Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0016925

Physical Location & Seq

Genomic Coordinates Forward (+)

28252734 .. 28255083

Gene Structure 2350 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G286200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1149 bp

ATGAAGGCTTGTTCTTTCTTTCCAAGGACCAAAATGCCCTGGAACTGCTTTTGCTGTTGCTGCCTCTCTCAAGATCAAGAGGAACCAGCTGAGACCAGGGTGCACAAGAATAGGGATTACCCGTGGGATATATATTCCCTCAAGGACCTTCTTCATGCCACAAACAGCTTCCACCATGACAACAAAATTGGAGAAGGAGGGTTTGGAAGTGTTTATTGGGGTCGAACAAGTAAAGGCGTCGAGATAGCTGTGAAACGACTAAAGACGATGAGTGCAAAGGCAGAGATGGAATTTGCAGTGGAAGTTGAAATACTCGGAAGGGTGAGGCATAGAAACTTGTTAGGCCTGCGGGGATTTTATGCCGGTGGTGAGGAAAGGCTCATAGTGTACGATTACATGCCTAATCATAGCTTGATCACCCATTTGCATGGCCAACTTGCAGCAGATTGCCTTCTTGATTGGCCAAGACGAATGAGCATCGCCATTGGATCAGCTGAAGGTCTATCGTACCTGCATCATGAGGCCAATCCTCATATAATTCACAGAGACATAAAGGCCAGCAACGTGCTTCTAGACACTGAATTTGAAGCAAAAGTCGCTGATTTTGGATTTGCAAAGCTGATCCCGGATGGTGTAACTCATCTGACTACTAGGGTAAAGGGAACTCTTGGATATCTAGCTCCTGAATATGCCATGTGGGGTAAAGTTTCTGAGAGCTGTGATGTTTACAGCTTTGGGATTTTGCTCTTAGAAATAATTAGCGGAAAAAAGCCGATAGAGAAACTCCCCGGCGGAGTGAAACGTGACATTGTTCAATGGGTCACCCCTTATGTCCAAAAGGGTTTATTCAATCAAATTGCAGATTCAAGGTTGAAGGGCAAGTTTGATCGAGAACAAGTTAAGTCGACGGTCCTGATTGCCATGAAATGCACTGATAACAGTCCCGATAATCGACCCACCATGGTAGAAGTGGTGGCTTGGCTTAAGGGTGGTATAAGAAGAAGGAAAAAAGAGATCACAAATCATGTGGAGGAGACTGAGGATGAAGAAGAAGTATACGACGAAACCGACACCGATCATGAAAATTATGGTATGGAGCAATCTGATGCCAGAAAGAATATTACAAGGGCTAGATCACAAAGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

383

Amino Acids

43.56

Weight (kDa)

6.95

Isoelectric Point (pI)

48.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016925)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g28620
malus_domestica	MD00G1002700.v1.1 MD01G1191900.v1.1
prunus_persica	Prupe.2G286200_v2.0.a1
pyrus_communis	pycom01g20300 pycom07g23870
rosa_chinensis	RchiOBHm_Chr1g0376081
rosa_multiflora	Rmu_ssc0000116.1_g000028
rosa_roxburghii	Rroxscaffold_4G00282400
rosa_rugosa	Rorug01G0393800
rosa_samantha	Rh1AG405200 Rh1BG368800 Rh1DG398700
rosa_wichuraiana	Rw1G035960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	519
AccI	GTMKAC	2 cut(s)	905, 1056
AciI	CCGC	3 cut(s)	349, 762, 792
AclWI	GGATC	2 cut(s)	496, 616
AcoI	YGGCCR	2 cut(s)	430, 461
AcsI	RAATTY	2 cut(s)	290, 581
AcuI	CTGAAG	1 cut(s)	516
AcyI	GRCGYC	1 cut(s)	237
AfaI	GTAC	2 cut(s)	389, 509
AflII	CTTAAG	1 cut(s)	983
AgsI	TTSAA	6 cut(s)	308, 587, 815, 850, 867, 874
AjnI	CCWGG	2 cut(s)	38, 95
AjuI	GAANNNNNNNTTGG	4 cut(s)	186, 199, 218, 231
AluBI	AGCT	9 cut(s)	89, 168, 248, 411, 494, 619, 680, 717, 732
AluI	AGCT	9 cut(s)	89, 168, 248, 411, 494, 619, 680, 717, 732
Alw21I	GWGCWC	1 cut(s)	105
Alw26I	GTCTC	3 cut(s)	86, 540, 1028
Alw44I	GTGCAC	1 cut(s)	101
AlwI	GGATC	2 cut(s)	496, 616
AoxI	GGCC	5 cut(s)	343, 430, 461, 522, 555
ApaLI	GTGCAC	1 cut(s)	101
ApeKI	GCWGC	2 cut(s)	60, 440
ApoI	RAATTY	2 cut(s)	290, 581
ArsI	GACNNNNNNTTYG	2 cut(s)	566, 598
AspS9I	GGNCC	3 cut(s)	27, 145, 910
AsuC2I	CCSGG	2 cut(s)	626, 789
AsuHPI	GGTGA	4 cut(s)	334, 380, 409, 814
AvaII	GGWCC	3 cut(s)	27, 145, 910
BaeGI	GKGCMC	1 cut(s)	105
BalI	TGGCCA	2 cut(s)	432, 463
BarI	GAAGNNNNNNTAC	2 cut(s)	294, 326
Bbv12I	GWGCWC	1 cut(s)	105
BbvI	GCAGC	2 cut(s)	47, 452
BccI	CCATC	2 cut(s)	280, 623
BciT130I	CCWGG	2 cut(s)	40, 97
BclI	TGATCA	1 cut(s)	414
BcnI	CCSGG	2 cut(s)	626, 789
BcoDI	GTCTC	3 cut(s)	86, 540, 1028
BfaI	CTAG	4 cut(s)	572, 651, 677, 1131
BfrI	CTTAAG	1 cut(s)	983
BfuAI	ACCTGC	1 cut(s)	519
BisI	GCNGC	2 cut(s)	61, 441
BlsI	GCNGC	2 cut(s)	62, 442
Bme1390I	CCNGG	4 cut(s)	40, 97, 626, 789
Bme18I	GGWCC	3 cut(s)	27, 145, 910
BmgT120I	GGNCC	3 cut(s)	27, 145, 910
BmiI	GGNNCC	1 cut(s)	84
BmrFI	CCNGG	4 cut(s)	40, 97, 626, 789
BmsI	GCATC	3 cut(s)	486, 523, 1096
BpuEI	CTTGAG	2 cut(s)	54, 125
BpuMI	CCSGG	2 cut(s)	626, 789
BsaHI	GRCGYC	1 cut(s)	237
BsaI	GGTCTC	1 cut(s)	86
BsaJI	CCNNGG	6 cut(s)	23, 38, 96, 122, 787, 960
Bse118I	RCCGGY	1 cut(s)	362
BseBI	CCWGG	2 cut(s)	40, 97
BseDI	CCNNGG	6 cut(s)	23, 38, 96, 122, 787, 960
BseGI	GGATG	2 cut(s)	634, 1048
BseMII	CTCAG	3 cut(s)	81, 702, 1029
BseRI	GAGGAG	1 cut(s)	1046
BseSI	GKGCMC	1 cut(s)	105
BseXI	GCAGC	2 cut(s)	47, 452
BshFI	GGCC	5 cut(s)	345, 432, 463, 524, 557
BsiHKAI	GWGCWC	1 cut(s)	105
BsiSI	CCGG	3 cut(s)	363, 626, 789
BslFI	GGGAC	1 cut(s)	927
BsmAI	GTCTC	3 cut(s)	86, 540, 1028
BsmFI	GGGAC	1 cut(s)	927
BsnI	GGCC	5 cut(s)	345, 432, 463, 524, 557
Bso31I	GGTCTC	1 cut(s)	86
Bsp1286I	GDGCHC	1 cut(s)	105
Bsp143I	GATC	8 cut(s)	73, 414, 488, 621, 886, 1014, 1075, 1133
Bsp19I	CCATGG	1 cut(s)	960
BspACI	CCGC	3 cut(s)	349, 762, 792
BspANI	GGCC	5 cut(s)	345, 432, 463, 524, 557
BspCNI	CTCAG	3 cut(s)	82, 703, 1030
BspHI	TCATGA	2 cut(s)	517, 1078
BspLI	GGNNCC	1 cut(s)	84
BspMI	ACCTGC	1 cut(s)	519
BspPI	GGATC	2 cut(s)	496, 616
BspTI	CTTAAG	1 cut(s)	983
BspTNI	GGTCTC	1 cut(s)	86
BsrFI	RCCGGY	1 cut(s)	362
BssAI	RCCGGY	1 cut(s)	362
BssECI	CCNNGG	6 cut(s)	23, 38, 96, 122, 787, 960
BssMI	GATC	8 cut(s)	73, 414, 488, 621, 886, 1014, 1075, 1133
BssNAI	GTATAC	1 cut(s)	1057
BssNI	GRCGYC	1 cut(s)	237
BssT1I	CCWWGG	2 cut(s)	23, 960
Bst1107I	GTATAC	1 cut(s)	1057
Bst2UI	CCWGG	2 cut(s)	40, 97
Bst4CI	ACNGT	2 cut(s)	910, 941
BstACI	GRCGYC	1 cut(s)	237
BstAFI	CTTAAG	1 cut(s)	983
BstC8I	GCNNGC	2 cut(s)	347, 559
BstDEI	CTNAG	4 cut(s)	90, 711, 748, 1038
BstDSI	CCRYGG	2 cut(s)	122, 960
BstEII	GGTNACC	1 cut(s)	820
BstF5I	GGATG	2 cut(s)	634, 1048
BstKTI	GATC	8 cut(s)	76, 417, 491, 624, 889, 1017, 1078, 1136
BstMAI	GTCTC	3 cut(s)	86, 540, 1028
BstMBI	GATC	8 cut(s)	73, 414, 488, 621, 886, 1014, 1075, 1133
BstMWI	GCNNNNNNNGC	2 cut(s)	60, 596
BstNI	CCWGG	2 cut(s)	40, 97
BstNSI	RCATGY	1 cut(s)	400
BstPI	GGTNACC	1 cut(s)	820
BstSCI	CCNGG	4 cut(s)	38, 95, 624, 787
BstSLI	GKGCMC	1 cut(s)	105
BstV1I	GCAGC	2 cut(s)	47, 452
BstXI	CCANNNNNNTGG	1 cut(s)	428
BstZ17I	GTATAC	1 cut(s)	1057
BsuRI	GGCC	5 cut(s)	345, 432, 463, 524, 557
BtgI	CCRYGG	2 cut(s)	122, 960
BtgZI	GCGATG	1 cut(s)	463
BtsCI	GGATG	2 cut(s)	634, 1048
BtsI	GCAGTG	1 cut(s)	303
BtsIMutI	CAGTG	3 cut(s)	303, 576, 930
BveI	ACCTGC	1 cut(s)	519
Cac8I	GCNNGC	2 cut(s)	347, 559
CciI	TCATGA	2 cut(s)	517, 1078
Cfr10I	RCCGGY	1 cut(s)	362
Cfr13I	GGNCC	3 cut(s)	27, 145, 910
CseI	GACGC	1 cut(s)	226
Csp6I	GTAC	2 cut(s)	388, 508
CspCI	CAANNNNNGTGG	2 cut(s)	1008, 1043
CviQI	GTAC	2 cut(s)	388, 508
DdeI	CTNAG	4 cut(s)	90, 711, 748, 1038
DpnI	GATC	8 cut(s)	75, 416, 490, 623, 888, 1016, 1077, 1135
DpnII	GATC	8 cut(s)	73, 414, 488, 621, 886, 1014, 1075, 1133
EaeI	YGGCCR	2 cut(s)	430, 461
EciI	GGCGGA	1 cut(s)	807
Eco130I	CCWWGG	2 cut(s)	23, 960
Eco147I	AGGCCT	1 cut(s)	345
Eco31I	GGTCTC	1 cut(s)	86
Eco32I	GATATC	1 cut(s)	674
Eco47I	GGWCC	3 cut(s)	27, 145, 910
Eco57I	CTGAAG	1 cut(s)	516
Eco91I	GGTNACC	1 cut(s)	820
EcoO109I	RGGNCCY	1 cut(s)	145
EcoO65I	GGTNACC	1 cut(s)	820
EcoRII	CCWGG	2 cut(s)	38, 95
EcoRV	GATATC	1 cut(s)	674
EcoT14I	CCWWGG	2 cut(s)	23, 960
ErhI	CCWWGG	2 cut(s)	23, 960
FaqI	GGGAC	1 cut(s)	927
FauI	CCCGC	1 cut(s)	342
FbaI	TGATCA	1 cut(s)	414
FblI	GTMKAC	2 cut(s)	905, 1056
Fnu4HI	GCNGC	2 cut(s)	61, 441
FokI	GGATG	2 cut(s)	641, 1055
Fsp4HI	GCNGC	2 cut(s)	61, 441
FspBI	CTAG	4 cut(s)	572, 651, 677, 1131
GluI	GCNGC	2 cut(s)	61, 441
HaeIII	GGCC	5 cut(s)	345, 432, 463, 524, 557
HapII	CCGG	3 cut(s)	363, 626, 789
HgaI	GACGC	1 cut(s)	226
Hin1I	GRCGYC	1 cut(s)	237
HincII	GTYRAC	1 cut(s)	906
HindII	GTYRAC	1 cut(s)	906
HinfI	GANTC	1 cut(s)	863
HpaII	CCGG	3 cut(s)	363, 626, 789
HphI	GGTGA	4 cut(s)	334, 380, 409, 814
Hpy166II	GTNNAC	5 cut(s)	103, 388, 727, 906, 1057
Hpy188I	TCNGA	4 cut(s)	317, 645, 712, 1105
Hpy8I	GTNNAC	5 cut(s)	103, 388, 727, 906, 1057
Hpy99I	CGWCG	3 cut(s)	242, 910, 1064
HpyAV	CCTTC	7 cut(s)	158, 188, 312, 461, 491, 868, 996
HpyCH4III	ACNGT	2 cut(s)	910, 941
HpyCH4IV	ACGT	2 cut(s)	564, 802
HpyCH4V	TGCA	9 cut(s)	103, 275, 296, 427, 440, 514, 614, 860, 930
HpyF10VI	GCNNNNNNNGC	2 cut(s)	60, 596
HpyF3I	CTNAG	4 cut(s)	90, 711, 748, 1038
HpySE526I	ACGT	2 cut(s)	564, 802
Hsp92I	GRCGYC	1 cut(s)	237
Ksp22I	TGATCA	1 cut(s)	414
Kzo9I	GATC	8 cut(s)	73, 414, 488, 621, 886, 1014, 1075, 1133
LmnI	GCTCC	2 cut(s)	685, 1096
Lsp1109I	GCAGC	2 cut(s)	47, 452
LweI	GCATC	3 cut(s)	486, 523, 1096
MaeI	CTAG	4 cut(s)	572, 651, 677, 1131
MaeII	ACGT	2 cut(s)	564, 802
MaeIII	GTNAC	3 cut(s)	634, 803, 820
MalI	GATC	8 cut(s)	75, 416, 490, 623, 888, 1016, 1077, 1135
MboI	GATC	8 cut(s)	73, 414, 488, 621, 886, 1014, 1075, 1133
MboII	GAAGA	4 cut(s)	143, 1011, 1058, 1061
MhlI	GDGCHC	1 cut(s)	105
MlsI	TGGCCA	2 cut(s)	432, 463
MluCI	AATT	7 cut(s)	186, 290, 537, 581, 756, 855, 1084
MluNI	TGGCCA	2 cut(s)	432, 463
Mox20I	TGGCCA	2 cut(s)	432, 463
MscI	TGGCCA	2 cut(s)	432, 463
MseI	TTAA	2 cut(s)	900, 984
MslI	CAYNNNNRTG	1 cut(s)	426
Msp20I	TGGCCA	2 cut(s)	432, 463
MspA1I	CMGCKG	2 cut(s)	89, 494
MspCI	CTTAAG	1 cut(s)	983
MspI	CCGG	3 cut(s)	363, 626, 789
MspR9I	CCNGG	4 cut(s)	40, 97, 626, 789
MvaI	CCWGG	2 cut(s)	40, 97
MwoI	GCNNNNNNNGC	2 cut(s)	60, 596
NciI	CCSGG	2 cut(s)	626, 789
NcoI	CCATGG	1 cut(s)	960
NdeII	GATC	8 cut(s)	73, 414, 488, 621, 886, 1014, 1075, 1133
NlaIV	GGNNCC	1 cut(s)	84
NmuCI	GTSAC	2 cut(s)	803, 820
NspI	RCATGY	1 cut(s)	400
PagI	TCATGA	2 cut(s)	517, 1078
PceI	AGGCCT	1 cut(s)	345
PcsI	WCGNNNNNNNCGW	1 cut(s)	1065
PfeI	GAWTC	1 cut(s)	863
PfoI	TCCNGGA	1 cut(s)	624
PkrI	GCNGC	2 cut(s)	62, 442
PpuMI	RGGWCCY	1 cut(s)	145
Psp5II	RGGWCCY	1 cut(s)	145
Psp6I	CCWGG	2 cut(s)	38, 95
PspEI	GGTNACC	1 cut(s)	820
PspGI	CCWGG	2 cut(s)	38, 95
PspN4I	GGNNCC	1 cut(s)	84
PspPI	GGNCC	3 cut(s)	27, 145, 910
PspPPI	RGGWCCY	1 cut(s)	145
PvuII	CAGCTG	2 cut(s)	89, 494
RsaI	GTAC	2 cut(s)	389, 509
RsaNI	GTAC	2 cut(s)	388, 508
RseI	CAYNNNNRTG	1 cut(s)	426
SalI	GTCGAC	1 cut(s)	904
SaqAI	TTAA	2 cut(s)	900, 984
SatI	GCNGC	2 cut(s)	61, 441
Sau3AI	GATC	8 cut(s)	73, 414, 488, 621, 886, 1014, 1075, 1133
Sau96I	GGNCC	3 cut(s)	27, 145, 910
ScrFI	CCNGG	4 cut(s)	40, 97, 626, 789
SduI	GDGCHC	1 cut(s)	105
SfaNI	GCATC	3 cut(s)	486, 523, 1096
SinI	GGWCC	3 cut(s)	27, 145, 910
SmiMI	CAYNNNNRTG	1 cut(s)	426
SmlI	CTYRAG	3 cut(s)	69, 140, 983
SmoI	CTYRAG	3 cut(s)	69, 140, 983
Sse9I	AATT	7 cut(s)	186, 290, 537, 581, 756, 855, 1084
SseBI	AGGCCT	1 cut(s)	345
SsiI	CCGC	3 cut(s)	349, 762, 792
SspI	AATATT	1 cut(s)	1120
SspMI	CTAG	4 cut(s)	572, 651, 677, 1131
StuI	AGGCCT	1 cut(s)	345
StyD4I	CCNGG	4 cut(s)	38, 95, 624, 787
StyI	CCWWGG	2 cut(s)	23, 960
TaaI	ACNGT	2 cut(s)	910, 941
TaiI	ACGT	2 cut(s)	567, 805
TaqI	TCGA	5 cut(s)	223, 240, 889, 905, 952
TasI	AATT	7 cut(s)	186, 290, 537, 581, 756, 855, 1084
TfiI	GAWTC	1 cut(s)	863
Tru1I	TTAA	2 cut(s)	900, 984
Tru9I	TTAA	2 cut(s)	900, 984
TscAI	CASTG	3 cut(s)	303, 583, 937
TseFI	GTSAC	2 cut(s)	803, 820
TseI	GCWGC	2 cut(s)	60, 440
Tsp45I	GTSAC	2 cut(s)	803, 820
TspDTI	ATGAA	5 cut(s)	17, 143, 938, 1059, 1095
TspRI	CASTG	3 cut(s)	303, 583, 937
Vha464I	CTTAAG	1 cut(s)	983
VneI	GTGCAC	1 cut(s)	101
VpaK11BI	GGWCC	3 cut(s)	27, 145, 910
XapI	RAATTY	2 cut(s)	290, 581
XbaI	TCTAGA	1 cut(s)	571
XceI	RCATGY	1 cut(s)	400
XcmI	CCANNNNNNNNNTGG	1 cut(s)	967
XmiI	GTMKAC	2 cut(s)	905, 1056
XspI	CTAG	4 cut(s)	572, 651, 677, 1131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.