Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0013722

Physical Location & Seq

Genomic Coordinates Forward (+)

29484497 .. 29486645

Gene Structure 2149 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G312300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1182 bp

ATGTTAGAGTCGGGCGGCGAGATGAGACGACAGAGCTTCGTCATCGAAACCAAGAACGGCAGCAGAAAGCGACTCAAAGTACGGCGACTGAAGTACACGTGTCAAACGAAGGTCGAGGTGGAGATCACCGGCGGCCACAAGGAATACGGCTCTTCGGAGTTGAAGAGAGAACAGAAAGATGTTGGTGTTCCGGTTAAGGTTTTGTCTGTGTCATTTTCGTCTACAGAAAACGACATCGTCTTGTCGAGTAGTTCCGGTTCCGGATCAGACGAGAGACGGAAAACGAGTGGTGGTGAGAGTTTGGAAAGGTTGGGAAGGGGTACGTACGGCGTCGTTTCGGTGCAGGGGAGGAGGAAGGTGATGGAAGATGCAGTAAGAGCGGAGGTAGGGTTTGCGGTGAACGGATCACGTGGGAAGTTTGACTTCTTTGGGGTGTATGACGGGCACGGTGGGGCTGACGTGGCGAGGGCTTGCAGAGATAGGATGCATGAGGTGGTGGCGGAGGCAGTGGAACTGGAACGGATTAATAACAGTAGTAATAATAATAATAAGAAAGATCCGGTGGATTGGGATTGGGAGAGGGTGATGGAGGGGTGTTTTGGTAAAATGGATGAGGAGGTGAGCGGGATTGCGGCGGCCAGGACGGTTGGGGCTACGGCGGTGGTGGCGGTGGTGACGGAGGATCAGGTGGTGGTGGGGAATTGCGGTGATTGTAGGGCTGTTTTGTCGAGAGGTGGTGTTGCCTTGGCCTTGTCTAGTGACCATAAGCCTGACAGAGTGGATGAGTTGAAGAGAATTGAAGCTGCGGGTGGAAAAGTCATCAATTGGAATGGAAACCGTGTTCTCGGGGTGCTTGCCACTTCCAGATCCATTGGTGACAAATACATGAGACCATATGTGATATCAAAACCAGAGGTGACGGTGACAAAACGAACTGAGGAGGATGAATTCCTCATCCTTGCCAGTGATGGGCTGTGGGATGTTATATCGAACGAGGTGGCGTGTAGGGTTGTGAACAAGTGCCTTGATGGAAAAATAAGGAGAATTTCCATACATGGGGAGGATCATGTCCAAAGTCACACTACGTCTGAGGCAGCAGCTGTCTTGGCTGATCTAGCTATGGCTCGGGGAAGCAAAGATAACATCAGTGTGATTGTTGTCGCCCTATCAAAAACGAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009787 GO:0009788 GO:0009966 GO:0009968 GO:0009987 GO:0010029 GO:0010030 GO:0010646 GO:0010648 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0023051 GO:0023057 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051239 GO:0051240 GO:0065007 GO:0071704 GO:0140096 GO:1900140 GO:1901419 GO:1901420 GO:1901564 GO:1905957 GO:1905958 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 ko04931 map04016 map04075 map04931

Pfam Domains

Protein Families

PP2C

Protein Analysis

394

Amino Acids

42.68

Weight (kDa)

7.6

Isoelectric Point (pI)

42.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013722)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g31810
malus_domestica	MD01G1220800.v1.1 MD07G1291000.v1.1
prunus_persica	Prupe.2G312300_v2.0.a1
pyrus_communis	pycom01g23030 pycom07g26360
rosa_chinensis	RchiOBHm_Chr1g0381041
rosa_laevigata	RLG00000026250
rosa_multiflora	Rmu_co8392071.1_g000001
rosa_roxburghii	Rroxscaffold_4G00278830
rosa_rugosa	Rorug01G0426700 Rorug01G0426800 Rorug01G0426900
rosa_samantha	Rh1AG450500 Rh1BG406800 Rh1CG420600 Rh1DG437300
rosa_wichuraiana	Rw1G039260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	2 cut(s)	380, 624
AccI	GTMKAC	1 cut(s)	221
AccIII	TCCGGA	1 cut(s)	260
AclWI	GGATC	6 cut(s)	271, 412, 551, 690, 861, 1071
AcoI	YGGCCR	2 cut(s)	133, 636
AcsI	RAATTY	2 cut(s)	947, 1044
AcuI	CTGAAG	1 cut(s)	110
AcvI	CACGTG	2 cut(s)	99, 410
AcyI	GRCGYC	1 cut(s)	330
AfaI	GTAC	4 cut(s)	81, 95, 322, 326
AfiI	CCNNNNNNNGG	2 cut(s)	969, 1056
AflIII	ACRYGT	2 cut(s)	96, 98
AgsI	TTSAA	3 cut(s)	163, 790, 800
AjiI	CACGTC	1 cut(s)	460
AjnI	CCWGG	1 cut(s)	638
AloI	GAACNNNNNNTCC	2 cut(s)	825, 857
AluBI	AGCT	5 cut(s)	36, 803, 1100, 1118, 1179
AluI	AGCT	5 cut(s)	36, 803, 1100, 1118, 1179
Alw26I	GTCTC	3 cut(s)	19, 268, 883
AlwI	GGATC	6 cut(s)	271, 412, 551, 690, 861, 1071
AlwNI	CAGNNNCTG	1 cut(s)	1100
Ama87I	CYCGRG	2 cut(s)	845, 1125
Aor13HI	TCCGGA	1 cut(s)	260
AoxI	GGCC	3 cut(s)	133, 636, 747
ApeKI	GCWGC	4 cut(s)	60, 803, 1094, 1097
ApoI	RAATTY	2 cut(s)	947, 1044
AseI	ATTAAT	1 cut(s)	525
AvaI	CYCGRG	2 cut(s)	845, 1125
BaeGI	GKGCMC	1 cut(s)	447
BbrPI	CACGTG	2 cut(s)	99, 410
BbvI	GCAGC	4 cut(s)	72, 790, 1106, 1109
BccI	CCATC	4 cut(s)	355, 580, 962, 1022
BceAI	ACGGC	5 cut(s)	73, 98, 163, 343, 672
BciT130I	CCWGG	1 cut(s)	640
BcoDI	GTCTC	3 cut(s)	19, 268, 883
BfaI	CTAG	3 cut(s)	756, 1115, 1180
BfmI	CTRYAG	1 cut(s)	222
BisI	GCNGC	8 cut(s)	16, 61, 133, 633, 636, 804, 1095, 1098
BlsI	GCNGC	8 cut(s)	17, 62, 134, 634, 637, 805, 1096, 1099
Bme1390I	CCNGG	1 cut(s)	640
BmeT110I	CYCGRG	2 cut(s)	845, 1125
BmgBI	CACGTC	1 cut(s)	460
BmiI	GGNNCC	1 cut(s)	259
BmrFI	CCNGG	1 cut(s)	640
BmsI	GCATC	2 cut(s)	358, 474
BsaAI	YACGTR	3 cut(s)	99, 324, 410
BsaHI	GRCGYC	1 cut(s)	330
BsaI	GGTCTC	1 cut(s)	883
BsaJI	CCNNGG	1 cut(s)	744
BsaWI	WCCGGW	4 cut(s)	190, 254, 260, 559
BsaXI	ACNNNNNCTCC	2 cut(s)	374, 404
Bsc4I	CCNNNNNNNGG	2 cut(s)	969, 1056
Bse118I	RCCGGY	1 cut(s)	128
Bse1I	ACTGG	2 cut(s)	519, 963
BseAI	TCCGGA	1 cut(s)	260
BseBI	CCWGG	1 cut(s)	640
BseDI	CCNNGG	1 cut(s)	744
BseGI	GGATG	6 cut(s)	489, 616, 787, 949, 954, 985
BseLI	CCNNNNNNNGG	2 cut(s)	969, 1056
BseMII	CTCAG	2 cut(s)	927, 1080
BseNI	ACTGG	2 cut(s)	519, 963
BseRI	GAGGAG	3 cut(s)	364, 629, 953
BseSI	GKGCMC	1 cut(s)	447
BseXI	GCAGC	4 cut(s)	72, 790, 1106, 1109
BsgI	GTGCAG	1 cut(s)	362
BshFI	GGCC	3 cut(s)	135, 638, 749
BsiHKCI	CYCGRG	2 cut(s)	845, 1125
BsiSI	CCGG	5 cut(s)	129, 191, 255, 261, 560
BsiWI	CGTACG	1 cut(s)	324
BslI	CCNNNNNNNGG	2 cut(s)	969, 1056
BsmAI	GTCTC	3 cut(s)	19, 268, 883
BsmBI	CGTCTC	2 cut(s)	19, 268
BsnI	GGCC	3 cut(s)	135, 638, 749
Bso31I	GGTCTC	1 cut(s)	883
BsoBI	CYCGRG	2 cut(s)	845, 1125
Bsp1286I	GDGCHC	1 cut(s)	447
Bsp13I	TCCGGA	1 cut(s)	260
Bsp143I	GATC	8 cut(s)	123, 263, 404, 556, 682, 866, 1063, 1111
BspANI	GGCC	3 cut(s)	135, 638, 749
BspCNI	CTCAG	2 cut(s)	928, 1081
BspEI	TCCGGA	1 cut(s)	260
BspLI	GGNNCC	1 cut(s)	259
BspPI	GGATC	6 cut(s)	271, 412, 551, 690, 861, 1071
BspQI	GCTCTTC	1 cut(s)	157
BspTNI	GGTCTC	1 cut(s)	883
BsrBI	CCGCTC	2 cut(s)	380, 624
BsrFI	RCCGGY	1 cut(s)	128
BsrI	ACTGG	2 cut(s)	519, 963
BssAI	RCCGGY	1 cut(s)	128
BssECI	CCNNGG	1 cut(s)	744
BssMI	GATC	8 cut(s)	123, 263, 404, 556, 682, 866, 1063, 1111
BssNI	GRCGYC	1 cut(s)	330
BssT1I	CCWWGG	1 cut(s)	744
Bst2UI	CCWGG	1 cut(s)	640
Bst4CI	ACNGT	5 cut(s)	449, 533, 646, 839, 922
Bst6I	CTCTTC	3 cut(s)	157, 158, 785
BstACI	GRCGYC	1 cut(s)	330
BstBAI	YACGTR	3 cut(s)	99, 324, 410
BstC8I	GCNNGC	2 cut(s)	472, 855
BstDEI	CTNAG	2 cut(s)	936, 1089
BstF5I	GGATG	6 cut(s)	489, 616, 787, 949, 954, 985
BstKTI	GATC	8 cut(s)	126, 266, 407, 559, 685, 869, 1066, 1114
BstMAI	GTCTC	3 cut(s)	19, 268, 883
BstMBI	GATC	8 cut(s)	123, 263, 404, 556, 682, 866, 1063, 1111
BstMWI	GCNNNNNNNGC	5 cut(s)	377, 461, 665, 1106, 1115
BstNI	CCWGG	1 cut(s)	640
BstSCI	CCNGG	1 cut(s)	638
BstSFI	CTRYAG	1 cut(s)	222
BstSLI	GKGCMC	1 cut(s)	447
BstSNI	TACGTA	1 cut(s)	324
BstV1I	GCAGC	4 cut(s)	72, 790, 1106, 1109
BstX2I	RGATCY	2 cut(s)	556, 866
BstYI	RGATCY	2 cut(s)	556, 866
BsuRI	GGCC	3 cut(s)	135, 638, 749
BtrI	CACGTC	1 cut(s)	460
BtsCI	GGATG	6 cut(s)	489, 616, 787, 949, 954, 985
BtsI	GCAGTG	1 cut(s)	513
BtsIMutI	CAGTG	3 cut(s)	513, 970, 1153
Cac8I	GCNNGC	2 cut(s)	472, 855
CaiI	CAGNNNCTG	1 cut(s)	1100
Cfr10I	RCCGGY	1 cut(s)	128
CseI	GACGC	1 cut(s)	319
Csp6I	GTAC	4 cut(s)	80, 94, 321, 325
CviAII	CATG	4 cut(s)	488, 886, 1055, 1067
CviQI	GTAC	4 cut(s)	80, 94, 321, 325
DdeI	CTNAG	2 cut(s)	936, 1089
DpnI	GATC	8 cut(s)	125, 265, 406, 558, 684, 868, 1065, 1113
DpnII	GATC	8 cut(s)	123, 263, 404, 556, 682, 866, 1063, 1111
EaeI	YGGCCR	2 cut(s)	133, 636
Eam1104I	CTCTTC	3 cut(s)	157, 158, 785
EarI	CTCTTC	3 cut(s)	157, 158, 785
EciI	GGCGGA	1 cut(s)	515
Eco105I	TACGTA	1 cut(s)	324
Eco130I	CCWWGG	1 cut(s)	744
Eco31I	GGTCTC	1 cut(s)	883
Eco32I	GATATC	1 cut(s)	903
Eco57I	CTGAAG	1 cut(s)	110
Eco72I	CACGTG	2 cut(s)	99, 410
Eco88I	CYCGRG	2 cut(s)	845, 1125
EcoRI	GAATTC	1 cut(s)	947
EcoRII	CCWGG	1 cut(s)	638
EcoRV	GATATC	1 cut(s)	903
EcoT14I	CCWWGG	1 cut(s)	744
EcoT22I	ATGCAT	1 cut(s)	489
ErhI	CCWWGG	1 cut(s)	744
Esp3I	CGTCTC	2 cut(s)	19, 268
FaeI	CATG	4 cut(s)	491, 889, 1058, 1070
FalI	AAGNNNNNCTT	2 cut(s)	407, 439
FatI	CATG	4 cut(s)	487, 885, 1054, 1066
FauI	CCCGC	2 cut(s)	617, 799
FauNDI	CATATG	1 cut(s)	895
FblI	GTMKAC	1 cut(s)	221
Fnu4HI	GCNGC	8 cut(s)	16, 61, 133, 633, 636, 804, 1095, 1098
FokI	GGATG	6 cut(s)	496, 623, 794, 941, 956, 992
Fsp4HI	GCNGC	8 cut(s)	16, 61, 133, 633, 636, 804, 1095, 1098
FspBI	CTAG	3 cut(s)	756, 1115, 1180
GluI	GCNGC	8 cut(s)	16, 61, 133, 633, 636, 804, 1095, 1098
HaeIII	GGCC	3 cut(s)	135, 638, 749
HapII	CCGG	5 cut(s)	129, 191, 255, 261, 560
HgaI	GACGC	1 cut(s)	319
Hin1I	GRCGYC	1 cut(s)	330
Hin1II	CATG	4 cut(s)	491, 889, 1058, 1070
HinfI	GANTC	2 cut(s)	8, 72
HpaII	CCGG	5 cut(s)	129, 191, 255, 261, 560
Hpy166II	GTNNAC	4 cut(s)	96, 222, 400, 1015
Hpy188I	TCNGA	3 cut(s)	157, 268, 1090
Hpy188III	TCNNGA	3 cut(s)	261, 729, 864
Hpy8I	GTNNAC	4 cut(s)	96, 222, 400, 1015
Hpy99I	CGWCG	1 cut(s)	335
HpyAV	CCTTC	3 cut(s)	103, 309, 349
HpyCH4III	ACNGT	5 cut(s)	449, 533, 646, 839, 922
HpyCH4IV	ACGT	5 cut(s)	98, 323, 409, 459, 1085
HpyCH4V	TGCA	4 cut(s)	343, 371, 474, 487
HpyF10VI	GCNNNNNNNGC	5 cut(s)	377, 461, 665, 1106, 1115
HpyF3I	CTNAG	2 cut(s)	936, 1089
HpySE526I	ACGT	5 cut(s)	98, 323, 409, 459, 1085
Hsp92I	GRCGYC	1 cut(s)	330
Hsp92II	CATG	4 cut(s)	491, 889, 1058, 1070
Kpn2I	TCCGGA	1 cut(s)	260
Kzo9I	GATC	8 cut(s)	123, 263, 404, 556, 682, 866, 1063, 1111
LguI	GCTCTTC	1 cut(s)	157
Lsp1109I	GCAGC	4 cut(s)	72, 790, 1106, 1109
LweI	GCATC	2 cut(s)	358, 474
MaeI	CTAG	3 cut(s)	756, 1115, 1180
MaeII	ACGT	5 cut(s)	98, 323, 409, 459, 1085
MaeIII	GTNAC	6 cut(s)	673, 758, 875, 916, 922, 1076
MalI	GATC	8 cut(s)	125, 265, 406, 558, 684, 868, 1065, 1113
MbiI	CCGCTC	2 cut(s)	380, 624
MboI	GATC	8 cut(s)	123, 263, 404, 556, 682, 866, 1063, 1111
MboII	GAAGA	4 cut(s)	144, 175, 377, 802
MfeI	CAATTG	1 cut(s)	823
MflI	RGATCY	2 cut(s)	556, 866
MhlI	GDGCHC	1 cut(s)	447
MluCI	AATT	5 cut(s)	700, 795, 823, 947, 1044
MlyI	GAGTC	2 cut(s)	17, 66
Mph1103I	ATGCAT	1 cut(s)	489
MroI	TCCGGA	1 cut(s)	260
MseI	TTAA	2 cut(s)	195, 525
MslI	CAYNNNNRTG	1 cut(s)	1148
MspA1I	CMGCKG	1 cut(s)	1100
MspI	CCGG	5 cut(s)	129, 191, 255, 261, 560
MspR9I	CCNGG	1 cut(s)	640
MunI	CAATTG	1 cut(s)	823
MvaI	CCWGG	1 cut(s)	640
MwoI	GCNNNNNNNGC	5 cut(s)	377, 461, 665, 1106, 1115
NdeI	CATATG	1 cut(s)	895
NdeII	GATC	8 cut(s)	123, 263, 404, 556, 682, 866, 1063, 1111
NlaIII	CATG	4 cut(s)	491, 889, 1058, 1070
NlaIV	GGNNCC	1 cut(s)	259
NmuCI	GTSAC	6 cut(s)	673, 758, 875, 916, 922, 1076
NsiI	ATGCAT	1 cut(s)	489
PciSI	GCTCTTC	1 cut(s)	157
PcsI	WCGNNNNNNNCGW	1 cut(s)	104
Pfl23II	CGTACG	1 cut(s)	324
PflFI	GACNNNGTC	1 cut(s)	236
PkrI	GCNGC	8 cut(s)	17, 62, 134, 634, 637, 805, 1096, 1099
PleI	GAGTC	2 cut(s)	16, 66
PmaCI	CACGTG	2 cut(s)	99, 410
PmlI	CACGTG	2 cut(s)	99, 410
PpsI	GAGTC	2 cut(s)	16, 66
Ppu21I	YACGTR	3 cut(s)	99, 324, 410
PshBI	ATTAAT	1 cut(s)	525
Psp6I	CCWGG	1 cut(s)	638
PspCI	CACGTG	2 cut(s)	99, 410
PspGI	CCWGG	1 cut(s)	638
PspLI	CGTACG	1 cut(s)	324
PspN4I	GGNNCC	1 cut(s)	259
PsrI	GAACNNNNNNTAC	2 cut(s)	241, 273
PstNI	CAGNNNCTG	1 cut(s)	1100
PsuI	RGATCY	2 cut(s)	556, 866
PsyI	GACNNNGTC	1 cut(s)	236
PvuII	CAGCTG	1 cut(s)	1100
RsaI	GTAC	4 cut(s)	81, 95, 322, 326
RsaNI	GTAC	4 cut(s)	80, 94, 321, 325
RseI	CAYNNNNRTG	1 cut(s)	1148
SapI	GCTCTTC	1 cut(s)	157
SaqAI	TTAA	2 cut(s)	195, 525
SatI	GCNGC	8 cut(s)	16, 61, 133, 633, 636, 804, 1095, 1098
Sau3AI	GATC	8 cut(s)	123, 263, 404, 556, 682, 866, 1063, 1111
SchI	GAGTC	2 cut(s)	17, 66
ScrFI	CCNGG	1 cut(s)	640
SduI	GDGCHC	1 cut(s)	447
SfaNI	GCATC	2 cut(s)	358, 474
SfcI	CTRYAG	1 cut(s)	222
SgrAI	CRCCGGYG	1 cut(s)	128
SmiMI	CAYNNNNRTG	1 cut(s)	1148
SnaBI	TACGTA	1 cut(s)	324
Sse9I	AATT	5 cut(s)	700, 795, 823, 947, 1044
SspMI	CTAG	3 cut(s)	756, 1115, 1180
StyD4I	CCNGG	1 cut(s)	638
StyI	CCWWGG	1 cut(s)	744
TaaI	ACNGT	5 cut(s)	449, 533, 646, 839, 922
TaiI	ACGT	5 cut(s)	101, 326, 412, 462, 1088
TaqI	TCGA	5 cut(s)	45, 114, 245, 728, 989
TasI	AATT	5 cut(s)	700, 795, 823, 947, 1044
TatI	WGTACW	1 cut(s)	93
TauI	GCSGC	4 cut(s)	18, 135, 635, 638
Tru1I	TTAA	2 cut(s)	195, 525
Tru9I	TTAA	2 cut(s)	195, 525
TscAI	CASTG	3 cut(s)	513, 970, 1153
TseFI	GTSAC	6 cut(s)	673, 758, 875, 916, 922, 1076
TseI	GCWGC	4 cut(s)	60, 803, 1094, 1097
Tsp45I	GTSAC	6 cut(s)	673, 758, 875, 916, 922, 1076
TspDTI	ATGAA	1 cut(s)	960
TspGWI	ACGGA	4 cut(s)	292, 417, 535, 692
TspRI	CASTG	3 cut(s)	513, 970, 1153
Tth111I	GACNNNGTC	1 cut(s)	236
VspI	ATTAAT	1 cut(s)	525
XapI	RAATTY	2 cut(s)	947, 1044
XmiI	GTMKAC	1 cut(s)	221
XspI	CTAG	3 cut(s)	756, 1115, 1180
Zsp2I	ATGCAT	1 cut(s)	489

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.