Transcription factor Pcc1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53045 |
| fragaria_vesca | FvH4_7g31970 FvH4_7g31970 FvH4_7g31970 |
| malus_domestica | MD01G1222500.v1.1 MD07G1293100.v1.1 |
| prunus_persica | Prupe.2G312900_v2.0.a1 Prupe.2G312900_v2.0.a1 |
| pyrus_communis | pycom01g23190 pycom07g26610 |
| rosa_chinensis | RchiOBHm_Chr1g0381471 |
| rosa_roxburghii | Rroxscaffold_4G00278640 |
| rosa_rugosa | Rorug01G0428700 |
| rosa_samantha | Rh1AG452000 Rh1BG409200 Rh1CG423700 Rh1DG440500 |
| rosa_wichuraiana | Rw1G039450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 31 |
| AcsI | RAATTY | 2 cut(s) | 47, 275 |
| AfeI | AGCGCT | 1 cut(s) | 91 |
| AgsI | TTSAA | 1 cut(s) | 272 |
| AluBI | AGCT | 4 cut(s) | 14, 54, 116, 178 |
| AluI | AGCT | 4 cut(s) | 14, 54, 116, 178 |
| Alw21I | GWGCWC | 1 cut(s) | 189 |
| Alw44I | GTGCAC | 1 cut(s) | 185 |
| Aor51HI | AGCGCT | 1 cut(s) | 91 |
| AoxI | GGCC | 1 cut(s) | 31 |
| ApaLI | GTGCAC | 1 cut(s) | 185 |
| ApeKI | GCWGC | 2 cut(s) | 5, 107 |
| ApoI | RAATTY | 2 cut(s) | 47, 275 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 178 |
| AspLEI | GCGC | 1 cut(s) | 92 |
| AsuHPI | GGTGA | 1 cut(s) | 157 |
| BaeGI | GKGCMC | 1 cut(s) | 189 |
| BalI | TGGCCA | 1 cut(s) | 33 |
| Bbv12I | GWGCWC | 1 cut(s) | 189 |
| BbvI | GCAGC | 1 cut(s) | 119 |
| BccI | CCATC | 1 cut(s) | 23 |
| BfmI | CTRYAG | 1 cut(s) | 9 |
| BfoI | RGCGCY | 1 cut(s) | 93 |
| BisI | GCNGC | 2 cut(s) | 6, 108 |
| BlsI | GCNGC | 2 cut(s) | 7, 109 |
| BmrI | ACTGGG | 1 cut(s) | 34 |
| BmsI | GCATC | 1 cut(s) | 230 |
| BmuI | ACTGGG | 1 cut(s) | 34 |
| Bse1I | ACTGG | 1 cut(s) | 40 |
| BseMII | CTCAG | 1 cut(s) | 72 |
| BseNI | ACTGG | 1 cut(s) | 40 |
| BseSI | GKGCMC | 1 cut(s) | 189 |
| BseXI | GCAGC | 1 cut(s) | 119 |
| BshFI | GGCC | 1 cut(s) | 33 |
| BsiHKAI | GWGCWC | 1 cut(s) | 189 |
| BsnI | GGCC | 1 cut(s) | 33 |
| Bsp1286I | GDGCHC | 1 cut(s) | 189 |
| BspANI | GGCC | 1 cut(s) | 33 |
| BspCNI | CTCAG | 1 cut(s) | 73 |
| BsrI | ACTGG | 1 cut(s) | 40 |
| Bst6I | CTCTTC | 1 cut(s) | 143 |
| BstDEI | CTNAG | 1 cut(s) | 81 |
| BstH2I | RGCGCY | 1 cut(s) | 93 |
| BstHHI | GCGC | 1 cut(s) | 92 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 11, 113, 184, 203 |
| BstSFI | CTRYAG | 1 cut(s) | 9 |
| BstSLI | GKGCMC | 1 cut(s) | 189 |
| BstV1I | GCAGC | 1 cut(s) | 119 |
| BsuRI | GGCC | 1 cut(s) | 33 |
| BtsIMutI | CAGTG | 2 cut(s) | 47, 189 |
| CfoI | GCGC | 1 cut(s) | 92 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 23, 58 |
| CviJI | RGCY | 7 cut(s) | 5, 14, 33, 54, 116, 178, 197 |
| CviKI_1 | RGCY | 7 cut(s) | 5, 14, 33, 54, 116, 178, 197 |
| DdeI | CTNAG | 1 cut(s) | 81 |
| EaeI | YGGCCR | 1 cut(s) | 31 |
| Eam1104I | CTCTTC | 1 cut(s) | 143 |
| EarI | CTCTTC | 1 cut(s) | 143 |
| Eco47III | AGCGCT | 1 cut(s) | 91 |
| EcoRI | GAATTC | 1 cut(s) | 275 |
| FaiI | YATR | 4 cut(s) | 75, 105, 226, 228 |
| Fnu4HI | GCNGC | 2 cut(s) | 6, 108 |
| Fsp4HI | GCNGC | 2 cut(s) | 6, 108 |
| GlaI | GCGC | 1 cut(s) | 91 |
| GluI | GCNGC | 2 cut(s) | 6, 108 |
| HaeII | RGCGCY | 1 cut(s) | 93 |
| HaeIII | GGCC | 1 cut(s) | 33 |
| HhaI | GCGC | 1 cut(s) | 92 |
| Hin6I | GCGC | 1 cut(s) | 90 |
| HinP1I | GCGC | 1 cut(s) | 90 |
| HindIII | AAGCTT | 1 cut(s) | 176 |
| HinfI | GANTC | 1 cut(s) | 77 |
| HphI | GGTGA | 1 cut(s) | 157 |
| Hpy166II | GTNNAC | 1 cut(s) | 187 |
| Hpy188I | TCNGA | 3 cut(s) | 19, 82, 281 |
| Hpy8I | GTNNAC | 1 cut(s) | 187 |
| HpyCH4V | TGCA | 4 cut(s) | 107, 133, 187, 233 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 11, 113, 184, 203 |
| HpyF3I | CTNAG | 1 cut(s) | 81 |
| HspAI | GCGC | 1 cut(s) | 90 |
| LpnPI | CCDG | 2 cut(s) | 53, 150 |
| Lsp1109I | GCAGC | 1 cut(s) | 119 |
| LweI | GCATC | 1 cut(s) | 230 |
| MaeIII | GTNAC | 1 cut(s) | 56 |
| MboII | GAAGA | 3 cut(s) | 160, 206, 284 |
| MfeI | CAATTG | 1 cut(s) | 267 |
| MhlI | GDGCHC | 1 cut(s) | 189 |
| MlsI | TGGCCA | 1 cut(s) | 33 |
| MluCI | AATT | 4 cut(s) | 47, 267, 275, 293 |
| MluNI | TGGCCA | 1 cut(s) | 33 |
| MlyI | GAGTC | 1 cut(s) | 86 |
| MnlI | CCTC | 5 cut(s) | 58, 76, 144, 187, 196 |
| Mox20I | TGGCCA | 1 cut(s) | 33 |
| MroXI | GAANNNNTTC | 1 cut(s) | 178 |
| MscI | TGGCCA | 1 cut(s) | 33 |
| Msp20I | TGGCCA | 1 cut(s) | 33 |
| MunI | CAATTG | 1 cut(s) | 267 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 11, 113, 184, 203 |
| NmuCI | GTSAC | 1 cut(s) | 56 |
| PdmI | GAANNNNTTC | 1 cut(s) | 178 |
| PkrI | GCNGC | 2 cut(s) | 7, 109 |
| PleI | GAGTC | 1 cut(s) | 85 |
| PpsI | GAGTC | 1 cut(s) | 85 |
| SatI | GCNGC | 2 cut(s) | 6, 108 |
| SchI | GAGTC | 1 cut(s) | 86 |
| SduI | GDGCHC | 1 cut(s) | 189 |
| SetI | ASST | 6 cut(s) | 16, 56, 69, 118, 147, 180 |
| SfaNI | GCATC | 1 cut(s) | 230 |
| SfcI | CTRYAG | 1 cut(s) | 9 |
| SgeI | CNNG | 7 cut(s) | 34, 52, 73, 149, 219, 230, 266 |
| Sse9I | AATT | 4 cut(s) | 47, 267, 275, 293 |
| TaqI | TCGA | 1 cut(s) | 217 |
| TasI | AATT | 4 cut(s) | 47, 267, 275, 293 |
| TscAI | CASTG | 2 cut(s) | 47, 189 |
| TseFI | GTSAC | 1 cut(s) | 56 |
| TseI | GCWGC | 2 cut(s) | 5, 107 |
| Tsp45I | GTSAC | 1 cut(s) | 56 |
| TspRI | CASTG | 2 cut(s) | 47, 189 |
| VneI | GTGCAC | 1 cut(s) | 185 |
| XapI | RAATTY | 2 cut(s) | 47, 275 |
| XmnI | GAANNNNTTC | 1 cut(s) | 178 |