Prupe.2G265900_v2.0.a1

Indole-3-acetate O-methyltransferase 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
27258102 .. 27259815
1714 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G265900.1

Sequence Viewer

Length: 1158 bp
ATGGCTCCAAAGGGAGACAATGTTTTAGTTTCAAGTAAAAAGCTGGAGAAGATATTTTGCATGAAAGGAGGCAAAGGAGAGTCCAGCTATGCCAACAATTCCAAAGCGCAGGCCATGCATGCAAGATCCATGCTTCACCTGCTTAAAGAAACCCTAGACAGAGTGCAGCTGAGCTCTCCAGAAGTCCCCTTTGTGGTTGCGGACCTTGGATGCTCAAGTGGAAGCAACACCATCAACACCATAGATGTGATCATCAATCACATGGCCAAGCGCTATGAGGCCTCGGGATATGACCTACCTGAGTTCTCAGCCTTTTTCTCTGATCTCCCTAGCAATGACTTCAACACCCTCTTCCAACTCCTCCCTCCTATGGCCAACCACGGCGGTAGCATGGAGGAGACCCTCGCCGCCGACAGCCACCGCTCCTACTTCGCAGCCGGGGTCCCTGGCTCCTTTTACCGGCAGCTTTTCCCGTCGAGGTGCATTGACCTTTTTCACTCCGCGTTTTCCTTGCATTGGCTCTCACAGGTGCCAGAGAGTGTGGTAGACAAGAGATCAGCAGCCTACAACAAAGGAAAGGTGTTCATTCATGGAGCAAAGGAGAGCACAGCCAATGCATACAAGAAGCAGTTCCAGACAGACTTGGGAAGCTTTCTCAAGTTAAGAGGCAAGGAGCTCAAGAAAGGTGGCTCCATGTTTCTTGTCTGTTTGGGTAGGACCTCAGTGGACCCCACTGACCAAAGTGGCCCAGGCCTTCTCTTTGGGACCCATTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGTCTTATCACTAGTGAGAAACGTGACAGTTTCAACATTCCTATGTACGCCTCAAGCTTACAAGACTTCAAAGAAGTAGTGGAAGCTGATGGCTCATTCATCATAAACAAGCTTGAGATTTTCAAAGGAGGAAGCCCCCTTGTAGTAAGCCAACCTGATGATGCAGCTGAAGTCGGTCAAGCCCTTGCAAATAGCTGTAGGAGTGTCGCCGGAGTGCTCGTCGATGCACACATCGGTGACCAGCTTGGCAATGAGTTGTTTTCAAGACTTGAAAAAAAGGGCACAAGACAAGCCAAAGAGCTACTAGAGCATATACAATTCTTTCATGTGGTGGCATCACTTTCTCTTGCTTAA

Protein Analysis

386

Amino Acids

42.1

Weight (kDa)

6.19

Isoelectric Point (pI)

43.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 147
Acc36I ACCTGC 1 cut(s) 147
AccB1I GGYRCC 1 cut(s) 529
AccBSI CCGCTC 1 cut(s) 423
AccI GTMKAC 1 cut(s) 546
AccII CGCG 1 cut(s) 503
AciI CCGC 5 cut(s) 200, 384, 408, 421, 501
AclWI GGATC 1 cut(s) 120
AcoI YGGCCR 2 cut(s) 264, 372
AcuI CTGAAG 1 cut(s) 993
AfaI GTAC 1 cut(s) 851
AfeI AGCGCT 1 cut(s) 272
AfiI CCNNNNNNNGG 5 cut(s) 193, 370, 459, 516, 775
AgsI TTSAA 7 cut(s) 33, 343, 838, 874, 928, 1068, 1076
AhlI ACTAGT 1 cut(s) 815
AjnI CCWGG 2 cut(s) 445, 748
AleI CACNNNNGTG 1 cut(s) 1038
Alw21I GWGCWC 4 cut(s) 176, 608, 678, 1023
Alw26I GTCTC 2 cut(s) 9, 392
AlwI GGATC 1 cut(s) 120
Ama87I CYCGRG 1 cut(s) 283
Aor51HI AGCGCT 1 cut(s) 272
AoxI GGCC 6 cut(s) 111, 264, 279, 372, 745, 751
ApeKI GCWGC 5 cut(s) 166, 434, 463, 560, 968
Asp700I GAANNNNTTC 1 cut(s) 629
AspLEI GCGC 2 cut(s) 109, 273
AspS9I GGNCC 6 cut(s) 202, 442, 717, 727, 746, 765
AsuC2I CCSGG 1 cut(s) 439
AsuHPI GGTGA 2 cut(s) 128, 1052
AvaI CYCGRG 1 cut(s) 283
AvaII GGWCC 5 cut(s) 202, 442, 717, 727, 765
BaeGI GKGCMC 1 cut(s) 1088
BalI TGGCCA 2 cut(s) 266, 374
BanI GGYRCC 1 cut(s) 529
BanII GRGCYC 2 cut(s) 176, 678
Bbv12I GWGCWC 4 cut(s) 176, 608, 678, 1023
BbvI GCAGC 5 cut(s) 178, 446, 475, 572, 980
BccI CCATC 2 cut(s) 239, 887
BceAI ACGGC 1 cut(s) 397
BciT130I CCWGG 2 cut(s) 447, 750
BclI TGATCA 1 cut(s) 249
BcnI CCSGG 1 cut(s) 439
BcoDI GTCTC 2 cut(s) 9, 392
BcuI ACTAGT 1 cut(s) 815
BfaI CTAG 4 cut(s) 155, 330, 816, 1109
BfmI CTRYAG 1 cut(s) 1000
BfoI RGCGCY 1 cut(s) 274
BfuAI ACCTGC 1 cut(s) 147
BisI GCNGC 6 cut(s) 167, 408, 435, 464, 561, 969
BlpI GCTNAGC 1 cut(s) 170
BlsI GCNGC 6 cut(s) 168, 409, 436, 465, 562, 970
Bme1390I CCNGG 3 cut(s) 439, 447, 750
Bme18I GGWCC 5 cut(s) 202, 442, 717, 727, 765
BmeT110I CYCGRG 1 cut(s) 283
BmgT120I GGNCC 6 cut(s) 202, 442, 717, 727, 746, 765
BmiI GGNNCC 9 cut(s) 6, 443, 444, 451, 531, 691, 729, 766, 767
BmrFI CCNGG 3 cut(s) 439, 447, 750
BmsI GCATC 5 cut(s) 200, 769, 955, 1018, 1148
BpmI CTGGAG 2 cut(s) 65, 162
Bpu1102I GCTNAGC 1 cut(s) 170
BpuEI CTTGAG 5 cut(s) 199, 641, 662, 841, 938
BpuMI CCSGG 1 cut(s) 439
BsaI GGTCTC 1 cut(s) 392
BsaJI CCNNGG 6 cut(s) 205, 282, 379, 438, 445, 748
BsaXI ACNNNNNCTCC 4 cut(s) 6, 36, 1008, 1038
Bsc4I CCNNNNNNNGG 5 cut(s) 193, 370, 459, 516, 775
Bse118I RCCGGY 1 cut(s) 459
Bse3DI GCAATG 2 cut(s) 340, 1060
BseBI CCWGG 2 cut(s) 447, 750
BseDI CCNNGG 6 cut(s) 205, 282, 379, 438, 445, 748
BseGI GGATG 3 cut(s) 215, 784, 793
BseLI CCNNNNNNNGG 5 cut(s) 193, 370, 459, 516, 775
BseMI GCAATG 2 cut(s) 340, 1060
BseMII CTCAG 4 cut(s) 161, 291, 321, 735
BseRI GAGGAG 2 cut(s) 350, 410
BseSI GKGCMC 1 cut(s) 1088
BseXI GCAGC 5 cut(s) 178, 446, 475, 572, 980
BsgI GTGCAG 1 cut(s) 185
Bsh1236I CGCG 1 cut(s) 503
BshFI GGCC 6 cut(s) 113, 266, 281, 374, 747, 753
BshNI GGYRCC 1 cut(s) 529
BsiHKAI GWGCWC 4 cut(s) 176, 608, 678, 1023
BsiHKCI CYCGRG 1 cut(s) 283
BsiSI CCGG 3 cut(s) 438, 460, 1014
BslFI GGGAC 3 cut(s) 170, 428, 778
BslI CCNNNNNNNGG 5 cut(s) 193, 370, 459, 516, 775
BsmAI GTCTC 2 cut(s) 9, 392
BsmFI GGGAC 3 cut(s) 170, 428, 778
BsnI GGCC 6 cut(s) 113, 266, 281, 374, 747, 753
Bso31I GGTCTC 1 cut(s) 392
BsoBI CYCGRG 1 cut(s) 283
Bsp1286I GDGCHC 5 cut(s) 176, 608, 678, 1023, 1088
Bsp143I GATC 5 cut(s) 125, 249, 322, 554, 790
Bsp1720I GCTNAGC 1 cut(s) 170
BspACI CCGC 5 cut(s) 200, 384, 408, 421, 501
BspANI GGCC 6 cut(s) 113, 266, 281, 374, 747, 753
BspCNI CTCAG 4 cut(s) 162, 292, 320, 734
BspFNI CGCG 1 cut(s) 503
BspLI GGNNCC 9 cut(s) 6, 443, 444, 451, 531, 691, 729, 766, 767
BspMI ACCTGC 1 cut(s) 147
BspPI GGATC 1 cut(s) 120
BspT107I GGYRCC 1 cut(s) 529
BspTNI GGTCTC 1 cut(s) 392
BsrBI CCGCTC 1 cut(s) 423
BsrDI GCAATG 2 cut(s) 340, 1060
BsrFI RCCGGY 1 cut(s) 459
BssAI RCCGGY 1 cut(s) 459
BssECI CCNNGG 6 cut(s) 205, 282, 379, 438, 445, 748
BssMI GATC 5 cut(s) 125, 249, 322, 554, 790
BssT1I CCWWGG 1 cut(s) 205
Bst2UI CCWGG 2 cut(s) 447, 750
Bst4CI ACNGT 1 cut(s) 833
Bst6I CTCTTC 1 cut(s) 356
BstAPI GCANNNNNTGC 1 cut(s) 115
BstC8I GCNNGC 2 cut(s) 111, 120
BstDEI CTNAG 4 cut(s) 170, 300, 307, 721
BstDSI CCRYGG 1 cut(s) 379
BstEII GGTNACC 1 cut(s) 1040
BstF5I GGATG 3 cut(s) 215, 784, 793
BstFNI CGCG 1 cut(s) 503
BstH2I RGCGCY 1 cut(s) 274
BstHHI GCGC 2 cut(s) 109, 273
BstKTI GATC 5 cut(s) 128, 252, 325, 557, 793
BstMAI GTCTC 2 cut(s) 9, 392
BstMBI GATC 5 cut(s) 125, 249, 322, 554, 790
BstMWI GCNNNNNNNGC 4 cut(s) 115, 119, 139, 1111
BstNI CCWGG 2 cut(s) 447, 750
BstNSI RCATGY 1 cut(s) 122
BstPI GGTNACC 1 cut(s) 1040
BstSCI CCNGG 3 cut(s) 437, 445, 748
BstSFI CTRYAG 1 cut(s) 1000
BstSLI GKGCMC 1 cut(s) 1088
BstUI CGCG 1 cut(s) 503
BstV1I GCAGC 5 cut(s) 178, 446, 475, 572, 980
BstX2I RGATCY 1 cut(s) 125
BstYI RGATCY 1 cut(s) 125
BsuRI GGCC 6 cut(s) 113, 266, 281, 374, 747, 753
BtgI CCRYGG 1 cut(s) 379
BtsCI GGATG 3 cut(s) 215, 784, 793
BtsIMutI CAGTG 2 cut(s) 729, 732
BveI ACCTGC 1 cut(s) 147
Cac8I GCNNGC 2 cut(s) 111, 120
CfoI GCGC 2 cut(s) 109, 273
Cfr10I RCCGGY 1 cut(s) 459
Cfr13I GGNCC 6 cut(s) 202, 442, 717, 727, 746, 765
Csp6I GTAC 1 cut(s) 850
CspCI CAANNNNNGTGG 2 cut(s) 667, 702
CviAII CATG 9 cut(s) 61, 115, 119, 130, 262, 391, 590, 694, 1130
CviQI GTAC 1 cut(s) 850
DdeI CTNAG 4 cut(s) 170, 300, 307, 721
DpnI GATC 5 cut(s) 127, 251, 324, 556, 792
DpnII GATC 5 cut(s) 125, 249, 322, 554, 790
EaeI YGGCCR 2 cut(s) 264, 372
Eam1104I CTCTTC 1 cut(s) 356
EarI CTCTTC 1 cut(s) 356
Ecl136II GAGCTC 2 cut(s) 174, 676
Eco130I CCWWGG 1 cut(s) 205
Eco147I AGGCCT 2 cut(s) 281, 753
Eco24I GRGCYC 2 cut(s) 176, 678
Eco31I GGTCTC 1 cut(s) 392
Eco47I GGWCC 5 cut(s) 202, 442, 717, 727, 765
Eco47III AGCGCT 1 cut(s) 272
Eco53kI GAGCTC 2 cut(s) 174, 676
Eco57I CTGAAG 1 cut(s) 993
Eco88I CYCGRG 1 cut(s) 283
Eco91I GGTNACC 1 cut(s) 1040
EcoICRI GAGCTC 2 cut(s) 174, 676
EcoO109I RGGNCCY 3 cut(s) 442, 717, 765
EcoO65I GGTNACC 1 cut(s) 1040
EcoRII CCWGG 2 cut(s) 445, 748
EcoT14I CCWWGG 1 cut(s) 205
EcoT22I ATGCAT 2 cut(s) 120, 619
EcoT38I GRGCYC 2 cut(s) 176, 678
ErhI CCWWGG 1 cut(s) 205
FaeI CATG 9 cut(s) 64, 118, 122, 133, 265, 394, 593, 697, 1133
FalI AAGNNNNNCTT 2 cut(s) 792, 824
FaqI GGGAC 3 cut(s) 170, 428, 778
FatI CATG 9 cut(s) 60, 114, 118, 129, 261, 390, 589, 693, 1129
FbaI TGATCA 1 cut(s) 249
FblI GTMKAC 1 cut(s) 546
Fnu4HI GCNGC 6 cut(s) 167, 408, 435, 464, 561, 969
FokI GGATG 3 cut(s) 222, 791, 800
FriOI GRGCYC 2 cut(s) 176, 678
Fsp4HI GCNGC 6 cut(s) 167, 408, 435, 464, 561, 969
FspBI CTAG 4 cut(s) 155, 330, 816, 1109
GlaI GCGC 2 cut(s) 108, 272
GluI GCNGC 6 cut(s) 167, 408, 435, 464, 561, 969
GsuI CTGGAG 2 cut(s) 65, 162
HaeII RGCGCY 1 cut(s) 274
HaeIII GGCC 6 cut(s) 113, 266, 281, 374, 747, 753
HapII CCGG 3 cut(s) 438, 460, 1014
HhaI GCGC 2 cut(s) 109, 273
Hin1II CATG 9 cut(s) 64, 118, 122, 133, 265, 394, 593, 697, 1133
Hin6I GCGC 2 cut(s) 107, 271
HinP1I GCGC 2 cut(s) 107, 271
HindIII AAGCTT 3 cut(s) 649, 859, 914
HinfI GANTC 1 cut(s) 80
HpaII CCGG 3 cut(s) 438, 460, 1014
HphI GGTGA 2 cut(s) 128, 1052
Hpy166II GTNNAC 2 cut(s) 547, 727
Hpy188I TCNGA 1 cut(s) 322
Hpy188III TCNNGA 6 cut(s) 179, 285, 634, 679, 776, 1068
Hpy8I GTNNAC 2 cut(s) 547, 727
Hpy99I CGWCG 2 cut(s) 478, 1028
HpyAV CCTTC 1 cut(s) 764
HpyCH4III ACNGT 1 cut(s) 833
HpyCH4IV ACGT 1 cut(s) 826
HpyF10VI GCNNNNNNNGC 4 cut(s) 115, 119, 139, 1111
HpyF3I CTNAG 4 cut(s) 170, 300, 307, 721
HpySE526I ACGT 1 cut(s) 826
Hsp92II CATG 9 cut(s) 64, 118, 122, 133, 265, 394, 593, 697, 1133
HspAI GCGC 2 cut(s) 107, 271
KflI GGGWCCC 2 cut(s) 442, 765
Ksp22I TGATCA 1 cut(s) 249
Kzo9I GATC 5 cut(s) 125, 249, 322, 554, 790
LmnI GCTCC 6 cut(s) 10, 428, 455, 593, 673, 695
Lsp1109I GCAGC 5 cut(s) 178, 446, 475, 572, 980
LweI GCATC 5 cut(s) 200, 769, 955, 1018, 1148
MaeI CTAG 4 cut(s) 155, 330, 816, 1109
MaeII ACGT 1 cut(s) 826
MaeIII GTNAC 2 cut(s) 827, 1040
MalI GATC 5 cut(s) 127, 251, 324, 556, 792
MbiI CCGCTC 1 cut(s) 423
MboI GATC 5 cut(s) 125, 249, 322, 554, 790
MboII GAAGA 2 cut(s) 61, 343
MflI RGATCY 1 cut(s) 125
MhlI GDGCHC 5 cut(s) 176, 608, 678, 1023, 1088
MlsI TGGCCA 2 cut(s) 266, 374
MluCI AATT 2 cut(s) 97, 1121
MluNI TGGCCA 2 cut(s) 266, 374
MlyI GAGTC 1 cut(s) 89
MmeI TCCRAC 1 cut(s) 379
Mox20I TGGCCA 2 cut(s) 266, 374
Mph1103I ATGCAT 2 cut(s) 120, 619
MroXI GAANNNNTTC 1 cut(s) 629
MscI TGGCCA 2 cut(s) 266, 374
MseI TTAA 3 cut(s) 144, 662, 1156
MslI CAYNNNNRTG 3 cut(s) 245, 845, 1038
Msp20I TGGCCA 2 cut(s) 266, 374
MspA1I CMGCKG 2 cut(s) 169, 971
MspI CCGG 3 cut(s) 438, 460, 1014
MspR9I CCNGG 3 cut(s) 439, 447, 750
MvaI CCWGG 2 cut(s) 447, 750
MvnI CGCG 1 cut(s) 503
MwoI GCNNNNNNNGC 4 cut(s) 115, 119, 139, 1111
NciI CCSGG 1 cut(s) 439
NdeII GATC 5 cut(s) 125, 249, 322, 554, 790
NlaIII CATG 9 cut(s) 64, 118, 122, 133, 265, 394, 593, 697, 1133
NlaIV GGNNCC 9 cut(s) 6, 443, 444, 451, 531, 691, 729, 766, 767
NmuCI GTSAC 2 cut(s) 827, 1040
NsiI ATGCAT 2 cut(s) 120, 619
NspI RCATGY 1 cut(s) 122
OliI CACNNNNGTG 1 cut(s) 1038
PaeI GCATGC 1 cut(s) 122
PaqCI CACCTGC 1 cut(s) 147
PceI AGGCCT 2 cut(s) 281, 753
PdmI GAANNNNTTC 1 cut(s) 629
PkrI GCNGC 6 cut(s) 168, 409, 436, 465, 562, 970
PleI GAGTC 1 cut(s) 88
PpsI GAGTC 1 cut(s) 88
PpuMI RGGWCCY 3 cut(s) 442, 717, 765
Psp124BI GAGCTC 2 cut(s) 176, 678
Psp5II RGGWCCY 3 cut(s) 442, 717, 765
Psp6I CCWGG 2 cut(s) 445, 748
PspEI GGTNACC 1 cut(s) 1040
PspGI CCWGG 2 cut(s) 445, 748
PspN4I GGNNCC 9 cut(s) 6, 443, 444, 451, 531, 691, 729, 766, 767
PspPI GGNCC 6 cut(s) 202, 442, 717, 727, 746, 765
PspPPI RGGWCCY 3 cut(s) 442, 717, 765
PsuI RGATCY 1 cut(s) 125
PvuII CAGCTG 2 cut(s) 169, 971
RsaI GTAC 1 cut(s) 851
RsaNI GTAC 1 cut(s) 850
RseI CAYNNNNRTG 3 cut(s) 245, 845, 1038
SacI GAGCTC 2 cut(s) 176, 678
SaqAI TTAA 3 cut(s) 144, 662, 1156
SatI GCNGC 6 cut(s) 167, 408, 435, 464, 561, 969
Sau3AI GATC 5 cut(s) 125, 249, 322, 554, 790
Sau96I GGNCC 6 cut(s) 202, 442, 717, 727, 746, 765
SchI GAGTC 1 cut(s) 89
ScrFI CCNGG 3 cut(s) 439, 447, 750
SduI GDGCHC 5 cut(s) 176, 608, 678, 1023, 1088
SfaNI GCATC 5 cut(s) 200, 769, 955, 1018, 1148
SfcI CTRYAG 1 cut(s) 1000
SinI GGWCC 5 cut(s) 202, 442, 717, 727, 765
SmiMI CAYNNNNRTG 3 cut(s) 245, 845, 1038
SmlI CTYRAG 5 cut(s) 214, 656, 677, 856, 917
SmoI CTYRAG 5 cut(s) 214, 656, 677, 856, 917
SpeI ACTAGT 1 cut(s) 815
SphI GCATGC 1 cut(s) 122
Sse9I AATT 2 cut(s) 97, 1121
SseBI AGGCCT 2 cut(s) 281, 753
SsiI CCGC 5 cut(s) 200, 384, 408, 421, 501
SspMI CTAG 4 cut(s) 155, 330, 816, 1109
SstI GAGCTC 2 cut(s) 176, 678
StuI AGGCCT 2 cut(s) 281, 753
StyD4I CCNGG 3 cut(s) 437, 445, 748
StyI CCWWGG 1 cut(s) 205
TaaI ACNGT 1 cut(s) 833
TaiI ACGT 1 cut(s) 829
TaqI TCGA 2 cut(s) 476, 1026
TaqII GACCGA 1 cut(s) 968
TasI AATT 2 cut(s) 97, 1121
TauI GCSGC 1 cut(s) 410
Tru1I TTAA 3 cut(s) 144, 662, 1156
Tru9I TTAA 3 cut(s) 144, 662, 1156
TscAI CASTG 2 cut(s) 729, 739
TseFI GTSAC 2 cut(s) 827, 1040
TseI GCWGC 5 cut(s) 166, 434, 463, 560, 968
Tsp45I GTSAC 2 cut(s) 827, 1040
TspDTI ATGAA 5 cut(s) 77, 574, 578, 892, 1118
TspRI CASTG 2 cut(s) 729, 739
VpaK11BI GGWCC 5 cut(s) 202, 442, 717, 727, 765
XceI RCATGY 1 cut(s) 122
XmiI GTMKAC 1 cut(s) 546
XmnI GAANNNNTTC 1 cut(s) 629
XspI CTAG 4 cut(s) 155, 330, 816, 1109
Zsp2I ATGCAT 2 cut(s) 120, 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.