Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0014474

Physical Location & Seq

Genomic Coordinates Forward (+)

27198924 .. 27200540

Gene Structure 1617 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G264500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 480 bp

ATGGAGGCTTCTTCGGCTTCATCTTCATCTTCATCTTCATCTTCAAAGGGTTTCATGGAAAATGTGGAGCAACCCCATGTTTTGGCTGTTGACGACAGTATCATTGATCGCAAACTAATCGAAAAGCTACTCAAAAATCTGTCTTGCAAAGTGACTACTGCAGAGAATGGGCTAAGGGCGTTGGAGTTTTTGGGCTTGGGAGATCATCAAAACAGTAGCTTGGAGGGCAATATCTCAAAGGTGAATCTGGTAATTACAGATTATTGTATGCCAGGGATGACAGGCTATGAACTACTCAAGAAAATCAAGGAATCATCACTCATGAAGGAGGTTCCAGTGGTGATTATGTCATCTGAATACGTACCGAATCGTATTAACAAGTGCTTAGAGGAGGGAGCTCAGATGTTCATGCTAAAGCCTCTCAGACAGTCGGACATAAAGAAATTGAGATGCCATTTGATGAAATTGGAAAGAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009889 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035556 GO:0042221 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080090 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

Response_reg

Protein Analysis

160

Amino Acids

17.71

Weight (kDa)

7.65

Isoelectric Point (pI)

50.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Image

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Publication-ready

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Orthologous Genes (Group: OG0014474)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G56380 AT3G56380
fragaria_vesca	FvH4_7g25970
malus_domestica	MD01G1168100.v1.1 MD07G1234100.v1.1
prunus_persica	Prupe.2G264500_v2.0.a1
pyrus_communis	pycom01g18110 pycom07g21190
rosa_chinensis	RchiOBHm_Chr1g0372351
rosa_laevigata	RLG00000026905
rosa_roxburghii	Rroxscaffold_4G00285020
rosa_rugosa	Rorug01G0371300 Rorug01G0371300
rosa_samantha	Rh1AG379800 Rh1BG343300 Rh1CG356800
rosa_wichuraiana	Rw1G033390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	82
AfaI	GTAC	1 cut(s)	363
AfiI	CCNNNNNNNGG	1 cut(s)	82
AgsI	TTSAA	1 cut(s)	45
AjnI	CCWGG	1 cut(s)	271
AluBI	AGCT	3 cut(s)	127, 219, 398
AluI	AGCT	3 cut(s)	127, 219, 398
Alw21I	GWGCWC	1 cut(s)	400
AsuHPI	GGTGA	2 cut(s)	253, 352
BaeI	ACNNNNGTAYC	2 cut(s)	82, 115
BanII	GRGCYC	1 cut(s)	400
Bbv12I	GWGCWC	1 cut(s)	400
BcgI	CGANNNNNNTGC	2 cut(s)	100, 134
BciT130I	CCWGG	1 cut(s)	273
BfmI	CTRYAG	1 cut(s)	159
Bme1390I	CCNGG	1 cut(s)	273
BmiI	GGNNCC	1 cut(s)	333
BmrFI	CCNGG	1 cut(s)	273
BmsI	GCATC	1 cut(s)	440
Bpu10I	CCTNAGC	1 cut(s)	173
BpuEI	CTTGAG	1 cut(s)	281
BsaAI	YACGTR	1 cut(s)	361
BsaJI	CCNNGG	1 cut(s)	272
Bsc4I	CCNNNNNNNGG	1 cut(s)	82
Bse1I	ACTGG	1 cut(s)	335
BseBI	CCWGG	1 cut(s)	273
BseDI	CCNNGG	1 cut(s)	272
BseGI	GGATG	1 cut(s)	282
BseLI	CCNNNNNNNGG	1 cut(s)	82
BseMII	CTCAG	2 cut(s)	413, 436
BseNI	ACTGG	1 cut(s)	335
BseRI	GAGGAG	1 cut(s)	404
BsiHKAI	GWGCWC	1 cut(s)	400
BslI	CCNNNNNNNGG	1 cut(s)	82
Bsp1286I	GDGCHC	1 cut(s)	400
Bsp143I	GATC	2 cut(s)	106, 202
BspCNI	CTCAG	2 cut(s)	412, 435
BspHI	TCATGA	1 cut(s)	321
BspLI	GGNNCC	1 cut(s)	333
BspMAI	CTGCAG	1 cut(s)	163
BsrI	ACTGG	1 cut(s)	335
BssECI	CCNNGG	1 cut(s)	272
BssMI	GATC	2 cut(s)	106, 202
Bst2UI	CCWGG	1 cut(s)	273
Bst4CI	ACNGT	3 cut(s)	98, 215, 429
BstBAI	YACGTR	1 cut(s)	361
BstDEI	CTNAG	4 cut(s)	173, 385, 399, 422
BstF5I	GGATG	1 cut(s)	282
BstKTI	GATC	2 cut(s)	109, 205
BstMBI	GATC	2 cut(s)	106, 202
BstMWI	GCNNNNNNNGC	2 cut(s)	14, 225
BstNI	CCWGG	1 cut(s)	273
BstSCI	CCNGG	1 cut(s)	271
BstSFI	CTRYAG	1 cut(s)	159
BstSNI	TACGTA	1 cut(s)	361
BtsCI	GGATG	1 cut(s)	282
BtsIMutI	CAGTG	1 cut(s)	342
CciI	TCATGA	1 cut(s)	321
Csp6I	GTAC	1 cut(s)	362
CviAII	CATG	4 cut(s)	55, 77, 322, 409
CviQI	GTAC	1 cut(s)	362
DdeI	CTNAG	4 cut(s)	173, 385, 399, 422
DpnI	GATC	2 cut(s)	108, 204
DpnII	GATC	2 cut(s)	106, 202
Ecl136II	GAGCTC	1 cut(s)	398
Eco105I	TACGTA	1 cut(s)	361
Eco24I	GRGCYC	1 cut(s)	400
Eco53kI	GAGCTC	1 cut(s)	398
EcoICRI	GAGCTC	1 cut(s)	398
EcoRII	CCWGG	1 cut(s)	271
EcoT38I	GRGCYC	1 cut(s)	400
FaeI	CATG	4 cut(s)	58, 80, 325, 412
FaiI	YATR	8 cut(s)	56, 78, 269, 288, 323, 347, 410, 437
FatI	CATG	4 cut(s)	54, 76, 321, 408
FokI	GGATG	1 cut(s)	289
FriOI	GRGCYC	1 cut(s)	400
Hin1II	CATG	4 cut(s)	58, 80, 325, 412
HincII	GTYRAC	1 cut(s)	91
HindII	GTYRAC	1 cut(s)	91
HinfI	GANTC	3 cut(s)	244, 311, 367
HphI	GGTGA	2 cut(s)	253, 352
Hpy166II	GTNNAC	1 cut(s)	91
Hpy188I	TCNGA	4 cut(s)	355, 402, 425, 433
Hpy188III	TCNNGA	2 cut(s)	298, 322
Hpy8I	GTNNAC	1 cut(s)	91
HpyAV	CCTTC	1 cut(s)	319
HpyCH4III	ACNGT	3 cut(s)	98, 215, 429
HpyCH4IV	ACGT	1 cut(s)	360
HpyCH4V	TGCA	2 cut(s)	147, 161
HpyF10VI	GCNNNNNNNGC	2 cut(s)	14, 225
HpyF3I	CTNAG	4 cut(s)	173, 385, 399, 422
HpySE526I	ACGT	1 cut(s)	360
Hsp92II	CATG	4 cut(s)	58, 80, 325, 412
Kzo9I	GATC	2 cut(s)	106, 202
LmnI	GCTCC	2 cut(s)	67, 395
LpnPI	CCDG	5 cut(s)	233, 258, 267, 285, 348
LweI	GCATC	1 cut(s)	440
MaeII	ACGT	1 cut(s)	360
MaeIII	GTNAC	1 cut(s)	151
MalI	GATC	2 cut(s)	108, 204
MboI	GATC	2 cut(s)	106, 202
MboII	GAAGA	5 cut(s)	3, 15, 21, 27, 33
MhlI	GDGCHC	1 cut(s)	400
MluCI	AATT	3 cut(s)	252, 443, 464
MmeI	TCCRAC	2 cut(s)	162, 411
MnlI	CCTC	5 cut(s)	217, 322, 382, 385, 429
MseI	TTAA	1 cut(s)	375
MspR9I	CCNGG	1 cut(s)	273
MvaI	CCWGG	1 cut(s)	273
MwoI	GCNNNNNNNGC	2 cut(s)	14, 225
NdeII	GATC	2 cut(s)	106, 202
NlaIII	CATG	4 cut(s)	58, 80, 325, 412
NlaIV	GGNNCC	1 cut(s)	333
NmuCI	GTSAC	1 cut(s)	151
PagI	TCATGA	1 cut(s)	321
PfeI	GAWTC	3 cut(s)	244, 311, 367
PflMI	CCANNNNNTGG	1 cut(s)	82
Ppu21I	YACGTR	1 cut(s)	361
Psp124BI	GAGCTC	1 cut(s)	400
Psp6I	CCWGG	1 cut(s)	271
PspGI	CCWGG	1 cut(s)	271
PspN4I	GGNNCC	1 cut(s)	333
PstI	CTGCAG	1 cut(s)	163
RsaI	GTAC	1 cut(s)	363
RsaNI	GTAC	1 cut(s)	362
SacI	GAGCTC	1 cut(s)	400
SaqAI	TTAA	1 cut(s)	375
Sau3AI	GATC	2 cut(s)	106, 202
ScrFI	CCNGG	1 cut(s)	273
SduI	GDGCHC	1 cut(s)	400
SetI	ASST	7 cut(s)	129, 221, 243, 333, 363, 400, 479
SfaNI	GCATC	1 cut(s)	440
SfcI	CTRYAG	1 cut(s)	159
SmlI	CTYRAG	1 cut(s)	296
SmoI	CTYRAG	1 cut(s)	296
SnaBI	TACGTA	1 cut(s)	361
Sse9I	AATT	3 cut(s)	252, 443, 464
SstI	GAGCTC	1 cut(s)	400
StyD4I	CCNGG	1 cut(s)	271
TaaI	ACNGT	3 cut(s)	98, 215, 429
TaiI	ACGT	1 cut(s)	363
TaqI	TCGA	1 cut(s)	120
TasI	AATT	3 cut(s)	252, 443, 464
TfiI	GAWTC	3 cut(s)	244, 311, 367
Tru1I	TTAA	1 cut(s)	375
Tru9I	TTAA	1 cut(s)	375
TscAI	CASTG	1 cut(s)	342
TseFI	GTSAC	1 cut(s)	151
Tsp45I	GTSAC	1 cut(s)	151
TspDTI	ATGAA	9 cut(s)	9, 15, 21, 27, 43, 303, 338, 397, 476
TspRI	CASTG	1 cut(s)	342
Van91I	CCANNNNNTGG	1 cut(s)	82

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.