 cut(s) | 431 |
| LweI | GCATC | 4 cut(s) | 456, 656, 939, 1078 |
| MaeI | CTAG | 1 cut(s) | 1025 |
| MaeII | ACGT | 5 cut(s) | 477, 489, 510, 543, 756 |
| MaeIII | GTNAC | 4 cut(s) | 550, 868, 1498, 1646 |
| MalI | GATC | 5 cut(s) | 69, 153, 635, 1220, 1602 |
| MboI | GATC | 5 cut(s) | 67, 151, 633, 1218, 1600 |
| MboII | GAAGA | 4 cut(s) | 25, 89, 385, 1540 |
| MhlI | GDGCHC | 3 cut(s) | 132, 354, 1316 |
| MlsI | TGGCCA | 1 cut(s) | 962 |
| MluCI | AATT | 7 cut(s) | 598, 802, 998, 1050, 1093, 1303, 1346 |
| MluNI | TGGCCA | 1 cut(s) | 962 |
| MlyI | GAGTC | 3 cut(s) | 189, 732, 1561 |
| MmeI | TCCRAC | 2 cut(s) | 816, 1089 |
| Mox20I | TGGCCA | 1 cut(s) | 962 |
| MroI | TCCGGA | 1 cut(s) | 714 |
| MscI | TGGCCA | 1 cut(s) | 962 |
| MseI | TTAA | 3 cut(s) | 558, 1194, 1257 |
| MslI | CAYNNNNRTG | 3 cut(s) | 464, 1490, 1505 |
| Msp20I | TGGCCA | 1 cut(s) | 962 |
| MspA1I | CMGCKG | 2 cut(s) | 157, 1297 |
| MspI | CCGG | 8 cut(s) | 231, 319, 498, 623, 715, 834, 924, 953 |
| MspR9I | CCNGG | 3 cut(s) | 265, 835, 1470 |
| MssI | GTTTAAAC | 1 cut(s) | 1195 |
| Mva1269I | GAATGC | 1 cut(s) | 1513 |
| MvaI | CCWGG | 2 cut(s) | 265, 1470 |
| MvnI | CGCG | 5 cut(s) | 291, 347, 440, 442, 840 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 297, 968 |
| NciI | CCSGG | 1 cut(s) | 835 |
| NdeII | GATC | 5 cut(s) | 67, 151, 633, 1218, 1600 |
| NlaIII | CATG | 5 cut(s) | 211, 1510, 1522, 1541, 1746 |
| NlaIV | GGNNCC | 6 cut(s) | 269, 674, 951, 970, 1186, 1439 |
| NmeAIII | GCCGAG | 2 cut(s) | 111, 397 |
| NmuCI | GTSAC | 2 cut(s) | 868, 1498 |
| NspI | RCATGY | 1 cut(s) | 1510 |
| NspV | TTCGAA | 1 cut(s) | 406 |
| OliI | CACNNNNGTG | 1 cut(s) | 1490 |
| PaeR7I | CTCGAG | 3 cut(s) | 125, 281, 470 |
| PagI | TCATGA | 1 cut(s) | 1742 |
| PauI | GCGCGC | 1 cut(s) | 440 |
| PciI | ACATGT | 1 cut(s) | 1506 |
| PciSI | GCTCTTC | 1 cut(s) | 1523 |
| PcsI | WCGNNNNNNNCGW | 8 cut(s) | 374, 477, 486, 624, 730, 774, 873, 972 |
| PctI | GAATGC | 1 cut(s) | 1513 |
| PfeI | GAWTC | 8 cut(s) | 390, 678, 689, 718, 1177, 1318, 1323, 1574 |
| Pfl23II | CGTACG | 1 cut(s) | 987 |
| PflFI | GACNNNGTC | 1 cut(s) | 488 |
| PinAI | ACCGGT | 2 cut(s) | 923, 952 |
| PkrI | GCNGC | 4 cut(s) | 344, 446, 449, 842 |
| PleI | GAGTC | 3 cut(s) | 188, 732, 1560 |
| PmeI | GTTTAAAC | 1 cut(s) | 1195 |
| PpsI | GAGTC | 3 cut(s) | 188, 732, 1560 |
| Ppu21I | YACGTR | 1 cut(s) | 757 |
| PscI | ACATGT | 1 cut(s) | 1506 |
| PsiI | TTATAA | 2 cut(s) | 1344, 1563 |
| Psp124BI | GAGCTC | 3 cut(s) | 132, 354, 1316 |
| Psp6I | CCWGG | 2 cut(s) | 263, 1468 |
| PspFI | CCCAGC | 2 cut(s) | 43, 1293 |
| PspGI | CCWGG | 2 cut(s) | 263, 1468 |
| PspLI | CGTACG | 1 cut(s) | 987 |
| PspN4I | GGNNCC | 6 cut(s) | 269, 674, 951, 970, 1186, 1439 |
| PspPI | GGNCC | 3 cut(s) | 267, 1111, 1419 |
| PspXI | VCTCGAGB | 2 cut(s) | 125, 281 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 1612, 1644, 1669, 1701 |
| PsyI | GACNNNGTC | 1 cut(s) | 488 |
| PteI | GCGCGC | 1 cut(s) | 440 |
| PvuII | CAGCTG | 1 cut(s) | 157 |
| RseI | CAYNNNNRTG | 3 cut(s) | 464, 1490, 1505 |
| SacI | GAGCTC | 3 cut(s) | 132, 354, 1316 |
| SalI | GTCGAC | 1 cut(s) | 875 |
| SapI | GCTCTTC | 1 cut(s) | 1523 |
| SaqAI | TTAA | 3 cut(s) | 558, 1194, 1257 |
| SatI | GCNGC | 4 cut(s) | 343, 445, 448, 841 |
| Sau3AI | GATC | 5 cut(s) | 67, 151, 633, 1218, 1600 |
| Sau96I | GGNCC | 3 cut(s) | 267, 1111, 1419 |
| SchI | GAGTC | 3 cut(s) | 189, 732, 1561 |
| ScrFI | CCNGG | 3 cut(s) | 265, 835, 1470 |
| SduI | GDGCHC | 3 cut(s) | 132, 354, 1316 |
| SfaNI | GCATC | 4 cut(s) | 456, 656, 939, 1078 |
| Sfr274I | CTCGAG | 3 cut(s) | 125, 281, 470 |
| SfuI | TTCGAA | 1 cut(s) | 406 |
| SgrAI | CRCCGGYG | 2 cut(s) | 497, 923 |
| SinI | GGWCC | 3 cut(s) | 267, 1111, 1419 |
| SlaI | CTCGAG | 3 cut(s) | 125, 281, 470 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 464, 1490, 1505 |
| SmlI | CTYRAG | 3 cut(s) | 125, 281, 470 |
| SmoI | CTYRAG | 3 cut(s) | 125, 281, 470 |
| Sse9I | AATT | 7 cut(s) | 598, 802, 998, 1050, 1093, 1303, 1346 |
| SsiI | CCGC | 9 cut(s) | 242, 342, 347, 358, 448, 797, 840, 1297, 1406 |
| SspMI | CTAG | 1 cut(s) | 1025 |
| SstI | GAGCTC | 3 cut(s) | 132, 354, 1316 |
| StyD4I | CCNGG | 3 cut(s) | 263, 833, 1468 |
| StyI | CCWWGG | 1 cut(s) | 705 |
| TaaI | ACNGT | 6 cut(s) | 147, 610, 874, 1568, 1652, 1681 |
| TaiI | ACGT | 5 cut(s) | 480, 492, 513, 546, 759 |
| TasI | AATT | 7 cut(s) | 598, 802, 998, 1050, 1093, 1303, 1346 |
| TauI | GCSGC | 3 cut(s) | 345, 450, 843 |
| TfiI | GAWTC | 8 cut(s) | 390, 678, 689, 718, 1177, 1318, 1323, 1574 |
| Tru1I | TTAA | 3 cut(s) | 558, 1194, 1257 |
| Tru9I | TTAA | 3 cut(s) | 558, 1194, 1257 |
| TscAI | CASTG | 4 cut(s) | 918, 1243, 1462, 1657 |
| TseFI | GTSAC | 2 cut(s) | 868, 1498 |
| TseI | GCWGC | 1 cut(s) | 444 |
| Tsp45I | GTSAC | 2 cut(s) | 868, 1498 |
| TspDTI | ATGAA | 3 cut(s) | 224, 1062, 1535 |
| TspGWI | ACGGA | 3 cut(s) | 669, 739, 1715 |
| TspRI | CASTG | 4 cut(s) | 918, 1243, 1462, 1657 |
| Tth111I | GACNNNGTC | 1 cut(s) | 488 |
| VpaK11BI | GGWCC | 3 cut(s) | 267, 1111, 1419 |
| XapI | RAATTY | 2 cut(s) | 598, 802 |
| XbaI | TCTAGA | 1 cut(s) | 1024 |
| XceI | RCATGY | 1 cut(s) | 1510 |
| XhoI | CTCGAG | 3 cut(s) | 125, 281, 470 |
| XmiI | GTMKAC | 2 cut(s) | 492, 876 |
| XspI | CTAG | 1 cut(s) | 1025 |