Rh5BG278700

Fanconi-associated nuclease 1 homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
35131221 .. 35132787
1567 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG278700.1

Sequence Viewer

Length: 309 bp
ATGAGTGTGTATCCCAAACAAAAGCTAACCCAGCGCACTCTTCTAGAGTTGAACTTCTGCCCAGTTTCGAAAATTCAAACTTGTTCCTATGACTCTAAAGAACTTGGAACTGATTCAACTCATGATGAGCCATCCGAAAACCGAATCAATAAGGATGAGATTAGTGAAGTGCCAGATTTATATCTTGGTGCAAGCATTCATCTCTCAAGAGATCCAAATAATGTTAAGGATTCCAATTCTATCCAGGTTCTTGACTGTGGTGAGAAGATTGAGCTATTGGTGGATAAGACTGATAACCCAGTGCTGTAG

Protein Analysis

102

Amino Acids

11.48

Weight (kDa)

4.66

Isoelectric Point (pI)

40.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015867)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 206
AcsI RAATTY 1 cut(s) 72
AgsI TTSAA 3 cut(s) 52, 77, 117
AjnI CCWGG 1 cut(s) 243
AluBI AGCT 2 cut(s) 25, 274
AluI AGCT 2 cut(s) 25, 274
AlwI GGATC 1 cut(s) 206
ApoI RAATTY 1 cut(s) 72
Asp700I GAANNNNTTC 1 cut(s) 112
AspLEI GCGC 1 cut(s) 36
AsuHPI GGTGA 1 cut(s) 272
AsuII TTCGAA 1 cut(s) 68
BccI CCATC 1 cut(s) 139
BciT130I CCWGG 1 cut(s) 245
BciVI GTATCC 1 cut(s) 21
BfaI CTAG 1 cut(s) 44
BfmI CTRYAG 1 cut(s) 305
BfuI GTATCC 1 cut(s) 21
Bme1390I CCNGG 1 cut(s) 245
BmrFI CCNGG 1 cut(s) 245
BmrI ACTGGG 2 cut(s) 56, 293
BmuI ACTGGG 2 cut(s) 56, 293
Bpu14I TTCGAA 1 cut(s) 68
BpuEI CTTGAG 1 cut(s) 190
BsaBI GATNNNNATC 1 cut(s) 180
Bse1I ACTGG 2 cut(s) 62, 299
Bse8I GATNNNNATC 1 cut(s) 180
BseBI CCWGG 1 cut(s) 245
BseGI GGATG 2 cut(s) 131, 160
BseJI GATNNNNATC 1 cut(s) 180
BseNI ACTGG 2 cut(s) 62, 299
BseYI CCCAGC 1 cut(s) 30
BsmI GAATGC 1 cut(s) 195
Bsp119I TTCGAA 1 cut(s) 68
Bsp143I GATC 1 cut(s) 211
BspHI TCATGA 1 cut(s) 121
BspPI GGATC 1 cut(s) 206
BspT104I TTCGAA 1 cut(s) 68
BsrI ACTGG 2 cut(s) 62, 299
BssMI GATC 1 cut(s) 211
Bst2UI CCWGG 1 cut(s) 245
Bst4CI ACNGT 1 cut(s) 257
Bst6I CTCTTC 1 cut(s) 45
BstBI TTCGAA 1 cut(s) 68
BstC8I GCNNGC 1 cut(s) 193
BstF5I GGATG 2 cut(s) 131, 160
BstHHI GCGC 1 cut(s) 36
BstKTI GATC 1 cut(s) 214
BstMBI GATC 1 cut(s) 211
BstMWI GCNNNNNNNGC 1 cut(s) 31
BstNI CCWGG 1 cut(s) 245
BstSCI CCNGG 1 cut(s) 243
BstSFI CTRYAG 1 cut(s) 305
BstX2I RGATCY 1 cut(s) 211
BstYI RGATCY 1 cut(s) 211
BsuI GTATCC 1 cut(s) 21
BtsCI GGATG 2 cut(s) 131, 160
BtsIMutI CAGTG 1 cut(s) 306
Cac8I GCNNGC 1 cut(s) 193
CciI TCATGA 1 cut(s) 121
CfoI GCGC 1 cut(s) 36
CviAII CATG 1 cut(s) 122
CviJI RGCY 3 cut(s) 25, 130, 274
CviKI_1 RGCY 3 cut(s) 25, 130, 274
DpnI GATC 1 cut(s) 213
DpnII GATC 1 cut(s) 211
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
EcoRII CCWGG 1 cut(s) 243
FaeI CATG 1 cut(s) 125
FaiI YATR 3 cut(s) 90, 123, 181
FatI CATG 1 cut(s) 121
FokI GGATG 2 cut(s) 118, 167
FspBI CTAG 1 cut(s) 44
GlaI GCGC 1 cut(s) 35
GsaI CCCAGC 1 cut(s) 34
HhaI GCGC 1 cut(s) 36
Hin1II CATG 1 cut(s) 125
Hin6I GCGC 1 cut(s) 34
HinP1I GCGC 1 cut(s) 34
HinfI GANTC 4 cut(s) 92, 113, 144, 230
HphI GGTGA 1 cut(s) 272
Hpy188I TCNGA 1 cut(s) 136
Hpy188III TCNNGA 4 cut(s) 44, 122, 207, 251
HpyCH4III ACNGT 1 cut(s) 257
HpyCH4V TGCA 1 cut(s) 191
HpyF10VI GCNNNNNNNGC 1 cut(s) 31
Hsp92II CATG 1 cut(s) 125
HspAI GCGC 1 cut(s) 34
Kzo9I GATC 1 cut(s) 211
LpnPI CCDG 5 cut(s) 44, 75, 186, 230, 257
MaeI CTAG 1 cut(s) 44
MalI GATC 1 cut(s) 213
MboI GATC 1 cut(s) 211
MboII GAAGA 2 cut(s) 32, 277
MflI RGATCY 1 cut(s) 211
MluCI AATT 2 cut(s) 72, 235
MlyI GAGTC 1 cut(s) 86
MroXI GAANNNNTTC 1 cut(s) 112
MseI TTAA 1 cut(s) 225
MspR9I CCNGG 1 cut(s) 245
Mva1269I GAATGC 1 cut(s) 195
MvaI CCWGG 1 cut(s) 245
MwoI GCNNNNNNNGC 1 cut(s) 31
NdeII GATC 1 cut(s) 211
NlaIII CATG 1 cut(s) 125
NspV TTCGAA 1 cut(s) 68
PagI TCATGA 1 cut(s) 121
PctI GAATGC 1 cut(s) 195
PdmI GAANNNNTTC 1 cut(s) 112
PfeI GAWTC 3 cut(s) 113, 144, 230
PleI GAGTC 1 cut(s) 86
PpsI GAGTC 1 cut(s) 86
Psp6I CCWGG 1 cut(s) 243
PspFI CCCAGC 1 cut(s) 30
PspGI CCWGG 1 cut(s) 243
PsuI RGATCY 1 cut(s) 211
SaqAI TTAA 1 cut(s) 225
Sau3AI GATC 1 cut(s) 211
SchI GAGTC 1 cut(s) 86
ScrFI CCNGG 1 cut(s) 245
SetI ASST 3 cut(s) 27, 249, 276
SfcI CTRYAG 1 cut(s) 305
SfuI TTCGAA 1 cut(s) 68
SmlI CTYRAG 1 cut(s) 205
SmoI CTYRAG 1 cut(s) 205
Sse9I AATT 2 cut(s) 72, 235
SspMI CTAG 1 cut(s) 44
StyD4I CCNGG 1 cut(s) 243
TaaI ACNGT 1 cut(s) 257
TaqI TCGA 1 cut(s) 68
TasI AATT 2 cut(s) 72, 235
TfiI GAWTC 3 cut(s) 113, 144, 230
Tru1I TTAA 1 cut(s) 225
Tru9I TTAA 1 cut(s) 225
TscAI CASTG 1 cut(s) 306
TspDTI ATGAA 1 cut(s) 188
TspRI CASTG 1 cut(s) 306
XapI RAATTY 1 cut(s) 72
XbaI TCTAGA 1 cut(s) 43
XmnI GAANNNNTTC 1 cut(s) 112
XspI CTAG 1 cut(s) 44
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.