Rh1DG418700

Glutaminyl-peptide

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0007377
Physical Location & Seq
Reverse (-)
63380737 .. 63383398
2662 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG418700.1

Sequence Viewer

Length: 972 bp
ATGGCCACTGGACCGCTTCGCAAGAGGCTCAATAAGCGATCCTCAGACCCCAAACCCCGCACTGCGATGGCAACCCGGCCTAGTTCGCCCAAATTCTACAAAAACACCTCTCTGATTCTCCTCATATTTCTCATTATCGCCGCTTTTGTTCTCTTGGGCATTCCGTCGAACATTTTTAGTACAGTTGTTTACAGCACTGTGTTTACTGGAATTTATTCGATTGAGGTCGTCAATGAGTTCCCTCATGATCCCAATGCCTTCACCCAGGGGCTTCTTTATGCTGGAAATGGGAGCTTATTTGAGTCCACTGGGCTTCATGGCCGGTCATCAGTGCGTAAGGTGGATATTCAAACAGGGAAGGTTGAGGTTCTTCAGAAGATGGATTCTAGATATTTTGGGGAGGGATTAACTCTTCTCGGTGAAAGGCTATTCCAAGTAACTTGGTTGACGAAAATTGGTTTCAAATATGACCGAAATGATTTAAGCAAATCTGAAAAGTTCACTCATCAAATGCAAGATGGTTGGGGACTGGCTACTGATGGAAAAGTGTTATTTGGAAGTGATGGCTCATCCGTGTTGTACAAGATTGACCCTCAAACATTGAAAGTTATAGACAAACACGTAGTCAAATACAAAGATCATGAAGTGCACAACCTCAATGAGTTGGAGTTTATACAAGGCGAAGTTTGGGCAAATGTTTATCAGACAGACTGCATTGCTAGAATCTCACAGGATGATGGTAGGGTGCTTGGATGGATTCTTCTTCCAAATTTAAGGGAGGGTTTACTAGCTGCTGGAAATAATGCTATCGATGTGCTAAACGGCATTGCATGGGATAGCGACACCAACCGTATTTTTGTGACTGGAAAACTATGGCCGAAGCTTTATGAGATCAAGCTGCATCCAATAAAGAAACAGGTCAAGGATGGAGCCATTGAGCAGCTATGCCTACGGCAGCCATTCTTTCTTTGA

Protein Analysis

323

Amino Acids

36.38

Weight (kDa)

9.11

Isoelectric Point (pI)

31.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glu_cyclase_2 PF05096 70 - 300 4.5e-92 Glutamine cyclotransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 14, 58, 141
AclWI GGATC 2 cut(s) 33, 242
AcoI YGGCCR 3 cut(s) 3, 319, 875
AcsI RAATTY 3 cut(s) 92, 210, 769
AcuI CTGAAG 1 cut(s) 356
AfaI GTAC 2 cut(s) 181, 581
AflIII ACRYGT 1 cut(s) 619
AgsI TTSAA 3 cut(s) 350, 463, 604
AjnI CCWGG 1 cut(s) 264
AluBI AGCT 5 cut(s) 294, 791, 883, 898, 943
AluI AGCT 5 cut(s) 294, 791, 883, 898, 943
Alw21I GWGCWC 1 cut(s) 651
Alw44I GTGCAC 1 cut(s) 647
AlwI GGATC 2 cut(s) 33, 242
AoxI GGCC 4 cut(s) 3, 77, 319, 875
ApaLI GTGCAC 1 cut(s) 647
ApeKI GCWGC 4 cut(s) 791, 898, 940, 955
ApoI RAATTY 3 cut(s) 92, 210, 769
ArsI GACNNNNNNTTYG 2 cut(s) 609, 641
Asp700I GAANNNNTTC 1 cut(s) 214
AspS9I GGNCC 1 cut(s) 11
AsuC2I CCSGG 1 cut(s) 76
AsuHPI GGTGA 2 cut(s) 253, 431
AvaII GGWCC 1 cut(s) 11
BaeGI GKGCMC 1 cut(s) 651
BalI TGGCCA 1 cut(s) 5
Bbv12I GWGCWC 1 cut(s) 651
BbvI GCAGC 4 cut(s) 778, 885, 952, 967
BccI CCATC 8 cut(s) 61, 373, 512, 533, 557, 731, 747, 920
BceAI ACGGC 2 cut(s) 838, 968
BciT130I CCWGG 1 cut(s) 266
BcnI CCSGG 1 cut(s) 76
BfaI CTAG 4 cut(s) 81, 387, 720, 788
BisI GCNGC 5 cut(s) 141, 792, 899, 941, 956
BlsI GCNGC 5 cut(s) 142, 793, 900, 942, 957
Bme1390I CCNGG 2 cut(s) 76, 266
Bme18I GGWCC 1 cut(s) 11
BmgT120I GGNCC 1 cut(s) 11
BmiI GGNNCC 1 cut(s) 931
BmrFI CCNGG 2 cut(s) 76, 266
BmrI ACTGGG 1 cut(s) 318
BmsI GCATC 1 cut(s) 910
BmuI ACTGGG 1 cut(s) 318
BpuMI CCSGG 1 cut(s) 76
Bsa29I ATCGAT 1 cut(s) 810
BsaAI YACGTR 1 cut(s) 622
BsaJI CCNNGG 2 cut(s) 264, 265
Bse118I RCCGGY 1 cut(s) 321
Bse1I ACTGG 5 cut(s) 13, 211, 313, 534, 868
Bse3DI GCAATG 2 cut(s) 714, 825
BseBI CCWGG 1 cut(s) 266
BseCI ATCGAT 1 cut(s) 810
BseDI CCNNGG 2 cut(s) 264, 265
BseGI GGATG 5 cut(s) 569, 739, 758, 901, 931
BseMI GCAATG 2 cut(s) 714, 825
BseMII CTCAG 1 cut(s) 57
BseNI ACTGG 5 cut(s) 13, 211, 313, 534, 868
BseRI GAGGAG 1 cut(s) 110
BseSI GKGCMC 1 cut(s) 651
BseXI GCAGC 4 cut(s) 778, 885, 952, 967
BshFI GGCC 4 cut(s) 5, 79, 321, 877
BshVI ATCGAT 1 cut(s) 810
BsiHKAI GWGCWC 1 cut(s) 651
BsiSI CCGG 2 cut(s) 76, 322
BslFI GGGAC 1 cut(s) 540
BsmFI GGGAC 1 cut(s) 540
BsmI GAATGC 1 cut(s) 159
BsnI GGCC 4 cut(s) 5, 79, 321, 877
Bsp1286I GDGCHC 1 cut(s) 651
Bsp1407I TGTACA 1 cut(s) 579
Bsp143I GATC 4 cut(s) 38, 247, 637, 891
BspACI CCGC 3 cut(s) 14, 58, 141
BspANI GGCC 4 cut(s) 5, 79, 321, 877
BspCNI CTCAG 1 cut(s) 56
BspDI ATCGAT 1 cut(s) 810
BspHI TCATGA 2 cut(s) 244, 640
BspLI GGNNCC 1 cut(s) 931
BspPI GGATC 2 cut(s) 33, 242
BsrDI GCAATG 2 cut(s) 714, 825
BsrFI RCCGGY 1 cut(s) 321
BsrGI TGTACA 1 cut(s) 579
BsrI ACTGG 5 cut(s) 13, 211, 313, 534, 868
BssAI RCCGGY 1 cut(s) 321
BssECI CCNNGG 2 cut(s) 264, 265
BssMI GATC 4 cut(s) 38, 247, 637, 891
Bst2UI CCWGG 1 cut(s) 266
Bst4CI ACNGT 3 cut(s) 184, 199, 851
Bst6I CTCTTC 1 cut(s) 417
BstAUI TGTACA 1 cut(s) 579
BstBAI YACGTR 1 cut(s) 622
BstDEI CTNAG 1 cut(s) 43
BstF5I GGATG 5 cut(s) 569, 739, 758, 901, 931
BstKTI GATC 4 cut(s) 41, 250, 640, 894
BstMBI GATC 4 cut(s) 38, 247, 637, 891
BstMWI GCNNNNNNNGC 2 cut(s) 34, 85
BstNI CCWGG 1 cut(s) 266
BstSCI CCNGG 2 cut(s) 74, 264
BstSLI GKGCMC 1 cut(s) 651
BstV1I GCAGC 4 cut(s) 778, 885, 952, 967
Bsu15I ATCGAT 1 cut(s) 810
BsuRI GGCC 4 cut(s) 5, 79, 321, 877
BsuTUI ATCGAT 1 cut(s) 810
BtgZI GCGATG 1 cut(s) 80
BtsCI GGATG 5 cut(s) 569, 739, 758, 901, 931
BtsI GCAGTG 1 cut(s) 60
BtsIMutI CAGTG 5 cut(s) 6, 60, 195, 306, 336
CciI TCATGA 2 cut(s) 244, 640
Cfr10I RCCGGY 1 cut(s) 321
Cfr13I GGNCC 1 cut(s) 11
ClaI ATCGAT 1 cut(s) 810
Csp6I GTAC 2 cut(s) 180, 580
CviAII CATG 4 cut(s) 245, 317, 641, 831
CviQI GTAC 2 cut(s) 180, 580
DdeI CTNAG 1 cut(s) 43
DpnI GATC 4 cut(s) 40, 249, 639, 893
DpnII GATC 4 cut(s) 38, 247, 637, 891
EaeI YGGCCR 3 cut(s) 3, 319, 875
Eam1104I CTCTTC 1 cut(s) 417
EarI CTCTTC 1 cut(s) 417
Eco47I GGWCC 1 cut(s) 11
Eco57I CTGAAG 1 cut(s) 356
EcoRII CCWGG 1 cut(s) 264
FaeI CATG 4 cut(s) 248, 320, 644, 834
FaqI GGGAC 1 cut(s) 540
FatI CATG 4 cut(s) 244, 316, 640, 830
FauI CCCGC 1 cut(s) 65
Fnu4HI GCNGC 5 cut(s) 141, 792, 899, 941, 956
FokI GGATG 5 cut(s) 556, 746, 765, 888, 938
Fsp4HI GCNGC 5 cut(s) 141, 792, 899, 941, 956
FspBI CTAG 4 cut(s) 81, 387, 720, 788
GluI GCNGC 5 cut(s) 141, 792, 899, 941, 956
HaeIII GGCC 4 cut(s) 5, 79, 321, 877
HapII CCGG 2 cut(s) 76, 322
Hin1II CATG 4 cut(s) 248, 320, 644, 834
HincII GTYRAC 1 cut(s) 447
HindII GTYRAC 1 cut(s) 447
HindIII AAGCTT 1 cut(s) 881
HinfI GANTC 5 cut(s) 115, 302, 383, 723, 757
HpaII CCGG 2 cut(s) 76, 322
HphI GGTGA 2 cut(s) 253, 431
Hpy166II GTNNAC 7 cut(s) 190, 204, 306, 447, 501, 649, 785
Hpy188I TCNGA 5 cut(s) 46, 114, 375, 493, 705
Hpy188III TCNNGA 3 cut(s) 245, 387, 641
Hpy8I GTNNAC 7 cut(s) 190, 204, 306, 447, 501, 649, 785
Hpy99I CGWCG 1 cut(s) 169
HpyAV CCTTC 2 cut(s) 268, 352
HpyCH4III ACNGT 3 cut(s) 184, 199, 851
HpyCH4IV ACGT 1 cut(s) 621
HpyCH4V TGCA 5 cut(s) 514, 649, 714, 830, 901
HpyF10VI GCNNNNNNNGC 2 cut(s) 34, 85
HpyF3I CTNAG 1 cut(s) 43
HpySE526I ACGT 1 cut(s) 621
Hsp92II CATG 4 cut(s) 248, 320, 644, 834
Kzo9I GATC 4 cut(s) 38, 247, 637, 891
LmnI GCTCC 2 cut(s) 291, 929
Lsp1109I GCAGC 4 cut(s) 778, 885, 952, 967
LweI GCATC 1 cut(s) 910
MaeI CTAG 4 cut(s) 81, 387, 720, 788
MaeII ACGT 1 cut(s) 621
MaeIII GTNAC 2 cut(s) 436, 859
MalI GATC 4 cut(s) 40, 249, 639, 893
MboI GATC 4 cut(s) 38, 247, 637, 891
MboII GAAGA 5 cut(s) 362, 388, 404, 752, 755
MhlI GDGCHC 1 cut(s) 651
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 92, 210, 453, 769
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 311
MmeI TCCRAC 1 cut(s) 645
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 214
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 407, 482, 773
MslI CAYNNNNRTG 1 cut(s) 65
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 2 cut(s) 76, 322
MspR9I CCNGG 2 cut(s) 76, 266
Mva1269I GAATGC 1 cut(s) 159
MvaI CCWGG 1 cut(s) 266
MwoI GCNNNNNNNGC 2 cut(s) 34, 85
NciI CCSGG 1 cut(s) 76
NdeII GATC 4 cut(s) 38, 247, 637, 891
NlaIII CATG 4 cut(s) 248, 320, 644, 834
NlaIV GGNNCC 1 cut(s) 931
NmuCI GTSAC 1 cut(s) 859
PagI TCATGA 2 cut(s) 244, 640
PasI CCCWGGG 1 cut(s) 265
PctI GAATGC 1 cut(s) 159
PdmI GAANNNNTTC 1 cut(s) 214
PfeI GAWTC 4 cut(s) 115, 383, 723, 757
PkrI GCNGC 5 cut(s) 142, 793, 900, 942, 957
PleI GAGTC 1 cut(s) 310
PpsI GAGTC 1 cut(s) 310
Ppu21I YACGTR 1 cut(s) 622
Psp6I CCWGG 1 cut(s) 264
PspGI CCWGG 1 cut(s) 264
PspN4I GGNNCC 1 cut(s) 931
PspPI GGNCC 1 cut(s) 11
RsaI GTAC 2 cut(s) 181, 581
RsaNI GTAC 2 cut(s) 180, 580
RseI CAYNNNNRTG 1 cut(s) 65
SaqAI TTAA 3 cut(s) 407, 482, 773
SatI GCNGC 5 cut(s) 141, 792, 899, 941, 956
Sau3AI GATC 4 cut(s) 38, 247, 637, 891
Sau96I GGNCC 1 cut(s) 11
SchI GAGTC 1 cut(s) 311
ScrFI CCNGG 2 cut(s) 76, 266
SduI GDGCHC 1 cut(s) 651
SfaNI GCATC 1 cut(s) 910
SinI GGWCC 1 cut(s) 11
SmiMI CAYNNNNRTG 1 cut(s) 65
Sse9I AATT 4 cut(s) 92, 210, 453, 769
SsiI CCGC 3 cut(s) 14, 58, 141
SspMI CTAG 4 cut(s) 81, 387, 720, 788
StyD4I CCNGG 2 cut(s) 74, 264
TaaI ACNGT 3 cut(s) 184, 199, 851
TaiI ACGT 1 cut(s) 624
TaqI TCGA 3 cut(s) 167, 218, 810
TaqII GACCGA 1 cut(s) 486
TasI AATT 4 cut(s) 92, 210, 453, 769
TatI WGTACW 2 cut(s) 179, 579
TauI GCSGC 1 cut(s) 143
TfiI GAWTC 4 cut(s) 115, 383, 723, 757
Tru1I TTAA 3 cut(s) 407, 482, 773
Tru9I TTAA 3 cut(s) 407, 482, 773
TscAI CASTG 5 cut(s) 13, 67, 202, 313, 336
TseFI GTSAC 1 cut(s) 859
TseI GCWGC 4 cut(s) 791, 898, 940, 955
Tsp45I GTSAC 1 cut(s) 859
TspDTI ATGAA 2 cut(s) 305, 657
TspGWI ACGGA 2 cut(s) 153, 562
TspRI CASTG 5 cut(s) 13, 67, 202, 313, 336
VneI GTGCAC 1 cut(s) 647
VpaK11BI GGWCC 1 cut(s) 11
XapI RAATTY 3 cut(s) 92, 210, 769
XbaI TCTAGA 1 cut(s) 386
XmnI GAANNNNTTC 1 cut(s) 214
XspI CTAG 4 cut(s) 81, 387, 720, 788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.