pycom07g26040

PP2A regulatory subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
26161525 .. 26163915
2391 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g26040.5

Sequence Viewer

Length: 1221 bp
ATGGGAGAATTGACTATGGAAGACATGCCTCTTCCGGCGCTCTTCGAGCAAGCTCGGAAGATCCATGTGGCGGCGACGGAGTCCGGGGGTGGTGTCGATCAGGAGGAGGTGAGGAAGGGATGCAGGGTGTTGGAGAAGTGCGATGAAATGATAAGCAAGCTGGGTTTGTTCTCAGCCAATGAGACCAAGGAGGATATCAGCACCACCAATCTCAAATATCTTATGGTGCCGTATTATCTCGGTGAATTAACCGAAAAGGTTGCGCAGGATGACAGGATATTGATTCTTAAGGCTTCCCAGGCTAAATTAAAGGAGTTTATTTCAATTTGCGAGGCAATGGAACTTGTTCCGAAAGAGGAGTTAGAAGCATCTGCAGTTGATGGCCCAAATTCACATGTTGATCGAAGGGCTCTGAAGATTGCCCGATTCAAAAGGCAAAGAGCTGCAGAATCAAAATTGCTGGAAATTAAGGAGCGGAAAGAGCGAAGAGGTCGTTCAACTAAAGCATCTGCCTTGTCAACTCCTATTGAGGCAGGAGAGGAAGATGTGCTGGATGATGACGGAGAGGAGGAGCGGGAGGCGTGGTTTACTACAGTCTCTTTGGCAGTTAGCAAGACTTTTGATCTGTTGGAGATGCTAAAGAAAGAGGAAGAAATGCTTGTAGCTTTTAAGGAAAGGCAATCAAAGGATGGCGGGAAGGAATTTTATCAAGAAGTTCTTGACGATCGTGCCAAAAGGGCCGAGGCTTGGCATCGTGATGCTGCAACCCGGGTGCAGTATAGTAGGCCAGCAGAGCCTATCACCTGTGCAACTTTTGCTCAAGATGTTCTAGAAGGGAGAGCCAGGGTTTCAGAGATGCATGAACACAAGCACCAGCCACTAATATTTGGACCAGCGAGTCTTATTGGTGGAAACCCAACAAGTGAGAGGGAAAGGATGGCGGCTCAGGTTTTCCAGCCCAGTCATAGGATGCCGACCATGAGCATAGAGGAAGCTGGACTGAAGGAGATGGAGATAATGAATACGTGGCAAGAGAGGAATGTGAAACTCATGGAAGAAGCCAATTCTGCATGGTACAAGGAACCTATGAAACCAGGACCACCGCCGGAGGGGGAAGAGGAAGATGATGATGCCGCTCAAGACAGGGCGAGGGCATGGGATGACTGGAAAGATGATAATCCTCGGGGTGCTGGCAACAAGAAGCTCACTCCCTGTGGATAA

Protein Analysis

407

Amino Acids

45.96

Weight (kDa)

5.04

Isoelectric Point (pI)

46.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 897
Acc16I TGCGCA 1 cut(s) 264
AccB1I GGYRCC 1 cut(s) 226
AccBSI CCGCTC 3 cut(s) 475, 574, 1136
AciI CCGC 7 cut(s) 71, 475, 574, 693, 941, 1103, 1134
AclWI GGATC 1 cut(s) 55
AcsI RAATTY 2 cut(s) 388, 701
AcuI CTGAAG 2 cut(s) 434, 1022
AfaI GTAC 1 cut(s) 1076
AfiI CCNNNNNNNGG 4 cut(s) 70, 747, 966, 1109
AflII CTTAAG 1 cut(s) 287
AflIII ACRYGT 1 cut(s) 394
AgsI TTSAA 3 cut(s) 324, 430, 498
AjnI CCWGG 3 cut(s) 297, 842, 1093
AluBI AGCT 6 cut(s) 53, 160, 443, 665, 995, 1204
AluI AGCT 6 cut(s) 53, 160, 443, 665, 995, 1204
Alw26I GTCTC 2 cut(s) 176, 601
AlwI GGATC 1 cut(s) 55
Ama87I CYCGRG 2 cut(s) 768, 1182
AoxI GGCC 3 cut(s) 382, 738, 785
ApeKI GCWGC 2 cut(s) 443, 761
ApoI RAATTY 2 cut(s) 388, 701
Asp700I GAANNNNTTC 1 cut(s) 345
AspLEI GCGC 2 cut(s) 40, 265
AspS9I GGNCC 4 cut(s) 383, 738, 890, 1097
AsuC2I CCSGG 3 cut(s) 85, 769, 770
AsuHPI GGTGA 3 cut(s) 121, 254, 793
AvaI CYCGRG 2 cut(s) 768, 1182
AvaII GGWCC 2 cut(s) 890, 1097
BanI GGYRCC 1 cut(s) 226
BanII GRGCYC 1 cut(s) 412
BbsI GAAGAC 1 cut(s) 27
BbvI GCAGC 2 cut(s) 430, 748
BccI CCATC 4 cut(s) 374, 683, 931, 1003
BceAI ACGGC 1 cut(s) 214
BcgI CGANNNNNNTGC 2 cut(s) 242, 276
BciT130I CCWGG 3 cut(s) 299, 844, 1095
BcnI CCSGG 3 cut(s) 85, 769, 770
BcoDI GTCTC 2 cut(s) 176, 601
BfaI CTAG 1 cut(s) 830
BfmI CTRYAG 3 cut(s) 372, 444, 591
BfoI RGCGCY 1 cut(s) 41
BfrI CTTAAG 1 cut(s) 287
BglI GCCNNNNNGGC 1 cut(s) 737
BisI GCNGC 5 cut(s) 72, 444, 762, 942, 1134
BlsI GCNGC 5 cut(s) 73, 445, 763, 943, 1135
Bme1390I CCNGG 6 cut(s) 85, 299, 769, 770, 844, 1095
Bme18I GGWCC 2 cut(s) 890, 1097
BmeT110I CYCGRG 2 cut(s) 768, 1182
BmgT120I GGNCC 4 cut(s) 383, 738, 890, 1097
BmiI GGNNCC 2 cut(s) 228, 1083
BmrFI CCNGG 6 cut(s) 85, 299, 769, 770, 844, 1095
BmrI ACTGGG 1 cut(s) 954
BmsI GCATC 9 cut(s) 110, 377, 515, 624, 748, 760, 846, 960, 1120
BmuI ACTGGG 1 cut(s) 954
BpiI GAAGAC 1 cut(s) 27
Bpu10I CCTNAGC 1 cut(s) 945
BpuEI CTTGAG 2 cut(s) 804, 1122
BpuMI CCSGG 3 cut(s) 85, 769, 770
BsaAI YACGTR 1 cut(s) 1026
BsaBI GATNNNNATC 1 cut(s) 1176
BsaI GGTCTC 1 cut(s) 176
BsaJI CCNNGG 7 cut(s) 84, 186, 297, 741, 768, 843, 1181
BsaXI ACNNNNNCTCC 2 cut(s) 569, 599
Bsc4I CCNNNNNNNGG 4 cut(s) 70, 747, 966, 1109
Bse1I ACTGG 2 cut(s) 960, 1169
Bse3DI GCAATG 1 cut(s) 342
Bse8I GATNNNNATC 1 cut(s) 1176
BseBI CCWGG 3 cut(s) 299, 844, 1095
BseDI CCNNGG 7 cut(s) 84, 186, 297, 741, 768, 843, 1181
BseGI GGATG 7 cut(s) 125, 274, 559, 694, 942, 975, 1165
BseJI GATNNNNATC 1 cut(s) 1176
BseLI CCNNNNNNNGG 4 cut(s) 70, 747, 966, 1109
BseMI GCAATG 1 cut(s) 342
BseMII CTCAG 2 cut(s) 186, 959
BseNI ACTGG 2 cut(s) 960, 1169
BseRI GAGGAG 4 cut(s) 119, 371, 581, 584
BseXI GCAGC 2 cut(s) 430, 748
BseYI CCCAGC 1 cut(s) 160
BsgI GTGCAG 1 cut(s) 794
Bsh1285I CGRYCG 1 cut(s) 727
BshFI GGCC 3 cut(s) 384, 740, 787
BshNI GGYRCC 1 cut(s) 226
BsiEI CGRYCG 1 cut(s) 727
BsiHKCI CYCGRG 2 cut(s) 768, 1182
BsiSI CCGG 4 cut(s) 35, 84, 769, 1106
BslI CCNNNNNNNGG 4 cut(s) 70, 747, 966, 1109
BsmAI GTCTC 2 cut(s) 176, 601
BsnI GGCC 3 cut(s) 384, 740, 787
Bso31I GGTCTC 1 cut(s) 176
BsoBI CYCGRG 2 cut(s) 768, 1182
Bsp1286I GDGCHC 1 cut(s) 412
Bsp143I GATC 5 cut(s) 60, 97, 400, 622, 724
BspACI CCGC 7 cut(s) 71, 475, 574, 693, 941, 1103, 1134
BspANI GGCC 3 cut(s) 384, 740, 787
BspCNI CTCAG 2 cut(s) 185, 958
BspLI GGNNCC 2 cut(s) 228, 1083
BspMAI CTGCAG 2 cut(s) 376, 448
BspPI GGATC 1 cut(s) 55
BspQI GCTCTTC 1 cut(s) 47
BspT107I GGYRCC 1 cut(s) 226
BspTI CTTAAG 1 cut(s) 287
BspTNI GGTCTC 1 cut(s) 176
BsrBI CCGCTC 3 cut(s) 475, 574, 1136
BsrDI GCAATG 1 cut(s) 342
BsrI ACTGG 2 cut(s) 960, 1169
BssECI CCNNGG 7 cut(s) 84, 186, 297, 741, 768, 843, 1181
BssMI GATC 5 cut(s) 60, 97, 400, 622, 724
BssT1I CCWWGG 1 cut(s) 186
Bst2UI CCWGG 3 cut(s) 299, 844, 1095
Bst4CI ACNGT 1 cut(s) 595
Bst6I CTCTTC 4 cut(s) 36, 47, 481, 1110
BstAFI CTTAAG 1 cut(s) 287
BstAPI GCANNNNNTGC 1 cut(s) 815
BstBAI YACGTR 1 cut(s) 1026
BstC8I GCNNGC 4 cut(s) 51, 158, 789, 1192
BstDEI CTNAG 2 cut(s) 172, 945
BstF5I GGATG 7 cut(s) 125, 274, 559, 694, 942, 975, 1165
BstH2I RGCGCY 1 cut(s) 41
BstHHI GCGC 2 cut(s) 40, 265
BstKTI GATC 5 cut(s) 63, 100, 403, 625, 727
BstMAI GTCTC 2 cut(s) 176, 601
BstMBI GATC 5 cut(s) 60, 97, 400, 622, 724
BstMCI CGRYCG 1 cut(s) 727
BstMWI GCNNNNNNNGC 7 cut(s) 46, 299, 481, 737, 793, 815, 1067
BstNI CCWGG 3 cut(s) 299, 844, 1095
BstNSI RCATGY 2 cut(s) 28, 398
BstSCI CCNGG 6 cut(s) 83, 297, 767, 768, 842, 1093
BstSFI CTRYAG 3 cut(s) 372, 444, 591
BstV1I GCAGC 2 cut(s) 430, 748
BstV2I GAAGAC 1 cut(s) 27
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
BsuRI GGCC 3 cut(s) 384, 740, 787
BtgZI GCGATG 1 cut(s) 156
BtsCI GGATG 7 cut(s) 125, 274, 559, 694, 942, 975, 1165
Cac8I GCNNGC 4 cut(s) 51, 158, 789, 1192
CfoI GCGC 2 cut(s) 40, 265
Cfr13I GGNCC 4 cut(s) 383, 738, 890, 1097
Cfr9I CCCGGG 1 cut(s) 768
Csp6I GTAC 1 cut(s) 1075
CviAII CATG 8 cut(s) 25, 65, 395, 860, 979, 1051, 1071, 1155
CviQI GTAC 1 cut(s) 1075
DdeI CTNAG 2 cut(s) 172, 945
DpnI GATC 5 cut(s) 62, 99, 402, 624, 726
DpnII GATC 5 cut(s) 60, 97, 400, 622, 724
DrdI GACNNNNNNGTC 1 cut(s) 897
DseDI GACNNNNNNGTC 1 cut(s) 897
Eam1104I CTCTTC 4 cut(s) 36, 47, 481, 1110
EarI CTCTTC 4 cut(s) 36, 47, 481, 1110
Eco130I CCWWGG 1 cut(s) 186
Eco24I GRGCYC 1 cut(s) 412
Eco31I GGTCTC 1 cut(s) 176
Eco32I GATATC 1 cut(s) 196
Eco47I GGWCC 2 cut(s) 890, 1097
Eco57I CTGAAG 2 cut(s) 434, 1022
Eco88I CYCGRG 2 cut(s) 768, 1182
EcoRII CCWGG 3 cut(s) 297, 842, 1093
EcoRV GATATC 1 cut(s) 196
EcoT14I CCWWGG 1 cut(s) 186
EcoT22I ATGCAT 1 cut(s) 861
EcoT38I GRGCYC 1 cut(s) 412
ErhI CCWWGG 1 cut(s) 186
FaeI CATG 8 cut(s) 28, 68, 398, 863, 982, 1054, 1074, 1158
FalI AAGNNNNNCTT 4 cut(s) 642, 674, 702, 734
FatI CATG 8 cut(s) 24, 64, 394, 859, 978, 1050, 1070, 1154
FauI CCCGC 2 cut(s) 567, 686
Fnu4HI GCNGC 5 cut(s) 72, 444, 762, 942, 1134
FokI GGATG 7 cut(s) 132, 281, 566, 701, 949, 982, 1172
FriOI GRGCYC 1 cut(s) 412
Fsp4HI GCNGC 5 cut(s) 72, 444, 762, 942, 1134
FspBI CTAG 1 cut(s) 830
FspI TGCGCA 1 cut(s) 264
GlaI GCGC 2 cut(s) 39, 264
GluI GCNGC 5 cut(s) 72, 444, 762, 942, 1134
GsaI CCCAGC 1 cut(s) 164
HaeII RGCGCY 1 cut(s) 41
HaeIII GGCC 3 cut(s) 384, 740, 787
HapII CCGG 4 cut(s) 35, 84, 769, 1106
HhaI GCGC 2 cut(s) 40, 265
Hin1II CATG 8 cut(s) 28, 68, 398, 863, 982, 1054, 1074, 1158
Hin6I GCGC 2 cut(s) 38, 263
HinP1I GCGC 2 cut(s) 38, 263
HincII GTYRAC 1 cut(s) 519
HindII GTYRAC 1 cut(s) 519
HinfI GANTC 5 cut(s) 80, 283, 426, 449, 898
HpaII CCGG 4 cut(s) 35, 84, 769, 1106
HphI GGTGA 3 cut(s) 121, 254, 793
Hpy166II GTNNAC 2 cut(s) 519, 588
Hpy188I TCNGA 4 cut(s) 57, 351, 414, 853
Hpy188III TCNNGA 7 cut(s) 101, 710, 719, 755, 821, 830, 1139
Hpy8I GTNNAC 2 cut(s) 519, 588
Hpy99I CGWCG 1 cut(s) 79
HpyAV CCTTC 5 cut(s) 109, 399, 691, 827, 997
HpyCH4III ACNGT 1 cut(s) 595
HpyCH4IV ACGT 1 cut(s) 1025
HpyCH4V TGCA 8 cut(s) 123, 374, 446, 764, 775, 809, 859, 1070
HpyF10VI GCNNNNNNNGC 7 cut(s) 46, 299, 481, 737, 793, 815, 1067
HpyF3I CTNAG 2 cut(s) 172, 945
HpySE526I ACGT 1 cut(s) 1025
Hsp92II CATG 8 cut(s) 28, 68, 398, 863, 982, 1054, 1074, 1158
HspAI GCGC 2 cut(s) 38, 263
Kzo9I GATC 5 cut(s) 60, 97, 400, 622, 724
LguI GCTCTTC 1 cut(s) 47
LmnI GCTCC 2 cut(s) 472, 571
Lsp1109I GCAGC 2 cut(s) 430, 748
LweI GCATC 9 cut(s) 110, 377, 515, 624, 748, 760, 846, 960, 1120
MaeI CTAG 1 cut(s) 830
MaeII ACGT 1 cut(s) 1025
MalI GATC 5 cut(s) 62, 99, 402, 624, 726
MbiI CCGCTC 3 cut(s) 475, 574, 1136
MboI GATC 5 cut(s) 60, 97, 400, 622, 724
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 1 cut(s) 412
MluCI AATT 9 cut(s) 8, 245, 305, 324, 388, 455, 465, 701, 1063
MlyI GAGTC 2 cut(s) 89, 907
MmeI TCCRAC 2 cut(s) 111, 609
Mph1103I ATGCAT 1 cut(s) 861
MroXI GAANNNNTTC 1 cut(s) 345
MseI TTAA 5 cut(s) 248, 288, 308, 468, 669
MslI CAYNNNNRTG 1 cut(s) 756
MspCI CTTAAG 1 cut(s) 287
MspI CCGG 4 cut(s) 35, 84, 769, 1106
MspR9I CCNGG 6 cut(s) 85, 299, 769, 770, 844, 1095
MvaI CCWGG 3 cut(s) 299, 844, 1095
MwoI GCNNNNNNNGC 7 cut(s) 46, 299, 481, 737, 793, 815, 1067
NciI CCSGG 3 cut(s) 85, 769, 770
NdeII GATC 5 cut(s) 60, 97, 400, 622, 724
NlaIII CATG 8 cut(s) 28, 68, 398, 863, 982, 1054, 1074, 1158
NlaIV GGNNCC 2 cut(s) 228, 1083
NmeAIII GCCGAG 1 cut(s) 766
NsbI TGCGCA 1 cut(s) 264
NsiI ATGCAT 1 cut(s) 861
NspI RCATGY 2 cut(s) 28, 398
PciI ACATGT 1 cut(s) 394
PciSI GCTCTTC 1 cut(s) 47
PdmI GAANNNNTTC 1 cut(s) 345
PfeI GAWTC 3 cut(s) 283, 426, 449
PflFI GACNNNGTC 1 cut(s) 79
PkrI GCNGC 5 cut(s) 73, 445, 763, 943, 1135
Ple19I CGATCG 1 cut(s) 727
PleI GAGTC 2 cut(s) 88, 906
PpsI GAGTC 2 cut(s) 88, 906
Ppu21I YACGTR 1 cut(s) 1026
PscI ACATGT 1 cut(s) 394
Psp6I CCWGG 3 cut(s) 297, 842, 1093
PspFI CCCAGC 1 cut(s) 160
PspGI CCWGG 3 cut(s) 297, 842, 1093
PspN4I GGNNCC 2 cut(s) 228, 1083
PspPI GGNCC 4 cut(s) 383, 738, 890, 1097
PstI CTGCAG 2 cut(s) 376, 448
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 1 cut(s) 79
PvuI CGATCG 1 cut(s) 727
RsaI GTAC 1 cut(s) 1076
RsaNI GTAC 1 cut(s) 1075
RseI CAYNNNNRTG 1 cut(s) 756
SapI GCTCTTC 1 cut(s) 47
SaqAI TTAA 5 cut(s) 248, 288, 308, 468, 669
SatI GCNGC 5 cut(s) 72, 444, 762, 942, 1134
Sau3AI GATC 5 cut(s) 60, 97, 400, 622, 724
Sau96I GGNCC 4 cut(s) 383, 738, 890, 1097
SchI GAGTC 2 cut(s) 89, 907
ScrFI CCNGG 6 cut(s) 85, 299, 769, 770, 844, 1095
SduI GDGCHC 1 cut(s) 412
SfaNI GCATC 9 cut(s) 110, 377, 515, 624, 748, 760, 846, 960, 1120
SfcI CTRYAG 3 cut(s) 372, 444, 591
SinI GGWCC 2 cut(s) 890, 1097
SmaI CCCGGG 1 cut(s) 770
SmiMI CAYNNNNRTG 1 cut(s) 756
SmlI CTYRAG 3 cut(s) 287, 819, 1137
SmoI CTYRAG 3 cut(s) 287, 819, 1137
Sse9I AATT 9 cut(s) 8, 245, 305, 324, 388, 455, 465, 701, 1063
SsiI CCGC 7 cut(s) 71, 475, 574, 693, 941, 1103, 1134
SspI AATATT 1 cut(s) 885
SspMI CTAG 1 cut(s) 830
StyD4I CCNGG 6 cut(s) 83, 297, 767, 768, 842, 1093
StyI CCWWGG 1 cut(s) 186
TaaI ACNGT 1 cut(s) 595
TaiI ACGT 1 cut(s) 1028
TaqI TCGA 3 cut(s) 45, 96, 403
TasI AATT 9 cut(s) 8, 245, 305, 324, 388, 455, 465, 701, 1063
TauI GCSGC 3 cut(s) 74, 944, 1136
TfiI GAWTC 3 cut(s) 283, 426, 449
Tru1I TTAA 5 cut(s) 248, 288, 308, 468, 669
Tru9I TTAA 5 cut(s) 248, 288, 308, 468, 669
TseI GCWGC 2 cut(s) 443, 761
TspDTI ATGAA 4 cut(s) 159, 876, 1034, 1103
TspGWI ACGGA 2 cut(s) 92, 576
TspMI CCCGGG 1 cut(s) 768
Tth111I GACNNNGTC 1 cut(s) 79
Vha464I CTTAAG 1 cut(s) 287
VpaK11BI GGWCC 2 cut(s) 890, 1097
XapI RAATTY 2 cut(s) 388, 701
XbaI TCTAGA 1 cut(s) 829
XceI RCATGY 2 cut(s) 28, 398
XmaI CCCGGG 1 cut(s) 768
XmnI GAANNNNTTC 1 cut(s) 345
XspI CTAG 1 cut(s) 830
Zsp2I ATGCAT 1 cut(s) 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.