SNAP receptor activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04750 AT1G04750 AT1G04750 |
| prunus_persica | Prupe.2G303700_v2.0.a1 Prupe.2G303800_v2.0.a1 |
| pyrus_communis | pycom420g00800 |
| rosa_chinensis | RchiOBHm_Chr1g0355041 RchiOBHm_Chr4g0422051 RchiOBHm_Chr6g0285081 |
| rosa_multiflora | Rmu_sc0026385.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00300740 |
| rosa_samantha | Rh1AG256900 Rh5BG278700 |
| rosa_wichuraiana | Rw1G022640 Rw2G012290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 31 |
| AccII | CGCG | 1 cut(s) | 54 |
| AciI | CCGC | 2 cut(s) | 52, 54 |
| AcsI | RAATTY | 1 cut(s) | 25 |
| AjnI | CCWGG | 1 cut(s) | 102 |
| AluBI | AGCT | 1 cut(s) | 70 |
| AluI | AGCT | 1 cut(s) | 70 |
| AoxI | GGCC | 1 cut(s) | 105 |
| ApoI | RAATTY | 1 cut(s) | 25 |
| AspS9I | GGNCC | 1 cut(s) | 106 |
| AsuHPI | GGTGA | 1 cut(s) | 68 |
| BciT130I | CCWGG | 1 cut(s) | 104 |
| BfmI | CTRYAG | 1 cut(s) | 38 |
| BfuAI | ACCTGC | 1 cut(s) | 31 |
| Bme1390I | CCNGG | 1 cut(s) | 104 |
| BmgT120I | GGNCC | 1 cut(s) | 106 |
| BmrFI | CCNGG | 1 cut(s) | 104 |
| BsaJI | CCNNGG | 3 cut(s) | 52, 102, 233 |
| BseBI | CCWGG | 1 cut(s) | 104 |
| BseDI | CCNNGG | 3 cut(s) | 52, 102, 233 |
| BseGI | GGATG | 1 cut(s) | 5 |
| Bsh1236I | CGCG | 1 cut(s) | 54 |
| BshFI | GGCC | 1 cut(s) | 107 |
| BsnI | GGCC | 1 cut(s) | 107 |
| Bsp143I | GATC | 1 cut(s) | 190 |
| Bsp19I | CCATGG | 1 cut(s) | 233 |
| BspACI | CCGC | 2 cut(s) | 52, 54 |
| BspANI | GGCC | 1 cut(s) | 107 |
| BspFNI | CGCG | 1 cut(s) | 54 |
| BspMAI | CTGCAG | 1 cut(s) | 42 |
| BspMI | ACCTGC | 1 cut(s) | 31 |
| BssECI | CCNNGG | 3 cut(s) | 52, 102, 233 |
| BssMI | GATC | 1 cut(s) | 190 |
| BssT1I | CCWWGG | 1 cut(s) | 233 |
| Bst2UI | CCWGG | 1 cut(s) | 104 |
| BstDSI | CCRYGG | 2 cut(s) | 52, 233 |
| BstF5I | GGATG | 1 cut(s) | 5 |
| BstFNI | CGCG | 1 cut(s) | 54 |
| BstKTI | GATC | 1 cut(s) | 193 |
| BstMBI | GATC | 1 cut(s) | 190 |
| BstNI | CCWGG | 1 cut(s) | 104 |
| BstSCI | CCNGG | 1 cut(s) | 102 |
| BstSFI | CTRYAG | 1 cut(s) | 38 |
| BstUI | CGCG | 1 cut(s) | 54 |
| BsuRI | GGCC | 1 cut(s) | 107 |
| BtgI | CCRYGG | 2 cut(s) | 52, 233 |
| BtsCI | GGATG | 1 cut(s) | 5 |
| BveI | ACCTGC | 1 cut(s) | 31 |
| Cfr13I | GGNCC | 1 cut(s) | 106 |
| Cfr42I | CCGCGG | 1 cut(s) | 55 |
| CviAII | CATG | 2 cut(s) | 20, 234 |
| CviJI | RGCY | 2 cut(s) | 70, 107 |
| CviKI_1 | RGCY | 2 cut(s) | 70, 107 |
| DpnI | GATC | 1 cut(s) | 192 |
| DpnII | GATC | 1 cut(s) | 190 |
| Eco130I | CCWWGG | 1 cut(s) | 233 |
| EcoRII | CCWGG | 1 cut(s) | 102 |
| EcoT14I | CCWWGG | 1 cut(s) | 233 |
| ErhI | CCWWGG | 1 cut(s) | 233 |
| FaeI | CATG | 2 cut(s) | 23, 237 |
| FaiI | YATR | 4 cut(s) | 21, 164, 204, 235 |
| FatI | CATG | 2 cut(s) | 19, 233 |
| HaeIII | GGCC | 1 cut(s) | 107 |
| Hin1II | CATG | 2 cut(s) | 23, 237 |
| HphI | GGTGA | 1 cut(s) | 68 |
| Hpy166II | GTNNAC | 1 cut(s) | 79 |
| Hpy188I | TCNGA | 1 cut(s) | 159 |
| Hpy188III | TCNNGA | 2 cut(s) | 47, 118 |
| Hpy8I | GTNNAC | 1 cut(s) | 79 |
| HpyCH4V | TGCA | 1 cut(s) | 40 |
| Hsp92II | CATG | 2 cut(s) | 23, 237 |
| KspI | CCGCGG | 1 cut(s) | 55 |
| Kzo9I | GATC | 1 cut(s) | 190 |
| LmnI | GCTCC | 1 cut(s) | 104 |
| LpnPI | CCDG | 5 cut(s) | 26, 89, 103, 110, 116 |
| MalI | GATC | 1 cut(s) | 192 |
| MboI | GATC | 1 cut(s) | 190 |
| MboII | GAAGA | 4 cut(s) | 73, 86, 157, 178 |
| MluCI | AATT | 2 cut(s) | 25, 173 |
| MseI | TTAA | 1 cut(s) | 241 |
| MspA1I | CMGCKG | 1 cut(s) | 54 |
| MspR9I | CCNGG | 1 cut(s) | 104 |
| MvaI | CCWGG | 1 cut(s) | 104 |
| MvnI | CGCG | 1 cut(s) | 54 |
| NcoI | CCATGG | 1 cut(s) | 233 |
| NdeII | GATC | 1 cut(s) | 190 |
| NlaIII | CATG | 2 cut(s) | 23, 237 |
| Psp6I | CCWGG | 1 cut(s) | 102 |
| PspGI | CCWGG | 1 cut(s) | 102 |
| PspPI | GGNCC | 1 cut(s) | 106 |
| PstI | CTGCAG | 1 cut(s) | 42 |
| SacII | CCGCGG | 1 cut(s) | 55 |
| SaqAI | TTAA | 1 cut(s) | 241 |
| Sau3AI | GATC | 1 cut(s) | 190 |
| Sau96I | GGNCC | 1 cut(s) | 106 |
| ScrFI | CCNGG | 1 cut(s) | 104 |
| SetI | ASST | 2 cut(s) | 45, 72 |
| SfcI | CTRYAG | 1 cut(s) | 38 |
| Sfr303I | CCGCGG | 1 cut(s) | 55 |
| SgrBI | CCGCGG | 1 cut(s) | 55 |
| Sse9I | AATT | 2 cut(s) | 25, 173 |
| SsiI | CCGC | 2 cut(s) | 52, 54 |
| StyD4I | CCNGG | 1 cut(s) | 102 |
| StyI | CCWWGG | 1 cut(s) | 233 |
| TasI | AATT | 2 cut(s) | 25, 173 |
| Tru1I | TTAA | 1 cut(s) | 241 |
| Tru9I | TTAA | 1 cut(s) | 241 |
| TspDTI | ATGAA | 3 cut(s) | 18, 152, 179 |
| XapI | RAATTY | 1 cut(s) | 25 |