amidase A
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G05480 |
| fragaria_vesca | FvH4_7g24990 |
| prunus_persica | Prupe.2G255000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0370891 |
| rosa_laevigata | RLG00000027001 |
| rosa_multiflora | Rmu_co8367915.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00286150 |
| rosa_rugosa | Rorug01G0360200 |
| rosa_samantha | Rh1AG370000 Rh1BG333600 Rh1CG346900 Rh1DG364800 |
| rosa_wichuraiana | Rw1G032560 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1395 |
| AccB1I | GGYRCC | 2 cut(s) | 928, 1395 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 916 |
| AccI | GTMKAC | 1 cut(s) | 903 |
| AccII | CGCG | 4 cut(s) | 183, 309, 507, 1633 |
| AclWI | GGATC | 8 cut(s) | 586, 638, 729, 928, 965, 1080, 1184, 1566 |
| AcoI | YGGCCR | 2 cut(s) | 135, 907 |
| AcsI | RAATTY | 1 cut(s) | 1029 |
| AcyI | GRCGYC | 1 cut(s) | 105 |
| AdeI | CACNNNGTG | 1 cut(s) | 764 |
| AfaI | GTAC | 7 cut(s) | 5, 332, 379, 815, 1259, 1301, 1397 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 101, 282, 351, 532, 571, 916 |
| AflIII | ACRYGT | 1 cut(s) | 763 |
| AgsI | TTSAA | 5 cut(s) | 613, 1130, 1153, 1529, 1536 |
| AjiI | CACGTC | 3 cut(s) | 292, 529, 764 |
| AjnI | CCWGG | 1 cut(s) | 1426 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1021, 1053 |
| AleI | CACNNNNGTG | 1 cut(s) | 1448 |
| Alw21I | GWGCWC | 5 cut(s) | 134, 372, 780, 1226, 1455 |
| AlwI | GGATC | 8 cut(s) | 586, 638, 729, 928, 965, 1080, 1184, 1566 |
| Ama87I | CYCGRG | 2 cut(s) | 299, 488 |
| AoxI | GGCC | 4 cut(s) | 7, 135, 217, 907 |
| ApeKI | GCWGC | 4 cut(s) | 462, 1269, 1623, 1656 |
| ApoI | RAATTY | 1 cut(s) | 1029 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 981 |
| Asp718I | GGTACC | 1 cut(s) | 1395 |
| AspA2I | CCTAGG | 1 cut(s) | 578 |
| AspLEI | GCGC | 3 cut(s) | 311, 1635, 1646 |
| AspS9I | GGNCC | 3 cut(s) | 78, 218, 285 |
| AsuC2I | CCSGG | 2 cut(s) | 76, 346 |
| AsuHPI | GGTGA | 8 cut(s) | 78, 181, 469, 505, 940, 1321, 1450, 1489 |
| AvaI | CYCGRG | 2 cut(s) | 299, 488 |
| AvaII | GGWCC | 2 cut(s) | 78, 285 |
| AvrII | CCTAGG | 1 cut(s) | 578 |
| BanI | GGYRCC | 2 cut(s) | 928, 1395 |
| BanII | GRGCYC | 4 cut(s) | 134, 372, 780, 1226 |
| BbsI | GAAGAC | 1 cut(s) | 502 |
| Bbv12I | GWGCWC | 5 cut(s) | 134, 372, 780, 1226, 1455 |
| BbvI | GCAGC | 4 cut(s) | 449, 1281, 1610, 1668 |
| BccI | CCATC | 4 cut(s) | 218, 1019, 1540, 1646 |
| BceAI | ACGGC | 9 cut(s) | 22, 122, 133, 232, 697, 811, 916, 922, 1497 |
| BciT130I | CCWGG | 1 cut(s) | 1428 |
| BclI | TGATCA | 1 cut(s) | 1662 |
| BcnI | CCSGG | 2 cut(s) | 76, 346 |
| BfaI | CTAG | 2 cut(s) | 455, 579 |
| BfoI | RGCGCY | 1 cut(s) | 1647 |
| BlnI | CCTAGG | 1 cut(s) | 578 |
| Bme1390I | CCNGG | 3 cut(s) | 76, 346, 1428 |
| Bme18I | GGWCC | 2 cut(s) | 78, 285 |
| BmeT110I | CYCGRG | 2 cut(s) | 299, 488 |
| BmgBI | CACGTC | 3 cut(s) | 292, 529, 764 |
| BmgT120I | GGNCC | 3 cut(s) | 78, 218, 285 |
| BmiI | GGNNCC | 6 cut(s) | 287, 576, 648, 930, 978, 1397 |
| BmrFI | CCNGG | 3 cut(s) | 76, 346, 1428 |
| BmsI | GCATC | 3 cut(s) | 59, 348, 474 |
| BpiI | GAAGAC | 1 cut(s) | 502 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1225 |
| BpuEI | CTTGAG | 1 cut(s) | 794 |
| BpuMI | CCSGG | 2 cut(s) | 76, 346 |
| BsaHI | GRCGYC | 1 cut(s) | 105 |
| BsaJI | CCNNGG | 4 cut(s) | 281, 578, 749, 1083 |
| BsaWI | WCCGGW | 2 cut(s) | 860, 937 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 917, 947, 1180, 1210 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 101, 282, 351, 532, 571, 916 |
| Bse118I | RCCGGY | 3 cut(s) | 515, 950, 1120 |
| Bse1I | ACTGG | 1 cut(s) | 910 |
| Bse3DI | GCAATG | 1 cut(s) | 1684 |
| BseBI | CCWGG | 1 cut(s) | 1428 |
| BseDI | CCNNGG | 4 cut(s) | 281, 578, 749, 1083 |
| BseGI | GGATG | 1 cut(s) | 1551 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 101, 282, 351, 532, 571, 916 |
| BseMI | GCAATG | 1 cut(s) | 1684 |
| BseMII | CTCAG | 4 cut(s) | 1160, 1239, 1320, 1604 |
| BseNI | ACTGG | 1 cut(s) | 910 |
| BseX3I | CGGCCG | 1 cut(s) | 135 |
| BseXI | GCAGC | 4 cut(s) | 449, 1281, 1610, 1668 |
| Bsh1236I | CGCG | 4 cut(s) | 183, 309, 507, 1633 |
| Bsh1285I | CGRYCG | 5 cut(s) | 138, 337, 399, 505, 903 |
| BshFI | GGCC | 4 cut(s) | 9, 137, 219, 909 |
| BshNI | GGYRCC | 2 cut(s) | 928, 1395 |
| BsiEI | CGRYCG | 5 cut(s) | 138, 337, 399, 505, 903 |
| BsiHKAI | GWGCWC | 5 cut(s) | 134, 372, 780, 1226, 1455 |
| BsiHKCI | CYCGRG | 2 cut(s) | 299, 488 |
| BsiSI | CCGG | 8 cut(s) | 76, 102, 345, 516, 861, 938, 951, 1121 |
| BslFI | GGGAC | 4 cut(s) | 125, 271, 548, 1309 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 101, 282, 351, 532, 571, 916 |
| BsmFI | GGGAC | 4 cut(s) | 125, 271, 548, 1309 |
| BsmI | GAATGC | 1 cut(s) | 1471 |
| BsnI | GGCC | 4 cut(s) | 9, 137, 219, 909 |
| BsoBI | CYCGRG | 2 cut(s) | 299, 488 |
| Bsp1286I | GDGCHC | 5 cut(s) | 134, 372, 780, 1226, 1455 |
| Bsp19I | CCATGG | 1 cut(s) | 281 |
| BspANI | GGCC | 4 cut(s) | 9, 137, 219, 909 |
| BspCNI | CTCAG | 4 cut(s) | 1159, 1238, 1321, 1603 |
| BspFNI | CGCG | 4 cut(s) | 183, 309, 507, 1633 |
| BspLI | GGNNCC | 6 cut(s) | 287, 576, 648, 930, 978, 1397 |
| BspPI | GGATC | 8 cut(s) | 586, 638, 729, 928, 965, 1080, 1184, 1566 |
| BspT107I | GGYRCC | 2 cut(s) | 928, 1395 |
| BsrDI | GCAATG | 1 cut(s) | 1684 |
| BsrFI | RCCGGY | 3 cut(s) | 515, 950, 1120 |
| BsrI | ACTGG | 1 cut(s) | 910 |
| BssAI | RCCGGY | 3 cut(s) | 515, 950, 1120 |
| BssECI | CCNNGG | 4 cut(s) | 281, 578, 749, 1083 |
| BssNI | GRCGYC | 1 cut(s) | 105 |
| BssT1I | CCWWGG | 3 cut(s) | 281, 578, 1083 |
| Bst2UI | CCWGG | 1 cut(s) | 1428 |
| Bst4CI | ACNGT | 3 cut(s) | 82, 617, 901 |
| BstACI | GRCGYC | 1 cut(s) | 105 |
| BstC8I | GCNNGC | 5 cut(s) | 326, 460, 651, 1122, 1493 |
| BstDEI | CTNAG | 5 cut(s) | 1146, 1225, 1329, 1373, 1590 |
| BstDSI | CCRYGG | 1 cut(s) | 281 |
| BstF5I | GGATG | 1 cut(s) | 1551 |
| BstFNI | CGCG | 4 cut(s) | 183, 309, 507, 1633 |
| BstH2I | RGCGCY | 1 cut(s) | 1647 |
| BstHHI | GCGC | 3 cut(s) | 311, 1635, 1646 |
| BstMCI | CGRYCG | 5 cut(s) | 138, 337, 399, 505, 903 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 180, 315, 1094, 1632, 1641, 1665, 1686 |
| BstNI | CCWGG | 1 cut(s) | 1428 |
| BstSCI | CCNGG | 3 cut(s) | 74, 344, 1426 |
| BstUI | CGCG | 4 cut(s) | 183, 309, 507, 1633 |
| BstV1I | GCAGC | 4 cut(s) | 449, 1281, 1610, 1668 |
| BstV2I | GAAGAC | 1 cut(s) | 502 |
| BstX2I | RGATCY | 1 cut(s) | 721 |
| BstYI | RGATCY | 1 cut(s) | 721 |
| BstZI | CGGCCG | 1 cut(s) | 135 |
| BsuRI | GGCC | 4 cut(s) | 9, 137, 219, 909 |
| BtgI | CCRYGG | 1 cut(s) | 281 |
| BtgZI | GCGATG | 1 cut(s) | 325 |
| BtrI | CACGTC | 3 cut(s) | 292, 529, 764 |
| BtsCI | GGATG | 1 cut(s) | 1551 |
| Cac8I | GCNNGC | 5 cut(s) | 326, 460, 651, 1122, 1493 |
| CfoI | GCGC | 3 cut(s) | 311, 1635, 1646 |
| Cfr10I | RCCGGY | 3 cut(s) | 515, 950, 1120 |
| Cfr13I | GGNCC | 3 cut(s) | 78, 218, 285 |
| CpoI | CGGWCCG | 1 cut(s) | 78 |
| CseI | GACGC | 3 cut(s) | 94, 172, 496 |
| CsiI | ACCWGGT | 1 cut(s) | 1426 |
| Csp6I | GTAC | 7 cut(s) | 4, 331, 378, 814, 1258, 1300, 1396 |
| CspI | CGGWCCG | 1 cut(s) | 78 |
| CviAII | CATG | 2 cut(s) | 282, 481 |
| CviQI | GTAC | 7 cut(s) | 4, 331, 378, 814, 1258, 1300, 1396 |
| DdeI | CTNAG | 5 cut(s) | 1146, 1225, 1329, 1373, 1590 |
| DraIII | CACNNNGTG | 1 cut(s) | 764 |
| EaeI | YGGCCR | 2 cut(s) | 135, 907 |
| EagI | CGGCCG | 1 cut(s) | 135 |
| EciI | GGCGGA | 5 cut(s) | 45, 220, 237, 265, 813 |
| Ecl136II | GAGCTC | 4 cut(s) | 132, 370, 778, 1224 |
| EclXI | CGGCCG | 1 cut(s) | 135 |
| Eco130I | CCWWGG | 3 cut(s) | 281, 578, 1083 |
| Eco24I | GRGCYC | 4 cut(s) | 134, 372, 780, 1226 |
| Eco47I | GGWCC | 2 cut(s) | 78, 285 |
| Eco52I | CGGCCG | 1 cut(s) | 135 |
| Eco53kI | GAGCTC | 4 cut(s) | 132, 370, 778, 1224 |
| Eco88I | CYCGRG | 2 cut(s) | 299, 488 |
| EcoICRI | GAGCTC | 4 cut(s) | 132, 370, 778, 1224 |
| EcoRII | CCWGG | 1 cut(s) | 1426 |
| EcoT14I | CCWWGG | 3 cut(s) | 281, 578, 1083 |
| EcoT38I | GRGCYC | 4 cut(s) | 134, 372, 780, 1226 |
| ErhI | CCWWGG | 3 cut(s) | 281, 578, 1083 |
| FaeI | CATG | 2 cut(s) | 285, 484 |
| FaiI | YATR | 9 cut(s) | 238, 283, 482, 835, 1002, 1036, 1077, 1449, 1691 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 395, 427 |
| FaqI | GGGAC | 4 cut(s) | 125, 271, 548, 1309 |
| FatI | CATG | 2 cut(s) | 281, 480 |
| FauI | CCCGC | 1 cut(s) | 947 |
| FbaI | TGATCA | 1 cut(s) | 1662 |
| FblI | GTMKAC | 1 cut(s) | 903 |
| FokI | GGATG | 1 cut(s) | 1558 |
| FriOI | GRGCYC | 4 cut(s) | 134, 372, 780, 1226 |
| FspBI | CTAG | 2 cut(s) | 455, 579 |
| GlaI | GCGC | 3 cut(s) | 310, 1634, 1645 |
| HaeII | RGCGCY | 1 cut(s) | 1647 |
| HaeIII | GGCC | 4 cut(s) | 9, 137, 219, 909 |
| HapII | CCGG | 8 cut(s) | 76, 102, 345, 516, 861, 938, 951, 1121 |
| HgaI | GACGC | 3 cut(s) | 94, 172, 496 |
| HhaI | GCGC | 3 cut(s) | 311, 1635, 1646 |
| Hin1I | GRCGYC | 1 cut(s) | 105 |
| Hin1II | CATG | 2 cut(s) | 285, 484 |
| Hin6I | GCGC | 3 cut(s) | 309, 1633, 1644 |
| HinP1I | GCGC | 3 cut(s) | 309, 1633, 1644 |
| HincII | GTYRAC | 2 cut(s) | 904, 1519 |
| HindII | GTYRAC | 2 cut(s) | 904, 1519 |
| HindIII | AAGCTT | 1 cut(s) | 1157 |
| HinfI | GANTC | 8 cut(s) | 260, 408, 705, 716, 820, 829, 1532, 1704 |
| HpaI | GTTAAC | 1 cut(s) | 1519 |
| HpaII | CCGG | 8 cut(s) | 76, 102, 345, 516, 861, 938, 951, 1121 |
| HphI | GGTGA | 8 cut(s) | 78, 181, 469, 505, 940, 1321, 1450, 1489 |
| Hpy166II | GTNNAC | 5 cut(s) | 523, 904, 948, 1312, 1519 |
| Hpy8I | GTNNAC | 5 cut(s) | 523, 904, 948, 1312, 1519 |
| HpyAV | CCTTC | 9 cut(s) | 81, 235, 397, 412, 738, 988, 1327, 1386, 1474 |
| HpyCH4III | ACNGT | 3 cut(s) | 82, 617, 901 |
| HpyCH4IV | ACGT | 7 cut(s) | 291, 495, 528, 561, 763, 783, 1298 |
| HpyCH4V | TGCA | 3 cut(s) | 318, 599, 1689 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 180, 315, 1094, 1632, 1641, 1665, 1686 |
| HpyF3I | CTNAG | 5 cut(s) | 1146, 1225, 1329, 1373, 1590 |
| HpySE526I | ACGT | 7 cut(s) | 291, 495, 528, 561, 763, 783, 1298 |
| Hsp92I | GRCGYC | 1 cut(s) | 105 |
| Hsp92II | CATG | 2 cut(s) | 285, 484 |
| HspAI | GCGC | 3 cut(s) | 309, 1633, 1644 |
| KpnI | GGTACC | 1 cut(s) | 1399 |
| KroI | GCCGGC | 1 cut(s) | 1120 |
| KroNI | GCCGGC | 1 cut(s) | 1122 |
| Ksp22I | TGATCA | 1 cut(s) | 1662 |
| KspAI | GTTAAC | 1 cut(s) | 1519 |
| LmnI | GCTCC | 7 cut(s) | 278, 375, 574, 646, 875, 1458, 1488 |
| Lsp1109I | GCAGC | 4 cut(s) | 449, 1281, 1610, 1668 |
| LweI | GCATC | 3 cut(s) | 59, 348, 474 |
| MabI | ACCWGGT | 1 cut(s) | 1426 |
| MaeI | CTAG | 2 cut(s) | 455, 579 |
| MaeII | ACGT | 7 cut(s) | 291, 495, 528, 561, 763, 783, 1298 |
| MaeIII | GTNAC | 6 cut(s) | 106, 895, 1018, 1196, 1465, 1604 |
| MboII | GAAGA | 7 cut(s) | 31, 403, 502, 579, 1300, 1330, 1447 |
| MflI | RGATCY | 1 cut(s) | 721 |
| MhlI | GDGCHC | 5 cut(s) | 134, 372, 780, 1226, 1455 |
| MluCI | AATT | 6 cut(s) | 623, 1011, 1029, 1304, 1377, 1672 |
| MmeI | TCCRAC | 2 cut(s) | 699, 766 |
| MroNI | GCCGGC | 1 cut(s) | 1120 |
| MroXI | GAANNNNTTC | 1 cut(s) | 981 |
| MseI | TTAA | 4 cut(s) | 1047, 1215, 1386, 1518 |
| MslI | CAYNNNNRTG | 2 cut(s) | 482, 1448 |
| MspI | CCGG | 8 cut(s) | 76, 102, 345, 516, 861, 938, 951, 1121 |
| MspR9I | CCNGG | 3 cut(s) | 76, 346, 1428 |
| Mva1269I | GAATGC | 1 cut(s) | 1471 |
| MvaI | CCWGG | 1 cut(s) | 1428 |
| MvnI | CGCG | 4 cut(s) | 183, 309, 507, 1633 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 180, 315, 1094, 1632, 1641, 1665, 1686 |
| NaeI | GCCGGC | 1 cut(s) | 1122 |
| NciI | CCSGG | 2 cut(s) | 76, 346 |
| NcoI | CCATGG | 1 cut(s) | 281 |
| NgoMIV | GCCGGC | 1 cut(s) | 1120 |
| NlaIII | CATG | 2 cut(s) | 285, 484 |
| NlaIV | GGNNCC | 6 cut(s) | 287, 576, 648, 930, 978, 1397 |
| NmeAIII | GCCGAG | 3 cut(s) | 113, 336, 415 |
| NmuCI | GTSAC | 5 cut(s) | 106, 895, 1018, 1196, 1465 |
| OliI | CACNNNNGTG | 1 cut(s) | 1448 |
| PaeR7I | CTCGAG | 2 cut(s) | 299, 488 |
| PcsI | WCGNNNNNNNCGW | 8 cut(s) | 297, 495, 504, 757, 801, 824, 900, 929 |
| PctI | GAATGC | 1 cut(s) | 1471 |
| PdiI | GCCGGC | 1 cut(s) | 1122 |
| PdmI | GAANNNNTTC | 1 cut(s) | 981 |
| PfeI | GAWTC | 8 cut(s) | 260, 408, 705, 716, 820, 829, 1532, 1704 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 916 |
| PfoI | TCCNGGA | 1 cut(s) | 74 |
| Ple19I | CGATCG | 1 cut(s) | 505 |
| Psp124BI | GAGCTC | 4 cut(s) | 134, 372, 780, 1226 |
| Psp6I | CCWGG | 1 cut(s) | 1426 |
| PspGI | CCWGG | 1 cut(s) | 1426 |
| PspN4I | GGNNCC | 6 cut(s) | 287, 576, 648, 930, 978, 1397 |
| PspPI | GGNCC | 3 cut(s) | 78, 218, 285 |
| PspXI | VCTCGAGB | 1 cut(s) | 299 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1283, 1315 |
| PsuI | RGATCY | 1 cut(s) | 721 |
| PvuI | CGATCG | 1 cut(s) | 505 |
| RsaI | GTAC | 7 cut(s) | 5, 332, 379, 815, 1259, 1301, 1397 |
| RsaNI | GTAC | 7 cut(s) | 4, 331, 378, 814, 1258, 1300, 1396 |
| RseI | CAYNNNNRTG | 2 cut(s) | 482, 1448 |
| Rsr2I | CGGWCCG | 1 cut(s) | 78 |
| RsrII | CGGWCCG | 1 cut(s) | 78 |
| SacI | GAGCTC | 4 cut(s) | 134, 372, 780, 1226 |
| SalI | GTCGAC | 1 cut(s) | 902 |
| SaqAI | TTAA | 4 cut(s) | 1047, 1215, 1386, 1518 |
| Sau96I | GGNCC | 3 cut(s) | 78, 218, 285 |
| ScrFI | CCNGG | 3 cut(s) | 76, 346, 1428 |
| SduI | GDGCHC | 5 cut(s) | 134, 372, 780, 1226, 1455 |
| SexAI | ACCWGGT | 1 cut(s) | 1426 |
| SfaNI | GCATC | 3 cut(s) | 59, 348, 474 |
| Sfr274I | CTCGAG | 2 cut(s) | 299, 488 |
| SgrAI | CRCCGGYG | 2 cut(s) | 515, 950 |
| SinI | GGWCC | 2 cut(s) | 78, 285 |
| SlaI | CTCGAG | 2 cut(s) | 299, 488 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 482, 1448 |
| SmlI | CTYRAG | 3 cut(s) | 299, 488, 773 |
| SmoI | CTYRAG | 3 cut(s) | 299, 488, 773 |
| Sse9I | AATT | 6 cut(s) | 623, 1011, 1029, 1304, 1377, 1672 |
| SspMI | CTAG | 2 cut(s) | 455, 579 |
| SstI | GAGCTC | 4 cut(s) | 134, 372, 780, 1226 |
| StyD4I | CCNGG | 3 cut(s) | 74, 344, 1426 |
| StyI | CCWWGG | 3 cut(s) | 281, 578, 1083 |
| TaaI | ACNGT | 3 cut(s) | 82, 617, 901 |
| TaiI | ACGT | 7 cut(s) | 294, 498, 531, 564, 766, 786, 1301 |
| TaqII | GACCGA | 2 cut(s) | 413, 1037 |
| TasI | AATT | 6 cut(s) | 623, 1011, 1029, 1304, 1377, 1672 |
| TatI | WGTACW | 1 cut(s) | 1257 |
| TauI | GCSGC | 6 cut(s) | 47, 50, 183, 253, 363, 1700 |
| TfiI | GAWTC | 8 cut(s) | 260, 408, 705, 716, 820, 829, 1532, 1704 |
| Tru1I | TTAA | 4 cut(s) | 1047, 1215, 1386, 1518 |
| Tru9I | TTAA | 4 cut(s) | 1047, 1215, 1386, 1518 |
| TseFI | GTSAC | 5 cut(s) | 106, 895, 1018, 1196, 1465 |
| TseI | GCWGC | 4 cut(s) | 462, 1269, 1623, 1656 |
| Tsp45I | GTSAC | 5 cut(s) | 106, 895, 1018, 1196, 1465 |
| TspDTI | ATGAA | 3 cut(s) | 527, 1023, 1673 |
| TspGWI | ACGGA | 4 cut(s) | 256, 365, 439, 954 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 916 |
| VpaK11BI | GGWCC | 2 cut(s) | 78, 285 |
| XapI | RAATTY | 1 cut(s) | 1029 |
| XhoI | CTCGAG | 2 cut(s) | 299, 488 |
| XmaJI | CCTAGG | 1 cut(s) | 578 |
| XmiI | GTMKAC | 1 cut(s) | 903 |
| XmnI | GAANNNNTTC | 1 cut(s) | 981 |
| XspI | CTAG | 2 cut(s) | 455, 579 |