Prupe.2G309200_v2.0.a1

PP2A regulatory subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
29301037 .. 29303991
2955 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G309200.1

Sequence Viewer

Length: 1212 bp
ATGGGTGAATTTAACATGGAGGATATGCCTCTACCCGCTCTCTTCGAGCAAGCTCAGAAGATCCATCTAACAGCGACAGAGTCCGGCGATGTTGATCAGGAGGTGGTGAGGAAGGGATGCAAGGCTTTGGAGAAGTGCGATGAAATGATAAGCAAGCTGGGCTTGTTCTCAACCAACGAGACCAAGGAGGATATCAGCACCACCAATCTCAAATATCTTCTGGTGCCATATTATCTTGGTGAGTTAACTGAAAAAGTTGCACAGGATGACAGGATACAGATTCTTAAGGCATCCCAGGCTAAGTTAAAGGAATTTATATCGTTTTGTGAGGCAATGGAACTTGTACCTGAAGAGGAGTTACAAACATCTGCGCCAGATGGCCCAAATTCACTTGTTGATAGAAGAGCTCTGAAGATTGCTCGATTCAAACGCCAAAGAGCTGCAGAATCAAAATTGTTGGAAATTAAGGAGCGGAAAGAGCGAAGAGGGCGTTCAACTAAAGCAGCTGCCTTGTCAACTCCTATTGAGGCAGGAGAGGAAGATGTGCTGGATGATGATGGAGAGGAGGAGCGAGAGGCTTGGTTTACTACTATCTCTTTGGCAGTTTGTAAGGCTTTTGATCTGCTGGAGATGCTAAAGAAAGAGGAAGAGATGCTTCAGGCTTTTAAGGAAAGGCAGTCACAGGATGGGAACAAGGAATTTTATCAAGATGTTCTTGATGATCGGGCCAAGAGGGCGGAAGCTTGGCATCGTGATGCTGCTGCTCGAGTGCAGTATACCAGACCATCCGAGCCTATCACATGTGCAACTTTTGCTCAAGATGTTCTAGAAGGGAGAGCAAGTGTATCGCAGATGCATGAACATAAACACCAGCCACTAATATTTGGACCAGCGAGTCTTGTAGGTGGAAATCCAACAAGTGAGAGGGAAAGGATGGCAGCTCAGGTGTTCCAGCCCAGTCATAGGTTGCCCACCATGAGCATAGAGGAAGCTGGGCTGAAGGAGATGGAGATAATGAATACATGGCAAGAGAGGAATGTTAAACTTATGGAAGAAGCCAATTCTGCATGGTACAAGGAGAGTAGGAAACCAGGACCGCCTGAGGAGGATGAAGATGATGATGCTGCTCAAGATAAGGCGAGGGCATGGGATGACTGGAAAGATGATAATCCTCGGGGTGCTGGCAATAAGAAGCTCACCCCTTGTGGATAA

Protein Analysis

404

Amino Acids

45.77

Weight (kDa)

4.92

Isoelectric Point (pI)

48.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 894
AccB1I GGYRCC 1 cut(s) 223
AccBSI CCGCTC 2 cut(s) 38, 472
AccI GTMKAC 1 cut(s) 776
AciI CCGC 4 cut(s) 36, 472, 737, 1097
AclWI GGATC 1 cut(s) 55
AcsI RAATTY 4 cut(s) 8, 311, 385, 698
AcuI CTGAAG 4 cut(s) 369, 431, 641, 1019
AfaI GTAC 2 cut(s) 345, 1073
AfiI CCNNNNNNNGG 1 cut(s) 963
AflII CTTAAG 1 cut(s) 284
AflIII ACRYGT 1 cut(s) 800
AgsI TTSAA 2 cut(s) 427, 495
AjnI CCWGG 2 cut(s) 294, 1090
AluBI AGCT 9 cut(s) 53, 157, 407, 440, 506, 743, 941, 992, 1195
AluI AGCT 9 cut(s) 53, 157, 407, 440, 506, 743, 941, 992, 1195
Alw21I GWGCWC 1 cut(s) 409
Alw26I GTCTC 1 cut(s) 173
AlwI GGATC 1 cut(s) 55
Ama87I CYCGRG 2 cut(s) 765, 1173
AoxI GGCC 2 cut(s) 379, 726
ApeKI GCWGC 7 cut(s) 440, 503, 506, 758, 761, 938, 1124
ApoI RAATTY 4 cut(s) 8, 311, 385, 698
AspLEI GCGC 1 cut(s) 373
AspS9I GGNCC 4 cut(s) 380, 726, 887, 1094
AsuHPI GGTGA 4 cut(s) 17, 118, 251, 1189
AvaI CYCGRG 2 cut(s) 765, 1173
AvaII GGWCC 2 cut(s) 887, 1094
AxyI CCTNAGG 1 cut(s) 1101
BanI GGYRCC 1 cut(s) 223
BanII GRGCYC 1 cut(s) 409
BarI GAAGNNNNNNTAC 2 cut(s) 342, 374
Bbv12I GWGCWC 1 cut(s) 409
BbvI GCAGC 7 cut(s) 427, 493, 515, 745, 748, 950, 1111
BccI CCATC 7 cut(s) 72, 371, 551, 680, 793, 928, 1000
BcgI CGANNNNNNTGC 2 cut(s) 828, 862
BciT130I CCWGG 2 cut(s) 296, 1092
BciVI GTATCC 1 cut(s) 267
BclI TGATCA 1 cut(s) 94
BcoDI GTCTC 1 cut(s) 173
BfaI CTAG 1 cut(s) 827
BfmI CTRYAG 1 cut(s) 441
BfrI CTTAAG 1 cut(s) 284
BfuI GTATCC 1 cut(s) 267
BglI GCCNNNNNGGC 1 cut(s) 734
BisI GCNGC 7 cut(s) 441, 504, 507, 759, 762, 939, 1125
BlsI GCNGC 7 cut(s) 442, 505, 508, 760, 763, 940, 1126
Bme1390I CCNGG 2 cut(s) 296, 1092
Bme18I GGWCC 2 cut(s) 887, 1094
BmeT110I CYCGRG 2 cut(s) 765, 1173
BmgT120I GGNCC 4 cut(s) 380, 726, 887, 1094
BmiI GGNNCC 1 cut(s) 225
BmrFI CCNGG 2 cut(s) 296, 1092
BmrI ACTGGG 1 cut(s) 951
BmsI GCATC 8 cut(s) 107, 299, 621, 642, 745, 757, 843, 1111
BmuI ACTGGG 1 cut(s) 951
BpmI CTGGAG 1 cut(s) 647
Bpu10I CCTNAGC 1 cut(s) 942
BpuEI CTTGAG 2 cut(s) 801, 1113
BsaBI GATNNNNATC 2 cut(s) 93, 1167
BsaI GGTCTC 1 cut(s) 173
BsaJI CCNNGG 3 cut(s) 183, 294, 1172
BsaXI ACNNNNNCTCC 2 cut(s) 826, 856
Bsc4I CCNNNNNNNGG 1 cut(s) 963
Bse1I ACTGG 2 cut(s) 957, 1160
Bse21I CCTNAGG 1 cut(s) 1101
Bse3DI GCAATG 1 cut(s) 339
Bse8I GATNNNNATC 2 cut(s) 93, 1167
BseBI CCWGG 2 cut(s) 296, 1092
BseDI CCNNGG 3 cut(s) 183, 294, 1172
BseGI GGATG 9 cut(s) 122, 271, 290, 556, 691, 785, 939, 1114, 1156
BseJI GATNNNNATC 2 cut(s) 93, 1167
BseLI CCNNNNNNNGG 1 cut(s) 963
BseMI GCAATG 1 cut(s) 339
BseMII CTCAG 3 cut(s) 68, 956, 1092
BseNI ACTGG 2 cut(s) 957, 1160
BseRI GAGGAG 4 cut(s) 368, 578, 581, 1118
BseXI GCAGC 7 cut(s) 427, 493, 515, 745, 748, 950, 1111
BseYI CCCAGC 2 cut(s) 157, 992
BsgI GTGCAG 1 cut(s) 791
BshFI GGCC 2 cut(s) 381, 728
BshNI GGYRCC 1 cut(s) 223
BsiHKAI GWGCWC 1 cut(s) 409
BsiHKCI CYCGRG 2 cut(s) 765, 1173
BsiSI CCGG 1 cut(s) 84
BslI CCNNNNNNNGG 1 cut(s) 963
BsmAI GTCTC 1 cut(s) 173
BsnI GGCC 2 cut(s) 381, 728
Bso31I GGTCTC 1 cut(s) 173
BsoBI CYCGRG 2 cut(s) 765, 1173
Bsp1286I GDGCHC 1 cut(s) 409
Bsp143I GATC 4 cut(s) 60, 94, 619, 721
BspACI CCGC 4 cut(s) 36, 472, 737, 1097
BspANI GGCC 2 cut(s) 381, 728
BspCNI CTCAG 3 cut(s) 67, 955, 1093
BspLI GGNNCC 1 cut(s) 225
BspMAI CTGCAG 1 cut(s) 445
BspPI GGATC 1 cut(s) 55
BspQI GCTCTTC 1 cut(s) 397
BspT107I GGYRCC 1 cut(s) 223
BspTI CTTAAG 1 cut(s) 284
BspTNI GGTCTC 1 cut(s) 173
BsrBI CCGCTC 2 cut(s) 38, 472
BsrDI GCAATG 1 cut(s) 339
BsrI ACTGG 2 cut(s) 957, 1160
BssECI CCNNGG 3 cut(s) 183, 294, 1172
BssMI GATC 4 cut(s) 60, 94, 619, 721
BssNAI GTATAC 1 cut(s) 777
BssT1I CCWWGG 1 cut(s) 183
Bst1107I GTATAC 1 cut(s) 777
Bst2UI CCWGG 2 cut(s) 296, 1092
Bst6I CTCTTC 5 cut(s) 47, 345, 397, 478, 642
BstAFI CTTAAG 1 cut(s) 284
BstAPI GCANNNNNTGC 1 cut(s) 812
BstC8I GCNNGC 3 cut(s) 51, 155, 1183
BstDEI CTNAG 4 cut(s) 54, 300, 942, 1101
BstF5I GGATG 9 cut(s) 122, 271, 290, 556, 691, 785, 939, 1114, 1156
BstHHI GCGC 1 cut(s) 373
BstKTI GATC 4 cut(s) 63, 97, 622, 724
BstMAI GTCTC 1 cut(s) 173
BstMBI GATC 4 cut(s) 60, 94, 619, 721
BstMWI GCNNNNNNNGC 8 cut(s) 159, 296, 478, 487, 631, 734, 812, 1064
BstNI CCWGG 2 cut(s) 296, 1092
BstNSI RCATGY 1 cut(s) 804
BstSCI CCNGG 2 cut(s) 294, 1090
BstSFI CTRYAG 1 cut(s) 441
BstV1I GCAGC 7 cut(s) 427, 493, 515, 745, 748, 950, 1111
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
BstZ17I GTATAC 1 cut(s) 777
Bsu36I CCTNAGG 1 cut(s) 1101
BsuI GTATCC 1 cut(s) 267
BsuRI GGCC 2 cut(s) 381, 728
BtgZI GCGATG 2 cut(s) 102, 153
BtsCI GGATG 9 cut(s) 122, 271, 290, 556, 691, 785, 939, 1114, 1156
Cac8I GCNNGC 3 cut(s) 51, 155, 1183
CfoI GCGC 1 cut(s) 373
Cfr13I GGNCC 4 cut(s) 380, 726, 887, 1094
Csp6I GTAC 2 cut(s) 344, 1072
CviAII CATG 7 cut(s) 16, 801, 857, 976, 1023, 1068, 1146
CviQI GTAC 2 cut(s) 344, 1072
DdeI CTNAG 4 cut(s) 54, 300, 942, 1101
DpnI GATC 4 cut(s) 62, 96, 621, 723
DpnII GATC 4 cut(s) 60, 94, 619, 721
DrdI GACNNNNNNGTC 1 cut(s) 894
DseDI GACNNNNNNGTC 1 cut(s) 894
Eam1104I CTCTTC 5 cut(s) 47, 345, 397, 478, 642
EarI CTCTTC 5 cut(s) 47, 345, 397, 478, 642
EciI GGCGGA 1 cut(s) 752
Ecl136II GAGCTC 1 cut(s) 407
Eco130I CCWWGG 1 cut(s) 183
Eco24I GRGCYC 1 cut(s) 409
Eco31I GGTCTC 1 cut(s) 173
Eco32I GATATC 1 cut(s) 193
Eco47I GGWCC 2 cut(s) 887, 1094
Eco53kI GAGCTC 1 cut(s) 407
Eco57I CTGAAG 4 cut(s) 369, 431, 641, 1019
Eco81I CCTNAGG 1 cut(s) 1101
Eco88I CYCGRG 2 cut(s) 765, 1173
EcoICRI GAGCTC 1 cut(s) 407
EcoRII CCWGG 2 cut(s) 294, 1090
EcoRV GATATC 1 cut(s) 193
EcoT14I CCWWGG 1 cut(s) 183
EcoT22I ATGCAT 1 cut(s) 858
EcoT38I GRGCYC 1 cut(s) 409
ErhI CCWWGG 1 cut(s) 183
FaeI CATG 7 cut(s) 19, 804, 860, 979, 1026, 1071, 1149
FalI AAGNNNNNCTT 6 cut(s) 146, 178, 639, 671, 699, 731
FatI CATG 7 cut(s) 15, 800, 856, 975, 1022, 1067, 1145
FauI CCCGC 1 cut(s) 43
FbaI TGATCA 1 cut(s) 94
FblI GTMKAC 1 cut(s) 776
Fnu4HI GCNGC 7 cut(s) 441, 504, 507, 759, 762, 939, 1125
FokI GGATG 9 cut(s) 129, 277, 278, 563, 698, 772, 946, 1121, 1163
FriOI GRGCYC 1 cut(s) 409
Fsp4HI GCNGC 7 cut(s) 441, 504, 507, 759, 762, 939, 1125
FspBI CTAG 1 cut(s) 827
GlaI GCGC 1 cut(s) 372
GluI GCNGC 7 cut(s) 441, 504, 507, 759, 762, 939, 1125
GsaI CCCAGC 2 cut(s) 161, 996
GsuI CTGGAG 1 cut(s) 647
HaeIII GGCC 2 cut(s) 381, 728
HapII CCGG 1 cut(s) 84
HhaI GCGC 1 cut(s) 373
Hin1II CATG 7 cut(s) 19, 804, 860, 979, 1026, 1071, 1149
Hin6I GCGC 1 cut(s) 371
HinP1I GCGC 1 cut(s) 371
HincII GTYRAC 2 cut(s) 246, 516
HindII GTYRAC 2 cut(s) 246, 516
HindIII AAGCTT 1 cut(s) 741
HinfI GANTC 5 cut(s) 80, 280, 423, 446, 895
HpaI GTTAAC 1 cut(s) 246
HpaII CCGG 1 cut(s) 84
HphI GGTGA 4 cut(s) 17, 118, 251, 1189
Hpy166II GTNNAC 4 cut(s) 246, 516, 585, 777
Hpy188I TCNGA 3 cut(s) 57, 411, 790
Hpy188III TCNNGA 7 cut(s) 98, 707, 716, 752, 818, 827, 1130
Hpy8I GTNNAC 4 cut(s) 246, 516, 585, 777
HpyAV CCTTC 3 cut(s) 106, 824, 994
HpyCH4V TGCA 7 cut(s) 120, 260, 443, 772, 806, 856, 1067
HpyF10VI GCNNNNNNNGC 8 cut(s) 159, 296, 478, 487, 631, 734, 812, 1064
HpyF3I CTNAG 4 cut(s) 54, 300, 942, 1101
Hsp92II CATG 7 cut(s) 19, 804, 860, 979, 1026, 1071, 1149
HspAI GCGC 1 cut(s) 371
Ksp22I TGATCA 1 cut(s) 94
KspAI GTTAAC 1 cut(s) 246
Kzo9I GATC 4 cut(s) 60, 94, 619, 721
LguI GCTCTTC 1 cut(s) 397
LmnI GCTCC 2 cut(s) 469, 568
Lsp1109I GCAGC 7 cut(s) 427, 493, 515, 745, 748, 950, 1111
LweI GCATC 8 cut(s) 107, 299, 621, 642, 745, 757, 843, 1111
MaeI CTAG 1 cut(s) 827
MaeIII GTNAC 2 cut(s) 357, 678
MalI GATC 4 cut(s) 62, 96, 621, 723
MbiI CCGCTC 2 cut(s) 38, 472
MboI GATC 4 cut(s) 60, 94, 619, 721
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 1 cut(s) 409
MluCI AATT 7 cut(s) 8, 311, 385, 452, 462, 698, 1060
MlyI GAGTC 2 cut(s) 89, 904
MmeI TCCRAC 2 cut(s) 438, 938
Mph1103I ATGCAT 1 cut(s) 858
MseI TTAA 7 cut(s) 12, 245, 285, 305, 465, 666, 1041
MslI CAYNNNNRTG 1 cut(s) 753
MspA1I CMGCKG 1 cut(s) 506
MspCI CTTAAG 1 cut(s) 284
MspI CCGG 1 cut(s) 84
MspR9I CCNGG 2 cut(s) 296, 1092
MvaI CCWGG 2 cut(s) 296, 1092
MwoI GCNNNNNNNGC 8 cut(s) 159, 296, 478, 487, 631, 734, 812, 1064
NdeII GATC 4 cut(s) 60, 94, 619, 721
NlaIII CATG 7 cut(s) 19, 804, 860, 979, 1026, 1071, 1149
NlaIV GGNNCC 1 cut(s) 225
NmuCI GTSAC 1 cut(s) 678
NsiI ATGCAT 1 cut(s) 858
NspI RCATGY 1 cut(s) 804
PaeR7I CTCGAG 1 cut(s) 765
PciI ACATGT 1 cut(s) 800
PciSI GCTCTTC 1 cut(s) 397
PfeI GAWTC 3 cut(s) 280, 423, 446
PflFI GACNNNGTC 1 cut(s) 79
PkrI GCNGC 7 cut(s) 442, 505, 508, 760, 763, 940, 1126
PleI GAGTC 2 cut(s) 88, 903
PpsI GAGTC 2 cut(s) 88, 903
PscI ACATGT 1 cut(s) 800
Psp124BI GAGCTC 1 cut(s) 409
Psp6I CCWGG 2 cut(s) 294, 1090
PspFI CCCAGC 2 cut(s) 157, 992
PspGI CCWGG 2 cut(s) 294, 1090
PspN4I GGNNCC 1 cut(s) 225
PspPI GGNCC 4 cut(s) 380, 726, 887, 1094
PspXI VCTCGAGB 1 cut(s) 765
PstI CTGCAG 1 cut(s) 445
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 1 cut(s) 79
PvuII CAGCTG 1 cut(s) 506
RsaI GTAC 2 cut(s) 345, 1073
RsaNI GTAC 2 cut(s) 344, 1072
RseI CAYNNNNRTG 1 cut(s) 753
SacI GAGCTC 1 cut(s) 409
SapI GCTCTTC 1 cut(s) 397
SaqAI TTAA 7 cut(s) 12, 245, 285, 305, 465, 666, 1041
SatI GCNGC 7 cut(s) 441, 504, 507, 759, 762, 939, 1125
Sau3AI GATC 4 cut(s) 60, 94, 619, 721
Sau96I GGNCC 4 cut(s) 380, 726, 887, 1094
SchI GAGTC 2 cut(s) 89, 904
ScrFI CCNGG 2 cut(s) 296, 1092
SduI GDGCHC 1 cut(s) 409
SfaNI GCATC 8 cut(s) 107, 299, 621, 642, 745, 757, 843, 1111
SfcI CTRYAG 1 cut(s) 441
Sfr274I CTCGAG 1 cut(s) 765
SinI GGWCC 2 cut(s) 887, 1094
SlaI CTCGAG 1 cut(s) 765
SmiMI CAYNNNNRTG 1 cut(s) 753
SmlI CTYRAG 4 cut(s) 284, 765, 816, 1128
SmoI CTYRAG 4 cut(s) 284, 765, 816, 1128
Sse9I AATT 7 cut(s) 8, 311, 385, 452, 462, 698, 1060
SsiI CCGC 4 cut(s) 36, 472, 737, 1097
SspI AATATT 1 cut(s) 882
SspMI CTAG 1 cut(s) 827
SstI GAGCTC 1 cut(s) 409
StyD4I CCNGG 2 cut(s) 294, 1090
StyI CCWWGG 1 cut(s) 183
TaqI TCGA 3 cut(s) 45, 421, 766
TasI AATT 7 cut(s) 8, 311, 385, 452, 462, 698, 1060
TfiI GAWTC 3 cut(s) 280, 423, 446
Tru1I TTAA 7 cut(s) 12, 245, 285, 305, 465, 666, 1041
Tru9I TTAA 7 cut(s) 12, 245, 285, 305, 465, 666, 1041
TseFI GTSAC 1 cut(s) 678
TseI GCWGC 7 cut(s) 440, 503, 506, 758, 761, 938, 1124
Tsp45I GTSAC 1 cut(s) 678
TspDTI ATGAA 4 cut(s) 156, 873, 1031, 1125
Tth111I GACNNNGTC 1 cut(s) 79
Vha464I CTTAAG 1 cut(s) 284
VpaK11BI GGWCC 2 cut(s) 887, 1094
XapI RAATTY 4 cut(s) 8, 311, 385, 698
XbaI TCTAGA 1 cut(s) 826
XceI RCATGY 1 cut(s) 804
XhoI CTCGAG 1 cut(s) 765
XmiI GTMKAC 1 cut(s) 776
XspI CTAG 1 cut(s) 827
Zsp2I ATGCAT 1 cut(s) 858
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.