pycom07g26360

phosphatase 2c

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
26377181 .. 26379888
2708 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g26360.1

Sequence Viewer

Length: 1227 bp
ATGCAATTGAAAAGAAGCCCTTCTTCGAAGAAAAGTAGCCCTTCACTTTCAGGCGGTAGAATGAATGAAAAGATGAGACGACAGAGCTTCGTCATCGAAACCAAGAATGCTCGGCGACAGAGACTCGGAGTCCGGCGACTGAAGTACACGTGTCATACGAAGAATATCCAGGTGAAGATCACCGGTGACGACGACCAGAAACATGCTCCAGAAGATCCTAAGTCATTGGAGCTGAAGAAACAAGAGAAAGATGTTGGGGCTTCGATGGAGATGATGTCGGTGTCTTTTTCGGCATCGGAAAACGAAGTCGTGTTGTCTACTGGGTCCATGGCCGGATCAGATAAAGGAGGACGGAAAAGGGATAGTGAGGGTTTGGAAGCGAGGGGAGGGTACGGCGTCGTATCTGTGAAGGGGATGAGGAAGGAAATGGAAGATGCGGTGAGAGTGGAGGTAGGGTTTGGGAAATTTGACTTTTTCGGGGTGTATGACGGGCACGGTGGGCCCGACGTGGCCGGGGCTTGTAGGGAGAGGATGCATGAGGTGGTGGCAGAGGCGGTGGAAATGGAAGCGATTATAAGTAAAAATGATGACAAAGGTGATGCCATTGATTGGGAGACGGTGATGGATGAGTGTTTTGGTAAAATAGATGGGGAGGTGAGGGATATTGCAGCGGCGAGGATGATTGGGGCGACAGCGGTGGTGGCGGTGGTGACGGAGGAGCAGGTGGTGGTGGCCAATTGTGGTGATTCTAGGGCTGTTTTGTCAAGAGGGGGTGTTGCCTTGGCCTTGTCCAATGATCATAAGCCTGACAGAGTTGATGAGTTGAAGAGAATTGAAGCTGCGGGTGGAAGGGTCATCAATTGGAACGGAAACCGTGTACTCGGTGTGCTCGCCACTTCCAGATCAATAGGTGACCATTACCTGAGGCCATATGTGATATCAAAACCAGAGGTGACGGTGACCAAACGAACCGACCAGGATGAATTCCTCATCCTTGCCAGCGATGGACTGTGGGATGTTATGTCAAACGACGTAGCATGTCAGGTGGTGAAGAAGTGTCTTCATGGCCGAATGAGGAGAGTTTCCATTCATGACGAACATCGGGTTCTCCTAAATGTCCGGAGTCGCACATCCGAGGCAGCAGCAATCTTGGCTGACCTAGCTATGGCTCGGGGAAGCAGAGATAACATTAGTGTGATTGTCGTCGACCTCACAAAAACCAGCTAG

Protein Analysis

409

Amino Acids

44.68

Weight (kDa)

8.12

Isoelectric Point (pI)

47.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PP2C PF00481 130 - 397 4e-62 Protein phosphatase 2C
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0013722)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 575
AarI CACCTGC 1 cut(s) 712
Acc36I ACCTGC 1 cut(s) 712
AccB7I CCANNNNNTGG 1 cut(s) 609
AccI GTMKAC 2 cut(s) 317, 1206
AccIII TCCGGA 1 cut(s) 1119
AciI CCGC 7 cut(s) 54, 437, 554, 671, 695, 704, 842
AclWI GGATC 2 cut(s) 209, 343
AcoI YGGCCR 4 cut(s) 330, 510, 732, 1066
AcsI RAATTY 2 cut(s) 464, 983
AcuI CTGAAG 2 cut(s) 161, 254
AcvI CACGTG 1 cut(s) 150
AcyI GRCGYC 1 cut(s) 396
AfaI GTAC 3 cut(s) 146, 392, 879
AfiI CCNNNNNNNGG 2 cut(s) 609, 1165
AflIII ACRYGT 2 cut(s) 147, 149
AgeI ACCGGT 1 cut(s) 182
AgsI TTSAA 3 cut(s) 10, 826, 836
AhdI GACNNNNNGTC 1 cut(s) 128
AjiI CACGTC 1 cut(s) 508
AjnI CCWGG 2 cut(s) 168, 975
AluBI AGCT 5 cut(s) 87, 232, 839, 1163, 1224
AluI AGCT 5 cut(s) 87, 232, 839, 1163, 1224
Alw21I GWGCWC 1 cut(s) 891
Alw26I GTCTC 3 cut(s) 70, 115, 608
AlwI GGATC 2 cut(s) 209, 343
Ama87I CYCGRG 1 cut(s) 1170
Aor13HI TCCGGA 1 cut(s) 1119
AoxI GGCC 7 cut(s) 330, 500, 510, 732, 783, 926, 1066
ApaI GGGCCC 1 cut(s) 504
ApeKI GCWGC 4 cut(s) 668, 839, 1139, 1142
ApoI RAATTY 2 cut(s) 464, 983
AsiGI ACCGGT 1 cut(s) 182
Asp700I GAANNNNTTC 1 cut(s) 19
AspS9I GGNCC 3 cut(s) 324, 500, 501
AsuC2I CCSGG 1 cut(s) 514
AsuII TTCGAA 1 cut(s) 26
AvaI CYCGRG 1 cut(s) 1170
AvaII GGWCC 1 cut(s) 324
AxyI CCTNAGG 1 cut(s) 923
BaeGI GKGCMC 2 cut(s) 495, 504
BalI TGGCCA 1 cut(s) 734
BanII GRGCYC 1 cut(s) 504
BbrPI CACGTG 1 cut(s) 150
BbsI GAAGAC 1 cut(s) 1052
Bbv12I GWGCWC 1 cut(s) 891
BbvI GCAGC 4 cut(s) 680, 826, 1151, 1154
BccI CCATC 4 cut(s) 259, 616, 641, 998
BceAI ACGGC 1 cut(s) 409
BciT130I CCWGG 2 cut(s) 170, 977
BclI TGATCA 1 cut(s) 796
BcnI CCSGG 1 cut(s) 514
BcoDI GTCTC 3 cut(s) 70, 115, 608
BfaI CTAG 3 cut(s) 750, 1160, 1225
BfuAI ACCTGC 1 cut(s) 712
BisI GCNGC 5 cut(s) 669, 672, 840, 1140, 1143
BlsI GCNGC 5 cut(s) 670, 673, 841, 1141, 1144
Bme1390I CCNGG 3 cut(s) 170, 514, 977
Bme18I GGWCC 1 cut(s) 324
BmeRI GACNNNNNGTC 1 cut(s) 128
BmeT110I CYCGRG 1 cut(s) 1170
BmgBI CACGTC 1 cut(s) 508
BmgT120I GGNCC 3 cut(s) 324, 500, 501
BmiI GGNNCC 2 cut(s) 325, 502
BmrFI CCNGG 3 cut(s) 170, 514, 977
BmrI ACTGGG 1 cut(s) 330
BmsI GCATC 4 cut(s) 302, 424, 522, 589
BmuI ACTGGG 1 cut(s) 330
BpiI GAAGAC 1 cut(s) 1052
BpmI CTGGAG 1 cut(s) 192
Bpu14I TTCGAA 1 cut(s) 26
BpuMI CCSGG 1 cut(s) 514
BsaAI YACGTR 1 cut(s) 150
BsaHI GRCGYC 1 cut(s) 396
BsaJI CCNNGG 4 cut(s) 327, 513, 780, 1134
BsaWI WCCGGW 2 cut(s) 182, 1119
BsaXI ACNNNNNCTCC 4 cut(s) 260, 290, 440, 470
Bsc4I CCNNNNNNNGG 2 cut(s) 609, 1165
Bse118I RCCGGY 1 cut(s) 182
Bse1I ACTGG 1 cut(s) 325
Bse21I CCTNAGG 1 cut(s) 923
BseAI TCCGGA 1 cut(s) 1119
BseBI CCWGG 2 cut(s) 170, 977
BseDI CCNNGG 4 cut(s) 327, 513, 780, 1134
BseGI GGATG 8 cut(s) 420, 537, 631, 684, 985, 990, 1021, 1130
BseLI CCNNNNNNNGG 2 cut(s) 609, 1165
BseMII CTCAG 1 cut(s) 914
BseNI ACTGG 1 cut(s) 325
BseRI GAGGAG 2 cut(s) 731, 1090
BseSI GKGCMC 2 cut(s) 495, 504
BseXI GCAGC 4 cut(s) 680, 826, 1151, 1154
BshFI GGCC 7 cut(s) 332, 502, 512, 734, 785, 928, 1068
BshTI ACCGGT 1 cut(s) 182
BsiHKAI GWGCWC 1 cut(s) 891
BsiHKCI CYCGRG 1 cut(s) 1170
BsiSI CCGG 5 cut(s) 133, 183, 333, 513, 1120
BslI CCNNNNNNNGG 2 cut(s) 609, 1165
BsmAI GTCTC 3 cut(s) 70, 115, 608
BsmBI CGTCTC 2 cut(s) 70, 608
BsmI GAATGC 1 cut(s) 112
BsnI GGCC 7 cut(s) 332, 502, 512, 734, 785, 928, 1068
BsoBI CYCGRG 1 cut(s) 1170
Bsp119I TTCGAA 1 cut(s) 26
Bsp120I GGGCCC 1 cut(s) 500
Bsp1286I GDGCHC 3 cut(s) 495, 504, 891
Bsp13I TCCGGA 1 cut(s) 1119
Bsp143I GATC 5 cut(s) 177, 214, 335, 796, 902
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 7 cut(s) 54, 437, 554, 671, 695, 704, 842
BspANI GGCC 7 cut(s) 332, 502, 512, 734, 785, 928, 1068
BspCNI CTCAG 1 cut(s) 915
BspEI TCCGGA 1 cut(s) 1119
BspHI TCATGA 1 cut(s) 1090
BspLI GGNNCC 2 cut(s) 325, 502
BspMI ACCTGC 1 cut(s) 712
BspPI GGATC 2 cut(s) 209, 343
BspT104I TTCGAA 1 cut(s) 26
BsrFI RCCGGY 1 cut(s) 182
BsrI ACTGG 1 cut(s) 325
BssAI RCCGGY 1 cut(s) 182
BssECI CCNNGG 4 cut(s) 327, 513, 780, 1134
BssMI GATC 5 cut(s) 177, 214, 335, 796, 902
BssNI GRCGYC 1 cut(s) 396
BssT1I CCWWGG 2 cut(s) 327, 780
Bst2UI CCWGG 2 cut(s) 170, 977
Bst4CI ACNGT 5 cut(s) 497, 619, 875, 958, 1011
Bst6I CTCTTC 1 cut(s) 821
BstACI GRCGYC 1 cut(s) 396
BstBAI YACGTR 1 cut(s) 150
BstBI TTCGAA 1 cut(s) 26
BstC8I GCNNGC 2 cut(s) 891, 1000
BstDEI CTNAG 2 cut(s) 219, 923
BstDSI CCRYGG 1 cut(s) 327
BstEII GGTNACC 2 cut(s) 911, 958
BstF5I GGATG 8 cut(s) 420, 537, 631, 684, 985, 990, 1021, 1130
BstKTI GATC 5 cut(s) 180, 217, 338, 799, 905
BstMAI GTCTC 3 cut(s) 70, 115, 608
BstMBI GATC 5 cut(s) 177, 214, 335, 796, 902
BstMWI GCNNNNNNNGC 4 cut(s) 499, 701, 1151, 1160
BstNI CCWGG 2 cut(s) 170, 977
BstNSI RCATGY 2 cut(s) 206, 1041
BstPI GGTNACC 2 cut(s) 911, 958
BstSCI CCNGG 3 cut(s) 168, 512, 975
BstSLI GKGCMC 2 cut(s) 495, 504
BstV1I GCAGC 4 cut(s) 680, 826, 1151, 1154
BstV2I GAAGAC 1 cut(s) 1052
BstX2I RGATCY 1 cut(s) 214
BstYI RGATCY 1 cut(s) 214
Bsu36I CCTNAGG 1 cut(s) 923
BsuRI GGCC 7 cut(s) 332, 502, 512, 734, 785, 928, 1068
BtgI CCRYGG 1 cut(s) 327
BtgZI GCGATG 1 cut(s) 1017
BtrI CACGTC 1 cut(s) 508
BtsCI GGATG 8 cut(s) 420, 537, 631, 684, 985, 990, 1021, 1130
BveI ACCTGC 1 cut(s) 712
Cac8I GCNNGC 2 cut(s) 891, 1000
CciI TCATGA 1 cut(s) 1090
Cfr10I RCCGGY 1 cut(s) 182
Cfr13I GGNCC 3 cut(s) 324, 500, 501
CseI GACGC 1 cut(s) 385
Csp6I GTAC 3 cut(s) 145, 391, 878
CspAI ACCGGT 1 cut(s) 182
CviAII CATG 6 cut(s) 203, 328, 536, 1038, 1064, 1091
CviQI GTAC 3 cut(s) 145, 391, 878
DdeI CTNAG 2 cut(s) 219, 923
DpnI GATC 5 cut(s) 179, 216, 337, 798, 904
DpnII GATC 5 cut(s) 177, 214, 335, 796, 902
DriI GACNNNNNGTC 1 cut(s) 128
EaeI YGGCCR 4 cut(s) 330, 510, 732, 1066
Eam1104I CTCTTC 1 cut(s) 821
Eam1105I GACNNNNNGTC 1 cut(s) 128
EarI CTCTTC 1 cut(s) 821
Eco130I CCWWGG 2 cut(s) 327, 780
Eco24I GRGCYC 1 cut(s) 504
Eco32I GATATC 1 cut(s) 939
Eco47I GGWCC 1 cut(s) 324
Eco57I CTGAAG 2 cut(s) 161, 254
Eco72I CACGTG 1 cut(s) 150
Eco81I CCTNAGG 1 cut(s) 923
Eco88I CYCGRG 1 cut(s) 1170
Eco91I GGTNACC 2 cut(s) 911, 958
EcoO65I GGTNACC 2 cut(s) 911, 958
EcoRI GAATTC 1 cut(s) 983
EcoRII CCWGG 2 cut(s) 168, 975
EcoRV GATATC 1 cut(s) 939
EcoT14I CCWWGG 2 cut(s) 327, 780
EcoT22I ATGCAT 1 cut(s) 537
EcoT38I GRGCYC 1 cut(s) 504
ErhI CCWWGG 2 cut(s) 327, 780
Esp3I CGTCTC 2 cut(s) 70, 608
FaeI CATG 6 cut(s) 206, 331, 539, 1041, 1067, 1094
FalI AAGNNNNNCTT 5 cut(s) 36, 7, 39, 25, 57
FatI CATG 6 cut(s) 202, 327, 535, 1037, 1063, 1090
FauI CCCGC 1 cut(s) 835
FauNDI CATATG 1 cut(s) 931
FbaI TGATCA 1 cut(s) 796
FblI GTMKAC 2 cut(s) 317, 1206
Fnu4HI GCNGC 5 cut(s) 669, 672, 840, 1140, 1143
FokI GGATG 8 cut(s) 427, 544, 638, 691, 977, 992, 1028, 1117
FriOI GRGCYC 1 cut(s) 504
Fsp4HI GCNGC 5 cut(s) 669, 672, 840, 1140, 1143
FspBI CTAG 3 cut(s) 750, 1160, 1225
GluI GCNGC 5 cut(s) 669, 672, 840, 1140, 1143
GsuI CTGGAG 1 cut(s) 192
HaeIII GGCC 7 cut(s) 332, 502, 512, 734, 785, 928, 1068
HapII CCGG 5 cut(s) 133, 183, 333, 513, 1120
HgaI GACGC 1 cut(s) 385
Hin1I GRCGYC 1 cut(s) 396
Hin1II CATG 6 cut(s) 206, 331, 539, 1041, 1067, 1094
HincII GTYRAC 1 cut(s) 1207
HindII GTYRAC 1 cut(s) 1207
HinfI GANTC 4 cut(s) 123, 129, 746, 1123
HpaII CCGG 5 cut(s) 133, 183, 333, 513, 1120
Hpy166II GTNNAC 4 cut(s) 147, 318, 878, 1207
Hpy188I TCNGA 4 cut(s) 128, 298, 340, 1135
Hpy188III TCNNGA 5 cut(s) 209, 765, 900, 1091, 1120
Hpy8I GTNNAC 4 cut(s) 147, 318, 878, 1207
Hpy99I CGWCG 5 cut(s) 194, 401, 509, 1034, 1208
HpyAV CCTTC 5 cut(s) 30, 51, 403, 415, 843
HpyCH4III ACNGT 5 cut(s) 497, 619, 875, 958, 1011
HpyCH4IV ACGT 3 cut(s) 149, 507, 1032
HpyCH4V TGCA 3 cut(s) 4, 535, 668
HpyF10VI GCNNNNNNNGC 4 cut(s) 499, 701, 1151, 1160
HpyF3I CTNAG 2 cut(s) 219, 923
HpySE526I ACGT 3 cut(s) 149, 507, 1032
Hsp92I GRCGYC 1 cut(s) 396
Hsp92II CATG 6 cut(s) 206, 331, 539, 1041, 1067, 1094
Kpn2I TCCGGA 1 cut(s) 1119
Ksp22I TGATCA 1 cut(s) 796
Kzo9I GATC 5 cut(s) 177, 214, 335, 796, 902
LmnI GCTCC 3 cut(s) 211, 229, 718
Lsp1109I GCAGC 4 cut(s) 680, 826, 1151, 1154
LweI GCATC 4 cut(s) 302, 424, 522, 589
MaeI CTAG 3 cut(s) 750, 1160, 1225
MaeII ACGT 3 cut(s) 149, 507, 1032
MaeIII GTNAC 5 cut(s) 185, 709, 911, 952, 958
MalI GATC 5 cut(s) 179, 216, 337, 798, 904
MboI GATC 5 cut(s) 177, 214, 335, 796, 902
MfeI CAATTG 3 cut(s) 5, 736, 859
MflI RGATCY 1 cut(s) 214
MhlI GDGCHC 3 cut(s) 495, 504, 891
MlsI TGGCCA 1 cut(s) 734
MluCI AATT 6 cut(s) 5, 464, 736, 831, 859, 983
MluNI TGGCCA 1 cut(s) 734
MlyI GAGTC 3 cut(s) 117, 138, 1132
Mox20I TGGCCA 1 cut(s) 734
Mph1103I ATGCAT 1 cut(s) 537
MroI TCCGGA 1 cut(s) 1119
MroXI GAANNNNTTC 1 cut(s) 19
MscI TGGCCA 1 cut(s) 734
MslI CAYNNNNRTG 1 cut(s) 1193
Msp20I TGGCCA 1 cut(s) 734
MspA1I CMGCKG 2 cut(s) 671, 695
MspI CCGG 5 cut(s) 133, 183, 333, 513, 1120
MspR9I CCNGG 3 cut(s) 170, 514, 977
MunI CAATTG 3 cut(s) 5, 736, 859
Mva1269I GAATGC 1 cut(s) 112
MvaI CCWGG 2 cut(s) 170, 977
MwoI GCNNNNNNNGC 4 cut(s) 499, 701, 1151, 1160
NciI CCSGG 1 cut(s) 514
NcoI CCATGG 1 cut(s) 327
NdeI CATATG 1 cut(s) 931
NdeII GATC 5 cut(s) 177, 214, 335, 796, 902
NlaIII CATG 6 cut(s) 206, 331, 539, 1041, 1067, 1094
NlaIV GGNNCC 2 cut(s) 325, 502
NmeAIII GCCGAG 1 cut(s) 91
NmuCI GTSAC 5 cut(s) 185, 709, 911, 952, 958
NsiI ATGCAT 1 cut(s) 537
NspI RCATGY 2 cut(s) 206, 1041
NspV TTCGAA 1 cut(s) 26
PagI TCATGA 1 cut(s) 1090
PaqCI CACCTGC 1 cut(s) 712
PcsI WCGNNNNNNNCGW 2 cut(s) 155, 501
PctI GAATGC 1 cut(s) 112
PdmI GAANNNNTTC 1 cut(s) 19
PfeI GAWTC 1 cut(s) 746
PflMI CCANNNNNTGG 1 cut(s) 609
PinAI ACCGGT 1 cut(s) 182
PkrI GCNGC 5 cut(s) 670, 673, 841, 1141, 1144
PleI GAGTC 3 cut(s) 117, 137, 1131
PmaCI CACGTG 1 cut(s) 150
PmlI CACGTG 1 cut(s) 150
PpsI GAGTC 3 cut(s) 117, 137, 1131
Ppu21I YACGTR 1 cut(s) 150
PsiI TTATAA 1 cut(s) 575
Psp6I CCWGG 2 cut(s) 168, 975
PspCI CACGTG 1 cut(s) 150
PspEI GGTNACC 2 cut(s) 911, 958
PspGI CCWGG 2 cut(s) 168, 975
PspN4I GGNNCC 2 cut(s) 325, 502
PspOMI GGGCCC 1 cut(s) 500
PspPI GGNCC 3 cut(s) 324, 500, 501
PsuI RGATCY 1 cut(s) 214
RsaI GTAC 3 cut(s) 146, 392, 879
RsaNI GTAC 3 cut(s) 145, 391, 878
RseI CAYNNNNRTG 1 cut(s) 1193
SalI GTCGAC 1 cut(s) 1205
SatI GCNGC 5 cut(s) 669, 672, 840, 1140, 1143
Sau3AI GATC 5 cut(s) 177, 214, 335, 796, 902
Sau96I GGNCC 3 cut(s) 324, 500, 501
SchI GAGTC 3 cut(s) 117, 138, 1132
ScrFI CCNGG 3 cut(s) 170, 514, 977
SduI GDGCHC 3 cut(s) 495, 504, 891
SfaNI GCATC 4 cut(s) 302, 424, 522, 589
SfuI TTCGAA 1 cut(s) 26
SgrAI CRCCGGYG 1 cut(s) 182
SinI GGWCC 1 cut(s) 324
SmiMI CAYNNNNRTG 1 cut(s) 1193
Sse9I AATT 6 cut(s) 5, 464, 736, 831, 859, 983
SsiI CCGC 7 cut(s) 54, 437, 554, 671, 695, 704, 842
SspMI CTAG 3 cut(s) 750, 1160, 1225
StyD4I CCNGG 3 cut(s) 168, 512, 975
StyI CCWWGG 2 cut(s) 327, 780
TaaI ACNGT 5 cut(s) 497, 619, 875, 958, 1011
TaiI ACGT 3 cut(s) 152, 510, 1035
TaqI TCGA 4 cut(s) 26, 96, 263, 1206
TasI AATT 6 cut(s) 5, 464, 736, 831, 859, 983
TatI WGTACW 2 cut(s) 144, 877
TauI GCSGC 1 cut(s) 674
TfiI GAWTC 1 cut(s) 746
TseFI GTSAC 5 cut(s) 185, 709, 911, 952, 958
TseI GCWGC 4 cut(s) 668, 839, 1139, 1142
Tsp45I GTSAC 5 cut(s) 185, 709, 911, 952, 958
TspDTI ATGAA 5 cut(s) 77, 81, 996, 1052, 1079
TspGWI ACGGA 3 cut(s) 367, 728, 882
Van91I CCANNNNNTGG 1 cut(s) 609
VpaK11BI GGWCC 1 cut(s) 324
XapI RAATTY 2 cut(s) 464, 983
XceI RCATGY 2 cut(s) 206, 1041
XmiI GTMKAC 2 cut(s) 317, 1206
XmnI GAANNNNTTC 1 cut(s) 19
XspI CTAG 3 cut(s) 750, 1160, 1225
Zsp2I ATGCAT 1 cut(s) 537
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.