Prupe.2G272700_v2.0.a1

Putative serine esterase (DUF676)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
27579605 .. 27583630
4026 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G272700.1

Sequence Viewer

Length: 1083 bp
ATGCAAAACGGCGTCGTAGAGAACGGGGTTTGCTCGTCCGCGTCGGTGAATGGGAGTCACGATGTCTGGAGTTCTAATGAGTCCGATTCTTCCTCTGCTGACCATCTCGTTGTAATGGTCCATGGAATTATGGGAAGTGCGGCAGATTGGAAGTTTGGAGCGGAGCAATTTGTTAAAATGCTTCCTGACAAAGTATTTGTTCATTGTAGTGAACGGAATGGTTCTAGGCTGACTCTGGATGGTGTGGATGTAATGGGGGAGCGATTGACAGAGGAGGTTGTCGAACTGACTCAAAGAAAGCCAAATCTACGTAAGATCTCGTTCATTGGACATTCTGTGGGAGGACTAGTGGCAAGATATGCAATTGGGAGGCTATATAGACCCCCTAAAAATGAAAATTCGGAACATTCATCTCCTAATGGGAGTGAAGAGGATCCAAGGAGTACGCTATGTGGCTTGGAGCCTATGAACTTTATTACTGTTGCTACACCTCATCTTGGCTCAAGAGGTAACAAGCAGGTACCATTTCTTTTTGGTGTGCCTGCCTTTGAAAAGGTTGCTAGTGCGGTCATTCATTTGATATTTAGGAGAACGGGTAGGCATCTTTTTCTTAATGACGACGACGATGGAAAGCCTCCGCTGCTTAAACGCATGATAGAGGATTATGATGAATGTTACTTCATGTCTGCGTTGCGTAGTTTTAGACGTAGGGTGGTGTATTCAAATGTGGGCTATGACCATATTGTTGGCTGGAGAACATCATCTATTAGACGTAACAGTGAACTGCCAAAGTGGGAGGATACTGTTGATGAAAAATATCCACATATTGTTTATGAAGAACATTGTAAGGCCTATGATGCTGAGCAGTGCGAGCCTACTTCAGTGGAAAATGATGGCTCTGACAAGCTTGAAGTGGAACTATTGACAGGCCTATCTCGTGTGTGCTGGGAAAAAGTAGATGTTAGCTTCCACTGCAGCAGACATAGATTTGCTGCTCATAGTGTCATTCAGGTCAAAGATCAAAGCGTACATATAGAAGGTGAAGATGTCATACGTCATATGATTGATCGTTTCCTCAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

361

Amino Acids

40.69

Weight (kDa)

5.94

Isoelectric Point (pI)

46.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015180)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G51180 AT5G51180
fragaria_vesca FvH4_7g26960
malus_domestica MD01G1177400.v1.1 MD07G1249100.v1.1
prunus_persica Prupe.2G272700_v2.0.a1
pyrus_communis pycom01g18790 pycom07g22230
rosa_chinensis RchiOBHm_Chr1g0373671
rosa_laevigata RLG00000026808
rosa_roxburghii Rroxscaffold_4G00284070
rosa_rugosa Rorug01G0378900
rosa_samantha Rh1AG388300 Rh1CG365600 Rh1DG383100
rosa_wichuraiana Rw1G034690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 508
Acc65I GGTACC 1 cut(s) 520
AccB1I GGYRCC 1 cut(s) 520
AccBSI CCGCTC 1 cut(s) 161
AccII CGCG 1 cut(s) 41
AciI CCGC 5 cut(s) 39, 140, 161, 566, 638
AclWI GGATC 2 cut(s) 428, 441
AcsI RAATTY 1 cut(s) 397
AcuI CTGAAG 1 cut(s) 864
AcyI GRCGYC 1 cut(s) 12
AfaI GTAC 3 cut(s) 445, 522, 1029
AfiI CCNNNNNNNGG 1 cut(s) 497
AgsI TTSAA 3 cut(s) 551, 723, 911
AhlI ACTAGT 1 cut(s) 346
AluBI AGCT 2 cut(s) 907, 966
AluI AGCT 2 cut(s) 907, 966
AlwI GGATC 2 cut(s) 428, 441
AoxI GGCC 2 cut(s) 849, 928
ApeKI GCWGC 3 cut(s) 640, 975, 992
ApoI RAATTY 1 cut(s) 397
ArsI GACNNNNNNTTYG 2 cut(s) 179, 211
Asp718I GGTACC 1 cut(s) 520
AspS9I GGNCC 1 cut(s) 118
AsuHPI GGTGA 2 cut(s) 58, 1052
AvaII GGWCC 1 cut(s) 118
BamHI GGATCC 1 cut(s) 433
BanI GGYRCC 1 cut(s) 520
BarI GAAGNNNNNNTAC 2 cut(s) 1035, 1067
BauI CACGAG 1 cut(s) 936
BbvI GCAGC 3 cut(s) 627, 979, 987
BccI CCATC 4 cut(s) 111, 233, 620, 887
BceAI ACGGC 1 cut(s) 25
BciVI GTATCC 1 cut(s) 793
BcuI ACTAGT 1 cut(s) 346
BfaI CTAG 3 cut(s) 225, 347, 561
BfmI CTRYAG 1 cut(s) 973
BfuAI ACCTGC 1 cut(s) 508
BfuI GTATCC 1 cut(s) 793
BglII AGATCT 1 cut(s) 315
BisI GCNGC 4 cut(s) 141, 641, 976, 993
BlpI GCTNAGC 1 cut(s) 861
BlsI GCNGC 4 cut(s) 142, 642, 977, 994
Bme18I GGWCC 1 cut(s) 118
BmgT120I GGNCC 1 cut(s) 118
BmiI GGNNCC 3 cut(s) 435, 462, 522
BmsI GCATC 2 cut(s) 610, 847
BpmI CTGGAG 2 cut(s) 88, 772
Bpu1102I GCTNAGC 1 cut(s) 861
BpuEI CTTGAG 1 cut(s) 487
BsaAI YACGTR 1 cut(s) 311
BsaHI GRCGYC 1 cut(s) 12
BsaJI CCNNGG 2 cut(s) 121, 437
BsaXI ACNNNNNCTCC 4 cut(s) 333, 363, 580, 610
Bsc4I CCNNNNNNNGG 1 cut(s) 497
BseDI CCNNGG 2 cut(s) 121, 437
BseGI GGATG 2 cut(s) 244, 253
BseLI CCNNNNNNNGG 1 cut(s) 497
BseMII CTCAG 1 cut(s) 852
BseRI GAGGAG 1 cut(s) 287
BseXI GCAGC 3 cut(s) 627, 979, 987
BseYI CCCAGC 1 cut(s) 945
Bsh1236I CGCG 1 cut(s) 41
BshFI GGCC 2 cut(s) 851, 930
BshNI GGYRCC 1 cut(s) 520
BslI CCNNNNNNNGG 1 cut(s) 497
BsnI GGCC 2 cut(s) 851, 930
Bsp143I GATC 4 cut(s) 315, 433, 1018, 1066
Bsp1720I GCTNAGC 1 cut(s) 861
Bsp19I CCATGG 1 cut(s) 121
BspACI CCGC 5 cut(s) 39, 140, 161, 566, 638
BspANI GGCC 2 cut(s) 851, 930
BspCNI CTCAG 1 cut(s) 853
BspFNI CGCG 1 cut(s) 41
BspLI GGNNCC 3 cut(s) 435, 462, 522
BspMAI CTGCAG 1 cut(s) 977
BspMI ACCTGC 1 cut(s) 508
BspPI GGATC 2 cut(s) 428, 441
BspT107I GGYRCC 1 cut(s) 520
BsrBI CCGCTC 1 cut(s) 161
BssECI CCNNGG 2 cut(s) 121, 437
BssMI GATC 4 cut(s) 315, 433, 1018, 1066
BssNI GRCGYC 1 cut(s) 12
BssSI CACGAG 1 cut(s) 936
BssT1I CCWWGG 2 cut(s) 121, 437
Bst2BI CACGAG 1 cut(s) 936
Bst4CI ACNGT 3 cut(s) 481, 779, 805
Bst6I CTCTTC 1 cut(s) 423
BstACI GRCGYC 1 cut(s) 12
BstAPI GCANNNNNTGC 1 cut(s) 359
BstBAI YACGTR 1 cut(s) 311
BstC8I GCNNGC 2 cut(s) 543, 872
BstDEI CTNAG 1 cut(s) 861
BstDSI CCRYGG 1 cut(s) 121
BstF5I GGATG 2 cut(s) 244, 253
BstFNI CGCG 1 cut(s) 41
BstKTI GATC 4 cut(s) 318, 436, 1021, 1069
BstMBI GATC 4 cut(s) 315, 433, 1018, 1066
BstMWI GCNNNNNNNGC 5 cut(s) 359, 640, 857, 871, 972
BstSFI CTRYAG 1 cut(s) 973
BstSNI TACGTA 1 cut(s) 311
BstUI CGCG 1 cut(s) 41
BstV1I GCAGC 3 cut(s) 627, 979, 987
BstX2I RGATCY 2 cut(s) 315, 433
BstXI CCANNNNNNTGG 1 cut(s) 746
BstYI RGATCY 2 cut(s) 315, 433
BsuI GTATCC 1 cut(s) 793
BsuRI GGCC 2 cut(s) 851, 930
BtgI CCRYGG 1 cut(s) 121
BtsCI GGATG 2 cut(s) 244, 253
BtsI GCAGTG 2 cut(s) 872, 970
BtsIMutI CAGTG 4 cut(s) 784, 872, 888, 970
BveI ACCTGC 1 cut(s) 508
Cac8I GCNNGC 2 cut(s) 543, 872
Cfr13I GGNCC 1 cut(s) 118
CseI GACGC 1 cut(s) 30
Csp6I GTAC 3 cut(s) 444, 521, 1028
CviAII CATG 3 cut(s) 122, 652, 682
CviQI GTAC 3 cut(s) 444, 521, 1028
DdeI CTNAG 1 cut(s) 861
DpnI GATC 4 cut(s) 317, 435, 1020, 1068
DpnII GATC 4 cut(s) 315, 433, 1018, 1066
Eam1104I CTCTTC 1 cut(s) 423
EarI CTCTTC 1 cut(s) 423
Eco105I TACGTA 1 cut(s) 311
Eco130I CCWWGG 2 cut(s) 121, 437
Eco147I AGGCCT 2 cut(s) 851, 930
Eco47I GGWCC 1 cut(s) 118
Eco57I CTGAAG 1 cut(s) 864
EcoT14I CCWWGG 2 cut(s) 121, 437
ErhI CCWWGG 2 cut(s) 121, 437
FaeI CATG 3 cut(s) 125, 655, 685
FatI CATG 3 cut(s) 121, 651, 681
FauNDI CATATG 1 cut(s) 1059
Fnu4HI GCNGC 4 cut(s) 141, 641, 976, 993
FokI GGATG 2 cut(s) 251, 260
Fsp4HI GCNGC 4 cut(s) 141, 641, 976, 993
FspBI CTAG 3 cut(s) 225, 347, 561
GluI GCNGC 4 cut(s) 141, 641, 976, 993
GsaI CCCAGC 1 cut(s) 949
GsuI CTGGAG 2 cut(s) 88, 772
HaeIII GGCC 2 cut(s) 851, 930
HgaI GACGC 1 cut(s) 30
Hin1I GRCGYC 1 cut(s) 12
Hin1II CATG 3 cut(s) 125, 655, 685
HindIII AAGCTT 1 cut(s) 905
HinfI GANTC 5 cut(s) 55, 80, 86, 232, 289
HphI GGTGA 2 cut(s) 58, 1052
Hpy166II GTNNAC 2 cut(s) 212, 782
Hpy188I TCNGA 3 cut(s) 85, 403, 901
Hpy188III TCNNGA 5 cut(s) 59, 67, 185, 236, 504
Hpy8I GTNNAC 2 cut(s) 212, 782
Hpy99I CGWCG 4 cut(s) 17, 46, 623, 626
HpyAV CCTTC 1 cut(s) 1031
HpyCH4III ACNGT 3 cut(s) 481, 779, 805
HpyCH4IV ACGT 4 cut(s) 310, 706, 772, 1054
HpyCH4V TGCA 3 cut(s) 4, 362, 975
HpyF10VI GCNNNNNNNGC 5 cut(s) 359, 640, 857, 871, 972
HpyF3I CTNAG 1 cut(s) 861
HpySE526I ACGT 4 cut(s) 310, 706, 772, 1054
Hsp92I GRCGYC 1 cut(s) 12
Hsp92II CATG 3 cut(s) 125, 655, 685
KpnI GGTACC 1 cut(s) 524
Kzo9I GATC 4 cut(s) 315, 433, 1018, 1066
LmnI GCTCC 4 cut(s) 158, 163, 259, 460
LpnPI CCDG 9 cut(s) 52, 198, 221, 503, 555, 736, 912, 931, 995
Lsp1109I GCAGC 3 cut(s) 627, 979, 987
LweI GCATC 2 cut(s) 610, 847
MaeI CTAG 3 cut(s) 225, 347, 561
MaeII ACGT 4 cut(s) 310, 706, 772, 1054
MaeIII GTNAC 4 cut(s) 56, 509, 674, 773
MalI GATC 4 cut(s) 317, 435, 1020, 1068
MbiI CCGCTC 1 cut(s) 161
MboI GATC 4 cut(s) 315, 433, 1018, 1066
MboII GAAGA 4 cut(s) 81, 440, 848, 1055
MfeI CAATTG 1 cut(s) 363
MflI RGATCY 2 cut(s) 315, 433
MluCI AATT 4 cut(s) 126, 167, 363, 397
MlyI GAGTC 4 cut(s) 64, 89, 226, 283
MseI TTAA 3 cut(s) 174, 612, 645
MslI CAYNNNNRTG 1 cut(s) 207
MspA1I CMGCKG 1 cut(s) 640
MunI CAATTG 1 cut(s) 363
MvnI CGCG 1 cut(s) 41
MwoI GCNNNNNNNGC 5 cut(s) 359, 640, 857, 871, 972
NcoI CCATGG 1 cut(s) 121
NdeI CATATG 1 cut(s) 1059
NdeII GATC 4 cut(s) 315, 433, 1018, 1066
NlaIII CATG 3 cut(s) 125, 655, 685
NlaIV GGNNCC 3 cut(s) 435, 462, 522
NmuCI GTSAC 1 cut(s) 56
PceI AGGCCT 2 cut(s) 851, 930
PfeI GAWTC 1 cut(s) 86
PkrI GCNGC 4 cut(s) 142, 642, 977, 994
PleI GAGTC 4 cut(s) 63, 88, 226, 283
PpsI GAGTC 4 cut(s) 63, 88, 226, 283
Ppu21I YACGTR 1 cut(s) 311
PspFI CCCAGC 1 cut(s) 945
PspN4I GGNNCC 3 cut(s) 435, 462, 522
PspPI GGNCC 1 cut(s) 118
PstI CTGCAG 1 cut(s) 977
PsuI RGATCY 2 cut(s) 315, 433
RsaI GTAC 3 cut(s) 445, 522, 1029
RsaNI GTAC 3 cut(s) 444, 521, 1028
RseI CAYNNNNRTG 1 cut(s) 207
SaqAI TTAA 3 cut(s) 174, 612, 645
SatI GCNGC 4 cut(s) 141, 641, 976, 993
Sau3AI GATC 4 cut(s) 315, 433, 1018, 1066
Sau96I GGNCC 1 cut(s) 118
SchI GAGTC 4 cut(s) 64, 89, 226, 283
SfaNI GCATC 2 cut(s) 610, 847
SfcI CTRYAG 1 cut(s) 973
SinI GGWCC 1 cut(s) 118
SmiMI CAYNNNNRTG 1 cut(s) 207
SmlI CTYRAG 1 cut(s) 502
SmoI CTYRAG 1 cut(s) 502
SnaBI TACGTA 1 cut(s) 311
SpeI ACTAGT 1 cut(s) 346
Sse9I AATT 4 cut(s) 126, 167, 363, 397
SseBI AGGCCT 2 cut(s) 851, 930
SsiI CCGC 5 cut(s) 39, 140, 161, 566, 638
SspMI CTAG 3 cut(s) 225, 347, 561
StuI AGGCCT 2 cut(s) 851, 930
StyI CCWWGG 2 cut(s) 121, 437
TaaI ACNGT 3 cut(s) 481, 779, 805
TaiI ACGT 4 cut(s) 313, 709, 775, 1057
TaqI TCGA 1 cut(s) 282
TasI AATT 4 cut(s) 126, 167, 363, 397
TauI GCSGC 1 cut(s) 143
TfiI GAWTC 1 cut(s) 86
Tru1I TTAA 3 cut(s) 174, 612, 645
Tru9I TTAA 3 cut(s) 174, 612, 645
TscAI CASTG 4 cut(s) 784, 872, 888, 977
TseFI GTSAC 1 cut(s) 56
TseI GCWGC 3 cut(s) 640, 975, 992
Tsp45I GTSAC 1 cut(s) 56
TspGWI ACGGA 1 cut(s) 229
TspRI CASTG 4 cut(s) 784, 872, 888, 977
VpaK11BI GGWCC 1 cut(s) 118
XapI RAATTY 1 cut(s) 397
XspI CTAG 3 cut(s) 225, 347, 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.