pycom01g22790

PP2A regulatory subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
20275226 .. 20277700
2475 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g22790.2

Sequence Viewer

Length: 1221 bp
ATGGGAGAGTTGAACATGGAGGACATGCCTCTGCCGGCACTTTTCGAGCAAGCTCGGAAGATCCACCTGGGGGCGACGGATTCCGGGGACGGTGTTGATCAGGAGGAGATTAGGAAGGGGTGCAGAGCTTTGGAGAAGTGCGATGAAATGATAAGCAATCTGGGTTTGTTCTCGGCCAATGAGACCAAGGAGGATATCAGCACCACCAATCTCAAATATCTTCTGGTGCCGTATTACCTCGGGGAGTTAATCGAAAAGGTTGCGCAGGATGACAGGATATCGATTCTTAAGGCTTCCCAGGCTAAGTTAAAGGAGTTTATTTCAATTTGCGAGACAATGGAACTTGTTCCAAAAGAGGAGTTAGAAGCATCTGCAAAAGATGGCCCAAATTCACATGTTGATCGAAGGGCTCTAAAGATTGCTCGATTTAAAAGGCAGAGAGCTGCAGAATCAAAATTGCTGGAAATTAAGGAGCGGAAAGAGCGAAGAGGGCGTTCAACTAAAGCATCTGCCTTGTCAACTCCTATTGAGGCAGGAGAGGCAGATGTGCTGGATGATGACGGAGAGGAGGAGCGGGAGGCTTGGTTTACTACAATCTCTTTGGCAGTTAGTAAGGCTTTTGATCTGTTGGAGATGCTAAAGAAAGAGGAAGAAATGCTTGTAGCTTTTAAGGAAAGGCAATCAAAGGATGGTGGCAAGGAATTTTATCAAGATGTTCTTGATGATCGTGCCAAGAGGGCCGAAGCTTGGCATCGTGATGCTGCAACCCGAGTGCAGTATAGTAGACCGGCAGAGCCTATCACCTGTGCAACTTTTGCTCAAGACGTTCTAGAAGGCAGAGCCAGGGTTTCAGAGATGCATGAACACAAACATCAGCCACTAATATTTGGACCAGCAAGTCTTATAGGTGGAAACCCAACAAGTGAGAGGGAAAGGATGGCGGCTCAGGTTTTCCAGCCCAGTCATAGGTTGCCGACCATGAGCATAGAGGAAGCCGGATTGAAGGAGATGGAGATAATGAATACGTGGCAAGAGAGGAACGCGAAACTCATGGAAGAAGCCAATTCTGCATGGTACAAGGAACCTATGAAACCAGGACCACCACCGGAGGGGGAAGATGAAGACGATGATGCCGCTCAAGACAGGGCGAGGGCTTGGGATGACTGGAAAGATGATAATCCTCGGGGTGCTGGCAACAAGAAGCTCACCCCTTGTGGATAA

Protein Analysis

407

Amino Acids

45.87

Weight (kDa)

5.02

Isoelectric Point (pI)

43.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 897
Acc16I TGCGCA 1 cut(s) 264
AccB1I GGYRCC 1 cut(s) 226
AccBSI CCGCTC 3 cut(s) 475, 574, 1136
AccI GTMKAC 1 cut(s) 784
AccII CGCG 1 cut(s) 1043
AciI CCGC 4 cut(s) 475, 574, 941, 1134
AclWI GGATC 1 cut(s) 55
AcoI YGGCCR 1 cut(s) 174
AcsI RAATTY 2 cut(s) 388, 701
AfaI GTAC 1 cut(s) 1076
AfiI CCNNNNNNNGG 4 cut(s) 70, 747, 966, 1109
AflII CTTAAG 1 cut(s) 287
AflIII ACRYGT 1 cut(s) 394
AgsI TTSAA 4 cut(s) 13, 324, 498, 1003
AjnI CCWGG 4 cut(s) 66, 297, 842, 1093
AluBI AGCT 6 cut(s) 53, 128, 443, 665, 746, 1204
AluI AGCT 6 cut(s) 53, 128, 443, 665, 746, 1204
Alw26I GTCTC 2 cut(s) 176, 326
AlwI GGATC 1 cut(s) 55
Ama87I CYCGRG 3 cut(s) 239, 768, 1182
AoxI GGCC 3 cut(s) 174, 382, 738
ApeKI GCWGC 2 cut(s) 443, 761
ApoI RAATTY 2 cut(s) 388, 701
Asp700I GAANNNNTTC 1 cut(s) 345
AspLEI GCGC 1 cut(s) 265
AspS9I GGNCC 4 cut(s) 383, 738, 890, 1097
AsuC2I CCSGG 1 cut(s) 85
AsuHPI GGTGA 2 cut(s) 793, 1198
AvaI CYCGRG 3 cut(s) 239, 768, 1182
AvaII GGWCC 2 cut(s) 890, 1097
BanI GGYRCC 1 cut(s) 226
BanII GRGCYC 1 cut(s) 412
BbsI GAAGAC 1 cut(s) 1128
BbvI GCAGC 2 cut(s) 430, 748
BccI CCATC 4 cut(s) 374, 683, 931, 1003
BceAI ACGGC 1 cut(s) 214
BcgI CGANNNNNNTGC 2 cut(s) 242, 276
BciT130I CCWGG 4 cut(s) 68, 299, 844, 1095
BclI TGATCA 1 cut(s) 97
BcnI CCSGG 1 cut(s) 85
BcoDI GTCTC 2 cut(s) 176, 326
BfaI CTAG 1 cut(s) 830
BfmI CTRYAG 1 cut(s) 444
BfrI CTTAAG 1 cut(s) 287
BglI GCCNNNNNGGC 1 cut(s) 737
BisI GCNGC 4 cut(s) 444, 762, 942, 1134
BlsI GCNGC 4 cut(s) 445, 763, 943, 1135
Bme1390I CCNGG 5 cut(s) 68, 85, 299, 844, 1095
Bme18I GGWCC 2 cut(s) 890, 1097
BmeT110I CYCGRG 3 cut(s) 239, 768, 1182
BmgT120I GGNCC 4 cut(s) 383, 738, 890, 1097
BmiI GGNNCC 2 cut(s) 228, 1083
BmrFI CCNGG 5 cut(s) 68, 85, 299, 844, 1095
BmrI ACTGGG 1 cut(s) 954
BmsI GCATC 7 cut(s) 377, 515, 624, 748, 760, 846, 1120
BmuI ACTGGG 1 cut(s) 954
BpiI GAAGAC 1 cut(s) 1128
Bpu10I CCTNAGC 1 cut(s) 945
BpuEI CTTGAG 2 cut(s) 804, 1122
BpuMI CCSGG 1 cut(s) 85
Bsa29I ATCGAT 1 cut(s) 281
BsaAI YACGTR 1 cut(s) 1026
BsaBI GATNNNNATC 1 cut(s) 1176
BsaI GGTCTC 1 cut(s) 176
BsaJI CCNNGG 7 cut(s) 67, 84, 186, 238, 297, 843, 1181
BsaWI WCCGGW 1 cut(s) 1105
BsaXI ACNNNNNCTCC 2 cut(s) 569, 599
Bsc4I CCNNNNNNNGG 4 cut(s) 70, 747, 966, 1109
Bse118I RCCGGY 2 cut(s) 34, 787
Bse1I ACTGG 2 cut(s) 960, 1169
Bse8I GATNNNNATC 1 cut(s) 1176
BseBI CCWGG 4 cut(s) 68, 299, 844, 1095
BseCI ATCGAT 1 cut(s) 281
BseDI CCNNGG 7 cut(s) 67, 84, 186, 238, 297, 843, 1181
BseGI GGATG 5 cut(s) 274, 559, 694, 942, 1165
BseJI GATNNNNATC 1 cut(s) 1176
BseLI CCNNNNNNNGG 4 cut(s) 70, 747, 966, 1109
BseMII CTCAG 1 cut(s) 959
BseNI ACTGG 2 cut(s) 960, 1169
BseRI GAGGAG 4 cut(s) 119, 371, 581, 584
BseXI GCAGC 2 cut(s) 430, 748
BsgI GTGCAG 2 cut(s) 142, 794
Bsh1236I CGCG 1 cut(s) 1043
BshFI GGCC 3 cut(s) 176, 384, 740
BshNI GGYRCC 1 cut(s) 226
BshVI ATCGAT 1 cut(s) 281
BsiHKCI CYCGRG 3 cut(s) 239, 768, 1182
BsiSI CCGG 5 cut(s) 35, 84, 788, 996, 1106
BslFI GGGAC 1 cut(s) 101
BslI CCNNNNNNNGG 4 cut(s) 70, 747, 966, 1109
BsmAI GTCTC 2 cut(s) 176, 326
BsmFI GGGAC 1 cut(s) 101
BsnI GGCC 3 cut(s) 176, 384, 740
Bso31I GGTCTC 1 cut(s) 176
BsoBI CYCGRG 3 cut(s) 239, 768, 1182
Bsp1286I GDGCHC 1 cut(s) 412
Bsp143I GATC 5 cut(s) 60, 97, 400, 622, 724
BspACI CCGC 4 cut(s) 475, 574, 941, 1134
BspANI GGCC 3 cut(s) 176, 384, 740
BspCNI CTCAG 1 cut(s) 958
BspDI ATCGAT 1 cut(s) 281
BspFNI CGCG 1 cut(s) 1043
BspLI GGNNCC 2 cut(s) 228, 1083
BspMAI CTGCAG 1 cut(s) 448
BspPI GGATC 1 cut(s) 55
BspT107I GGYRCC 1 cut(s) 226
BspTI CTTAAG 1 cut(s) 287
BspTNI GGTCTC 1 cut(s) 176
BsrBI CCGCTC 3 cut(s) 475, 574, 1136
BsrFI RCCGGY 2 cut(s) 34, 787
BsrI ACTGG 2 cut(s) 960, 1169
BssAI RCCGGY 2 cut(s) 34, 787
BssECI CCNNGG 7 cut(s) 67, 84, 186, 238, 297, 843, 1181
BssMI GATC 5 cut(s) 60, 97, 400, 622, 724
BssT1I CCWWGG 1 cut(s) 186
Bst2UI CCWGG 4 cut(s) 68, 299, 844, 1095
Bst4CI ACNGT 1 cut(s) 92
Bst6I CTCTTC 1 cut(s) 481
BstAFI CTTAAG 1 cut(s) 287
BstAPI GCANNNNNTGC 1 cut(s) 815
BstBAI YACGTR 1 cut(s) 1026
BstC8I GCNNGC 3 cut(s) 36, 51, 1192
BstDEI CTNAG 2 cut(s) 303, 945
BstF5I GGATG 5 cut(s) 274, 559, 694, 942, 1165
BstFNI CGCG 1 cut(s) 1043
BstHHI GCGC 1 cut(s) 265
BstKTI GATC 5 cut(s) 63, 100, 403, 625, 727
BstMAI GTCTC 2 cut(s) 176, 326
BstMBI GATC 5 cut(s) 60, 97, 400, 622, 724
BstMWI GCNNNNNNNGC 7 cut(s) 299, 481, 490, 539, 737, 815, 1067
BstNI CCWGG 4 cut(s) 68, 299, 844, 1095
BstNSI RCATGY 2 cut(s) 28, 398
BstSCI CCNGG 5 cut(s) 66, 83, 297, 842, 1093
BstSFI CTRYAG 1 cut(s) 444
BstUI CGCG 1 cut(s) 1043
BstV1I GCAGC 2 cut(s) 430, 748
BstV2I GAAGAC 1 cut(s) 1128
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
Bsu15I ATCGAT 1 cut(s) 281
BsuRI GGCC 3 cut(s) 176, 384, 740
BsuTUI ATCGAT 1 cut(s) 281
BtgZI GCGATG 1 cut(s) 156
BtsCI GGATG 5 cut(s) 274, 559, 694, 942, 1165
Cac8I GCNNGC 3 cut(s) 36, 51, 1192
CfoI GCGC 1 cut(s) 265
Cfr10I RCCGGY 2 cut(s) 34, 787
Cfr13I GGNCC 4 cut(s) 383, 738, 890, 1097
ClaI ATCGAT 1 cut(s) 281
Csp6I GTAC 1 cut(s) 1075
CviAII CATG 7 cut(s) 16, 25, 395, 860, 979, 1051, 1071
CviQI GTAC 1 cut(s) 1075
DdeI CTNAG 2 cut(s) 303, 945
DpnI GATC 5 cut(s) 62, 99, 402, 624, 726
DpnII GATC 5 cut(s) 60, 97, 400, 622, 724
DraI TTTAAA 1 cut(s) 430
DrdI GACNNNNNNGTC 1 cut(s) 897
DseDI GACNNNNNNGTC 1 cut(s) 897
EaeI YGGCCR 1 cut(s) 174
Eam1104I CTCTTC 1 cut(s) 481
EarI CTCTTC 1 cut(s) 481
Eco130I CCWWGG 1 cut(s) 186
Eco24I GRGCYC 1 cut(s) 412
Eco31I GGTCTC 1 cut(s) 176
Eco32I GATATC 2 cut(s) 196, 279
Eco47I GGWCC 2 cut(s) 890, 1097
Eco88I CYCGRG 3 cut(s) 239, 768, 1182
EcoRII CCWGG 4 cut(s) 66, 297, 842, 1093
EcoRV GATATC 2 cut(s) 196, 279
EcoT14I CCWWGG 1 cut(s) 186
EcoT22I ATGCAT 1 cut(s) 861
EcoT38I GRGCYC 1 cut(s) 412
ErhI CCWWGG 1 cut(s) 186
FaeI CATG 7 cut(s) 19, 28, 398, 863, 982, 1054, 1074
FalI AAGNNNNNCTT 4 cut(s) 642, 674, 702, 734
FaqI GGGAC 1 cut(s) 101
FatI CATG 7 cut(s) 15, 24, 394, 859, 978, 1050, 1070
FauI CCCGC 1 cut(s) 567
FbaI TGATCA 1 cut(s) 97
FblI GTMKAC 1 cut(s) 784
Fnu4HI GCNGC 4 cut(s) 444, 762, 942, 1134
FokI GGATG 5 cut(s) 281, 566, 701, 949, 1172
FriOI GRGCYC 1 cut(s) 412
Fsp4HI GCNGC 4 cut(s) 444, 762, 942, 1134
FspBI CTAG 1 cut(s) 830
FspI TGCGCA 1 cut(s) 264
GlaI GCGC 1 cut(s) 264
GluI GCNGC 4 cut(s) 444, 762, 942, 1134
HaeIII GGCC 3 cut(s) 176, 384, 740
HapII CCGG 5 cut(s) 35, 84, 788, 996, 1106
HhaI GCGC 1 cut(s) 265
Hin1II CATG 7 cut(s) 19, 28, 398, 863, 982, 1054, 1074
Hin6I GCGC 1 cut(s) 263
HinP1I GCGC 1 cut(s) 263
HincII GTYRAC 1 cut(s) 519
HindII GTYRAC 1 cut(s) 519
HindIII AAGCTT 1 cut(s) 744
HinfI GANTC 3 cut(s) 80, 283, 449
HpaII CCGG 5 cut(s) 35, 84, 788, 996, 1106
HphI GGTGA 2 cut(s) 793, 1198
Hpy166II GTNNAC 3 cut(s) 519, 588, 785
Hpy188I TCNGA 2 cut(s) 57, 853
Hpy188III TCNNGA 7 cut(s) 101, 710, 719, 755, 821, 830, 1139
Hpy8I GTNNAC 3 cut(s) 519, 588, 785
Hpy99I CGWCG 1 cut(s) 79
HpyAV CCTTC 4 cut(s) 109, 399, 827, 997
HpyCH4III ACNGT 1 cut(s) 92
HpyCH4IV ACGT 2 cut(s) 825, 1025
HpyCH4V TGCA 8 cut(s) 123, 374, 446, 764, 775, 809, 859, 1070
HpyF10VI GCNNNNNNNGC 7 cut(s) 299, 481, 490, 539, 737, 815, 1067
HpyF3I CTNAG 2 cut(s) 303, 945
HpySE526I ACGT 2 cut(s) 825, 1025
Hsp92II CATG 7 cut(s) 19, 28, 398, 863, 982, 1054, 1074
HspAI GCGC 1 cut(s) 263
KroI GCCGGC 1 cut(s) 34
KroNI GCCGGC 1 cut(s) 36
Ksp22I TGATCA 1 cut(s) 97
Kzo9I GATC 5 cut(s) 60, 97, 400, 622, 724
LmnI GCTCC 2 cut(s) 472, 571
Lsp1109I GCAGC 2 cut(s) 430, 748
LweI GCATC 7 cut(s) 377, 515, 624, 748, 760, 846, 1120
MaeI CTAG 1 cut(s) 830
MaeII ACGT 2 cut(s) 825, 1025
MalI GATC 5 cut(s) 62, 99, 402, 624, 726
MbiI CCGCTC 3 cut(s) 475, 574, 1136
MboI GATC 5 cut(s) 60, 97, 400, 622, 724
MboII GAAGA 7 cut(s) 70, 212, 498, 662, 1067, 1127, 1133
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 1 cut(s) 412
MluCI AATT 6 cut(s) 324, 388, 455, 465, 701, 1063
MmeI TCCRAC 1 cut(s) 609
Mph1103I ATGCAT 1 cut(s) 861
MroNI GCCGGC 1 cut(s) 34
MroXI GAANNNNTTC 1 cut(s) 345
MseI TTAA 6 cut(s) 248, 288, 308, 429, 468, 669
MslI CAYNNNNRTG 1 cut(s) 756
MspCI CTTAAG 1 cut(s) 287
MspI CCGG 5 cut(s) 35, 84, 788, 996, 1106
MspR9I CCNGG 5 cut(s) 68, 85, 299, 844, 1095
MvaI CCWGG 4 cut(s) 68, 299, 844, 1095
MvnI CGCG 1 cut(s) 1043
MwoI GCNNNNNNNGC 7 cut(s) 299, 481, 490, 539, 737, 815, 1067
NaeI GCCGGC 1 cut(s) 36
NciI CCSGG 1 cut(s) 85
NdeII GATC 5 cut(s) 60, 97, 400, 622, 724
NgoMIV GCCGGC 1 cut(s) 34
NlaIII CATG 7 cut(s) 19, 28, 398, 863, 982, 1054, 1074
NlaIV GGNNCC 2 cut(s) 228, 1083
NmeAIII GCCGAG 1 cut(s) 152
NsbI TGCGCA 1 cut(s) 264
NsiI ATGCAT 1 cut(s) 861
NspI RCATGY 2 cut(s) 28, 398
PciI ACATGT 1 cut(s) 394
PdiI GCCGGC 1 cut(s) 36
PdmI GAANNNNTTC 1 cut(s) 345
PfeI GAWTC 3 cut(s) 80, 283, 449
PkrI GCNGC 4 cut(s) 445, 763, 943, 1135
Ppu21I YACGTR 1 cut(s) 1026
PscI ACATGT 1 cut(s) 394
Psp6I CCWGG 4 cut(s) 66, 297, 842, 1093
PspGI CCWGG 4 cut(s) 66, 297, 842, 1093
PspN4I GGNNCC 2 cut(s) 228, 1083
PspPI GGNCC 4 cut(s) 383, 738, 890, 1097
PstI CTGCAG 1 cut(s) 448
PsuI RGATCY 1 cut(s) 60
RsaI GTAC 1 cut(s) 1076
RsaNI GTAC 1 cut(s) 1075
RseI CAYNNNNRTG 1 cut(s) 756
SaqAI TTAA 6 cut(s) 248, 288, 308, 429, 468, 669
SatI GCNGC 4 cut(s) 444, 762, 942, 1134
Sau3AI GATC 5 cut(s) 60, 97, 400, 622, 724
Sau96I GGNCC 4 cut(s) 383, 738, 890, 1097
ScrFI CCNGG 5 cut(s) 68, 85, 299, 844, 1095
SduI GDGCHC 1 cut(s) 412
SfaNI GCATC 7 cut(s) 377, 515, 624, 748, 760, 846, 1120
SfcI CTRYAG 1 cut(s) 444
SinI GGWCC 2 cut(s) 890, 1097
SmiMI CAYNNNNRTG 1 cut(s) 756
SmlI CTYRAG 3 cut(s) 287, 819, 1137
SmoI CTYRAG 3 cut(s) 287, 819, 1137
Sse9I AATT 6 cut(s) 324, 388, 455, 465, 701, 1063
SsiI CCGC 4 cut(s) 475, 574, 941, 1134
SspI AATATT 1 cut(s) 885
SspMI CTAG 1 cut(s) 830
StyD4I CCNGG 5 cut(s) 66, 83, 297, 842, 1093
StyI CCWWGG 1 cut(s) 186
TaaI ACNGT 1 cut(s) 92
TaiI ACGT 2 cut(s) 828, 1028
TaqI TCGA 5 cut(s) 45, 252, 281, 403, 424
TasI AATT 6 cut(s) 324, 388, 455, 465, 701, 1063
TauI GCSGC 2 cut(s) 944, 1136
TfiI GAWTC 3 cut(s) 80, 283, 449
Tru1I TTAA 6 cut(s) 248, 288, 308, 429, 468, 669
Tru9I TTAA 6 cut(s) 248, 288, 308, 429, 468, 669
TseI GCWGC 2 cut(s) 443, 761
TspDTI ATGAA 5 cut(s) 159, 876, 1034, 1103, 1134
TspGWI ACGGA 2 cut(s) 92, 576
Vha464I CTTAAG 1 cut(s) 287
VpaK11BI GGWCC 2 cut(s) 890, 1097
XapI RAATTY 2 cut(s) 388, 701
XbaI TCTAGA 1 cut(s) 829
XceI RCATGY 2 cut(s) 28, 398
XmiI GTMKAC 1 cut(s) 784
XmnI GAANNNNTTC 1 cut(s) 345
XspI CTAG 1 cut(s) 830
Zsp2I ATGCAT 1 cut(s) 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.