Secretory pathway protein Sec39
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24350 AT5G24350 AT5G24350 |
| fragaria_vesca | FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 FvH4_7g32380 |
| malus_domestica | MD01G1225300.v1.1 MD07G1295800.v1.1 |
| prunus_persica | Prupe.2G315300_v2.0.a1 Prupe.2G315300_v2.0.a1 |
| pyrus_communis | pycom01g23370 pycom07g26850 pycom07g26860 |
| rosa_chinensis | RchiOBHm_Chr1g0381961 |
| rosa_laevigata | RLG00000026198 |
| rosa_multiflora | Rmu_sc0010238.1_g000002 Rmu_sc0017430.1_g000002 Rmu_sc0017430.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00278310 |
| rosa_rugosa | Rorug01G0432500 |
| rosa_samantha | Rh1AG455700 Rh1BG412800 Rh1CG427700 Rh1DG445100 |
| rosa_wichuraiana | Rw1G041350 Rw1G041500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 5516 |
| AarI | CACCTGC | 1 cut(s) | 5831 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 2982, 4153, 5852 |
| AatII | GACGTC | 1 cut(s) | 43 |
| Acc36I | ACCTGC | 3 cut(s) | 1800, 5831, 6054 |
| Acc65I | GGTACC | 1 cut(s) | 2881 |
| AccB1I | GGYRCC | 1 cut(s) | 2881 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3839 |
| AccI | GTMKAC | 6 cut(s) | 2974, 4511, 4884, 5148, 5259, 6133 |
| AccII | CGCG | 3 cut(s) | 545, 4557, 7258 |
| AciI | CCGC | 4 cut(s) | 1741, 4196, 5437, 6807 |
| AclWI | GGATC | 8 cut(s) | 548, 677, 690, 860, 2164, 2532, 3377, 7312 |
| AcoI | YGGCCR | 2 cut(s) | 2165, 6804 |
| AcuI | CTGAAG | 4 cut(s) | 644, 1739, 5814, 5871 |
| AcyI | GRCGYC | 1 cut(s) | 40 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 2680, 3061, 3341, 3839, 4296, 4744, 5465, 5675, 6158 |
| AflII | CTTAAG | 1 cut(s) | 5134 |
| AflIII | ACRYGT | 4 cut(s) | 340, 3436, 4926, 7256 |
| AgeI | ACCGGT | 1 cut(s) | 1776 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 39, 3789, 5227 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2436, 2468 |
| Alw21I | GWGCWC | 1 cut(s) | 2732 |
| Alw44I | GTGCAC | 1 cut(s) | 2728 |
| AlwI | GGATC | 8 cut(s) | 548, 677, 690, 860, 2164, 2532, 3377, 7312 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1982, 2996, 3536, 3785 |
| Ama87I | CYCGRG | 1 cut(s) | 4623 |
| AoxI | GGCC | 8 cut(s) | 53, 198, 1653, 2165, 2842, 3552, 3829, 6804 |
| ApaLI | GTGCAC | 1 cut(s) | 2728 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1066, 1098 |
| AseI | ATTAAT | 3 cut(s) | 150, 3767, 6872 |
| AsiGI | ACCGGT | 1 cut(s) | 1776 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1977, 2900, 5314 |
| Asp718I | GGTACC | 1 cut(s) | 2881 |
| AspLEI | GCGC | 4 cut(s) | 1677, 1920, 4557, 5410 |
| AsuNHI | GCTAGC | 1 cut(s) | 928 |
| AvaI | CYCGRG | 1 cut(s) | 4623 |
| AxyI | CCTNAGG | 1 cut(s) | 814 |
| BaeGI | GKGCMC | 2 cut(s) | 2710, 2732 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 5676, 5709 |
| BalI | TGGCCA | 1 cut(s) | 2167 |
| BamHI | GGATCC | 1 cut(s) | 682 |
| BanI | GGYRCC | 1 cut(s) | 2881 |
| BbsI | GAAGAC | 4 cut(s) | 4254, 4551, 5661, 6822 |
| Bbv12I | GWGCWC | 1 cut(s) | 2732 |
| BceAI | ACGGC | 3 cut(s) | 223, 3420, 6765 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2927, 2961 |
| BciVI | GTATCC | 1 cut(s) | 2126 |
| BclI | TGATCA | 4 cut(s) | 4999, 6205, 6220, 6658 |
| BfoI | RGCGCY | 1 cut(s) | 1921 |
| BfrI | CTTAAG | 1 cut(s) | 5134 |
| BfuAI | ACCTGC | 3 cut(s) | 1800, 5831, 6054 |
| BfuI | GTATCC | 1 cut(s) | 2126 |
| BglII | AGATCT | 1 cut(s) | 672 |
| BlpI | GCTNAGC | 1 cut(s) | 5614 |
| BmcAI | AGTACT | 2 cut(s) | 2752, 4477 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 39, 3789, 5227 |
| BmeT110I | CYCGRG | 1 cut(s) | 4623 |
| BmrI | ACTGGG | 4 cut(s) | 60, 3827, 6514, 6625 |
| BmtI | GCTAGC | 1 cut(s) | 932 |
| BmuI | ACTGGG | 4 cut(s) | 60, 3827, 6514, 6625 |
| BpiI | GAAGAC | 4 cut(s) | 4254, 4551, 5661, 6822 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2297, 2329, 3336, 3368 |
| BpmI | CTGGAG | 4 cut(s) | 884, 1420, 3083, 3468 |
| Bpu10I | CCTNAGC | 2 cut(s) | 3252, 5110 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 5614 |
| BpuEI | CTTGAG | 5 cut(s) | 2126, 2837, 5384, 5790, 6736 |
| Bsa29I | ATCGAT | 2 cut(s) | 4088, 5756 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2114, 2541 |
| BsaHI | GRCGYC | 1 cut(s) | 40 |
| BsaI | GGTCTC | 3 cut(s) | 1283, 2022, 5243 |
| BsaWI | WCCGGW | 1 cut(s) | 1776 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 3056, 3086, 4824, 4854, 5042, 5072 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 2680, 3061, 3341, 3839, 4296, 4744, 5465, 5675, 6158 |
| Bse118I | RCCGGY | 1 cut(s) | 1776 |
| Bse21I | CCTNAGG | 1 cut(s) | 814 |
| Bse3DI | GCAATG | 2 cut(s) | 3032, 5562 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2114, 2541 |
| BseCI | ATCGAT | 2 cut(s) | 4088, 5756 |
| BseJI | GATNNNNATC | 2 cut(s) | 2114, 2541 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 2680, 3061, 3341, 3839, 4296, 4744, 5465, 5675, 6158 |
| BseMI | GCAATG | 2 cut(s) | 3032, 5562 |
| BseRI | GAGGAG | 4 cut(s) | 562, 3805, 4864, 6724 |
| BseSI | GKGCMC | 2 cut(s) | 2710, 2732 |
| BseYI | CCCAGC | 2 cut(s) | 3104, 5679 |
| BsgI | GTGCAG | 6 cut(s) | 611, 690, 1841, 4593, 4761, 7241 |
| Bsh1236I | CGCG | 3 cut(s) | 545, 4557, 7258 |
| BshFI | GGCC | 8 cut(s) | 55, 200, 1655, 2167, 2844, 3554, 3831, 6806 |
| BshNI | GGYRCC | 1 cut(s) | 2881 |
| BshTI | ACCGGT | 1 cut(s) | 1776 |
| BshVI | ATCGAT | 2 cut(s) | 4088, 5756 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2732 |
| BsiHKCI | CYCGRG | 1 cut(s) | 4623 |
| BsiSI | CCGG | 2 cut(s) | 1777, 5307 |
| BslFI | GGGAC | 8 cut(s) | 463, 3617, 3796, 4640, 5491, 5805, 6179, 6872 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 2680, 3061, 3341, 3839, 4296, 4744, 5465, 5675, 6158 |
| BsmBI | CGTCTC | 2 cut(s) | 1778, 7247 |
| BsmFI | GGGAC | 8 cut(s) | 463, 3617, 3796, 4640, 5491, 5805, 6179, 6872 |
| BsmI | GAATGC | 3 cut(s) | 1540, 3263, 7080 |
| BsnI | GGCC | 8 cut(s) | 55, 200, 1655, 2167, 2844, 3554, 3831, 6806 |
| Bso31I | GGTCTC | 3 cut(s) | 1283, 2022, 5243 |
| BsoBI | CYCGRG | 1 cut(s) | 4623 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2710, 2732 |
| Bsp1407I | TGTACA | 1 cut(s) | 1984 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 5614 |
| Bsp19I | CCATGG | 4 cut(s) | 3838, 4043, 6152, 7228 |
| Bsp68I | TCGCGA | 1 cut(s) | 545 |
| BspACI | CCGC | 4 cut(s) | 1741, 4196, 5437, 6807 |
| BspANI | GGCC | 8 cut(s) | 55, 200, 1655, 2167, 2844, 3554, 3831, 6806 |
| BspDI | ATCGAT | 2 cut(s) | 4088, 5756 |
| BspFNI | CGCG | 3 cut(s) | 545, 4557, 7258 |
| BspHI | TCATGA | 4 cut(s) | 466, 4359, 5572, 5637 |
| BspMAI | CTGCAG | 3 cut(s) | 2715, 3532, 6051 |
| BspMI | ACCTGC | 3 cut(s) | 1800, 5831, 6054 |
| BspOI | GCTAGC | 1 cut(s) | 932 |
| BspPI | GGATC | 8 cut(s) | 548, 677, 690, 860, 2164, 2532, 3377, 7312 |
| BspQI | GCTCTTC | 2 cut(s) | 4308, 7085 |
| BspT107I | GGYRCC | 1 cut(s) | 2881 |
| BspTI | CTTAAG | 1 cut(s) | 5134 |
| BspTNI | GGTCTC | 3 cut(s) | 1283, 2022, 5243 |
| BsrDI | GCAATG | 2 cut(s) | 3032, 5562 |
| BsrFI | RCCGGY | 1 cut(s) | 1776 |
| BsrGI | TGTACA | 1 cut(s) | 1984 |
| BssAI | RCCGGY | 1 cut(s) | 1776 |
| BssNAI | GTATAC | 2 cut(s) | 4885, 6134 |
| BssNI | GRCGYC | 1 cut(s) | 40 |
| BssT1I | CCWWGG | 8 cut(s) | 1479, 2097, 3838, 4043, 5181, 6152, 6303, 7228 |
| Bst1107I | GTATAC | 2 cut(s) | 4885, 6134 |
| Bst6I | CTCTTC | 5 cut(s) | 2040, 2195, 4236, 4308, 7085 |
| BstACI | GRCGYC | 1 cut(s) | 40 |
| BstAFI | CTTAAG | 1 cut(s) | 5134 |
| BstAUI | TGTACA | 1 cut(s) | 1984 |
| BstDSI | CCRYGG | 4 cut(s) | 3838, 4043, 6152, 7228 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2678 |
| BstFNI | CGCG | 3 cut(s) | 545, 4557, 7258 |
| BstH2I | RGCGCY | 1 cut(s) | 1921 |
| BstHHI | GCGC | 4 cut(s) | 1677, 1920, 4557, 5410 |
| BstNSI | RCATGY | 9 cut(s) | 668, 1050, 3013, 3417, 3440, 4930, 5155, 5414, 6594 |
| BstSLI | GKGCMC | 2 cut(s) | 2710, 2732 |
| BstUI | CGCG | 3 cut(s) | 545, 4557, 7258 |
| BstV2I | GAAGAC | 4 cut(s) | 4254, 4551, 5661, 6822 |
| BstX2I | RGATCY | 4 cut(s) | 672, 682, 2156, 3382 |
| BstYI | RGATCY | 4 cut(s) | 672, 682, 2156, 3382 |
| BstZ17I | GTATAC | 2 cut(s) | 4885, 6134 |
| Bsu15I | ATCGAT | 2 cut(s) | 4088, 5756 |
| Bsu36I | CCTNAGG | 1 cut(s) | 814 |
| BsuI | GTATCC | 1 cut(s) | 2126 |
| BsuRI | GGCC | 8 cut(s) | 55, 200, 1655, 2167, 2844, 3554, 3831, 6806 |
| BsuTUI | ATCGAT | 2 cut(s) | 4088, 5756 |
| BtgI | CCRYGG | 4 cut(s) | 3838, 4043, 6152, 7228 |
| BtsI | GCAGTG | 6 cut(s) | 230, 1365, 2153, 2720, 4605, 6803 |
| BtuMI | TCGCGA | 1 cut(s) | 545 |
| BveI | ACCTGC | 3 cut(s) | 1800, 5831, 6054 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1982, 2996, 3536, 3785 |
| CciI | TCATGA | 4 cut(s) | 466, 4359, 5572, 5637 |
| CfoI | GCGC | 4 cut(s) | 1677, 1920, 4557, 5410 |
| Cfr10I | RCCGGY | 1 cut(s) | 1776 |
| ClaI | ATCGAT | 2 cut(s) | 4088, 5756 |
| CseI | GACGC | 4 cut(s) | 4191, 4904, 7155, 7264 |
| CsiI | ACCWGGT | 1 cut(s) | 2980 |
| CspAI | ACCGGT | 1 cut(s) | 1776 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 2982, 4153, 5852 |
| DriI | GACNNNNNGTC | 3 cut(s) | 39, 3789, 5227 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 2982, 4153, 5852 |
| EaeI | YGGCCR | 2 cut(s) | 2165, 6804 |
| Eam1104I | CTCTTC | 5 cut(s) | 2040, 2195, 4236, 4308, 7085 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 39, 3789, 5227 |
| EarI | CTCTTC | 5 cut(s) | 2040, 2195, 4236, 4308, 7085 |
| Eco130I | CCWWGG | 8 cut(s) | 1479, 2097, 3838, 4043, 5181, 6152, 6303, 7228 |
| Eco31I | GGTCTC | 3 cut(s) | 1283, 2022, 5243 |
| Eco57I | CTGAAG | 4 cut(s) | 644, 1739, 5814, 5871 |
| Eco81I | CCTNAGG | 1 cut(s) | 814 |
| Eco88I | CYCGRG | 1 cut(s) | 4623 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2678 |
| EcoO109I | RGGNCCY | 6 cut(s) | 54, 1653, 3629, 4415, 5338, 5819 |
| EcoT14I | CCWWGG | 8 cut(s) | 1479, 2097, 3838, 4043, 5181, 6152, 6303, 7228 |
| EcoT22I | ATGCAT | 2 cut(s) | 3032, 3730 |
| ErhI | CCWWGG | 8 cut(s) | 1479, 2097, 3838, 4043, 5181, 6152, 6303, 7228 |
| Esp3I | CGTCTC | 2 cut(s) | 1778, 7247 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 1851, 1883, 3903, 3935, 4305, 4337, 5496, 5528 |
| FaqI | GGGAC | 8 cut(s) | 463, 3617, 3796, 4640, 5491, 5805, 6179, 6872 |
| FauNDI | CATATG | 2 cut(s) | 1666, 1993 |
| FbaI | TGATCA | 4 cut(s) | 4999, 6205, 6220, 6658 |
| FblI | GTMKAC | 6 cut(s) | 2974, 4511, 4884, 5148, 5259, 6133 |
| GlaI | GCGC | 4 cut(s) | 1676, 1919, 4556, 5409 |
| GsaI | CCCAGC | 2 cut(s) | 3108, 5683 |
| GsuI | CTGGAG | 4 cut(s) | 884, 1420, 3083, 3468 |
| HaeII | RGCGCY | 1 cut(s) | 1921 |
| HaeIII | GGCC | 8 cut(s) | 55, 200, 1655, 2167, 2844, 3554, 3831, 6806 |
| HapII | CCGG | 2 cut(s) | 1777, 5307 |
| HgaI | GACGC | 4 cut(s) | 4191, 4904, 7155, 7264 |
| HhaI | GCGC | 4 cut(s) | 1677, 1920, 4557, 5410 |
| Hin1I | GRCGYC | 1 cut(s) | 40 |
| Hin6I | GCGC | 4 cut(s) | 1675, 1918, 4555, 5408 |
| HinP1I | GCGC | 4 cut(s) | 1675, 1918, 4555, 5408 |
| HincII | GTYRAC | 6 cut(s) | 769, 2975, 3777, 4603, 5286, 5360 |
| HindII | GTYRAC | 6 cut(s) | 769, 2975, 3777, 4603, 5286, 5360 |
| HindIII | AAGCTT | 4 cut(s) | 2774, 4137, 5948, 6471 |
| HpaII | CCGG | 2 cut(s) | 1777, 5307 |
| Hpy99I | CGWCG | 2 cut(s) | 42, 2976 |
| HpyCH4IV | ACGT | 6 cut(s) | 40, 340, 1787, 2971, 4704, 4756 |
| HpySE526I | ACGT | 6 cut(s) | 40, 340, 1787, 2971, 4704, 4756 |
| Hsp92I | GRCGYC | 1 cut(s) | 40 |
| HspAI | GCGC | 4 cut(s) | 1675, 1918, 4555, 5408 |
| KflI | GGGWCCC | 1 cut(s) | 5819 |
| KpnI | GGTACC | 1 cut(s) | 2885 |
| Ksp22I | TGATCA | 4 cut(s) | 4999, 6205, 6220, 6658 |
| LguI | GCTCTTC | 2 cut(s) | 4308, 7085 |
| MabI | ACCWGGT | 1 cut(s) | 2980 |
| MaeII | ACGT | 6 cut(s) | 40, 340, 1787, 2971, 4704, 4756 |
| MfeI | CAATTG | 5 cut(s) | 3548, 3691, 4401, 4893, 5688 |
| MflI | RGATCY | 4 cut(s) | 672, 682, 2156, 3382 |
| MhlI | GDGCHC | 2 cut(s) | 2710, 2732 |
| MlsI | TGGCCA | 1 cut(s) | 2167 |
| MluI | ACGCGT | 1 cut(s) | 7256 |
| MluNI | TGGCCA | 1 cut(s) | 2167 |
| MmeI | TCCRAC | 6 cut(s) | 1485, 1609, 1761, 6579, 6867, 7287 |
| Mox20I | TGGCCA | 1 cut(s) | 2167 |
| Mph1103I | ATGCAT | 2 cut(s) | 3032, 3730 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1977, 2900, 5314 |
| MscI | TGGCCA | 1 cut(s) | 2167 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1110, 2307, 2919, 3441, 4364, 5160, 7161 |
| Msp20I | TGGCCA | 1 cut(s) | 2167 |
| MspA1I | CMGCKG | 1 cut(s) | 6809 |
| MspCI | CTTAAG | 1 cut(s) | 5134 |
| MspI | CCGG | 2 cut(s) | 1777, 5307 |
| MssI | GTTTAAAC | 1 cut(s) | 5121 |
| MunI | CAATTG | 5 cut(s) | 3548, 3691, 4401, 4893, 5688 |
| Mva1269I | GAATGC | 3 cut(s) | 1540, 3263, 7080 |
| MvnI | CGCG | 3 cut(s) | 545, 4557, 7258 |
| NcoI | CCATGG | 4 cut(s) | 3838, 4043, 6152, 7228 |
| NdeI | CATATG | 2 cut(s) | 1666, 1993 |
| NheI | GCTAGC | 1 cut(s) | 928 |
| NmeAIII | GCCGAG | 1 cut(s) | 2177 |
| NruI | TCGCGA | 1 cut(s) | 545 |
| NsiI | ATGCAT | 2 cut(s) | 3032, 3730 |
| NspI | RCATGY | 9 cut(s) | 668, 1050, 3013, 3417, 3440, 4930, 5155, 5414, 6594 |
| PagI | TCATGA | 4 cut(s) | 466, 4359, 5572, 5637 |
| PaqCI | CACCTGC | 1 cut(s) | 5831 |
| PasI | CCCWGGG | 1 cut(s) | 2009 |
| PciI | ACATGT | 2 cut(s) | 3436, 4926 |
| PciSI | GCTCTTC | 2 cut(s) | 4308, 7085 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 542, 5078 |
| PctI | GAATGC | 3 cut(s) | 1540, 3263, 7080 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1977, 2900, 5314 |
| PflFI | GACNNNGTC | 2 cut(s) | 454, 5660 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3839 |
| PfoI | TCCNGGA | 5 cut(s) | 1431, 3054, 4105, 5856, 6528 |
| PinAI | ACCGGT | 1 cut(s) | 1776 |
| PmeI | GTTTAAAC | 1 cut(s) | 5121 |
| PpuMI | RGGWCCY | 4 cut(s) | 3629, 4415, 5338, 5819 |
| PscI | ACATGT | 2 cut(s) | 3436, 4926 |
| PshBI | ATTAAT | 3 cut(s) | 150, 3767, 6872 |
| PsiI | TTATAA | 1 cut(s) | 5516 |
| Psp5II | RGGWCCY | 4 cut(s) | 3629, 4415, 5338, 5819 |
| PspFI | CCCAGC | 2 cut(s) | 3104, 5679 |
| PspPPI | RGGWCCY | 4 cut(s) | 3629, 4415, 5338, 5819 |
| PstI | CTGCAG | 3 cut(s) | 2715, 3532, 6051 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1982, 2996, 3536, 3785 |
| PsuI | RGATCY | 4 cut(s) | 672, 682, 2156, 3382 |
| PsyI | GACNNNGTC | 2 cut(s) | 454, 5660 |
| RruI | TCGCGA | 1 cut(s) | 545 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1110, 2307, 2919, 3441, 4364, 5160, 7161 |
| SalI | GTCGAC | 1 cut(s) | 2973 |
| SapI | GCTCTTC | 2 cut(s) | 4308, 7085 |
| ScaI | AGTACT | 2 cut(s) | 2752, 4477 |
| SduI | GDGCHC | 2 cut(s) | 2710, 2732 |
| SexAI | ACCWGGT | 1 cut(s) | 2980 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1110, 2307, 2919, 3441, 4364, 5160, 7161 |
| SmlI | CTYRAG | 6 cut(s) | 2141, 2816, 5134, 5363, 5805, 6715 |
| SmoI | CTYRAG | 6 cut(s) | 2141, 2816, 5134, 5363, 5805, 6715 |
| SsiI | CCGC | 4 cut(s) | 1741, 4196, 5437, 6807 |
| SspI | AATATT | 3 cut(s) | 5101, 5381, 5884 |
| StyI | CCWWGG | 8 cut(s) | 1479, 2097, 3838, 4043, 5181, 6152, 6303, 7228 |
| TaiI | ACGT | 6 cut(s) | 43, 343, 1790, 2974, 4707, 4759 |
| TatI | WGTACW | 6 cut(s) | 1984, 2750, 3233, 4475, 6074, 6251 |
| TauI | GCSGC | 1 cut(s) | 6809 |
| TspGWI | ACGGA | 4 cut(s) | 204, 1739, 3697, 5906 |
| Tth111I | GACNNNGTC | 2 cut(s) | 454, 5660 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3839 |
| Vha464I | CTTAAG | 1 cut(s) | 5134 |
| VneI | GTGCAC | 1 cut(s) | 2728 |
| VspI | ATTAAT | 3 cut(s) | 150, 3767, 6872 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2678 |
| XbaI | TCTAGA | 1 cut(s) | 6334 |
| XceI | RCATGY | 9 cut(s) | 668, 1050, 3013, 3417, 3440, 4930, 5155, 5414, 6594 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 5676, 6159 |
| XmiI | GTMKAC | 6 cut(s) | 2974, 4511, 4884, 5148, 5259, 6133 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1977, 2900, 5314 |
| ZraI | GACGTC | 1 cut(s) | 41 |
| ZrmI | AGTACT | 2 cut(s) | 2752, 4477 |
| Zsp2I | ATGCAT | 2 cut(s) | 3032, 3730 |