pycom01g23030

phosphatase 2c

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
20464574 .. 20468874
4301 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g23030.3

Sequence Viewer

Length: 1149 bp
ATGAATGGAAAGATGAGACGACAGAGCTTCGTCATCGAAACCAAGAATGCCCGGCGACAGCGACTCAGAGTCCGACGACTGAAATACACGTGTCAGGCGAAGAAGATCCAGGTGCAGATCACTGGCGGCAGCGGCCAGAAACATGCTTCCGAAGATTGCAAGACATTGGAGTTGAAGGAACGAGAGAAAGATGTTGGGAGTTCAGTGGAGATATTGTCGGTGTCATTTTCAGCATCGAAAAATGACGTCGTGTTGTCCAGTGGATCCGTGACCGGATCAGATGAAGGCGGAGAGAAAAGGAGCGGTGAGGGTTCGGAAGAGAGGGGAGGGTGTGGCATCGTCTCGGTGAAGGGGATGAGGAAGGAGATGGAAGATGCAGTGACAGCGGAGGTAGGGTTTGGGAAGTTTGACTTTTACGGGGTGTATGACGGGCACGGTGGGCCTGACGTGGCCGGGGCTTGTAGGGAGAGGATGCATGAGGTGGTGGCGGAGGCGGTGGAAAAGGAAGGGACTAAAGGTGATGCGATTGATTGGGAGACGGTGATGGAGGGGTGTTTTGAGAAAATGGATGGGGAGGTGAGTGATATTGCAGCGGCAAGGACGGTTGGGGCGACAGCGGTGGTGGCGTTGGTGACGGAGGAGCAGGTGGTGGTGGCCAATTGTGGCGATTCTAGGGCTGTTTTGTCGAGAGGTGGTGTTGCCTTGGCCTTGTCCAATGACCATAAGCCGGACAGAGTGGATGAGTTGAAGAGAATTGAAGCTGCAGGTGGGAGAGTCATCAACTGGAACGGAAGCCGTGTACTTGGGGTGCTTGCCACTTCCAGATCAATAGGTGACCATTACCTGAGGCCATATGTGATATCAAAACCAGAGGTGATGGTGACCAGGCGAACCGACCAGGATGAATTCCTCATCCTTGCCAGTGACGGGCTGTGGGATGTTATATCAAACGACGTAGCATGTCAGGTTGTGAACAAGTGTCTTCGTGGCCGAATGAGGAGAGTATCCATTCACGACGAACATCGTGTTCTCCTAAATGTCGGAAGTCGCACATCCGAGGCAGCAGCAGTCTTGGCTGACCTAGCTATGGCTCGGGGAAGCAGAGATAACGTTAGCGTGATTGTGGTCGACCTCACAAAACCCAGTTAA

Protein Analysis

383

Amino Acids

41.34

Weight (kDa)

6.44

Isoelectric Point (pI)

41.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013722)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 634, 755
AatII GACGTC 1 cut(s) 249
Acc36I ACCTGC 2 cut(s) 634, 755
AccBSI CCGCTC 1 cut(s) 303
AccI GTMKAC 1 cut(s) 1128
AciI CCGC 9 cut(s) 126, 132, 288, 303, 386, 488, 494, 593, 617
AclI AACGTT 1 cut(s) 1110
AclWI GGATC 4 cut(s) 100, 258, 271, 283
AcoI YGGCCR 4 cut(s) 133, 450, 654, 988
AcsI RAATTY 1 cut(s) 905
AcvI CACGTG 1 cut(s) 90
AcyI GRCGYC 1 cut(s) 246
AfaI GTAC 1 cut(s) 801
AfiI CCNNNNNNNGG 3 cut(s) 727, 927, 1087
AflIII ACRYGT 2 cut(s) 87, 89
AgsI TTSAA 3 cut(s) 175, 748, 758
AhdI GACNNNNNGTC 1 cut(s) 68
AjiI CACGTC 1 cut(s) 448
AjnI CCWGG 3 cut(s) 108, 884, 897
AluBI AGCT 3 cut(s) 27, 761, 1085
AluI AGCT 3 cut(s) 27, 761, 1085
Alw26I GTCTC 3 cut(s) 10, 346, 530
AlwI GGATC 4 cut(s) 100, 258, 271, 283
Ama87I CYCGRG 1 cut(s) 1092
AoxI GGCC 7 cut(s) 133, 440, 450, 654, 705, 848, 988
ApeKI GCWGC 5 cut(s) 129, 590, 761, 1061, 1064
ApoI RAATTY 1 cut(s) 905
AspS9I GGNCC 1 cut(s) 440
AsuC2I CCSGG 2 cut(s) 52, 454
AsuHPI GGTGA 9 cut(s) 317, 358, 530, 553, 589, 643, 845, 886, 892
AvaI CYCGRG 1 cut(s) 1092
AxyI CCTNAGG 1 cut(s) 845
BaeGI GKGCMC 1 cut(s) 435
BalI TGGCCA 1 cut(s) 656
BamHI GGATCC 1 cut(s) 263
BbrPI CACGTG 1 cut(s) 90
BbsI GAAGAC 1 cut(s) 974
BbvI GCAGC 5 cut(s) 141, 602, 748, 1073, 1076
BccI CCATC 4 cut(s) 361, 538, 563, 871
BceAI ACGGC 1 cut(s) 780
BciT130I CCWGG 3 cut(s) 110, 886, 899
BciVI GTATCC 1 cut(s) 1015
BcnI CCSGG 2 cut(s) 52, 454
BcoDI GTCTC 3 cut(s) 10, 346, 530
BfaI CTAG 2 cut(s) 672, 1082
BfmI CTRYAG 1 cut(s) 762
BfuAI ACCTGC 2 cut(s) 634, 755
BfuI GTATCC 1 cut(s) 1015
BisI GCNGC 8 cut(s) 127, 130, 133, 591, 594, 762, 1062, 1065
BlsI GCNGC 8 cut(s) 128, 131, 134, 592, 595, 763, 1063, 1066
Bme1390I CCNGG 5 cut(s) 52, 110, 454, 886, 899
BmeRI GACNNNNNGTC 1 cut(s) 68
BmeT110I CYCGRG 1 cut(s) 1092
BmgBI CACGTC 1 cut(s) 448
BmgT120I GGNCC 1 cut(s) 440
BmiI GGNNCC 1 cut(s) 265
BmrFI CCNGG 5 cut(s) 52, 110, 454, 886, 899
BmrI ACTGGG 1 cut(s) 1137
BmsI GCATC 5 cut(s) 242, 345, 364, 462, 511
BmuI ACTGGG 1 cut(s) 1137
BpiI GAAGAC 1 cut(s) 974
BpuMI CCSGG 2 cut(s) 52, 454
BsaAI YACGTR 1 cut(s) 90
BsaHI GRCGYC 1 cut(s) 246
BsaJI CCNNGG 3 cut(s) 453, 702, 1056
BsaWI WCCGGW 1 cut(s) 272
BsaXI ACNNNNNCTCC 4 cut(s) 200, 230, 380, 410
Bsc4I CCNNNNNNNGG 3 cut(s) 727, 927, 1087
Bse1I ACTGG 5 cut(s) 127, 258, 788, 921, 1143
Bse21I CCTNAGG 1 cut(s) 845
BseBI CCWGG 3 cut(s) 110, 886, 899
BseDI CCNNGG 3 cut(s) 453, 702, 1056
BseGI GGATG 8 cut(s) 360, 477, 574, 745, 907, 912, 943, 1052
BseLI CCNNNNNNNGG 3 cut(s) 727, 927, 1087
BseMII CTCAG 2 cut(s) 79, 836
BseNI ACTGG 5 cut(s) 127, 258, 788, 921, 1143
BseRI GAGGAG 2 cut(s) 653, 1012
BseSI GKGCMC 1 cut(s) 435
BseXI GCAGC 5 cut(s) 141, 602, 748, 1073, 1076
BsgI GTGCAG 1 cut(s) 134
BshFI GGCC 7 cut(s) 135, 442, 452, 656, 707, 850, 990
BsiHKCI CYCGRG 1 cut(s) 1092
BsiSI CCGG 4 cut(s) 52, 273, 453, 728
BslFI GGGAC 1 cut(s) 523
BslI CCNNNNNNNGG 3 cut(s) 727, 927, 1087
BsmAI GTCTC 3 cut(s) 10, 346, 530
BsmBI CGTCTC 3 cut(s) 10, 346, 530
BsmFI GGGAC 1 cut(s) 523
BsmI GAATGC 1 cut(s) 52
BsnI GGCC 7 cut(s) 135, 442, 452, 656, 707, 850, 990
BsoBI CYCGRG 1 cut(s) 1092
Bsp1286I GDGCHC 1 cut(s) 435
Bsp143I GATC 5 cut(s) 105, 117, 263, 275, 824
BspACI CCGC 9 cut(s) 126, 132, 288, 303, 386, 488, 494, 593, 617
BspANI GGCC 7 cut(s) 135, 442, 452, 656, 707, 850, 990
BspCNI CTCAG 2 cut(s) 78, 837
BspLI GGNNCC 1 cut(s) 265
BspMAI CTGCAG 1 cut(s) 766
BspMI ACCTGC 2 cut(s) 634, 755
BspPI GGATC 4 cut(s) 100, 258, 271, 283
BsrBI CCGCTC 1 cut(s) 303
BsrI ACTGG 5 cut(s) 127, 258, 788, 921, 1143
BssECI CCNNGG 3 cut(s) 453, 702, 1056
BssMI GATC 5 cut(s) 105, 117, 263, 275, 824
BssNI GRCGYC 1 cut(s) 246
BssT1I CCWWGG 1 cut(s) 702
Bst2UI CCWGG 3 cut(s) 110, 886, 899
Bst4CI ACNGT 3 cut(s) 437, 541, 604
Bst6I CTCTTC 2 cut(s) 312, 743
BstACI GRCGYC 1 cut(s) 246
BstBAI YACGTR 1 cut(s) 90
BstC8I GCNNGC 1 cut(s) 813
BstDEI CTNAG 2 cut(s) 65, 845
BstEII GGTNACC 2 cut(s) 833, 880
BstF5I GGATG 8 cut(s) 360, 477, 574, 745, 907, 912, 943, 1052
BstKTI GATC 5 cut(s) 108, 120, 266, 278, 827
BstMAI GTCTC 3 cut(s) 10, 346, 530
BstMBI GATC 5 cut(s) 105, 117, 263, 275, 824
BstMWI GCNNNNNNNGC 6 cut(s) 132, 383, 439, 623, 1073, 1082
BstNI CCWGG 3 cut(s) 110, 886, 899
BstNSI RCATGY 2 cut(s) 146, 963
BstPI GGTNACC 2 cut(s) 833, 880
BstSCI CCNGG 5 cut(s) 50, 108, 452, 884, 897
BstSFI CTRYAG 1 cut(s) 762
BstSLI GKGCMC 1 cut(s) 435
BstV1I GCAGC 5 cut(s) 141, 602, 748, 1073, 1076
BstV2I GAAGAC 1 cut(s) 974
BstX2I RGATCY 2 cut(s) 105, 263
BstYI RGATCY 2 cut(s) 105, 263
Bsu36I CCTNAGG 1 cut(s) 845
BsuI GTATCC 1 cut(s) 1015
BsuRI GGCC 7 cut(s) 135, 442, 452, 656, 707, 850, 990
BtrI CACGTC 1 cut(s) 448
BtsCI GGATG 8 cut(s) 360, 477, 574, 745, 907, 912, 943, 1052
BtsI GCAGTG 1 cut(s) 384
BtsIMutI CAGTG 5 cut(s) 120, 210, 265, 384, 928
BveI ACCTGC 2 cut(s) 634, 755
Cac8I GCNNGC 1 cut(s) 813
Cfr13I GGNCC 1 cut(s) 440
Csp6I GTAC 1 cut(s) 800
CviAII CATG 3 cut(s) 143, 476, 960
CviQI GTAC 1 cut(s) 800
DdeI CTNAG 2 cut(s) 65, 845
DpnI GATC 5 cut(s) 107, 119, 265, 277, 826
DpnII GATC 5 cut(s) 105, 117, 263, 275, 824
DriI GACNNNNNGTC 1 cut(s) 68
EaeI YGGCCR 4 cut(s) 133, 450, 654, 988
Eam1104I CTCTTC 2 cut(s) 312, 743
Eam1105I GACNNNNNGTC 1 cut(s) 68
EarI CTCTTC 2 cut(s) 312, 743
EciI GGCGGA 2 cut(s) 303, 503
Eco130I CCWWGG 1 cut(s) 702
Eco32I GATATC 1 cut(s) 861
Eco72I CACGTG 1 cut(s) 90
Eco81I CCTNAGG 1 cut(s) 845
Eco88I CYCGRG 1 cut(s) 1092
Eco91I GGTNACC 2 cut(s) 833, 880
EcoO65I GGTNACC 2 cut(s) 833, 880
EcoRI GAATTC 1 cut(s) 905
EcoRII CCWGG 3 cut(s) 108, 884, 897
EcoRV GATATC 1 cut(s) 861
EcoT14I CCWWGG 1 cut(s) 702
EcoT22I ATGCAT 1 cut(s) 477
ErhI CCWWGG 1 cut(s) 702
Esp3I CGTCTC 3 cut(s) 10, 346, 530
FaeI CATG 3 cut(s) 146, 479, 963
FaiI YATR 9 cut(s) 144, 426, 477, 723, 853, 855, 944, 961, 1088
FalI AAGNNNNNCTT 2 cut(s) 395, 427
FaqI GGGAC 1 cut(s) 523
FatI CATG 3 cut(s) 142, 475, 959
FauNDI CATATG 1 cut(s) 853
FblI GTMKAC 1 cut(s) 1128
Fnu4HI GCNGC 8 cut(s) 127, 130, 133, 591, 594, 762, 1062, 1065
FokI GGATG 8 cut(s) 367, 484, 581, 752, 899, 914, 950, 1039
Fsp4HI GCNGC 8 cut(s) 127, 130, 133, 591, 594, 762, 1062, 1065
FspBI CTAG 2 cut(s) 672, 1082
GluI GCNGC 8 cut(s) 127, 130, 133, 591, 594, 762, 1062, 1065
HaeIII GGCC 7 cut(s) 135, 442, 452, 656, 707, 850, 990
HapII CCGG 4 cut(s) 52, 273, 453, 728
Hin1I GRCGYC 1 cut(s) 246
Hin1II CATG 3 cut(s) 146, 479, 963
HincII GTYRAC 1 cut(s) 1129
HindII GTYRAC 1 cut(s) 1129
HinfI GANTC 4 cut(s) 63, 69, 668, 774
HpaII CCGG 4 cut(s) 52, 273, 453, 728
HphI GGTGA 9 cut(s) 317, 358, 530, 553, 589, 643, 845, 886, 892
Hpy166II GTNNAC 3 cut(s) 800, 973, 1129
Hpy188I TCNGA 7 cut(s) 68, 74, 151, 280, 316, 1043, 1057
Hpy188III TCNNGA 3 cut(s) 687, 822, 1013
Hpy8I GTNNAC 3 cut(s) 800, 973, 1129
Hpy99I CGWCG 4 cut(s) 78, 251, 956, 1019
HpyAV CCTTC 5 cut(s) 169, 278, 343, 355, 500
HpyCH4III ACNGT 3 cut(s) 437, 541, 604
HpyCH4IV ACGT 5 cut(s) 89, 246, 447, 954, 1110
HpyCH4V TGCA 6 cut(s) 115, 159, 377, 475, 590, 764
HpyF10VI GCNNNNNNNGC 6 cut(s) 132, 383, 439, 623, 1073, 1082
HpyF3I CTNAG 2 cut(s) 65, 845
HpySE526I ACGT 5 cut(s) 89, 246, 447, 954, 1110
Hsp92I GRCGYC 1 cut(s) 246
Hsp92II CATG 3 cut(s) 146, 479, 963
Kzo9I GATC 5 cut(s) 105, 117, 263, 275, 824
LmnI GCTCC 2 cut(s) 300, 640
Lsp1109I GCAGC 5 cut(s) 141, 602, 748, 1073, 1076
LweI GCATC 5 cut(s) 242, 345, 364, 462, 511
MaeI CTAG 2 cut(s) 672, 1082
MaeII ACGT 5 cut(s) 89, 246, 447, 954, 1110
MaeIII GTNAC 6 cut(s) 268, 379, 631, 833, 880, 923
MalI GATC 5 cut(s) 107, 119, 265, 277, 826
MbiI CCGCTC 1 cut(s) 303
MboI GATC 5 cut(s) 105, 117, 263, 275, 824
MboII GAAGA 7 cut(s) 112, 115, 164, 329, 383, 760, 974
MfeI CAATTG 1 cut(s) 658
MflI RGATCY 2 cut(s) 105, 263
MhlI GDGCHC 1 cut(s) 435
MlsI TGGCCA 1 cut(s) 656
MluCI AATT 3 cut(s) 658, 753, 905
MluNI TGGCCA 1 cut(s) 656
MlyI GAGTC 3 cut(s) 57, 78, 783
MmeI TCCRAC 2 cut(s) 97, 1021
Mox20I TGGCCA 1 cut(s) 656
Mph1103I ATGCAT 1 cut(s) 477
MscI TGGCCA 1 cut(s) 656
MseI TTAA 1 cut(s) 1147
Msp20I TGGCCA 1 cut(s) 656
MspA1I CMGCKG 4 cut(s) 132, 386, 593, 617
MspI CCGG 4 cut(s) 52, 273, 453, 728
MspR9I CCNGG 5 cut(s) 52, 110, 454, 886, 899
MunI CAATTG 1 cut(s) 658
Mva1269I GAATGC 1 cut(s) 52
MvaI CCWGG 3 cut(s) 110, 886, 899
MwoI GCNNNNNNNGC 6 cut(s) 132, 383, 439, 623, 1073, 1082
NciI CCSGG 2 cut(s) 52, 454
NdeI CATATG 1 cut(s) 853
NdeII GATC 5 cut(s) 105, 117, 263, 275, 824
NlaIII CATG 3 cut(s) 146, 479, 963
NlaIV GGNNCC 1 cut(s) 265
NmuCI GTSAC 6 cut(s) 268, 379, 631, 833, 880, 923
NsiI ATGCAT 1 cut(s) 477
NspI RCATGY 2 cut(s) 146, 963
PaqCI CACCTGC 2 cut(s) 634, 755
PcsI WCGNNNNNNNCGW 2 cut(s) 95, 608
PctI GAATGC 1 cut(s) 52
PfeI GAWTC 1 cut(s) 668
PkrI GCNGC 8 cut(s) 128, 131, 134, 592, 595, 763, 1063, 1066
PleI GAGTC 3 cut(s) 57, 77, 782
PmaCI CACGTG 1 cut(s) 90
PmlI CACGTG 1 cut(s) 90
PpsI GAGTC 3 cut(s) 57, 77, 782
Ppu21I YACGTR 1 cut(s) 90
Psp1406I AACGTT 1 cut(s) 1110
Psp6I CCWGG 3 cut(s) 108, 884, 897
PspCI CACGTG 1 cut(s) 90
PspEI GGTNACC 2 cut(s) 833, 880
PspGI CCWGG 3 cut(s) 108, 884, 897
PspN4I GGNNCC 1 cut(s) 265
PspPI GGNCC 1 cut(s) 440
PstI CTGCAG 1 cut(s) 766
PsuI RGATCY 2 cut(s) 105, 263
RsaI GTAC 1 cut(s) 801
RsaNI GTAC 1 cut(s) 800
SalI GTCGAC 1 cut(s) 1127
SaqAI TTAA 1 cut(s) 1147
SatI GCNGC 8 cut(s) 127, 130, 133, 591, 594, 762, 1062, 1065
Sau3AI GATC 5 cut(s) 105, 117, 263, 275, 824
Sau96I GGNCC 1 cut(s) 440
SchI GAGTC 3 cut(s) 57, 78, 783
ScrFI CCNGG 5 cut(s) 52, 110, 454, 886, 899
SduI GDGCHC 1 cut(s) 435
SfaNI GCATC 5 cut(s) 242, 345, 364, 462, 511
SfcI CTRYAG 1 cut(s) 762
Sse9I AATT 3 cut(s) 658, 753, 905
SsiI CCGC 9 cut(s) 126, 132, 288, 303, 386, 488, 494, 593, 617
SspMI CTAG 2 cut(s) 672, 1082
StyD4I CCNGG 5 cut(s) 50, 108, 452, 884, 897
StyI CCWWGG 1 cut(s) 702
TaaI ACNGT 3 cut(s) 437, 541, 604
TaiI ACGT 5 cut(s) 92, 249, 450, 957, 1113
TaqI TCGA 4 cut(s) 36, 236, 686, 1128
TasI AATT 3 cut(s) 658, 753, 905
TatI WGTACW 1 cut(s) 799
TauI GCSGC 3 cut(s) 129, 135, 596
TfiI GAWTC 1 cut(s) 668
Tru1I TTAA 1 cut(s) 1147
Tru9I TTAA 1 cut(s) 1147
TscAI CASTG 5 cut(s) 127, 210, 265, 384, 928
TseFI GTSAC 6 cut(s) 268, 379, 631, 833, 880, 923
TseI GCWGC 5 cut(s) 129, 590, 761, 1061, 1064
Tsp45I GTSAC 6 cut(s) 268, 379, 631, 833, 880, 923
TspDTI ATGAA 3 cut(s) 17, 297, 918
TspGWI ACGGA 3 cut(s) 256, 650, 804
TspRI CASTG 5 cut(s) 127, 210, 265, 384, 928
XapI RAATTY 1 cut(s) 905
XceI RCATGY 2 cut(s) 146, 963
XmiI GTMKAC 1 cut(s) 1128
XspI CTAG 2 cut(s) 672, 1082
ZraI GACGTC 1 cut(s) 247
Zsp2I ATGCAT 1 cut(s) 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.