Prupe.4G223700_v2.0.a1

Indole-3-acetate O-methyltransferase 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
14041027 .. 14044680
3654 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G223700.1

Sequence Viewer

Length: 1158 bp
ATGGCTCCCAAGGGAGACAACGTTGTAGTTTCAAGTATAAAGCTCGAGAAGATATTTAGCATGAAAGGAGGCAAAGGAGAGTCCAGCTATGCCAACAATTCCCAAGCCCAGGCCATACATGCAAGATCCATGCTTCACCTGCTTAAAGAAACCCTAGACAATGTGCAGCTGAGCTCTCCACAAGTCCCCTTTGTGGTTGTGGACCTTGGATGCTCAAGTGGAAGCAACACCATCTACATCATAGATGTGATCATCAAACACATGGCCAAGCGCTATGAGGCCTTGGGATGTGAACCACCTGAGTTCTCAGCCTTTTTCTCTGATCTCCCTAGCAACGACTTCAACACCCTCTTCCAGCTCCTCCCGCCCATGGCCAACCACGGCGGCAGCATGGAGGAGACCCTCGCCGCCGACAGCCACCGCTCCTACTTTGCTGCTGGCGTCCCCGGCTCCTTCTACAGGCGGCTCTTCCCGTCGAGGTCCATTGACCTTTTCCACTCTGCGTTTTCCTTGCATTGGCTCTCGCAGGTGCCAGAGAGTGTGCTAGACAAGAGATCAGCAGCCTACAACAAGGGGAGGGTGTTCATTCATGGAGCAAATGAGAGCACAGCCATTGCATACAAGAAGCAGTTCCAGACAGACTTGGCAAGCTTTCTCAGGTCAAGAGCCAAGGAGCTCAAGAAAGGTGGCTCCATGTTTCTTGTCTGCTTGGGCAGGACCTCAGTGGACCCCACTGACCAAAGTGGCCCAGGCCTTCTCTTTGGAACCCACTTTCAGGATGCTTGGGATGATCTTGTCCAAGAGGGTCTTATCACTAATGAGAAACGTGACAGTTTCAACATTCCTGTGTATGCCTCAAGTTTACAAGACTTCAAGGAAGTAGTGGAAGATGTTGGGTCATTCACCATAAACAAGCTTGAGATTTTCAAAGGAGGAAGCCCCCTTGTAGTGAACCAACCTGATGATGCAGCTGAAGTGGGTCGAGCCCTTGCCAACAGCTGTAGGAGTGTCGCCGGAGTACTCGTGGACGCACACATCGGCGACCACCTTGGCAATGAGTTGTTTGCAAGAGTGGAACAAAGGGGCACAGGCCAATCCAAAGAGCTACTGGAGCAGTTACAATTCCTTCACATAGTGGCATCACTTTCTCTTGCGTAG

Protein Analysis

386

Amino Acids

42.09

Weight (kDa)

5.95

Isoelectric Point (pI)

47.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 147, 517
Acc36I ACCTGC 2 cut(s) 147, 517
AccB1I GGYRCC 1 cut(s) 529
AccBSI CCGCTC 1 cut(s) 423
AciI CCGC 5 cut(s) 365, 384, 408, 421, 463
AclI AACGTT 1 cut(s) 21
AclWI GGATC 1 cut(s) 120
AcoI YGGCCR 2 cut(s) 264, 372
AcuI CTGAAG 1 cut(s) 993
AcyI GRCGYC 1 cut(s) 441
AdeI CACNNNGTG 1 cut(s) 1135
AfaI GTAC 1 cut(s) 1020
AfeI AGCGCT 1 cut(s) 272
AfiI CCNNNNNNNGG 6 cut(s) 109, 193, 370, 459, 516, 775
AgsI TTSAA 5 cut(s) 33, 343, 838, 874, 928
AjnI CCWGG 2 cut(s) 108, 748
Alw21I GWGCWC 3 cut(s) 176, 608, 678
Alw26I GTCTC 2 cut(s) 9, 392
AlwI GGATC 1 cut(s) 120
Ama87I CYCGRG 1 cut(s) 44
Aor51HI AGCGCT 1 cut(s) 272
AoxI GGCC 7 cut(s) 111, 264, 279, 372, 745, 751, 1090
ApeKI GCWGC 5 cut(s) 166, 387, 434, 560, 968
Asp700I GAANNNNTTC 1 cut(s) 629
AspLEI GCGC 1 cut(s) 273
AspS9I GGNCC 5 cut(s) 202, 480, 717, 727, 746
AsuC2I CCSGG 1 cut(s) 447
AsuHPI GGTGA 2 cut(s) 128, 895
AvaI CYCGRG 1 cut(s) 44
AvaII GGWCC 4 cut(s) 202, 480, 717, 727
BaeGI GKGCMC 1 cut(s) 1088
BalI TGGCCA 2 cut(s) 266, 374
BanI GGYRCC 1 cut(s) 529
BanII GRGCYC 3 cut(s) 176, 678, 988
BauI CACGAG 1 cut(s) 1022
Bbv12I GWGCWC 3 cut(s) 176, 608, 678
BbvI GCAGC 5 cut(s) 178, 399, 421, 572, 980
BccI CCATC 1 cut(s) 239
BceAI ACGGC 1 cut(s) 397
BciT130I CCWGG 2 cut(s) 110, 750
BclI TGATCA 1 cut(s) 249
BcnI CCSGG 1 cut(s) 447
BcoDI GTCTC 2 cut(s) 9, 392
BfaI CTAG 3 cut(s) 155, 330, 545
BfmI CTRYAG 2 cut(s) 457, 1000
BfoI RGCGCY 1 cut(s) 274
BfuAI ACCTGC 2 cut(s) 147, 517
BisI GCNGC 8 cut(s) 167, 385, 388, 408, 435, 464, 561, 969
BlpI GCTNAGC 1 cut(s) 170
BlsI GCNGC 8 cut(s) 168, 386, 389, 409, 436, 465, 562, 970
BmcAI AGTACT 1 cut(s) 1020
Bme1390I CCNGG 3 cut(s) 110, 447, 750
Bme18I GGWCC 4 cut(s) 202, 480, 717, 727
BmeT110I CYCGRG 1 cut(s) 44
BmgT120I GGNCC 5 cut(s) 202, 480, 717, 727, 746
BmiI GGNNCC 6 cut(s) 6, 451, 531, 691, 729, 766
BmrFI CCNGG 3 cut(s) 110, 447, 750
BmsI GCATC 4 cut(s) 200, 769, 955, 1148
BpmI CTGGAG 1 cut(s) 1130
Bpu1102I GCTNAGC 1 cut(s) 170
BpuEI CTTGAG 4 cut(s) 199, 662, 841, 938
BpuMI CCSGG 1 cut(s) 447
BsaHI GRCGYC 1 cut(s) 441
BsaI GGTCTC 1 cut(s) 392
BsaXI ACNNNNNCTCC 4 cut(s) 6, 36, 1008, 1038
Bsc4I CCNNNNNNNGG 6 cut(s) 109, 193, 370, 459, 516, 775
Bse1I ACTGG 1 cut(s) 1113
Bse3DI GCAATG 2 cut(s) 612, 1060
BseBI CCWGG 2 cut(s) 110, 750
BseGI GGATG 4 cut(s) 215, 293, 784, 793
BseLI CCNNNNNNNGG 6 cut(s) 109, 193, 370, 459, 516, 775
BseMI GCAATG 2 cut(s) 612, 1060
BseMII CTCAG 5 cut(s) 161, 291, 321, 670, 735
BseNI ACTGG 1 cut(s) 1113
BseRI GAGGAG 2 cut(s) 350, 410
BseSI GKGCMC 1 cut(s) 1088
BseXI GCAGC 5 cut(s) 178, 399, 421, 572, 980
BsgI GTGCAG 1 cut(s) 185
BshFI GGCC 7 cut(s) 113, 266, 281, 374, 747, 753, 1092
BshNI GGYRCC 1 cut(s) 529
BsiHKAI GWGCWC 3 cut(s) 176, 608, 678
BsiHKCI CYCGRG 1 cut(s) 44
BsiSI CCGG 2 cut(s) 447, 1014
BslFI GGGAC 2 cut(s) 170, 428
BslI CCNNNNNNNGG 6 cut(s) 109, 193, 370, 459, 516, 775
BsmAI GTCTC 2 cut(s) 9, 392
BsmFI GGGAC 2 cut(s) 170, 428
BsnI GGCC 7 cut(s) 113, 266, 281, 374, 747, 753, 1092
Bso31I GGTCTC 1 cut(s) 392
BsoBI CYCGRG 1 cut(s) 44
Bsp1286I GDGCHC 5 cut(s) 176, 608, 678, 988, 1088
Bsp143I GATC 5 cut(s) 125, 249, 322, 554, 790
Bsp1720I GCTNAGC 1 cut(s) 170
Bsp19I CCATGG 1 cut(s) 369
BspACI CCGC 5 cut(s) 365, 384, 408, 421, 463
BspANI GGCC 7 cut(s) 113, 266, 281, 374, 747, 753, 1092
BspCNI CTCAG 5 cut(s) 162, 292, 320, 669, 734
BspLI GGNNCC 6 cut(s) 6, 451, 531, 691, 729, 766
BspMI ACCTGC 2 cut(s) 147, 517
BspPI GGATC 1 cut(s) 120
BspQI GCTCTTC 1 cut(s) 473
BspT107I GGYRCC 1 cut(s) 529
BspTNI GGTCTC 1 cut(s) 392
BsrBI CCGCTC 1 cut(s) 423
BsrDI GCAATG 2 cut(s) 612, 1060
BsrI ACTGG 1 cut(s) 1113
BssMI GATC 5 cut(s) 125, 249, 322, 554, 790
BssNI GRCGYC 1 cut(s) 441
BssSI CACGAG 1 cut(s) 1022
BssT1I CCWWGG 6 cut(s) 9, 205, 282, 369, 669, 1048
Bst2BI CACGAG 1 cut(s) 1022
Bst2UI CCWGG 2 cut(s) 110, 750
Bst4CI ACNGT 1 cut(s) 833
Bst6I CTCTTC 2 cut(s) 356, 473
BstACI GRCGYC 1 cut(s) 441
BstC8I GCNNGC 2 cut(s) 439, 649
BstDEI CTNAG 5 cut(s) 170, 300, 307, 656, 721
BstDSI CCRYGG 2 cut(s) 369, 379
BstENI CCTNNNNNAGG 1 cut(s) 457
BstF5I GGATG 4 cut(s) 215, 293, 784, 793
BstH2I RGCGCY 1 cut(s) 274
BstHHI GCGC 1 cut(s) 273
BstKTI GATC 5 cut(s) 128, 252, 325, 557, 793
BstMAI GTCTC 2 cut(s) 9, 392
BstMBI GATC 5 cut(s) 125, 249, 322, 554, 790
BstMWI GCNNNNNNNGC 5 cut(s) 119, 139, 364, 447, 1111
BstNI CCWGG 2 cut(s) 110, 750
BstNSI RCATGY 1 cut(s) 122
BstSCI CCNGG 3 cut(s) 108, 445, 748
BstSFI CTRYAG 2 cut(s) 457, 1000
BstSLI GKGCMC 1 cut(s) 1088
BstV1I GCAGC 5 cut(s) 178, 399, 421, 572, 980
BstX2I RGATCY 1 cut(s) 125
BstYI RGATCY 1 cut(s) 125
BsuRI GGCC 7 cut(s) 113, 266, 281, 374, 747, 753, 1092
BtgI CCRYGG 2 cut(s) 369, 379
BtsCI GGATG 4 cut(s) 215, 293, 784, 793
BtsIMutI CAGTG 2 cut(s) 729, 732
BveI ACCTGC 2 cut(s) 147, 517
Cac8I GCNNGC 2 cut(s) 439, 649
CfoI GCGC 1 cut(s) 273
Cfr13I GGNCC 5 cut(s) 202, 480, 717, 727, 746
CseI GACGC 2 cut(s) 430, 1037
Csp6I GTAC 1 cut(s) 1019
CspCI CAANNNNNGTGG 2 cut(s) 667, 702
CviAII CATG 8 cut(s) 61, 119, 130, 262, 370, 391, 590, 694
CviQI GTAC 1 cut(s) 1019
DdeI CTNAG 5 cut(s) 170, 300, 307, 656, 721
DpnI GATC 5 cut(s) 127, 251, 324, 556, 792
DpnII GATC 5 cut(s) 125, 249, 322, 554, 790
DraIII CACNNNGTG 1 cut(s) 1135
EaeI YGGCCR 2 cut(s) 264, 372
Eam1104I CTCTTC 2 cut(s) 356, 473
EarI CTCTTC 2 cut(s) 356, 473
Ecl136II GAGCTC 2 cut(s) 174, 676
Eco130I CCWWGG 6 cut(s) 9, 205, 282, 369, 669, 1048
Eco147I AGGCCT 2 cut(s) 281, 753
Eco24I GRGCYC 3 cut(s) 176, 678, 988
Eco31I GGTCTC 1 cut(s) 392
Eco47I GGWCC 4 cut(s) 202, 480, 717, 727
Eco47III AGCGCT 1 cut(s) 272
Eco53kI GAGCTC 2 cut(s) 174, 676
Eco57I CTGAAG 1 cut(s) 993
Eco88I CYCGRG 1 cut(s) 44
EcoICRI GAGCTC 2 cut(s) 174, 676
EcoNI CCTNNNNNAGG 1 cut(s) 457
EcoO109I RGGNCCY 1 cut(s) 717
EcoRII CCWGG 2 cut(s) 108, 748
EcoT14I CCWWGG 6 cut(s) 9, 205, 282, 369, 669, 1048
EcoT38I GRGCYC 3 cut(s) 176, 678, 988
ErhI CCWWGG 6 cut(s) 9, 205, 282, 369, 669, 1048
FaeI CATG 8 cut(s) 64, 122, 133, 265, 373, 394, 593, 697
FalI AAGNNNNNCTT 2 cut(s) 792, 824
FaqI GGGAC 2 cut(s) 170, 428
FatI CATG 8 cut(s) 60, 118, 129, 261, 369, 390, 589, 693
FauI CCCGC 1 cut(s) 372
FbaI TGATCA 1 cut(s) 249
Fnu4HI GCNGC 8 cut(s) 167, 385, 388, 408, 435, 464, 561, 969
FokI GGATG 4 cut(s) 222, 300, 791, 800
FriOI GRGCYC 3 cut(s) 176, 678, 988
Fsp4HI GCNGC 8 cut(s) 167, 385, 388, 408, 435, 464, 561, 969
FspBI CTAG 3 cut(s) 155, 330, 545
GlaI GCGC 1 cut(s) 272
GluI GCNGC 8 cut(s) 167, 385, 388, 408, 435, 464, 561, 969
GsuI CTGGAG 1 cut(s) 1130
HaeII RGCGCY 1 cut(s) 274
HaeIII GGCC 7 cut(s) 113, 266, 281, 374, 747, 753, 1092
HapII CCGG 2 cut(s) 447, 1014
HgaI GACGC 2 cut(s) 430, 1037
HhaI GCGC 1 cut(s) 273
Hin1I GRCGYC 1 cut(s) 441
Hin1II CATG 8 cut(s) 64, 122, 133, 265, 373, 394, 593, 697
Hin6I GCGC 1 cut(s) 271
HinP1I GCGC 1 cut(s) 271
HindIII AAGCTT 2 cut(s) 649, 914
HinfI GANTC 1 cut(s) 80
HpaII CCGG 2 cut(s) 447, 1014
HphI GGTGA 2 cut(s) 128, 895
Hpy166II GTNNAC 6 cut(s) 202, 293, 727, 863, 952, 1027
Hpy188I TCNGA 1 cut(s) 322
Hpy188III TCNNGA 5 cut(s) 46, 634, 663, 679, 776
Hpy8I GTNNAC 6 cut(s) 202, 293, 727, 863, 952, 1027
Hpy99I CGWCG 1 cut(s) 478
HpyAV CCTTC 3 cut(s) 463, 764, 1136
HpyCH4III ACNGT 1 cut(s) 833
HpyCH4IV ACGT 2 cut(s) 21, 826
HpyCH4V TGCA 6 cut(s) 122, 166, 514, 617, 968, 1067
HpyF10VI GCNNNNNNNGC 5 cut(s) 119, 139, 364, 447, 1111
HpyF3I CTNAG 5 cut(s) 170, 300, 307, 656, 721
HpySE526I ACGT 2 cut(s) 21, 826
Hsp92I GRCGYC 1 cut(s) 441
Hsp92II CATG 8 cut(s) 64, 122, 133, 265, 373, 394, 593, 697
HspAI GCGC 1 cut(s) 271
Ksp22I TGATCA 1 cut(s) 249
Kzo9I GATC 5 cut(s) 125, 249, 322, 554, 790
LguI GCTCTTC 1 cut(s) 473
LmnI GCTCC 8 cut(s) 10, 363, 428, 455, 593, 673, 695, 1111
Lsp1109I GCAGC 5 cut(s) 178, 399, 421, 572, 980
LweI GCATC 4 cut(s) 200, 769, 955, 1148
MaeI CTAG 3 cut(s) 155, 330, 545
MaeII ACGT 2 cut(s) 21, 826
MaeIII GTNAC 2 cut(s) 827, 1116
MalI GATC 5 cut(s) 127, 251, 324, 556, 792
MbiI CCGCTC 1 cut(s) 423
MboI GATC 5 cut(s) 125, 249, 322, 554, 790
MboII GAAGA 4 cut(s) 61, 343, 460, 899
MflI RGATCY 1 cut(s) 125
MhlI GDGCHC 5 cut(s) 176, 608, 678, 988, 1088
MlsI TGGCCA 2 cut(s) 266, 374
MluCI AATT 2 cut(s) 97, 1121
MluNI TGGCCA 2 cut(s) 266, 374
MlyI GAGTC 1 cut(s) 89
Mox20I TGGCCA 2 cut(s) 266, 374
MroXI GAANNNNTTC 1 cut(s) 629
MscI TGGCCA 2 cut(s) 266, 374
MseI TTAA 1 cut(s) 144
MslI CAYNNNNRTG 2 cut(s) 245, 845
Msp20I TGGCCA 2 cut(s) 266, 374
MspA1I CMGCKG 3 cut(s) 169, 971, 999
MspI CCGG 2 cut(s) 447, 1014
MspR9I CCNGG 3 cut(s) 110, 447, 750
MvaI CCWGG 2 cut(s) 110, 750
MwoI GCNNNNNNNGC 5 cut(s) 119, 139, 364, 447, 1111
NciI CCSGG 1 cut(s) 447
NcoI CCATGG 1 cut(s) 369
NdeII GATC 5 cut(s) 125, 249, 322, 554, 790
NlaIII CATG 8 cut(s) 64, 122, 133, 265, 373, 394, 593, 697
NlaIV GGNNCC 6 cut(s) 6, 451, 531, 691, 729, 766
NmuCI GTSAC 1 cut(s) 827
NspI RCATGY 1 cut(s) 122
PaeR7I CTCGAG 1 cut(s) 44
PaqCI CACCTGC 2 cut(s) 147, 517
PceI AGGCCT 2 cut(s) 281, 753
PciSI GCTCTTC 1 cut(s) 473
PdmI GAANNNNTTC 1 cut(s) 629
PkrI GCNGC 8 cut(s) 168, 386, 389, 409, 436, 465, 562, 970
PleI GAGTC 1 cut(s) 88
PpsI GAGTC 1 cut(s) 88
PpuMI RGGWCCY 1 cut(s) 717
Psp124BI GAGCTC 2 cut(s) 176, 678
Psp1406I AACGTT 1 cut(s) 21
Psp5II RGGWCCY 1 cut(s) 717
Psp6I CCWGG 2 cut(s) 108, 748
PspGI CCWGG 2 cut(s) 108, 748
PspN4I GGNNCC 6 cut(s) 6, 451, 531, 691, 729, 766
PspPI GGNCC 5 cut(s) 202, 480, 717, 727, 746
PspPPI RGGWCCY 1 cut(s) 717
PsuI RGATCY 1 cut(s) 125
PvuII CAGCTG 3 cut(s) 169, 971, 999
RsaI GTAC 1 cut(s) 1020
RsaNI GTAC 1 cut(s) 1019
RseI CAYNNNNRTG 2 cut(s) 245, 845
SacI GAGCTC 2 cut(s) 176, 678
SapI GCTCTTC 1 cut(s) 473
SaqAI TTAA 1 cut(s) 144
SatI GCNGC 8 cut(s) 167, 385, 388, 408, 435, 464, 561, 969
Sau3AI GATC 5 cut(s) 125, 249, 322, 554, 790
Sau96I GGNCC 5 cut(s) 202, 480, 717, 727, 746
ScaI AGTACT 1 cut(s) 1020
SchI GAGTC 1 cut(s) 89
ScrFI CCNGG 3 cut(s) 110, 447, 750
SduI GDGCHC 5 cut(s) 176, 608, 678, 988, 1088
SfaNI GCATC 4 cut(s) 200, 769, 955, 1148
SfcI CTRYAG 2 cut(s) 457, 1000
Sfr274I CTCGAG 1 cut(s) 44
SinI GGWCC 4 cut(s) 202, 480, 717, 727
SlaI CTCGAG 1 cut(s) 44
SmiMI CAYNNNNRTG 2 cut(s) 245, 845
SmlI CTYRAG 5 cut(s) 44, 214, 677, 856, 917
SmoI CTYRAG 5 cut(s) 44, 214, 677, 856, 917
Sse9I AATT 2 cut(s) 97, 1121
SseBI AGGCCT 2 cut(s) 281, 753
SsiI CCGC 5 cut(s) 365, 384, 408, 421, 463
SspMI CTAG 3 cut(s) 155, 330, 545
SstI GAGCTC 2 cut(s) 176, 678
StuI AGGCCT 2 cut(s) 281, 753
StyD4I CCNGG 3 cut(s) 108, 445, 748
StyI CCWWGG 6 cut(s) 9, 205, 282, 369, 669, 1048
TaaI ACNGT 1 cut(s) 833
TaiI ACGT 2 cut(s) 24, 829
TaqI TCGA 3 cut(s) 45, 476, 982
TasI AATT 2 cut(s) 97, 1121
TatI WGTACW 1 cut(s) 1018
TauI GCSGC 3 cut(s) 387, 410, 466
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
TscAI CASTG 2 cut(s) 729, 739
TseFI GTSAC 1 cut(s) 827
TseI GCWGC 5 cut(s) 166, 387, 434, 560, 968
Tsp45I GTSAC 1 cut(s) 827
TspDTI ATGAA 3 cut(s) 77, 574, 578
TspRI CASTG 2 cut(s) 729, 739
VpaK11BI GGWCC 4 cut(s) 202, 480, 717, 727
XagI CCTNNNNNAGG 1 cut(s) 457
XceI RCATGY 1 cut(s) 122
XcmI CCANNNNNNNNNTGG 1 cut(s) 1105
XhoI CTCGAG 1 cut(s) 44
XmnI GAANNNNTTC 1 cut(s) 629
XspI CTAG 3 cut(s) 155, 330, 545
ZrmI AGTACT 1 cut(s) 1020
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.