Prupe.4G223900_v2.0.a1

Indole-3-acetate O-methyltransferase 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
14073751 .. 14076166
2416 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G223900.2

Sequence Viewer

Length: 1164 bp
ATGTTCATGGCTCCCAAGGGGGACAATGTTTTAGTTTCAAGTATAAAGCTCGAGAAGATATTTAGCATGAAAGGAGGCAAAGGAGAGTCCAGCTATGCTAACAATTCCAAAGCCCAAGCCATACATGCAAGATCCATGCTTCACCTGCTTAAAGAAACCCTAGACAGAGTGCAACTGAGCTCTCCAGAAGTGCCCTTTGTGGTTGCGGACCTTGGTTGCTCAAGTGGAAGCAACACCATCAACACCGTAGATGTGATCATCAAGCACATTGCCAAGCGCTATGAGGCCTTGGGATATAACCCACCTGAGTTCTCAGCCTTTTTCTCTGATCTCCCTAGCAATGACTTCAACACCCTCTTCCAACTCTTCCCTCCATTGGCTAACCACGGCAGTAGCATGGAGGAGACCCTCGCTGCCGACAGCCACCGCTCCTACTTCGCTGCGGGAGTCCCGGGCTCCTTCTACCGGCGGCTTTTCCCGTCGATGTCCATTGACCTTTTCCACTCTGCGTTTTCCTTGCACTGGCTCTCACAAGTGCCAGAGAGTGTGGTAGACAAGAGATCAGCGGCCTACAACAAAGGAAGGGTGTTCATTCATGGAGCGAAGGAGAGCACAGTCAATGCATACAAGAAGCAGTTCCAGGCAGACTTGGCAAGCTTTCTCAGGTTAAGAGCCAAGGAGCTCAAGAAAGGTGGCTCCATGTTTCTTGTCTGTTTGGGTAGAACATCAGTGGACCCCACTGACCAAAGTGGCCCAGGCCTTCTCTTTGGGACCCACTTTCAGGATGCTTGGAATGATCTTGTCCAAGAGGGTCTTATCACTAGTGAGAAACGTGACAACTTCAACATTCCTGTGTATGCTTCAAGCTTACAAGACTTCAAGGAAGTAGTGGAAGTTGATGGCTCATTCACTATAAACAAGCTTGAGATTTTCAAAGGAGGAAGCCCCTTTGTAGTAAACCAACCTGATGATGCAGCTGAAGTTGGTCGAGCCCTTGCAAACAGTTGTAGGAGTGTCTCCGGAGTGCTTGTCGATGCACACATCGGTGACCACCTTGGCAATGAGTTGTTTTCAAGAGTGGAAAAAAGGGGAACAAGCCAAGCCAAAGAGCTACTAGAGCAGATACAATTCTTTCATGTAGTGGCATCACTTTCTCTTGCTTAA

Protein Analysis

388

Amino Acids

42.5

Weight (kDa)

6.46

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 153
Acc36I ACCTGC 1 cut(s) 153
AccBSI CCGCTC 1 cut(s) 429
AccI GTMKAC 1 cut(s) 552
AccIII TCCGGA 1 cut(s) 1019
AciI CCGC 5 cut(s) 206, 427, 443, 469, 566
AclWI GGATC 1 cut(s) 126
AcuI CTGAAG 1 cut(s) 999
AfeI AGCGCT 1 cut(s) 278
AfiI CCNNNNNNNGG 4 cut(s) 376, 465, 522, 781
AgsI TTSAA 7 cut(s) 39, 349, 844, 864, 880, 934, 1074
AhlI ACTAGT 1 cut(s) 821
AjnI CCWGG 2 cut(s) 639, 754
AleI CACNNNNGTG 1 cut(s) 1044
AluBI AGCT 9 cut(s) 49, 93, 180, 657, 682, 867, 922, 977, 1111
AluI AGCT 9 cut(s) 49, 93, 180, 657, 682, 867, 922, 977, 1111
Alw21I GWGCWC 3 cut(s) 182, 614, 684
Alw26I GTCTC 2 cut(s) 398, 1021
AlwI GGATC 1 cut(s) 126
Ama87I CYCGRG 2 cut(s) 50, 451
Aor13HI TCCGGA 1 cut(s) 1019
Aor51HI AGCGCT 1 cut(s) 278
AoxI GGCC 4 cut(s) 285, 567, 751, 757
ApeKI GCWGC 3 cut(s) 413, 440, 974
Asp700I GAANNNNTTC 1 cut(s) 635
AspLEI GCGC 1 cut(s) 279
AspS9I GGNCC 4 cut(s) 208, 733, 752, 771
AsuC2I CCSGG 2 cut(s) 452, 453
AsuHPI GGTGA 2 cut(s) 134, 1058
AvaI CYCGRG 2 cut(s) 50, 451
AvaII GGWCC 3 cut(s) 208, 733, 771
BaeGI GKGCMC 1 cut(s) 195
BanII GRGCYC 4 cut(s) 182, 458, 684, 994
Bbv12I GWGCWC 3 cut(s) 182, 614, 684
BbvI GCAGC 3 cut(s) 400, 427, 986
BccI CCATC 2 cut(s) 245, 893
BceAI ACGGC 1 cut(s) 403
BciT130I CCWGG 2 cut(s) 641, 756
BclI TGATCA 1 cut(s) 255
BcnI CCSGG 2 cut(s) 452, 453
BcoDI GTCTC 2 cut(s) 398, 1021
BcuI ACTAGT 1 cut(s) 821
BfaI CTAG 4 cut(s) 161, 336, 822, 1115
BfoI RGCGCY 1 cut(s) 280
BfuAI ACCTGC 1 cut(s) 153
BisI GCNGC 5 cut(s) 414, 441, 470, 567, 975
BlsI GCNGC 5 cut(s) 415, 442, 471, 568, 976
Bme1390I CCNGG 4 cut(s) 452, 453, 641, 756
Bme18I GGWCC 3 cut(s) 208, 733, 771
BmeT110I CYCGRG 2 cut(s) 50, 451
BmgT120I GGNCC 4 cut(s) 208, 733, 752, 771
BmiI GGNNCC 6 cut(s) 12, 457, 697, 735, 772, 773
BmrFI CCNGG 4 cut(s) 452, 453, 641, 756
BmsI GCATC 4 cut(s) 775, 961, 1024, 1154
BpmI CTGGAG 1 cut(s) 168
BpuEI CTTGAG 3 cut(s) 205, 668, 944
BpuMI CCSGG 2 cut(s) 452, 453
BsaI GGTCTC 1 cut(s) 398
BsaJI CCNNGG 8 cut(s) 15, 211, 288, 385, 451, 675, 754, 1054
BsaWI WCCGGW 1 cut(s) 1019
BsaXI ACNNNNNCTCC 2 cut(s) 1014, 1044
Bsc4I CCNNNNNNNGG 4 cut(s) 376, 465, 522, 781
Bse118I RCCGGY 1 cut(s) 465
Bse1I ACTGG 1 cut(s) 527
Bse3DI GCAATG 3 cut(s) 267, 346, 1066
BseAI TCCGGA 1 cut(s) 1019
BseBI CCWGG 2 cut(s) 641, 756
BseDI CCNNGG 8 cut(s) 15, 211, 288, 385, 451, 675, 754, 1054
BseGI GGATG 1 cut(s) 790
BseLI CCNNNNNNNGG 4 cut(s) 376, 465, 522, 781
BseMI GCAATG 3 cut(s) 267, 346, 1066
BseMII CTCAG 4 cut(s) 167, 297, 327, 676
BseNI ACTGG 1 cut(s) 527
BseRI GAGGAG 1 cut(s) 416
BseSI GKGCMC 1 cut(s) 195
BseXI GCAGC 3 cut(s) 400, 427, 986
BshFI GGCC 4 cut(s) 287, 569, 753, 759
BsiHKAI GWGCWC 3 cut(s) 182, 614, 684
BsiHKCI CYCGRG 2 cut(s) 50, 451
BsiSI CCGG 3 cut(s) 452, 466, 1020
BslFI GGGAC 3 cut(s) 35, 434, 784
BslI CCNNNNNNNGG 4 cut(s) 376, 465, 522, 781
BsmAI GTCTC 2 cut(s) 398, 1021
BsmFI GGGAC 3 cut(s) 35, 434, 784
BsnI GGCC 4 cut(s) 287, 569, 753, 759
Bso31I GGTCTC 1 cut(s) 398
BsoBI CYCGRG 2 cut(s) 50, 451
Bsp1286I GDGCHC 6 cut(s) 182, 195, 458, 614, 684, 994
Bsp13I TCCGGA 1 cut(s) 1019
Bsp143I GATC 5 cut(s) 131, 255, 328, 560, 796
BspACI CCGC 5 cut(s) 206, 427, 443, 469, 566
BspANI GGCC 4 cut(s) 287, 569, 753, 759
BspCNI CTCAG 4 cut(s) 168, 298, 326, 675
BspEI TCCGGA 1 cut(s) 1019
BspLI GGNNCC 6 cut(s) 12, 457, 697, 735, 772, 773
BspMI ACCTGC 1 cut(s) 153
BspPI GGATC 1 cut(s) 126
BspTNI GGTCTC 1 cut(s) 398
BsrBI CCGCTC 1 cut(s) 429
BsrDI GCAATG 3 cut(s) 267, 346, 1066
BsrFI RCCGGY 1 cut(s) 465
BsrI ACTGG 1 cut(s) 527
BssAI RCCGGY 1 cut(s) 465
BssECI CCNNGG 8 cut(s) 15, 211, 288, 385, 451, 675, 754, 1054
BssMI GATC 5 cut(s) 131, 255, 328, 560, 796
BssT1I CCWWGG 5 cut(s) 15, 211, 288, 675, 1054
Bst2UI CCWGG 2 cut(s) 641, 756
Bst4CI ACNGT 3 cut(s) 247, 616, 1004
Bst6I CTCTTC 2 cut(s) 362, 371
BstC8I GCNNGC 1 cut(s) 655
BstDEI CTNAG 4 cut(s) 176, 306, 313, 662
BstDSI CCRYGG 1 cut(s) 385
BstEII GGTNACC 1 cut(s) 1046
BstF5I GGATG 1 cut(s) 790
BstH2I RGCGCY 1 cut(s) 280
BstHHI GCGC 1 cut(s) 279
BstKTI GATC 5 cut(s) 134, 258, 331, 563, 799
BstMAI GTCTC 2 cut(s) 398, 1021
BstMBI GATC 5 cut(s) 131, 255, 328, 560, 796
BstMWI GCNNNNNNNGC 4 cut(s) 125, 145, 650, 1117
BstNI CCWGG 2 cut(s) 641, 756
BstNSI RCATGY 1 cut(s) 128
BstPI GGTNACC 1 cut(s) 1046
BstSCI CCNGG 4 cut(s) 450, 451, 639, 754
BstSLI GKGCMC 1 cut(s) 195
BstV1I GCAGC 3 cut(s) 400, 427, 986
BstX2I RGATCY 1 cut(s) 131
BstYI RGATCY 1 cut(s) 131
BsuRI GGCC 4 cut(s) 287, 569, 753, 759
BtgI CCRYGG 1 cut(s) 385
BtsCI GGATG 1 cut(s) 790
BtsIMutI CAGTG 3 cut(s) 520, 735, 738
BveI ACCTGC 1 cut(s) 153
Cac8I GCNNGC 1 cut(s) 655
CfoI GCGC 1 cut(s) 279
Cfr10I RCCGGY 1 cut(s) 465
Cfr13I GGNCC 4 cut(s) 208, 733, 752, 771
Cfr9I CCCGGG 1 cut(s) 451
CspCI CAANNNNNGTGG 2 cut(s) 673, 708
CviAII CATG 8 cut(s) 7, 67, 125, 136, 397, 596, 700, 1136
DdeI CTNAG 4 cut(s) 176, 306, 313, 662
DpnI GATC 5 cut(s) 133, 257, 330, 562, 798
DpnII GATC 5 cut(s) 131, 255, 328, 560, 796
Eam1104I CTCTTC 2 cut(s) 362, 371
EarI CTCTTC 2 cut(s) 362, 371
Ecl136II GAGCTC 2 cut(s) 180, 682
Eco130I CCWWGG 5 cut(s) 15, 211, 288, 675, 1054
Eco147I AGGCCT 2 cut(s) 287, 759
Eco24I GRGCYC 4 cut(s) 182, 458, 684, 994
Eco31I GGTCTC 1 cut(s) 398
Eco47I GGWCC 3 cut(s) 208, 733, 771
Eco47III AGCGCT 1 cut(s) 278
Eco53kI GAGCTC 2 cut(s) 180, 682
Eco57I CTGAAG 1 cut(s) 999
Eco88I CYCGRG 2 cut(s) 50, 451
Eco91I GGTNACC 1 cut(s) 1046
EcoICRI GAGCTC 2 cut(s) 180, 682
EcoO109I RGGNCCY 1 cut(s) 771
EcoO65I GGTNACC 1 cut(s) 1046
EcoRII CCWGG 2 cut(s) 639, 754
EcoT14I CCWWGG 5 cut(s) 15, 211, 288, 675, 1054
EcoT22I ATGCAT 1 cut(s) 625
EcoT38I GRGCYC 4 cut(s) 182, 458, 684, 994
ErhI CCWWGG 5 cut(s) 15, 211, 288, 675, 1054
FaeI CATG 8 cut(s) 10, 70, 128, 139, 400, 599, 703, 1139
FalI AAGNNNNNCTT 2 cut(s) 798, 830
FaqI GGGAC 3 cut(s) 35, 434, 784
FatI CATG 8 cut(s) 6, 66, 124, 135, 396, 595, 699, 1135
FauI CCCGC 1 cut(s) 436
FbaI TGATCA 1 cut(s) 255
FblI GTMKAC 1 cut(s) 552
Fnu4HI GCNGC 5 cut(s) 414, 441, 470, 567, 975
FokI GGATG 1 cut(s) 797
FriOI GRGCYC 4 cut(s) 182, 458, 684, 994
Fsp4HI GCNGC 5 cut(s) 414, 441, 470, 567, 975
FspBI CTAG 4 cut(s) 161, 336, 822, 1115
GlaI GCGC 1 cut(s) 278
GluI GCNGC 5 cut(s) 414, 441, 470, 567, 975
GsuI CTGGAG 1 cut(s) 168
HaeII RGCGCY 1 cut(s) 280
HaeIII GGCC 4 cut(s) 287, 569, 753, 759
HapII CCGG 3 cut(s) 452, 466, 1020
HhaI GCGC 1 cut(s) 279
Hin1II CATG 8 cut(s) 10, 70, 128, 139, 400, 599, 703, 1139
Hin6I GCGC 1 cut(s) 277
HinP1I GCGC 1 cut(s) 277
HindIII AAGCTT 3 cut(s) 655, 865, 920
HinfI GANTC 2 cut(s) 86, 447
HpaII CCGG 3 cut(s) 452, 466, 1020
HphI GGTGA 2 cut(s) 134, 1058
Hpy166II GTNNAC 3 cut(s) 553, 733, 958
Hpy188I TCNGA 1 cut(s) 328
Hpy188III TCNNGA 6 cut(s) 52, 185, 685, 782, 1020, 1074
Hpy8I GTNNAC 3 cut(s) 553, 733, 958
Hpy99I CGWCG 1 cut(s) 484
HpyAV CCTTC 4 cut(s) 469, 576, 598, 770
HpyCH4III ACNGT 3 cut(s) 247, 616, 1004
HpyCH4IV ACGT 1 cut(s) 832
HpyCH4V TGCA 7 cut(s) 128, 172, 520, 623, 974, 998, 1037
HpyF10VI GCNNNNNNNGC 4 cut(s) 125, 145, 650, 1117
HpyF3I CTNAG 4 cut(s) 176, 306, 313, 662
HpySE526I ACGT 1 cut(s) 832
Hsp92II CATG 8 cut(s) 10, 70, 128, 139, 400, 599, 703, 1139
HspAI GCGC 1 cut(s) 277
KflI GGGWCCC 1 cut(s) 771
Kpn2I TCCGGA 1 cut(s) 1019
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 5 cut(s) 131, 255, 328, 560, 796
LmnI GCTCC 6 cut(s) 16, 434, 461, 599, 679, 701
Lsp1109I GCAGC 3 cut(s) 400, 427, 986
LweI GCATC 4 cut(s) 775, 961, 1024, 1154
MaeI CTAG 4 cut(s) 161, 336, 822, 1115
MaeII ACGT 1 cut(s) 832
MaeIII GTNAC 2 cut(s) 833, 1046
MalI GATC 5 cut(s) 133, 257, 330, 562, 798
MbiI CCGCTC 1 cut(s) 429
MboI GATC 5 cut(s) 131, 255, 328, 560, 796
MboII GAAGA 3 cut(s) 67, 349, 358
MflI RGATCY 1 cut(s) 131
MhlI GDGCHC 6 cut(s) 182, 195, 458, 614, 684, 994
MluCI AATT 2 cut(s) 103, 1127
MlyI GAGTC 2 cut(s) 95, 456
MmeI TCCRAC 1 cut(s) 385
MnlI CCTC 8 cut(s) 68, 277, 365, 381, 394, 419, 802, 932
Mph1103I ATGCAT 1 cut(s) 625
MroI TCCGGA 1 cut(s) 1019
MroXI GAANNNNTTC 1 cut(s) 635
MseI TTAA 3 cut(s) 150, 668, 1162
MslI CAYNNNNRTG 2 cut(s) 851, 1044
MspA1I CMGCKG 2 cut(s) 566, 977
MspI CCGG 3 cut(s) 452, 466, 1020
MspR9I CCNGG 4 cut(s) 452, 453, 641, 756
MvaI CCWGG 2 cut(s) 641, 756
MwoI GCNNNNNNNGC 4 cut(s) 125, 145, 650, 1117
NciI CCSGG 2 cut(s) 452, 453
NdeII GATC 5 cut(s) 131, 255, 328, 560, 796
NlaIII CATG 8 cut(s) 10, 70, 128, 139, 400, 599, 703, 1139
NlaIV GGNNCC 6 cut(s) 12, 457, 697, 735, 772, 773
NmuCI GTSAC 2 cut(s) 833, 1046
NsiI ATGCAT 1 cut(s) 625
NspI RCATGY 1 cut(s) 128
OliI CACNNNNGTG 1 cut(s) 1044
PaeR7I CTCGAG 1 cut(s) 50
PaqCI CACCTGC 1 cut(s) 153
PceI AGGCCT 2 cut(s) 287, 759
PdmI GAANNNNTTC 1 cut(s) 635
PkrI GCNGC 5 cut(s) 415, 442, 471, 568, 976
PleI GAGTC 2 cut(s) 94, 455
PpsI GAGTC 2 cut(s) 94, 455
PpuMI RGGWCCY 1 cut(s) 771
Psp124BI GAGCTC 2 cut(s) 182, 684
Psp5II RGGWCCY 1 cut(s) 771
Psp6I CCWGG 2 cut(s) 639, 754
PspEI GGTNACC 1 cut(s) 1046
PspGI CCWGG 2 cut(s) 639, 754
PspN4I GGNNCC 6 cut(s) 12, 457, 697, 735, 772, 773
PspPI GGNCC 4 cut(s) 208, 733, 752, 771
PspPPI RGGWCCY 1 cut(s) 771
PsuI RGATCY 1 cut(s) 131
PvuII CAGCTG 1 cut(s) 977
RseI CAYNNNNRTG 2 cut(s) 851, 1044
SacI GAGCTC 2 cut(s) 182, 684
SaqAI TTAA 3 cut(s) 150, 668, 1162
SatI GCNGC 5 cut(s) 414, 441, 470, 567, 975
Sau3AI GATC 5 cut(s) 131, 255, 328, 560, 796
Sau96I GGNCC 4 cut(s) 208, 733, 752, 771
SchI GAGTC 2 cut(s) 95, 456
ScrFI CCNGG 4 cut(s) 452, 453, 641, 756
SduI GDGCHC 6 cut(s) 182, 195, 458, 614, 684, 994
SfaNI GCATC 4 cut(s) 775, 961, 1024, 1154
Sfr274I CTCGAG 1 cut(s) 50
SinI GGWCC 3 cut(s) 208, 733, 771
SlaI CTCGAG 1 cut(s) 50
SmaI CCCGGG 1 cut(s) 453
SmiMI CAYNNNNRTG 2 cut(s) 851, 1044
SmlI CTYRAG 4 cut(s) 50, 220, 683, 923
SmoI CTYRAG 4 cut(s) 50, 220, 683, 923
SpeI ACTAGT 1 cut(s) 821
Sse9I AATT 2 cut(s) 103, 1127
SseBI AGGCCT 2 cut(s) 287, 759
SsiI CCGC 5 cut(s) 206, 427, 443, 469, 566
SspMI CTAG 4 cut(s) 161, 336, 822, 1115
SstI GAGCTC 2 cut(s) 182, 684
StuI AGGCCT 2 cut(s) 287, 759
StyD4I CCNGG 4 cut(s) 450, 451, 639, 754
StyI CCWWGG 5 cut(s) 15, 211, 288, 675, 1054
TaaI ACNGT 3 cut(s) 247, 616, 1004
TaiI ACGT 1 cut(s) 835
TaqI TCGA 4 cut(s) 51, 482, 988, 1032
TasI AATT 2 cut(s) 103, 1127
TauI GCSGC 2 cut(s) 472, 569
Tru1I TTAA 3 cut(s) 150, 668, 1162
Tru9I TTAA 3 cut(s) 150, 668, 1162
TscAI CASTG 3 cut(s) 527, 735, 745
TseFI GTSAC 2 cut(s) 833, 1046
TseI GCWGC 3 cut(s) 413, 440, 974
Tsp45I GTSAC 2 cut(s) 833, 1046
TspDTI ATGAA 4 cut(s) 83, 580, 584, 1124
TspMI CCCGGG 1 cut(s) 451
TspRI CASTG 3 cut(s) 527, 735, 745
VpaK11BI GGWCC 3 cut(s) 208, 733, 771
XceI RCATGY 1 cut(s) 128
XhoI CTCGAG 1 cut(s) 50
XmaI CCCGGG 1 cut(s) 451
XmiI GTMKAC 1 cut(s) 552
XmnI GAANNNNTTC 1 cut(s) 635
XspI CTAG 4 cut(s) 161, 336, 822, 1115
Zsp2I ATGCAT 1 cut(s) 625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.