Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007377

Physical Location & Seq

Genomic Coordinates Reverse (-)

28923976 .. 28927428

Gene Structure 3453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G301200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 960 bp

ATGGCCACCGGATCGCTTAGGAGGAAGCTAAATAAGCGATCGGATCCCAGGCCTTACACTTCCATGGCTGCTCGGCCCAAGTCCTCAAACTACAGAAAAACCTCTCTGATCCTCTCCGTCGTTCTCATTGTTGGCGTTTTTATTCTTCTGGGCATTTCTTCGAACATTTTGATTAACGTCTCTGCCGTTTCCGCCAGCATTTTCTCAATCGAGGTAGTCAATGAGTTCCCTCACGATCCCAACGCCTTCACCCAGGGGCTTCTTTATGCTGGAAATGATAGCTTATTCGAATCAACTGGTCTTTATGGGAAGTCATCAGTGCGCAAGGTAGCTCTTCAAACAGGGAAGGTTGAAGTTCTTCAGAAGATGGATGCTTCTTATTTTGGAGAGGGATTAACTCTCCTTGGTGAAAGGCTATTCCAAGTAACTTGGTTGACGAACTATGGTTTCATATATGACCGAAAAAATTTAAGCAAATTTGAGAAGTTCACTCATAAGATGCATGATGGTTGGGGACTGGCTACTGATGGGAAAGTGTTATTTGGAAGTGATGGCTCGTCAGTGTTGTACAAGATTGACCCTCAAACATTGAAAGTGACCGACAAACATATTGTCAAATACAAAGATCATGAAGTGTACAACCTCAATGAGTTGGAGTTTGTAAAAGGCGAAGTTTGGGCAAATGTTTATCAGACTGACTGCATTGCTAGAATCTCACATGAAGATGGCAGGGTGCTTGGATGGATTCTCCTTCCAAATTTAAGGGAAGGCTTACTAGCATCTGGGAATCATGGTATTGATGTTCTAAATGGCATTGCATGGGATAGTGACAAAAAACGTATCTTTGTGACCGGAAAACTTTGGCCGAAGCTTTATGAGATCAAGCTACATCCAATAAAGAAACATTTCAGAGATGGAGCCATTGAGGAGCTCTGCCTGCGAAGGCCATTCCATTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016603 GO:0016740 GO:0016746 GO:0016755 GO:0017186 GO:0018193 GO:0018199 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glu_cyclase_2

Protein Analysis

320

Amino Acids

36.04

Weight (kDa)

9.32

Isoelectric Point (pI)

33.07

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G25720 AT4G25720 AT4G25720 AT4G25720 AT4G25720
fragaria_vesca	FvH4_7g30250 FvH4_7g30250 FvH4_7g30250 FvH4_7g30250 FvH4_7g30250
malus_domestica	MD01G1208600.v1.1 MD14G1086700.v1.1
prunus_persica	Prupe.2G301200_v2.0.a1
pyrus_communis	pycom01g21920
rosa_chinensis	RchiOBHm_Chr1g0378381
rosa_laevigata	RLG00000026439
rosa_multiflora	Rmu_sc0013545.1_g000011
rosa_roxburghii	Rroxscaffold_4G00280490
rosa_rugosa	Rorug01G0408300 Rorug01G0408400
rosa_samantha	Rh1AG429900 Rh1BG387600 Rh1CG401100 Rh1DG418700
rosa_wichuraiana	Rw1G037620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	323
AciI	CCGC	1 cut(s)	192
AclWI	GGATC	5 cut(s)	19, 38, 51, 103, 230
AcoI	YGGCCR	2 cut(s)	3, 863
AcsI	RAATTY	3 cut(s)	466, 476, 757
AcuI	CTGAAG	1 cut(s)	344
AfaI	GTAC	2 cut(s)	569, 638
AgsI	TTSAA	3 cut(s)	338, 353, 592
AjnI	CCWGG	2 cut(s)	47, 252
AluBI	AGCT	6 cut(s)	28, 282, 332, 871, 886, 931
AluI	AGCT	6 cut(s)	28, 282, 332, 871, 886, 931
Alw21I	GWGCWC	1 cut(s)	933
Alw26I	GTCTC	1 cut(s)	184
AlwI	GGATC	5 cut(s)	19, 38, 51, 103, 230
AoxI	GGCC	5 cut(s)	3, 50, 74, 863, 944
ApeKI	GCWGC	1 cut(s)	68
ApoI	RAATTY	3 cut(s)	466, 476, 757
ArsI	GACNNNNNNTTYG	2 cut(s)	597, 629
Asp700I	GAANNNNTTC	2 cut(s)	357, 905
AspLEI	GCGC	1 cut(s)	324
AspS9I	GGNCC	1 cut(s)	75
AsuHPI	GGTGA	2 cut(s)	241, 419
AsuII	TTCGAA	2 cut(s)	161, 288
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	43
BanII	GRGCYC	1 cut(s)	933
Bbv12I	GWGCWC	1 cut(s)	933
BbvI	GCAGC	1 cut(s)	55
BccI	CCATC	7 cut(s)	361, 500, 521, 545, 719, 735, 908
BceAI	ACGGC	1 cut(s)	170
BciT130I	CCWGG	2 cut(s)	49, 254
BcoDI	GTCTC	1 cut(s)	184
BfaI	CTAG	2 cut(s)	708, 776
BfmI	CTRYAG	1 cut(s)	91
BisI	GCNGC	1 cut(s)	69
BlsI	GCNGC	1 cut(s)	70
Bme1390I	CCNGG	2 cut(s)	49, 254
BmgT120I	GGNCC	1 cut(s)	75
BmiI	GGNNCC	2 cut(s)	45, 919
BmrFI	CCNGG	2 cut(s)	49, 254
BmsI	GCATC	3 cut(s)	361, 489, 788
Bpu10I	CCTNAGC	1 cut(s)	17
Bpu14I	TTCGAA	2 cut(s)	161, 288
BsaJI	CCNNGG	5 cut(s)	47, 63, 252, 253, 403
BsaWI	WCCGGW	2 cut(s)	8, 851
Bse1I	ACTGG	2 cut(s)	301, 522
Bse3DI	GCAATG	2 cut(s)	702, 813
BseBI	CCWGG	2 cut(s)	49, 254
BseDI	CCNNGG	5 cut(s)	47, 63, 252, 253, 403
BseGI	GGATG	3 cut(s)	376, 746, 889
BseMI	GCAATG	2 cut(s)	702, 813
BseNI	ACTGG	2 cut(s)	301, 522
BseRI	GAGGAG	1 cut(s)	941
BseXI	GCAGC	1 cut(s)	55
Bsh1285I	CGRYCG	1 cut(s)	41
BshFI	GGCC	5 cut(s)	5, 52, 76, 865, 946
BsiEI	CGRYCG	1 cut(s)	41
BsiHKAI	GWGCWC	1 cut(s)	933
BsiSI	CCGG	2 cut(s)	9, 852
BslFI	GGGAC	1 cut(s)	528
BsmAI	GTCTC	1 cut(s)	184
BsmBI	CGTCTC	1 cut(s)	184
BsmFI	GGGAC	1 cut(s)	528
BsnI	GGCC	5 cut(s)	5, 52, 76, 865, 946
Bsp119I	TTCGAA	2 cut(s)	161, 288
Bsp1286I	GDGCHC	1 cut(s)	933
Bsp1407I	TGTACA	2 cut(s)	567, 636
Bsp143I	GATC	7 cut(s)	11, 38, 43, 108, 235, 625, 879
Bsp19I	CCATGG	1 cut(s)	63
BspACI	CCGC	1 cut(s)	192
BspANI	GGCC	5 cut(s)	5, 52, 76, 865, 946
BspHI	TCATGA	1 cut(s)	628
BspLI	GGNNCC	2 cut(s)	45, 919
BspPI	GGATC	5 cut(s)	19, 38, 51, 103, 230
BspQI	GCTCTTC	1 cut(s)	339
BspT104I	TTCGAA	2 cut(s)	161, 288
BsrDI	GCAATG	2 cut(s)	702, 813
BsrGI	TGTACA	2 cut(s)	567, 636
BsrI	ACTGG	2 cut(s)	301, 522
BssECI	CCNNGG	5 cut(s)	47, 63, 252, 253, 403
BssMI	GATC	7 cut(s)	11, 38, 43, 108, 235, 625, 879
BssT1I	CCWWGG	2 cut(s)	63, 403
Bst2UI	CCWGG	2 cut(s)	49, 254
Bst6I	CTCTTC	1 cut(s)	339
BstAUI	TGTACA	2 cut(s)	567, 636
BstBI	TTCGAA	2 cut(s)	161, 288
BstC8I	GCNNGC	2 cut(s)	196, 938
BstDEI	CTNAG	1 cut(s)	17
BstDSI	CCRYGG	1 cut(s)	63
BstF5I	GGATG	3 cut(s)	376, 746, 889
BstHHI	GCGC	1 cut(s)	324
BstKTI	GATC	7 cut(s)	14, 41, 46, 111, 238, 628, 882
BstMAI	GTCTC	1 cut(s)	184
BstMBI	GATC	7 cut(s)	11, 38, 43, 108, 235, 625, 879
BstMCI	CGRYCG	1 cut(s)	41
BstMWI	GCNNNNNNNGC	3 cut(s)	34, 191, 937
BstNI	CCWGG	2 cut(s)	49, 254
BstSCI	CCNGG	2 cut(s)	47, 252
BstSFI	CTRYAG	1 cut(s)	91
BstV1I	GCAGC	1 cut(s)	55
BstX2I	RGATCY	1 cut(s)	43
BstYI	RGATCY	1 cut(s)	43
BsuRI	GGCC	5 cut(s)	5, 52, 76, 865, 946
BtgI	CCRYGG	1 cut(s)	63
BtsCI	GGATG	3 cut(s)	376, 746, 889
BtsIMutI	CAGTG	2 cut(s)	324, 567
Cac8I	GCNNGC	2 cut(s)	196, 938
CciI	TCATGA	1 cut(s)	628
CfoI	GCGC	1 cut(s)	324
Cfr13I	GGNCC	1 cut(s)	75
Csp6I	GTAC	2 cut(s)	568, 637
CviAII	CATG	6 cut(s)	64, 503, 629, 719, 791, 819
CviQI	GTAC	2 cut(s)	568, 637
DdeI	CTNAG	1 cut(s)	17
DpnI	GATC	7 cut(s)	13, 40, 45, 110, 237, 627, 881
DpnII	GATC	7 cut(s)	11, 38, 43, 108, 235, 625, 879
EaeI	YGGCCR	2 cut(s)	3, 863
Eam1104I	CTCTTC	1 cut(s)	339
EarI	CTCTTC	1 cut(s)	339
EciI	GGCGGA	1 cut(s)	181
Ecl136II	GAGCTC	1 cut(s)	931
Eco130I	CCWWGG	2 cut(s)	63, 403
Eco147I	AGGCCT	1 cut(s)	52
Eco24I	GRGCYC	1 cut(s)	933
Eco53kI	GAGCTC	1 cut(s)	931
Eco57I	CTGAAG	1 cut(s)	344
EcoICRI	GAGCTC	1 cut(s)	931
EcoRII	CCWGG	2 cut(s)	47, 252
EcoT14I	CCWWGG	2 cut(s)	63, 403
EcoT22I	ATGCAT	1 cut(s)	504
EcoT38I	GRGCYC	1 cut(s)	933
ErhI	CCWWGG	2 cut(s)	63, 403
Esp3I	CGTCTC	1 cut(s)	184
FaeI	CATG	6 cut(s)	67, 506, 632, 722, 794, 822
FaqI	GGGAC	1 cut(s)	528
FatI	CATG	6 cut(s)	63, 502, 628, 718, 790, 818
Fnu4HI	GCNGC	1 cut(s)	69
FokI	GGATG	3 cut(s)	383, 753, 876
FriOI	GRGCYC	1 cut(s)	933
Fsp4HI	GCNGC	1 cut(s)	69
FspBI	CTAG	2 cut(s)	708, 776
FspI	TGCGCA	1 cut(s)	323
GlaI	GCGC	1 cut(s)	323
GluI	GCNGC	1 cut(s)	69
HaeIII	GGCC	5 cut(s)	5, 52, 76, 865, 946
HapII	CCGG	2 cut(s)	9, 852
HhaI	GCGC	1 cut(s)	324
Hin1II	CATG	6 cut(s)	67, 506, 632, 722, 794, 822
Hin6I	GCGC	1 cut(s)	322
HinP1I	GCGC	1 cut(s)	322
HincII	GTYRAC	1 cut(s)	435
HindII	GTYRAC	1 cut(s)	435
HindIII	AAGCTT	1 cut(s)	869
HinfI	GANTC	4 cut(s)	290, 711, 745, 787
HpaII	CCGG	2 cut(s)	9, 852
HphI	GGTGA	2 cut(s)	241, 419
Hpy166II	GTNNAC	3 cut(s)	435, 489, 637
Hpy188I	TCNGA	5 cut(s)	43, 108, 363, 693, 911
Hpy188III	TCNNGA	2 cut(s)	233, 629
Hpy8I	GTNNAC	3 cut(s)	435, 489, 637
Hpy99I	CGWCG	1 cut(s)	122
HpyAV	CCTTC	5 cut(s)	256, 340, 761, 761, 936
HpyCH4IV	ACGT	2 cut(s)	177, 838
HpyCH4V	TGCA	3 cut(s)	502, 702, 818
HpyF10VI	GCNNNNNNNGC	3 cut(s)	34, 191, 937
HpyF3I	CTNAG	1 cut(s)	17
HpySE526I	ACGT	2 cut(s)	177, 838
Hsp92II	CATG	6 cut(s)	67, 506, 632, 722, 794, 822
HspAI	GCGC	1 cut(s)	322
Kzo9I	GATC	7 cut(s)	11, 38, 43, 108, 235, 625, 879
LguI	GCTCTTC	1 cut(s)	339
LmnI	GCTCC	2 cut(s)	917, 928
Lsp1109I	GCAGC	1 cut(s)	55
LweI	GCATC	3 cut(s)	361, 489, 788
MaeI	CTAG	2 cut(s)	708, 776
MaeII	ACGT	2 cut(s)	177, 838
MaeIII	GTNAC	4 cut(s)	424, 595, 827, 847
MalI	GATC	7 cut(s)	13, 40, 45, 110, 237, 627, 881
MboI	GATC	7 cut(s)	11, 38, 43, 108, 235, 625, 879
MboII	GAAGA	6 cut(s)	137, 150, 326, 350, 376, 734
MflI	RGATCY	1 cut(s)	43
MhlI	GDGCHC	1 cut(s)	933
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	3 cut(s)	466, 476, 757
MluNI	TGGCCA	1 cut(s)	5
MmeI	TCCRAC	1 cut(s)	633
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	504
MroXI	GAANNNNTTC	2 cut(s)	357, 905
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	4 cut(s)	174, 395, 470, 761
MslI	CAYNNNNRTG	2 cut(s)	62, 723
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	2 cut(s)	9, 852
MspR9I	CCNGG	2 cut(s)	49, 254
MvaI	CCWGG	2 cut(s)	49, 254
MwoI	GCNNNNNNNGC	3 cut(s)	34, 191, 937
NcoI	CCATGG	1 cut(s)	63
NdeII	GATC	7 cut(s)	11, 38, 43, 108, 235, 625, 879
NlaIII	CATG	6 cut(s)	67, 506, 632, 722, 794, 822
NlaIV	GGNNCC	2 cut(s)	45, 919
NmeAIII	GCCGAG	1 cut(s)	52
NmuCI	GTSAC	3 cut(s)	595, 827, 847
NsbI	TGCGCA	1 cut(s)	323
NsiI	ATGCAT	1 cut(s)	504
NspV	TTCGAA	2 cut(s)	161, 288
PagI	TCATGA	1 cut(s)	628
PasI	CCCWGGG	1 cut(s)	253
PceI	AGGCCT	1 cut(s)	52
PciSI	GCTCTTC	1 cut(s)	339
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PdmI	GAANNNNTTC	2 cut(s)	357, 905
PfeI	GAWTC	4 cut(s)	290, 711, 745, 787
PkrI	GCNGC	1 cut(s)	70
Ple19I	CGATCG	1 cut(s)	41
Psp124BI	GAGCTC	1 cut(s)	933
Psp6I	CCWGG	2 cut(s)	47, 252
PspGI	CCWGG	2 cut(s)	47, 252
PspN4I	GGNNCC	2 cut(s)	45, 919
PspPI	GGNCC	1 cut(s)	75
PsuI	RGATCY	1 cut(s)	43
PvuI	CGATCG	1 cut(s)	41
RsaI	GTAC	2 cut(s)	569, 638
RsaNI	GTAC	2 cut(s)	568, 637
RseI	CAYNNNNRTG	2 cut(s)	62, 723
SacI	GAGCTC	1 cut(s)	933
SapI	GCTCTTC	1 cut(s)	339
SaqAI	TTAA	4 cut(s)	174, 395, 470, 761
SatI	GCNGC	1 cut(s)	69
Sau3AI	GATC	7 cut(s)	11, 38, 43, 108, 235, 625, 879
Sau96I	GGNCC	1 cut(s)	75
ScrFI	CCNGG	2 cut(s)	49, 254
SduI	GDGCHC	1 cut(s)	933
SfaNI	GCATC	3 cut(s)	361, 489, 788
SfcI	CTRYAG	1 cut(s)	91
SfuI	TTCGAA	2 cut(s)	161, 288
SmiMI	CAYNNNNRTG	2 cut(s)	62, 723
Sse9I	AATT	3 cut(s)	466, 476, 757
SseBI	AGGCCT	1 cut(s)	52
SsiI	CCGC	1 cut(s)	192
SspMI	CTAG	2 cut(s)	708, 776
SstI	GAGCTC	1 cut(s)	933
StuI	AGGCCT	1 cut(s)	52
StyD4I	CCNGG	2 cut(s)	47, 252
StyI	CCWWGG	2 cut(s)	63, 403
TaiI	ACGT	2 cut(s)	180, 841
TaqI	TCGA	3 cut(s)	161, 210, 288
TaqII	GACCGA	2 cut(s)	474, 614
TasI	AATT	3 cut(s)	466, 476, 757
TatI	WGTACW	2 cut(s)	567, 636
TfiI	GAWTC	4 cut(s)	290, 711, 745, 787
Tru1I	TTAA	4 cut(s)	174, 395, 470, 761
Tru9I	TTAA	4 cut(s)	174, 395, 470, 761
TscAI	CASTG	2 cut(s)	324, 567
TseFI	GTSAC	3 cut(s)	595, 827, 847
TseI	GCWGC	1 cut(s)	68
Tsp45I	GTSAC	3 cut(s)	595, 827, 847
TspDTI	ATGAA	3 cut(s)	439, 645, 735
TspGWI	ACGGA	1 cut(s)	106
TspRI	CASTG	2 cut(s)	324, 567
XapI	RAATTY	3 cut(s)	466, 476, 757
XmnI	GAANNNNTTC	2 cut(s)	357, 905
XspI	CTAG	2 cut(s)	708, 776
Zsp2I	ATGCAT	1 cut(s)	504

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.