Rorug01G0378900

Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0008946
Physical Location & Seq
Reverse (-)
49216702 .. 49219143
2442 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0378900.1

Sequence Viewer

Length: 258 bp
ATGGCTGAGGCAGTAGTTAACGTTCTCCTAGAGCGTCTGGCAACGATTGCCCTTGACAAGGTCGGACAAGAGCTAAAATTGGTGGTTGGGGTTAAGAAAGAAGTCAAGAGCCTCACCCGCAATCTCGAAGCTATTCAAGCTGTGCTGCAGGATGCAGAGCAGAGGCAAGTGACGGAAGCCACAGTGAGACATTGGCTTAGTGAACTGACTGAAGTTTCATGGATGATGTGTTGGATGAGTGGATCACGGAAGATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0003872 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008443 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009507 GO:0009536 GO:0009987 GO:0016052 GO:0016053 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019200 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0032787 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042866 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044262 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046835 GO:0046939 GO:0051186 GO:0051188 GO:0055086 GO:0061615 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00030 ko00051 ko00052 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko03018 ko04152 ko05230 map00010 map00030 map00051 map00052 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map03018 map04152 map05230
Pfam Domains
Protein Families
PFK

Protein Analysis

85

Amino Acids

9.61

Weight (kDa)

6.57

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 73 1.4e-16 Rx N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 118
AclI AACGTT 1 cut(s) 21
AclWI GGATC 1 cut(s) 250
AcuI CTGAAG 1 cut(s) 231
AfiI CCNNNNNNNGG 1 cut(s) 58
AgsI TTSAA 1 cut(s) 137
AluBI AGCT 3 cut(s) 73, 131, 140
AluI AGCT 3 cut(s) 73, 131, 140
Alw26I GTCTC 1 cut(s) 181
AlwI GGATC 1 cut(s) 250
ApeKI GCWGC 1 cut(s) 145
Asp700I GAANNNNTTC 1 cut(s) 132
AsuHPI GGTGA 1 cut(s) 106
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 1 cut(s) 132
BcoDI GTCTC 1 cut(s) 181
BfaI CTAG 1 cut(s) 29
BfmI CTRYAG 1 cut(s) 146
BglII AGATCT 1 cut(s) 252
BisI GCNGC 1 cut(s) 146
BlsI GCNGC 1 cut(s) 147
BmsI GCATC 1 cut(s) 142
Bpu10I CCTNAGC 1 cut(s) 6
Bsc4I CCNNNNNNNGG 1 cut(s) 58
BseGI GGATG 3 cut(s) 157, 228, 240
BseLI CCNNNNNNNGG 1 cut(s) 58
BseXI GCAGC 1 cut(s) 132
BslI CCNNNNNNNGG 1 cut(s) 58
BsmAI GTCTC 1 cut(s) 181
Bsp143I GATC 2 cut(s) 242, 252
BspACI CCGC 1 cut(s) 118
BspMAI CTGCAG 1 cut(s) 150
BspPI GGATC 1 cut(s) 250
BssMI GATC 2 cut(s) 242, 252
Bst4CI ACNGT 1 cut(s) 184
BstAPI GCANNNNNTGC 1 cut(s) 47
BstDEI CTNAG 2 cut(s) 6, 197
BstENI CCTNNNNNAGG 1 cut(s) 56
BstF5I GGATG 3 cut(s) 157, 228, 240
BstKTI GATC 2 cut(s) 245, 255
BstMAI GTCTC 1 cut(s) 181
BstMBI GATC 2 cut(s) 242, 252
BstMWI GCNNNNNNNGC 3 cut(s) 47, 117, 137
BstSFI CTRYAG 1 cut(s) 146
BstV1I GCAGC 1 cut(s) 132
BstX2I RGATCY 1 cut(s) 252
BstYI RGATCY 1 cut(s) 252
BtsCI GGATG 3 cut(s) 157, 228, 240
BtsIMutI CAGTG 1 cut(s) 189
CseI GACGC 1 cut(s) 23
CviAII CATG 1 cut(s) 219
CviJI RGCY 7 cut(s) 5, 73, 111, 131, 140, 179, 196
CviKI_1 RGCY 7 cut(s) 5, 73, 111, 131, 140, 179, 196
DdeI CTNAG 2 cut(s) 6, 197
DpnI GATC 2 cut(s) 244, 254
DpnII GATC 2 cut(s) 242, 252
Eco57I CTGAAG 1 cut(s) 231
EcoNI CCTNNNNNAGG 1 cut(s) 56
FaeI CATG 1 cut(s) 222
FaiI YATR 1 cut(s) 220
FatI CATG 1 cut(s) 218
FauI CCCGC 1 cut(s) 125
Fnu4HI GCNGC 1 cut(s) 146
FokI GGATG 3 cut(s) 164, 235, 247
Fsp4HI GCNGC 1 cut(s) 146
FspBI CTAG 1 cut(s) 29
GluI GCNGC 1 cut(s) 146
HgaI GACGC 1 cut(s) 23
Hin1II CATG 1 cut(s) 222
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HpaI GTTAAC 1 cut(s) 19
HphI GGTGA 1 cut(s) 106
Hpy166II GTNNAC 2 cut(s) 19, 203
Hpy188I TCNGA 1 cut(s) 65
Hpy188III TCNNGA 2 cut(s) 106, 125
Hpy8I GTNNAC 2 cut(s) 19, 203
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4IV ACGT 1 cut(s) 21
HpyCH4V TGCA 2 cut(s) 148, 155
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 117, 137
HpyF3I CTNAG 2 cut(s) 6, 197
HpySE526I ACGT 1 cut(s) 21
Hsp92II CATG 1 cut(s) 222
KspAI GTTAAC 1 cut(s) 19
Kzo9I GATC 2 cut(s) 242, 252
LpnPI CCDG 2 cut(s) 23, 134
Lsp1109I GCAGC 1 cut(s) 132
LweI GCATC 1 cut(s) 142
MaeI CTAG 1 cut(s) 29
MaeII ACGT 1 cut(s) 21
MaeIII GTNAC 1 cut(s) 169
MalI GATC 2 cut(s) 244, 254
MboI GATC 2 cut(s) 242, 252
MflI RGATCY 1 cut(s) 252
MluCI AATT 1 cut(s) 77
MmeI TCCRAC 2 cut(s) 43, 212
MnlI CCTC 2 cut(s) 122, 156
MroXI GAANNNNTTC 1 cut(s) 132
MseI TTAA 2 cut(s) 18, 93
MwoI GCNNNNNNNGC 3 cut(s) 47, 117, 137
NdeII GATC 2 cut(s) 242, 252
NlaIII CATG 1 cut(s) 222
NmuCI GTSAC 1 cut(s) 169
PdmI GAANNNNTTC 1 cut(s) 132
PflFI GACNNNGTC 1 cut(s) 59
PkrI GCNGC 1 cut(s) 147
Psp1406I AACGTT 1 cut(s) 21
PsrI GAACNNNNNNTAC 1 cut(s) 38
PstI CTGCAG 1 cut(s) 150
PsuI RGATCY 1 cut(s) 252
PsyI GACNNNGTC 1 cut(s) 59
SaqAI TTAA 2 cut(s) 18, 93
SatI GCNGC 1 cut(s) 146
Sau3AI GATC 2 cut(s) 242, 252
SetI ASST 5 cut(s) 24, 63, 75, 133, 142
SfaNI GCATC 1 cut(s) 142
SfcI CTRYAG 1 cut(s) 146
Sse9I AATT 1 cut(s) 77
SsiI CCGC 1 cut(s) 118
SspMI CTAG 1 cut(s) 29
TaaI ACNGT 1 cut(s) 184
TaiI ACGT 1 cut(s) 24
TaqI TCGA 1 cut(s) 126
TasI AATT 1 cut(s) 77
Tru1I TTAA 2 cut(s) 18, 93
Tru9I TTAA 2 cut(s) 18, 93
TscAI CASTG 1 cut(s) 189
TseFI GTSAC 1 cut(s) 169
TseI GCWGC 1 cut(s) 145
Tsp45I GTSAC 1 cut(s) 169
TspDTI ATGAA 1 cut(s) 207
TspGWI ACGGA 1 cut(s) 188
TspRI CASTG 1 cut(s) 189
Tth111I GACNNNGTC 1 cut(s) 59
XagI CCTNNNNNAGG 1 cut(s) 56
XmnI GAANNNNTTC 1 cut(s) 132
XspI CTAG 1 cut(s) 29
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.